mnnpy: error building wheel

[harleemcmann]

I have successfully been able to install Celligner in both Python and R, however, when attempting to run it, the package mnnpy gives many errors building the wheel. I have tried using brew, cloning the mnnpy repository, I tried using gcc, llvm, lomp, and libomp, all unsuccessful on two different macs and a PC, all with no success at installing mnnpy. Is anyone able to help with this issue?

[ryan-moreno]

Did you find a solution to this? I am running into the same issue. I have tried mac, pc, and linux and also tried fresh python virtual environments within these systems and am unable to successfully install/run Celligner. I get hung up at various points in the installation process, but the farthest I have been able to get is on a Mac where I have gotten to the same point as you, unable to install mnnpy

Update: I finally got Celligner to install and import properly by downgrading to python 3.8 (along with some other small tweaks like removing unused imports that were causing errors in some of the packages this depends on). This was using a mac.

2nd update: The version of celligner published through pypi appears to be out of date. It does not match the code in this repo and I keep running into errors while trying to use celligner. I am trying to use the docker file provided to set up now (which does specify python 3.8)