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Description
Good afternoon.
I'm failing with installing clustalo on windows. Let's me describe my steps.
First, I wasn't lucky with installing clustal-omega-1.2.1 from sources using cygwin. I could configure & install argtable, but clustal-omega configuration didn't finish successfully telling me it can't find libargtable2 which was supposed to be in /usr/local/lib. I wrote to clustalw team and they sent me these instructions: http://www.blaststation.com/freestuff/en/howtoBuildx64ClustalO.php which really helped and now I seem to have clustal-omega installed.
Now I still can't install clustalo wrapper. Your setup.py> fails with message "Unable to find vcvarsall.bat". When I tried to replace distutils.core.setup by setuptools.setup it tells me it can't find clustal-omega.h which is in /usr/local/include/clustalo and is passed to setup. I thought it was about cygwin used instead of mingw, because cygwin's /usr/local/include is different to mingw's, but the issue remains when I try to perform installation from mingw.
In addition, replacement distutils.core.setup -> setuptools.setup causes error C:\\Program Files (x86)\\Common Files\\Microsoft\\Visual C++ for Python\\9.0\\VC\\Bin\\cl.exe failed with exit status 2.
Am I doing something wrong? Are there any suggestions on how to install clustalo family on windows and use it happily?
Thank you.