abdev-benchmark/pytest.ini at main · apathithyan/abdev-benchmark · GitHub

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[pytest]
# Pytest configuration for antibody developability benchmark tests

# Test discovery patterns
python_files = test_*.py
python_classes = Test*
python_functions = test_*

# Paths
testpaths = tests

# Output options
addopts =
    -v
    --tb=short
    --strict-markers
    --color=yes

# Custom markers for selective testing
markers =
    tap_linear: Tests for TAP Linear baseline
    tap_single_features: Tests for TAP Single Features baseline
    aggrescan3d: Tests for Aggrescan3D baseline
    antifold: Tests for AntiFold baseline
    saprot_vh: Tests for Saprot_VH baseline
    deepviscosity: Tests for DeepViscosity baseline
    structure: Tests for directory/file structure
    quality: Tests for data quality
    slow: Tests that may take longer to run

# Warnings
filterwarnings =
    ignore::DeprecationWarning
    ignore::PendingDeprecationWarning

# Coverage options (if pytest-cov is installed)
# Uncomment to enable coverage reporting
# addopts = --cov=model --cov-report=html --cov-report=term