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Verify all is in good shape for next CRAN release#64
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Description

@gvegayon
gvegayon
opened on Dec 9, 2025

We need to prepare the repository for the next CRAN release. We need to check:

  • The NEWS file is in proper order (updated with the needed updates).
  • The README file has been updated (rerun)
  • All R CMD check passes OK.
  • The DESCRIPTION file is in good shape.
  • roxygen2::document() was run.

You can do whatever other checks people do before resubmitting to CRAN.

Details:

Here are the details from the last version on CRAN (1.23.0)

Details

CRAN Package Check Results for Package netdiffuseR

Last updated on 2025-11-28 10:50:04 CET.

Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags -- | -- | -- | -- | -- | -- | -- r-devel-linux-x86_64-debian-clang | 1.23.0 | 107.61 | 345.50 | 453.11 | WARN |   r-devel-linux-x86_64-debian-gcc | 1.23.0 | 76.33 | 226.55 | 302.88 | WARN |   r-devel-linux-x86_64-fedora-clang | 1.23.0 | 136.00 | 619.36 | 755.36 | WARN |   r-devel-linux-x86_64-fedora-gcc | 1.23.0 | 157.00 | 569.23 | 726.23 | WARN |   r-devel-windows-x86_64 | 1.23.0 | 140.00 | 251.00 | 391.00 | WARN | --no-vignettes r-patched-linux-x86_64 | 1.23.0 | 113.94 | 322.21 | 436.15 | WARN |   r-release-linux-x86_64 | 1.23.0 | 107.74 | 322.29 | 430.03 | WARN |   r-release-macos-arm64 | 1.23.0 |   |   |   | OK |   r-release-macos-x86_64 | 1.23.0 | 51.00 | 209.00 | 260.00 | OK |   r-release-windows-x86_64 | 1.23.0 | 123.00 | 249.00 | 372.00 | WARN | --no-vignettes r-oldrel-macos-arm64 | 1.23.0 |   |   |   | NOTE |   r-oldrel-macos-x86_64 | 1.23.0 | 51.00 | 214.00 | 265.00 | NOTE |   r-oldrel-windows-x86_64 | 1.23.0 | 148.00 | 294.00 | 442.00 | WARN | --no-vignettes

Check Details

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘Debian clang version 21.1.5 (1)’ Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-15 (Debian 15.2.0-7) 15.2.0’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/data/gannet/ripley/R/packages/tests-clang/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘clang version 21.1.5’ Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<T>::result*) [with eT = double; typename arma_scalar_only<T>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/data/gannet/ripley/R/packages/tests-devel/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’ Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.6/netdiffuseR.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 14.3.0' Flavor: r-devel-windows-x86_64

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ Flavor: r-patched-linux-x86_64

Version: 1.23.0
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ Flavor: r-release-linux-x86_64

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.5/netdiffuseR.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 14.3.0' Flavor: r-release-windows-x86_64

Version: 1.23.0
Check: installed package size
Result: NOTE  installed size is 10.2Mb sub-directories of 1Mb or more: doc 2.4Mb libs 5.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN  Found the following significant warnings: infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.4/netdiffuseR.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 13.3.0' Flavor: r-oldrel-windows-x86_64

Version: 1.23.0
Flags: --no-vignettes
Check: installed package size
Result: NOTE  installed size is 5.7Mb sub-directories of 1Mb or more: doc 2.5Mb libs 1.5Mb Flavor: r-oldrel-windows-x86_64

CRAN Package Check Results for Package [netdiffuseR](https://cran-archive.r-project.org/web/checks/packages/netdiffuseR/index.html) Last updated on 2025-11-28 10:50:04 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.23.0 107.61 345.50 453.11 WARN
r-devel-linux-x86_64-debian-gcc 1.23.0 76.33 226.55 302.88 WARN
r-devel-linux-x86_64-fedora-clang 1.23.0 136.00 619.36 755.36 WARN
r-devel-linux-x86_64-fedora-gcc 1.23.0 157.00 569.23 726.23 WARN
r-devel-windows-x86_64 1.23.0 140.00 251.00 391.00 WARN --no-vignettes
r-patched-linux-x86_64 1.23.0 113.94 322.21 436.15 WARN
r-release-linux-x86_64 1.23.0 107.74 322.29 430.03 WARN
r-release-macos-arm64 1.23.0 OK
r-release-macos-x86_64 1.23.0 51.00 209.00 260.00 OK
r-release-windows-x86_64 1.23.0 123.00 249.00 372.00 WARN --no-vignettes
r-oldrel-macos-arm64 1.23.0 NOTE
r-oldrel-macos-x86_64 1.23.0 51.00 214.00 265.00 NOTE
r-oldrel-windows-x86_64 1.23.0 148.00 294.00 442.00 WARN --no-vignettes
Check Details
Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:16: warning: 'is_finite' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:16: warning: 'is_finite' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:16: warning: 'is_finite' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:16: warning: 'is_finite' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/data/gannet/ripley/R/packages/tests-clang/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/data/gannet/ripley/R/packages/tests-devel/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See 'd:/Rcompile/CRANpkg/local/4.6/netdiffuseR.Rcheck/00install.out' for details.

Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/netdiffuseR.Rcheck/00install.out’ for details.

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See 'd:/Rcompile/CRANpkg/local/4.5/netdiffuseR.Rcheck/00install.out' for details.

Version: 1.23.0
Check: installed package size
Result: NOTE
installed size is 10.2Mb
sub-directories of 1Mb or more:
doc 2.4Mb
libs 5.9Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.23.0
Flags: --no-vignettes
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
infection.cpp:58:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
infection.cpp:162:25: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only::result*) [with eT = double; typename arma_scalar_only::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
See 'd:/Rcompile/CRANpkg/local/4.4/netdiffuseR.Rcheck/00install.out' for details.

Version: 1.23.0
Flags: --no-vignettes
Check: installed package size
Result: NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 2.5Mb
libs 1.5Mb
Flavor: r-oldrel-windows-x86_64

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