From 2627123e76ea0f7dfa36c419b362fa85977654e7 Mon Sep 17 00:00:00 2001
From: = <merugopalan2007@gmail.com>
Date: Tue, 16 Jul 2024 15:09:55 -0400
Subject: [PATCH 1/7] Change DOM editing to jQuery and add Dockerfile

---
 Dockerfile                        |  36 +++++++++++++++++++
 annotate.db                       | Bin 0 -> 12288 bytes
 newsentsExample.csv.rankings.json |  56 ++++++++++++++++++++++++++++++
 requirements.txt                  |   5 +--
 settings.cfg                      |   2 +-
 templates/annotate.html           |  55 +++++++++++++++--------------
 templates/edittree.html           |  31 ++++++++++-------
 templates/layout.html             |   2 ++
 8 files changed, 145 insertions(+), 42 deletions(-)
 create mode 100644 Dockerfile
 create mode 100644 annotate.db
 create mode 100644 newsentsExample.csv.rankings.json

diff --git a/Dockerfile b/Dockerfile
new file mode 100644
index 0000000..0e0597b
--- /dev/null
+++ b/Dockerfile
@@ -0,0 +1,36 @@
+FROM python:3.6
+
+RUN echo export PATH=$HOME/.local/bin:$PATH >> ~/.bashrc
+
+COPY requirements.txt requirements.txt
+
+
+RUN apt-get update
+RUN apt-get install -y git
+RUN apt-get install -y make
+RUN apt-get install -y texlive-latex-base
+RUN apt-get install -y texlive-fonts-recommended
+#RUN apt-get install -y texlive-fonts-extra
+RUN git clone --recursive https://github.com/andreasvc/disco-dop.git
+RUN cd disco-dop
+
+
+RUN pip install --user --no-cache-dir -r requirements.txt 
+
+WORKDIR /disco-dop/
+RUN pip install sphinx
+RUN mkdir -p _static
+RUN make install
+RUN pip install grapheme
+
+WORKDIR /home/merug/activedopmeru/
+ENV FLASK_APP=app.py
+ENV FLASK_RUN_HOST=0.0.0.0
+ENV FLASK_ENV=development
+#RUN python -m flask initdb
+#RUN python -m flask initpriorities
+COPY . .
+
+EXPOSE 5000
+
+CMD ["python", "-m", "flask", "run", "--with-threads"]
\ No newline at end of file
diff --git a/annotate.db b/annotate.db
new file mode 100644
index 0000000000000000000000000000000000000000..298943261d1290d823ac3f5ebe60231c137ad7d8
GIT binary patch
literal 12288
zcmeI#F;4<96bJAg8Z{&r*cezkLV_m7FCZEg!lIHmUJCcbhPxj29tq4QemB37gM%#|
zgQ0}QiTs=NdhN@*w!hxer-zYdk}rkL70VmZ6j3B@r4&L$uAaEMExv!c?YP$W50yw<
zJrCo?m#D?xBK~fC9!fwQ0uX=z1Rwwb2tWV=5P$##{$JpI7@fD;?dW69YLXEdwwlVS
zsog&g`s0Bd_wPmnSq;igT}quwrWH$5xVp@;o*VO7rjXh&&B*=<ElaXS<+Pi`mI9;G
z8D&X0WF}N{aFS_ZO18?)Uk2kTO*fwmEzpu;R@2vDqNPktDBBZTC|go6Mycjh?^!Kt
z#}QhJ50tF(#V*#u>Rj2ioYPu%ez|*cYul}NFKcJ5emfG{q_isEGIy&_)RK!$KdH_y
zxvpOPz5c@gQL%qC{R0I85P$##AOHafKmY;|fB*y_0D)r_sQZoK{(r2;i+w==0uX=z
S1Rwwb2tWV=5P$##HUd9Y9k}EG

