ann/ann-fixed.py at master · abhirathb/ann · GitHub

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import numpy as np
import sys
#basic constants for run
#this is assuming one hidden layer i.e. a sigmoid layer and a softmax-output layer
num_hidden = 5  #number of units in hidden layer
num_inputs = int(sys.argv[1]) #number of inputs
N = int(sys.argv[2])
eps = float(sys.argv[3])
#.....

#layer variables:
hidden_weights = np.zeros((num_inputs,num_hidden),np.float128)
hidden_biases = np.zeros((num_hidden),np.float128)
output_weights = np.zeros((num_hidden,2),np.float128)
output_biases = np.zeros((2),np.float128)

hidden_weights_grad = np.zeros((num_inputs,num_hidden),np.float128)
hidden_biases_grad = np.zeros((num_hidden),np.float128)
output_weights_grad = np.zeros((num_hidden,2),np.float128)
output_biases_grad = np.zeros((2),np.float128)

hidden_outputs = np.zeros((num_hidden),np.float128)
output_outputs = np.zeros((2),np.float128)
#....

#Sampling Variables:
init_sd_output = 1.0
init_sd_hidden = 1.0
pW = np.random.normal(0,init_sd_output,output_weights.shape)
pB = np.random.normal(0,init_sd_output,output_biases.shape)
pw = np.random.normal(0,init_sd_hidden,hidden_weights.shape)
pb = np.random.normal(0,init_sd_hidden,hidden_biases.shape)
#....


def compute_outputs(hidden_weights, hidden_biases, output_weights, output_biases,inputs):
    h_z = np.dot(inputs,hidden_weights)
    for i in range(len(h_z)):
        h_z[i]+=hidden_biases
        for j in range(len(h_z[i])):
            h_z[i][j] = 1/(1+np.exp(-h_z[i][j]))


    output_outputs = np.dot(h_z,output_weights)


    for i in range(len(output_outputs)):
        output_outputs[i]+=output_biases
        o1 = np.exp(output_outputs[i][0])
        o2 = np.exp(output_outputs[i][1])
        output_outputs[i][0] = o1/(o1+o2)
        output_outputs[i][1] = o2/(o1+o2)


    return h_z,output_outputs

def compute_grads(hidden_weights, hidden_outputs, output_weights,output_outputs,inputs,outputs):
    diff = outputs - output_outputs    #the main difference term

    dB = np.dot(np.ones((1,np.shape(diff)[0])),diff).reshape((output_weights.shape[1],))
    dW = np.dot(hidden_outputs.T,diff)
    bp = np.dot(diff,output_weights.T)
    prod = hidden_outputs*(1-hidden_outputs)
    back = bp*prod
    db = np.dot(np.ones((1,np.shape(back)[0])),back).reshape((hidden_weights.shape[1],))
    dw = np.dot(inputs.T,back)
    return dB,dW,db,dw

def Hamiltonian(outputs, output_outputs,pw,pb,pB,pW):
    log = outputs*np.log(output_outputs)
    log = log.sum()
    k = (pw**2).sum() + (pb**2).sum() + (pW**2).sum() + (pB**2).sum()
    return log,k,log-k

def leap_frog(hw, hb, pw,pb, dw,db, ow,ob,pW,pB,dW,dB,eps,inputs,outputs):
    pw += (eps/2.0)*dw
    pb += (eps/2.0)*db
    pW += (eps/2.0)*dW
    pB += (eps/2.0)*dB

    hw += (eps)*pw
    hb += (eps)*pb
    ow += (eps)*pW
    ob += (eps)*pB

    hz,oo = compute_outputs(hw,hb,ow,ob,inputs)
    dB,dW,db,dw = compute_grads(hw,hz,ow,oo,inputs,outputs)

    pw += (eps/2.0)*dw
    pb += (eps/2.0)*db
    pW += (eps/2.0)*dW
    pB += (eps/2.0)*dB

    return hw,hb,pw,pb,ow,ob,pW,pB


if __name__ == "__main__":
    #:    global hidden_weights, hidden_biases, output_weights, output_biases
    inputs = np.loadtxt('input_files/maf_%d_%d'%(num_inputs,N),dtype=np.float128)
    outputs = np.loadtxt('input_files/hc_%d'%(N),dtype=np.float128)
    #hidden_weights = np.random.normal(0,10,(num_inputs,num_hidden)).astype(np.float128)
    hidden_weights = np.loadtxt('input_files/init_hw')
    hidden_biases += 0.5
    #output_weights += np.random.normal(0,5,(num_hidden,2)).astype(np.float128)
    output_weights += np.loadtxt('input_files/init_ow')
    output_biases += 0.5
#    eps = 0.00001
    hidden_outputs,output_outputs = compute_outputs(hidden_weights,hidden_biases, output_weights, output_biases, inputs)
    dB,dW,db,dW = compute_grads(hidden_weights,hidden_outputs, output_weights, output_outputs, inputs,outputs)
    steps = 2

    for i in range(2):
        print "Step:",(i+1)

        hidden_outputs,output_outputs = compute_outputs(hidden_weights,hidden_biases, output_weights, output_biases, inputs)
        output_biases_grad,output_weights_grad,hidden_biases_grad,hidden_weights_grad = compute_grads(hidden_weights,hidden_outputs, output_weights, output_outputs, inputs,outputs)
        l,k,H = Hamiltonian(outputs,output_outputs,pw,pb,pW,pB)
        hidden_weights,hidden_biases,pw,pb,output_weights,output_biases,pW,pB = leap_frog(hidden_weights, hidden_biases,pw,pb,hidden_weights_grad,hidden_biases_grad,output_weights,output_biases,pW,pB,output_weights_grad,output_biases_grad,eps,inputs,outputs)

        hidden_outputs,output_outputs = compute_outputs(hidden_weights,hidden_biases, output_weights, output_biases, inputs)
        l_new,k_new,H_new = Hamiltonian(outputs,output_outputs,pw,pb,pW,pB)

        print 'current U:',l
        print 'current K:',k
        print 'current H:',H
        print 'proposed U:',l_new
        print 'proposed K:',k_new
        print 'proposed H:',H_new
        print 'diff-h:',H_new-H
        print 'diff-k:',k_new-k
        print 'diff-u:',l_new-l
        print 'ratio-u:',(l_new-l)/l
        print 'ratio-h:',(H_new-H)/H
        print 'ratio-k:',(k_new-k)/k