msprime_scripts/msprime.yml at master · abwolf/msprime_scripts · GitHub

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name: msprime_scripts
channels:
  - bioconda
  - conda-forge
  - defaults
dependencies:
  - aioeasywebdav=2.2.0=py36_0
  - aiohttp=3.4.4=py36h470a237_0
  - appdirs=1.4.3=py_1
  - asn1crypto=0.24.0=py36_1003
  - async-timeout=3.0.1=py_1000
  - atomicwrites=1.2.1=py_0
  - attrs=18.2.0=py_0
  - bcftools=1.9
  - bcrypt=3.1.4=py36h470a237_0
  - bedtools=2.27.1=he941832_2
  - blas=1.1=openblas
  - boto3=1.7.84=py_0
  - botocore=1.10.84=py_0
  - bzip2=1.0.6=h470a237_2
  - ca-certificates=2019.1.23=0
  - cachetools=2.1.0=py_0
  - cairo=1.14.12=h276e583_5
  - certifi=2019.3.9=py36_0
  - cffi=1.11.5=py36h5e8e0c9_1
  - chardet=3.0.4=py36_1003
  - click=7.0=py36_0
  - configargparse=0.13.0=py_1
  - coverage=4.5.2=py36h7b6447c_0
  - cryptography=2.4.2=py36h1ba5d50_0
  - curl=7.62.0=hbc83047_0
  - datrie=0.7.1=py36h7b6447c_1
  - decorator=4.3.0=py_0
  - docutils=0.14=py36_1001
  - drmaa=0.7.9=py36_0
  - dropbox=7.3.1=py36_0
  - expat=2.2.5=hfc679d8_2
  - filechunkio=1.6=py36_0
  - fontconfig=2.13.1=h65d0f4c_0
  - freetype=2.9.1=h6debe1e_4
  - ftputil=3.2=py36_0
  - gettext=0.19.8.1=h5e8e0c9_1
  - gitdb2=2.0.5=py_0
  - gitpython=2.1.11=py_0
  - glib=2.56.2=h464dc38_1
  - google-auth=1.2.1=py_0
  - google-auth-httplib2=0.0.3=py_2
  - google-cloud-core=0.24.1=py36_0
  - google-cloud-storage=1.1.1=py36_0
  - google-resumable-media=0.0.2=py36_0
  - googleapis-common-protos=1.5.5=py_0
  - graphite2=1.3.13=hfc679d8_0
  - graphviz=2.38.0=h08bfae6_9
  - gsl=2.2.1=blas_openblas_4
  - h5py=2.8.0=py36he5c79e1_5
  - harfbuzz=1.9.0=h04dbb29_1
  - hdf5=1.10.4
  - htslib=1.9=hc238db4_4
  - httplib2=0.12.0=py36_1000
  - icu=58.2=hfc679d8_0
  - idna=2.8=py36_1000
  - idna_ssl=1.1.0=py36_1000
  - jinja2=2.10=py_1
  - jmespath=0.9.3=py_1
  - jpeg=9c=h470a237_1
  - jsonschema=3.0.0a3=py36_1000
  - krb5=1.16.1=h173b8e3_7
  - libcurl=7.62.0=h20c2e04_0
  - libdeflate=1.0=h470a237_0
  - libedit=3.1.20170329=h6b74fdf_2
  - libffi=3.2.1=hd88cf55_4
  - libgcc-ng=8.2.0=hdf63c60_1
  - libgfortran=3.0.0=1
  - libgfortran-ng=7.3.0=hdf63c60_0
  - libiconv=1.15=h470a237_4
  - libopenblas=0.3.3=h5a2b251_3
  - libpng=1.6.36=ha92aebf_0
  - libprotobuf=3.6.1=hd28b015_0
  - libssh2=1.8.0=h1ba5d50_4
  - libstdcxx-ng=8.2.0=hdf63c60_1
  - libtiff=4.0.10=he6b73bb_1
  - libtool=2.4.6=h470a237_2