literal 0
HcmV?d00001

diff --git a/newsentsExample.csv.rankings.json b/newsentsExample.csv.rankings.json
new file mode 100644
index 0000000..79d725e
--- /dev/null
+++ b/newsentsExample.csv.rankings.json
@@ -0,0 +1,56 @@
+[
+    [
+        3,
+        3.6736298275241372,
+        "The girl ate pizza with tomatoes",
+        "id4"
+    ],
+    [
+        1,
+        2.702709644336757,
+        "The girl ate the pizza with a fork",
+        "id2"
+    ],
+    [
+        2,
+        2.5013714625137196,
+        "The girl ate the pizza with the tomatoes",
+        "id3"
+    ],
+    [
+        0,
+        1.6475508327726855,
+        "The boy saw the girl under the tree with the telescope in the forest",
+        "id1"
+    ],
+    [
+        7,
+        0.8895849807473573,
+        "The mouse saw the little cat",
+        "id8"
+    ],
+    [
+        4,
+        -0.0,
+        "The cat saw the pizza",
+        "id5"
+    ],
+    [
+        5,
+        -0.0,
+        "The mouse stole the pizza",
+        "id6"
+    ],
+    [
+        6,
+        -0.0,
+        "The cat ate the mouse",
+        "id7"
+    ],
+    [
+        8,
+        -0.0,
+        "The cat ate the dog",
+        "id9"
+    ]
+]
\ No newline at end of file
diff --git a/requirements.txt b/requirements.txt
index e091441..27bbe9a 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,5 +1,6 @@
-Flask==2.1.0
+Flask==2.0.2
 numpy
 scikit-learn
 pylatexenc
-Werkzeug==2.2.2
+Werkzeug==2.0.2
+Cython==0.29.37
diff --git a/settings.cfg b/settings.cfg
index cca85fd..6839608 100644
--- a/settings.cfg
+++ b/settings.cfg
@@ -1,7 +1,7 @@
 SECRET_KEY=b';boc.xbanuh;qdaoeiq'
 DEBUG = False
 GRAMMAR = 'cgelbank2/'
-SENTENCES = 'ewt-manual.cgelpos'
+SENTENCES = 'newsentsExample.csv'
 LIMIT = 70
 ANNOTATIONHELP = None
 ACCOUNTS = {
diff --git a/templates/annotate.html b/templates/annotate.html
index 8c3ca49..e3c155d 100644
--- a/templates/annotate.html
+++ b/templates/annotate.html
@@ -40,47 +40,48 @@
 		<button id= "reTokenizeButton" onclick="reTokenize()" style="display:none">Re-tokenize</button>
 	</div>
 </form>
-
+{%block script %}
 <script>
-	function makeEditable() {
+	function makeEditable(){
 		event.preventDefault();
-		document.getElementById('editableSent').style.display = "none";
-		document.getElementById('editInput').style.display = "inline";
-		document.getElementById('cancelButton').style.display = "inline";
-		document.getElementById('reTokenizeButton').style.display = "inline";
+		$("#editableSent").hide();
+		$("#editInput").css("display", "inline");
+		$("#cancelButton").css("display", "inline");
+		$("#reTokenizeButton").css("display", "inline");
 	}
 	
