From b0b8bc2bb3e4125ec36740b8ed1589209b4f4e7f Mon Sep 17 00:00:00 2001 From: bocini Date: Fri, 29 Sep 2023 09:40:19 +0200 Subject: [PATCH 1/2] STANDARD_REGION_BENCHMARKS now includes distinction between macaque and human data --- model_tools/brain_transformation/__init__.py | 9 ++++++++- 1 file changed, 8 insertions(+), 1 deletion(-) diff --git a/model_tools/brain_transformation/__init__.py b/model_tools/brain_transformation/__init__.py index 22a673b..a1800b3 100644 --- a/model_tools/brain_transformation/__init__.py +++ b/model_tools/brain_transformation/__init__.py @@ -11,6 +11,12 @@ 'V2': LazyLoad(FreemanZiembaV2PublicBenchmark), 'V4': LazyLoad(MajajHongV4PublicBenchmark), 'IT': LazyLoad(MajajHongITPublicBenchmark), + 'mV1v': LazyLoad(FreemanZiembaV1PublicBenchmark), + 'mV2v': LazyLoad(FreemanZiembaV2PublicBenchmark), + 'mV4': LazyLoad(MajajHongV4PublicBenchmark), + 'hV1v': LazyLoad(FreemanZiembaV1PublicBenchmark), + 'hV2v': LazyLoad(FreemanZiembaV2PublicBenchmark), + 'hV4': LazyLoad(MajajHongV4PublicBenchmark) } @@ -26,13 +32,14 @@ def __init__(self, identifier, self.layers = layers self.activations_model = activations_model self._visual_degrees = visual_degrees - # region-layer mapping + import pdb; pdb.set_trace() if region_layer_map is None: layer_selection = LayerSelection(model_identifier=identifier, activations_model=activations_model, layers=layers, visual_degrees=visual_degrees) region_layer_map = RegionLayerMap(layer_selection=layer_selection, region_benchmarks=STANDARD_REGION_BENCHMARKS) + region_layer_map['whole_brain'] = layers # neural layer_model = LayerMappedModel(identifier=identifier, activations_model=activations_model, region_layer_map=region_layer_map) From 4c2a9f4e83a784ab45325709749ea42d605d0b33 Mon Sep 17 00:00:00 2001 From: Ernesto Bocini <111696102+ernestoBocini@users.noreply.github.com> Date: Fri, 29 Sep 2023 13:52:22 +0200 Subject: [PATCH 2/2] Update __init__.py removing the pdb trace --- model_tools/brain_transformation/__init__.py | 1 - 1 file changed, 1 deletion(-) diff --git a/model_tools/brain_transformation/__init__.py b/model_tools/brain_transformation/__init__.py index a1800b3..44c0ed9 100644 --- a/model_tools/brain_transformation/__init__.py +++ b/model_tools/brain_transformation/__init__.py @@ -32,7 +32,6 @@ def __init__(self, identifier, self.layers = layers self.activations_model = activations_model self._visual_degrees = visual_degrees - import pdb; pdb.set_trace() if region_layer_map is None: layer_selection = LayerSelection(model_identifier=identifier, activations_model=activations_model, layers=layers,