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Move TODOs into issues #12

@tsalo

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@tsalo

Several items that need to be completed are currently in the file TODO.md, but they would be easier to track if a separate issue was opened for each item in the list and the file was removed.

For the automated testing, I would recommend aiming for 90% coverage and assigning the coverage issue to a future milestone (e.g., 2.0.0). I'm not sure how to quantify the documentation, but I guess it could be divided by submodule and tracked using a task list.

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