-	function cancelEdit() {
+	function cancelEdit(){
 		event.preventDefault();
-		document.getElementById('editableSent').style.display = "inline";
-		document.getElementById('editInput').style.display = "none";
-		document.getElementById('cancelButton').style.display = "none";
-		document.getElementById('reTokenizeButton').style.display = "none";
+		$("#editableSent").css("display", "inline");
+		$("#editInput").hide();
+		$("#cancelButton").hide();
+		$("#reTokenizeButton").hide();
 	}
-	
-	function reTokenize(sentno) {
-		var newtext = document.getElementById('editInput').value;
-		var sentno = document.getElementById('sentno').value;
-		document.getElementById('editableSent').innerText = newtext;
-		document.getElementById('editableSent').style.display = "inline";
-		document.getElementById('editInput').style.display = "none";
-		document.getElementById('cancelButton').style.display = "none";
-		document.getElementById('reTokenizeButton').style.display = "none";
-		fetch('/retokenize', {
+
+	function reTokenize(){
+		var newtext = $("#editInput").val();
+		var sentno = $("#sentno").val();
+		$("#editableSent").text(newtext)
+		$("#editableSent").css("display", "inline");
+		$("#editInput").hide();
+		$("#cancelButton").hide();
+		$("#reTokenizeButton").hide();
+		$.ajax({
 			method: 'POST',
+			url: '/retokenize',
 			headers: {
-				'Content-Type': 'application/json',
+				"Content-Type":'application/json'
 			},
-			body: JSON.stringify({newtext: newtext, sentno: sentno}),
+			data: JSON.stringify({newtext: newtext, sentno: sentno})
+		}).then(data => {
+			console.log('Success', data);
 		})
-		.then(response => response.json())
-		.then(data => console.log('Success:', data))
 		.catch((error) => {
 			console.error('Error:', error);
 		});
-		}
+	}
 </script>
-
+{% endblock %}
 <div style="display: none; " id=constraintdiv>
 	Required: [<span id=showrequire></span>]; Blocked: [<span id=showblock></span>]
 </div>
diff --git a/templates/edittree.html b/templates/edittree.html
index 3bb655e..d744984 100644
--- a/templates/edittree.html
+++ b/templates/edittree.html
@@ -32,34 +32,41 @@
 </div>
 {{ msg }}
 
+{%block script %}
 <script>
+	/*goback() is called by the Go back button, which is passed into this page 
+	from the above jinja {{ msg }} tag */
 	function goback() {
-		var sentno = document.getElementById('sentno').value;
+		var sentno = $('#sentno').val();
 		window.location.href = '/annotate/annotate/' + sentno;
 	}
+	/* undoAccept() undos accept*/
 	function undoAccept() {
-		var sentid = document.getElementById('sentid').value;
-		var sentno = document.getElementById('sentno').value;
-		fetch('/undoaccept', {
+		var sentid = $('#sentid').val();
+		var sentno = $('#sentno').val();
+		$.ajax({
 			method: 'POST',
+			url: '/undoaccept',
 			headers: {
-				'Content-Type': 'application/json',
+				"Content-Type":'application/json'
 			},
-			body: JSON.stringify({sentid: sentid}),
+			data: JSON.stringify({sentid: sentid})
+		}).then(data => {
+			console.log('Success', data);
+			$(location).attr('href') = '/annotate/annotate/' + sentno;
 		})
-		.then(response => response.json())
-		.then(data => {
-			console.log('Success:', data);
-			window.location.href = '/annotate/annotate/' + sentno;
-		}
-		)
 		.then(redirect('/annotate/annotate/1'))
 		.catch((error) => {
 			console.error('Error:', error);
 		});
+
 	}
 </script>
 
+
+
+{% endblock %}
+
 <div id=help style="display: none;">
 	<ul>
 	<li>To change a label, click on a node to select a different label from a list.
diff --git a/templates/layout.html b/templates/layout.html
index 660b046..841feac 100644
--- a/templates/layout.html
+++ b/templates/layout.html
@@ -1,6 +1,8 @@
 <!doctype html>
 <title>Treebank Annotation</title>
 <script src="/annotate/static/script.js"></script>
+<!-- Add jQuery-->
+<script src="https://code.jquery.com/jquery-3.7.1.min.js"></script>
 <link rel=stylesheet type=text/css href="/annotate/static/style.css">
 {%- for message in get_flashed_messages() %}
 <div class=flash>{{ message }}</div>

From 8698fe14f93535a65404fc3c91ca7821fadf4502 Mon Sep 17 00:00:00 2001
From: = <merugopalan2007@gmail.com>
Date: Tue, 16 Jul 2024 20:05:47 -0400
Subject: [PATCH 2/7] July 16th Practice

