Skip to content

more information on selecting suitable -sz and -st thresholds #67

@mbassalbioinformatics

Description

@mbassalbioinformatics

hi there

is there any more details you can share on how to best set the -sz and -st theresholds for datasets? particularly for lower resolution calls? the documentation says that -sz is set for a 5kb resolution. what about if we want to go smaller? what should we set it to?

the manuscript also defines a sigma-zero and a scales/levels value. should the scales value be adjusted for other datasets? if so how?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions