agr_intermine_builder/local.docker-compose.yml at stage · alliance-genome/agr_intermine_builder · GitHub

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version: "3"
services:
  # Main application builder
  intermine_builder:
    container_name: intermine_builder
    build:
      context: ./intermine_builder
      dockerfile: ./intermine_builder.Dockerfile
    user: ${UID:-1000}:${GID:-1000}
    volumes:
      - ./data/mine/dump:/home/intermine/intermine/dump        # Database dumps
      - ./data/mine/configs:/home/intermine/intermine/configs  # Configuration files
      - ./data/mine/alliance:/home/intermine/intermine/alliancemine
    environment:
      # Core settings
      - MINE_NAME=${MINE_NAME:-biotestmine}
      - MINE_REPO_URL=${MINE_REPO_URL:-}
      - IM_DATA_DIR=${IM_DATA_DIR:-DATA_DIR}

      # Memory configuration
      - MEM_OPTS=${MEM_OPTS:-"-Xmx4g -Xms1g"}

      # Repository settings
      - IM_REPO_URL=${IM_REPO_URL:-}
      - IM_REPO_BRANCH=${IM_REPO_BRANCH:-}
    depends_on:
      - postgres
      - solr
      - tomcat
    healthcheck:
      test: ["CMD", "curl", "-f", "http://localhost:8080"]
      interval: 30s
      timeout: 10s
      retries: 3

  postgres:
    container_name: intermine_postgres
    build:
      context: ./postgres
      dockerfile: ./postgres.Dockerfile
    user: ${UID:-1000}:${GID:-1000}
    volumes:
      - ./data/postgres:/var/lib/postgresql/data
    environment:
      - POSTGRES_PASSWORD=${POSTGRES_PASSWORD:-postgres}
    healthcheck:
      test: ["CMD-SHELL", "pg_isready -U postgres"]
      interval: 10s
      timeout: 5s
      retries: 5

  solr:
    container_name: intermine_solr
    build:
      context: ./solr
      dockerfile: ./solr.Dockerfile
    environment:
      - MEM_OPTS=${MEM_OPTS:-"-Xmx2g -Xms1g"}
      - MINE_NAME=${MINE_NAME:-biotestmine}
    user: ${UID:-1000}:${GID:-1000}
    volumes:
      - ./data/solr:/var/solr
    healthcheck:
      test: ["CMD", "curl", "-f", "http://localhost:8983/solr"]
      interval: 30s
      timeout: 10s
      retries: 3

  tomcat:
    container_name: intermine_tomcat
    build:
      context: ./tomcat
      dockerfile: ./tomcat.Dockerfile
    environment:
      - MEM_OPTS=${MEM_OPTS:-"-Xmx1g -Xms500m"}
    ports:
      - ${TOMCAT_HOST_PORT:-9999}:${TOMCAT_PORT:-8080}
    healthcheck:
      test: ["CMD", "curl", "-f", "http://localhost:8080"]
      interval: 30s
      timeout: 10s
      retries: 3