---
 annotate.db           | Bin 12288 -> 12288 bytes
 app.py                |   3 ++-
 initial30practice.csv |   3 +++
 3 files changed, 5 insertions(+), 1 deletion(-)
 create mode 100644 initial30practice.csv

diff --git a/annotate.db b/annotate.db
index 298943261d1290d823ac3f5ebe60231c137ad7d8..121d92b60c7bd9afc5b900e8193f8f26f8f3ae88 100644
GIT binary patch
literal 12288
zcmeHM&2HO95GF;ZiHI1gnnO_dvalgQD$JIoD9P3-j%^??QiZ7v_fQnZ+S=HxDN-TV
z$lozQVn0EiDesWJLeDwm(Agzvk>b(;lJpl#kk)c$XLk7Q?&puv?!)^YCFoHYO)y1W
z<!eP%l{*M2ic*J5gDX3(L1Q7ifloEpu4>km?|<G|Y`j-$iyxH54~@4~9i?3&AQ6xV
zNCYGT5&?;TL_i`S5s(N-1pYb%Uhb&ZZ!ayWuTCjG^a%-Q<dHc2sBQkVy|K5A_BQU`
z-$tnswRMENF{0!tML`JHneVTHjYS0^@&ZbZNmOv1#Uu*wgp`A5L<H8OW8xo(UBMxV
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zu|+6r!Pzry=CF7~I4KUqT{d^Q#_rkSZ&{FKv7j!yoy)e)9FD-zXO14vH9rh@^|{M6
z9?V982ZfjcbGWYYV>m;9jXBnY$#?<l<zz4cD?N(?uwTTJKa9l@*z_^5Hw%Un0=C(j
z(c6g`{-Yu^WH6xi$mMt30$`%{*37_-Y_Wh94JlfN6|~&x%mNbMD4blHav>ug!WI|A
zBtgR@V1G75X5oEdy)Eam1AvA4Dr?LQn$!skG+$@VKVNI!#cSYeI9CPhz>Xoz8fv?<
z$`f<)H+>41XJBhxkbox<JyIc&XbSQjc$WN>2p%=xKdnsk*rIOy0kXZvri~wu-sm0M
zv>n477*-$I=Fqf<z1~H$*1T13os;vho{*IaWM$`BiF1`*<|<3XRo#ClMR7)(BTYw#
zpEOSS-YgQ0B&Sa#CtH$JTeM5F4g8-ZCp^!>BF>rn?~(7q+64gEuDhfqEyqb#pK+39
zzrLw50rmQaSKp=rigA*ol}O1clTukdf#r*llDSr?kGfarqrXW9nOtpf9R#be$Y~DK
zC|n7RimHZ-m(Ni`o8e@dY7|gGmr`g>)+DuYB_xtH&i{cq#7e5P{!?|5*I*38k}&z0
zAQ@H(k!-hBY|6|n(h2452oneIIvV^e-+0$}+xX*(7a!@82uK7Z0ulj<fJ8tdAQ6xV
pNCYGT5&?;TMBtxC;F|@tr51jM)S3(RmYV-wt=5E2^}<(ee*!RpWYquw

delta 59
xcmZojXh@hKEy&2gz`zW|Fu*ub$C#0EW5N=CCI*4cf(kqMCpI{-ae<`aTmUTf3uXWS

diff --git a/app.py b/app.py
index d8afd34..b6ac110 100644
--- a/app.py
+++ b/app.py
@@ -1133,6 +1133,7 @@ def accept():
 	actions = session['actions']
 	actions[TIME] = int(round(time() - actions[TIME]))
 	treestr = None
+	#tags = {}	
 	if 'dec' in request.args:
 		actions[DECTREE] += int(request.args.get('dec', 0))
 	if 'tree' in request.args:
@@ -1649,4 +1650,4 @@ def strip_cgel_metadata(orig_senttok):
 	treestr = "(ROOT " + cgel_tree.ptb() + ")"
 	treestr = writediscbrackettree(DrawTree(treestr).nodes[0],new_senttok)
 	orig_senttok = new_senttok
-	return(treestr, orig_senttok, tags, orig_tree)
\ No newline at end of file
+	return(treestr, orig_senttok, tags, orig_tree)
diff --git a/initial30practice.csv b/initial30practice.csv
new file mode 100644
index 0000000..f246c21
--- /dev/null
+++ b/initial30practice.csv
@@ -0,0 +1,3 @@
+id sentence
+id1 A closed circuit wire system that only originates programs and does not carry television broadcast signals would not come within the definition
+id2 Whenever there is an actual dispute other than an adversary proceeding before the bankruptcy court the litigation to resolve that dispute is a contested matter
\ No newline at end of file

