Skip to content

Installation problems #3

@C-MMM

Description

@C-MMM

Hi Alberlab,
PGS is really a nice software and I want to try it on my data. However, when I try to install it with conda as the guidance:
conda create -n PGS python=2.7
conda install numpy scipy pandas h5py matplotlib seaborn
conda config --add channels salilab
conda install imp

It always shows the error that:

LibMambaUnsatisfiableError: Encountered problems while solving:

  • nothing provides hdf5 1.8.15* needed by h5py-2.6.0-np110py27_3

Could not solve for environment specs
The following packages are incompatible
├─ h5py is installable with the potential options
│ ├─ h5py [2.10.0|2.9.0] would require
│ │ └─ hdf5 >=1.10.5,<1.10.6.0a0 with the potential options
│ │ ├─ hdf5 1.10.5, which can be installed;
│ │ ├─ hdf5 1.10.5, which can be installed;
│ │ ├─ hdf5 1.10.5 would require
│ │ │ └─ openmpi >=4.0,<5.0.0a0 , which can be installed;
│ │ └─ hdf5 1.10.5, which can be installed;

Could you help me with this or provide a list for package version for me? Thanks a lot.

Min

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions