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add edge support parameter
1 parent 8a7cc43 commit aa30c67

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Lines changed: 1 addition & 2 deletions

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src/netmap/downstream/regulon.py

Lines changed: 1 addition & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -28,9 +28,8 @@
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from collections import Counter
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def select_top_edges(gene_inter_adata, adata, top_per_source=10, col_cluster='leiden_remap', min_reg_size=10, verbose=True, return_copy = False, tf_column=None):
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def select_top_edges(gene_inter_adata, adata, top_per_source=10, col_cluster='leiden_remap', min_reg_size=10, verbose=True, return_copy = False, tf_column=None, min_edge_support = 0.5):
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min_edge_support = 0.5
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clusters = list(np.unique(gene_inter_adata.obs[col_cluster]))
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keep_edges_dict = {}
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