FLAG-X/pyproject.toml at main · bionetslab/FLAG-X · GitHub

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[build-system]
requires = ["hatchling >= 1.26"]
build-backend = "hatchling.build"

[project]
name = "flagx"
version = "0.2.1"
description = "FLow cytometry Automated Gating toolboX"
readme = "README.md"
requires-python = ">=3.10,<3.14"

authors = [
    { name="Paul Martini", email="paul.martini@fau.de" }
]

license = { text = "GNU General Public License v3 (GPLv3)" }

urls = { Homepage = "https://github.com/bionetslab/FLAG-X" }

classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
    "Operating System :: POSIX :: Linux",
]

# dependencies = []

[project.scripts]
flagx = "flagx.cli:cli"

[tool.pixi.workspace]
channels = ["conda-forge"]
platforms = ["linux-64"]

[tool.pixi.dependencies]
python = "*"
numpy = "*"
pandas = "*"
scanpy = "*"
umap-learn = "*"
matplotlib = "*"
pytometry = "*"
flowio = "*"
scikit-learn = "*"
scipy = "*"
numba = "*"
somoclu = "*"
click = "*"
pyyaml = "*"
typing_extensions = "*"

[tool.pixi.pypi-dependencies]
torch = {version = ">=2.0", index="https://download.pytorch.org/whl/cpu"}
flagx = { path = ".", editable = true }