Integration with Manubot?

[lubianat]

Hello,

BioHackrXiv is great, thank you for this project. I wrote a report for a biohackathon (eLifeSprint 2020) and I`m considering submitting it to biohackrxiv.

I`ve written it using the Manubot markdown framework, which is also great. I will probably manually convert it to biohackrxiv-style markdown/submission, but it would be awesome to have both projects integrated somehow.

Not really an issue, but most like sharing an idea :)

[inutano]

Hello @lubianat, thanks for the suggestion! Our converter accepts a markdown file to produce a formatted PDF file using the converter. I'm not familiar with the Manubot framework, but if you think it'd be useful to add a tool on top of the converter, we welcome PR to this repository!
https://github.com/biohackrxiv/bhxiv-gen-pdf

By the way, the BioHackrXiv is currently accepting only the papers from the selected events because of the limitation we have for issuing DOIs as described in this page. I'm sorry it's not on the top page (I'll fix it), but it'd be better to upload it to another server if you wanted to post it urgently.

[ljgarcia]

Hello Tiago, Thanks for your interest in BioHackrXiv. Could you please point us to the main organizer of the e-Life Sprint? We would like to know better what the general interest in publishing with BioHackrXiv is. It is usually better having more than one publication per event and we would want to assess what the expectation wrt e-Life Sprint could be. There might be a chance to get them into BioHackrXiv. Kind regards,

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On Wed, Nov 4, 2020 at 3:45 AM Tazro Inutano Ohta ***@***.***> wrote: Hello @lubianat <https://github.com/lubianat>, thanks for the suggestion! Our converter accepts a markdown file to produce a formatted PDF file using the converter. I'm not familiar with the Manubot framework, but if you think it'd be useful to add a tool on top of the converter, we welcome PR to this repository! https://github.com/biohackrxiv/bhxiv-gen-pdf By the way, the BioHackrXiv is currently accepting only the papers from the selected events because of the limitation we have for issuing DOIs as described in this page <https://guide.biohackrxiv.org/moderation_board.html>. I'm sorry it's not on the top page (I'll fix it), but it'd be better to upload it to another server if you wanted to post it urgently. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#8 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABJNANH55RET3LEZM74AJYTSOC54JANCNFSM4TJGDZUQ> .

[lubianat]

Hello @ljgarcia and @inutano,

Thanks for the answer. I was in the Covid-19 Virtual Biohackathon earlier this year and saw BioHackrXiv, I love the idea. I did not know that the events themselves needed to be associated with BioHackrXiv, my bad.

I'm not a sprint organizer, and I am not sure if they are even aware of BioHackrXiv. The eLife Innovation team heads that effort: This is their website: https://sprint.elifesciences.org
This is their twitter: https://twitter.com/elifeinnovation

I do not think there would be other publications from this event, though. Maybe for 2021?

Best,
Tiago

[ljgarcia]

Dear Tiago, One of the reasons to have supported events is that someone has to accept/reject contributions and we think that should be done by organizers/delegates from the event. We would be interested in having e-Life sprint contributions so we will contact organizers. If they are keen to the idea, even submissions corresponding to this year would go in. Still, I am afraid we cannot tell you when this will be sorted out, we are working on it. Kind regards,

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On Wed, Nov 4, 2020 at 9:56 PM Tiago Lubiana ***@***.***> wrote: Hello @ljgarcia <https://github.com/ljgarcia> and @inutano <https://github.com/inutano>, Thanks for the answer. I was in the Covid-19 Virtual Biohackathon earlier this year and saw BioHackrXiv, I love the idea. I did not know that the events themselves needed to be associated with BioHackrXiv, my bad. I'm not a sprint organizer, and I am not sure if they are even aware of BioHackrXiv. The eLife Innovation team heads that effort: This is their website: https://sprint.elifesciences.org This is their twitter: https://twitter.com/elifeinnovation I do not think there would be other publications from this event, though. Maybe for 2021? Best, Tiago — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#8 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABJNANDG3WPSHVCGRUOBYHDSOG5XTANCNFSM4TJGDZUQ> .