From bf80bb781f8a62f9554f5f391a27988069be9bbe Mon Sep 17 00:00:00 2001
From: Meru G <68195329+m3ru@users.noreply.github.com>
Date: Mon, 22 Jul 2024 11:03:07 -0400
Subject: [PATCH 3/7] Update Dockerfile

---
 Dockerfile | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 0e0597b..4fbbce3 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -27,10 +27,11 @@ WORKDIR /home/merug/activedopmeru/
 ENV FLASK_APP=app.py
 ENV FLASK_RUN_HOST=0.0.0.0
 ENV FLASK_ENV=development
-#RUN python -m flask initdb
-#RUN python -m flask initpriorities
+
 COPY . .
 
 EXPOSE 5000
+RUN python -m flask initdb
+RUN python -m flask initpriorities
 
-CMD ["python", "-m", "flask", "run", "--with-threads"]
\ No newline at end of file
+CMD ["python", "-m", "flask", "run", "--with-threads"]

From 3e6f6982efb9704fbdc6e212901b49bf5819784e Mon Sep 17 00:00:00 2001
From: = <merugopalan2007@gmail.com>
Date: Mon, 22 Jul 2024 13:44:19 -0400
Subject: [PATCH 4/7] Update python version, fix other things

---
 Dockerfile       |   6 +++---
 annotate.db      | Bin 12288 -> 12288 bytes
 app.py           |   3 +--
 requirements.txt |   4 ++--
 4 files changed, 6 insertions(+), 7 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 4fbbce3..b6c5a91 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-FROM python:3.6
+FROM python:3.9
 
 RUN echo export PATH=$HOME/.local/bin:$PATH >> ~/.bashrc
 
@@ -10,7 +10,7 @@ RUN apt-get install -y git
 RUN apt-get install -y make
 RUN apt-get install -y texlive-latex-base
 RUN apt-get install -y texlive-fonts-recommended
-#RUN apt-get install -y texlive-fonts-extra
+RUN apt-get install -y texlive-latex-extra
 RUN git clone --recursive https://github.com/andreasvc/disco-dop.git
 RUN cd disco-dop
 
@@ -23,7 +23,7 @@ RUN mkdir -p _static
 RUN make install
 RUN pip install grapheme
 
-WORKDIR /home/merug/activedopmeru/
+WORKDIR /home/merug/activedoptest/activedopmeru/
 ENV FLASK_APP=app.py
 ENV FLASK_RUN_HOST=0.0.0.0
 ENV FLASK_ENV=development
diff --git a/annotate.db b/annotate.db
index 121d92b60c7bd9afc5b900e8193f8f26f8f3ae88..39fab85cdc91c279e749184905864afb6a72a4a5 100644
GIT binary patch
delta 59
xcmZojXh@hKEy&Hlz`zW|Fu*=h$C#0OW5N=CCI*4cf(kqMCpI{-ae<`aTmUf(3xEIs

literal 12288
zcmeHM&2HO95GF;ZiHI1gnnO_dvalgQD$JIoD9P3-j%^??QiZ7v_fQnZ+S=HxDN-TV
z$lozQVn0EiDesWJLeDwm(Agzvk>b(;lJpl#kk)c$XLk7Q?&puv?!)^YCFoHYO)y1W
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zNCYGT5&?;TL_i`S5s(N-1pYb%Uhb&ZZ!ayWuTCjG^a%-Q<dHc2sBQkVy|K5A_BQU`
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zh$)^-%V13-Z-S#|=#)G|?F8;slwsS^J4WrR+Z#)&;ss;!G=A*ETm1n(qanXPNayds
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pNCYGT5&?;TMBtxC;F|@tr51jM)S3(RmYV-wt=5E2^}<(ee*!RpWYquw

diff --git a/app.py b/app.py
index ca44af7..e667eab 100644
--- a/app.py
+++ b/app.py
@@ -1294,8 +1294,7 @@ def download_pdf():
 
 	subprocess.run(['pdflatex', '-output-directory', output_dir, os.path.join(output_dir, "file.tex")])
 
