is there any MGE annotation in the output/results files #54
Description
Dear authors,
Thank you very much for developing the useful programming for identifing MGEs.
I ran the test case ("test_workdir.tar.gz") successfully you provided.
I went through "03.results" in the output dir, I couldn't find any summary statitics about the number of each MGE category that MEGfinder identified (how many seqs of TE, IS, and ICEs...)
I am curious about whether MGEfinder providing this information or not in the results files. For example, if I want to know how many IS sequences in the results of MGEfinder, do I need to run ISfinder by input the fasta file generated by MGEfinder in the results dir.
Thank you very much.