  - libuuid=2.32.1=h470a237_2
  - libxcb=1.13=h470a237_2
  - libxml2=2.9.8=h422b904_5
  - markupsafe=1.1.0=py36h470a237_0
  - memory_profiler=0.55.0=py36_0
  - more-itertools=4.3.0=py36_1000
  - msprime=0.6.1=py36hcb787e7_1
  - multidict=4.5.2=py36h470a237_0
  - ncurses=6.1=hf484d3e_0
  - networkx=2.2=py_1
  - numpy=1.15.1=py36_blas_openblashd3ea46f_0
  - openblas=0.2.20=8
  - openssl=1.1.1b=h7b6447c_1
  - pandas=0.23.4=py36hf8a1672_0
  - pango=1.40.14=he752989_2
  - paramiko=2.4.2=py36_1000
  - patsy=0.5.1=py36_0
  - pcre=8.41=hfc679d8_3
  - pip=18.1=py36_1000
  - pixman=0.34.0=h470a237_3
  - pluggy=0.8.0=py_0
  - prettytable=0.7.2=py_2
  - protobuf=3.6.1=py36hfc679d8_1
  - psutil=5.4.8=py36h7b6447c_0
  - pthread-stubs=0.4=h470a237_1
  - py=1.7.0=py_0
  - pyasn1=0.4.4=py_1
  - pyasn1-modules=0.0.5=py36_0
  - pybedtools=0.8.0=py36ha92aebf_0
  - pycparser=2.19=py_0
  - pygraphviz=1.3.1=py36_0
  - pynacl=1.3.0=py36h470a237_0
  - pyparsing=2.3.0=py_0
  - pyrsistent=0.14.7=py36h470a237_0
  - pysam=0.15.1=py36h0380709_0
  - pysftp=0.2.9=py36_0
  - pytest=4.0.1=py36_1000
  - pytest-cov=2.6.0=py36_0
  - pytest-mock=1.10.4=py36_0
  - python=3.6.7=h0371630_0
  - python-dateutil=2.7.5=py_0
  - python-irodsclient=0.7.0=py_0
  - pytz=2018.7=py_0
  - pyyaml=3.13=py36h470a237_1
  - ratelimiter=1.2.0=py36_1000
  - readline=7.0=h7b6447c_5
  - requests=2.13.0=py36_0
  - rsa=3.1.4=py36_0
  - s3transfer=0.1.13=py36_1001
  - samtools=1.9=h8ee4bcc_1
  - scipy=1.1.0=py36he2b7bc3_1
  - setuptools=40.6.2=py36_0
  - six=1.11.0=py36_1001
  - smmap2=2.0.5=py_0
  - snakemake=5.4.0=0
  - snakemake-minimal=5.4.0=py_0
  - sqlite=3.25.2=h7b6447c_0
  - statsmodels=0.9.0=py36h035aef0_0
  - svgwrite=1.2.1=py_0
  - tk=8.6.8=hbc83047_0
  - urllib3=1.12=py36_0
  - wheel=0.32.3=py36_0
  - wrapt=1.11.0=py36h470a237_0
  - xmlrunner=1.7.7=py_0
  - xorg-kbproto=1.0.7=h470a237_2
  - xorg-libice=1.0.9=h470a237_4
  - xorg-libsm=1.2.3=h8c8a85c_0
  - xorg-libx11=1.6.6=h470a237_0
  - xorg-libxau=1.0.8=h470a237_6
  - xorg-libxdmcp=1.1.2=h470a237_7
  - xorg-libxext=1.3.3=h470a237_4
  - xorg-libxpm=3.5.12=h470a237_2
  - xorg-libxrender=0.9.10=h470a237_2
  - xorg-libxt=1.1.5=h470a237_2
  - xorg-renderproto=0.11.1=h470a237_2
  - xorg-xextproto=7.3.0=h470a237_2
  - xorg-xproto=7.0.31=h470a237_7
  - xz=5.2.4=h14c3975_4
  - yaml=0.1.7=h470a237_1
  - yarl=1.3.0=py36h470a237_0
  - zlib=1.2.11=ha838bed_2