-	pdf_path = os.path.join(output_dir, "file.pdf")
-
+	pdf_path = os.path.join(output_dir, "file.pdf")	
 	return send_file(pdf_path, as_attachment=True, attachment_filename='downloaded_file.pdf')
 
 @app.route('/annotate/exportcgeltree')
diff --git a/requirements.txt b/requirements.txt
index 27bbe9a..d53b6b1 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,6 +1,6 @@
-Flask==2.0.2
+Flask==2.1.0
 numpy
 scikit-learn
 pylatexenc
-Werkzeug==2.0.2
+Werkzeug==2.2.2
 Cython==0.29.37

From 605867224729085091ef69e169e875b2ae7740e3 Mon Sep 17 00:00:00 2001
From: = <merugopalan2007@gmail.com>
Date: Mon, 22 Jul 2024 14:01:22 -0400
Subject: [PATCH 5/7] Dockerfile remove redundancies

---
 Dockerfile | 14 --------------
 1 file changed, 14 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index b6c5a91..d4b705d 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,37 +1,23 @@
 FROM python:3.9
-
 RUN echo export PATH=$HOME/.local/bin:$PATH >> ~/.bashrc
-
 COPY requirements.txt requirements.txt
-
-
 RUN apt-get update
-RUN apt-get install -y git
 RUN apt-get install -y make
-RUN apt-get install -y texlive-latex-base
-RUN apt-get install -y texlive-fonts-recommended
 RUN apt-get install -y texlive-latex-extra
 RUN git clone --recursive https://github.com/andreasvc/disco-dop.git
 RUN cd disco-dop
-
-
 RUN pip install --user --no-cache-dir -r requirements.txt 
-
 WORKDIR /disco-dop/
 RUN pip install sphinx
 RUN mkdir -p _static
 RUN make install
 RUN pip install grapheme
-
 WORKDIR /home/merug/activedoptest/activedopmeru/
 ENV FLASK_APP=app.py
 ENV FLASK_RUN_HOST=0.0.0.0
 ENV FLASK_ENV=development
-
 COPY . .
-
 EXPOSE 5000
 RUN python -m flask initdb
 RUN python -m flask initpriorities
-
 CMD ["python", "-m", "flask", "run", "--with-threads"]

From 01788a537d80646265b5e30f0b593a8506a0b0e4 Mon Sep 17 00:00:00 2001
From: = <merugopalan2007@gmail.com>
Date: Mon, 22 Jul 2024 14:02:06 -0400
Subject: [PATCH 6/7] remove extra csv

---
 initial30practice.csv | 3 ---
 1 file changed, 3 deletions(-)
 delete mode 100644 initial30practice.csv

diff --git a/initial30practice.csv b/initial30practice.csv
deleted file mode 100644
index f246c21..0000000
--- a/initial30practice.csv
+++ /dev/null
@@ -1,3 +0,0 @@
-id sentence
-id1 A closed circuit wire system that only originates programs and does not carry television broadcast signals would not come within the definition
-id2 Whenever there is an actual dispute other than an adversary proceeding before the bankruptcy court the litigation to resolve that dispute is a contested matter
\ No newline at end of file

From 0b33a03d11c7d8355723e4937e05496eb24944b6 Mon Sep 17 00:00:00 2001
From: Meru G <68195329+m3ru@users.noreply.github.com>
Date: Mon, 22 Jul 2024 14:04:44 -0400
Subject: [PATCH 7/7] Update Dockerfile

---
 Dockerfile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Dockerfile b/Dockerfile
index d4b705d..6d2a1e7 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -12,7 +12,7 @@ RUN pip install sphinx
 RUN mkdir -p _static
 RUN make install
 RUN pip install grapheme
-WORKDIR /home/merug/activedoptest/activedopmeru/
+WORKDIR ~/activedopmeru/
 ENV FLASK_APP=app.py
 ENV FLASK_RUN_HOST=0.0.0.0
 ENV FLASK_ENV=development