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solver.py
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894 lines (736 loc) · 31.4 KB
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#basic libary
import copy
import random
import torch
import numpy as np
import matplotlib.pyplot as plt
import torch.nn as nn
from torch.nn.parameter import Parameter
import torch.optim as optim
import time
from sklearn.linear_model import HuberRegressor, LinearRegression
from scipy.optimize import minimize
from joblib import Parallel, delayed
class Matrix(nn.Module):## Matrix model, bypasses many issues in tensor copying
def __init__(self, row_d, col_d,rto=0.01,device="cpu"):
super(Matrix, self).__init__()
self.lin_mat = nn.Parameter(rto*torch.randn(row_d, col_d, requires_grad=True,device=device))
def forward(self,x):
return torch.matmul(self.lin_mat, x)
def subspace_error(U,V):
with torch.no_grad():
pu = U@torch.linalg.pinv(U.T@U)@U.T
if type(V) == torch.nn.parameter.Parameter:
pv = V@torch.linalg.pinv(V.T@V)@V.T
else:
pv = V.lin_mat@torch.linalg.pinv(V.lin_mat.T@V.lin_mat)@V.lin_mat.T
return torch.norm(pu-pv).item()
def g_recovery(truelist, estimate, norm='inf'):
ugtrue = truelist[0]
vgtrue = truelist[1]
uge = estimate[0]
vge = estimate[1]
if isinstance(uge, list):
N = len(uge)
alliters = list(range(N))
else:
alliters = uge.keys()
N = len(alliters)
res = 0.
with torch.no_grad():
for k in alliters:
if norm == 'inf':
res += torch.max(torch.abs(ugtrue@vgtrue[k].T-uge[k].lin_mat@vge[k].lin_mat.T))
else:
res += torch.norm(torch.abs(ugtrue@vgtrue[k].T-uge[k].lin_mat@vge[k].lin_mat.T))
return res/N
def l_recovery(truelist, estimate, norm='inf'):
ultrue = truelist[2]
vltrue = truelist[3]
ule = estimate[2]
vle = estimate[3]
if isinstance(ule, list):
N = len(ule)
alliters = list(range(N))
else:
alliters = ule.keys()
N = len(alliters)
res = 0.
with torch.no_grad():
for k in alliters:
if norm == 'inf':
res += torch.max(torch.abs(ultrue[k]@vltrue[k].T-ule[k].lin_mat@vle[k].lin_mat.T))
else:
res += torch.norm(torch.abs(ultrue[k]@vltrue[k].T-ule[k].lin_mat@vle[k].lin_mat.T))
return res/N
def soft(z, lam):
with torch.no_grad():
lala = z
lala[torch.abs(lala)<lam] = 0
#shrink = lam*torch.sign(z)
#shrink[torch.abs(lala)<lam] = 0
#lala -= shrink
return lala
m=torch.abs(z)-lam
m[m<0] = 0
return torch.sign(z)*m
def retract(mata):
u, s, v = torch.svd(mata)
s *= 0
s += 1
return torch.mm(torch.mm(u, torch.diag(s)), v.t())
def rob_svd(M,r=1):
def rob_svd_top_0(A,niter=10,printupdate=False):
Ac = copy.deepcopy(A)
Ac[Ac>1.35] = 1.35
Ac[Ac<-1.35] = -1.35
u,s,vh = np.linalg.svd(Ac)
m,n = A.shape
u0 = u[0:1].T*np.sqrt(s[0])
v0 = vh[:,0:1]*np.sqrt(s[0])
#print(u0.shape)
#print(v0.shape)
#assert False
hr = HuberRegressor()
for i in range(niter):
ulast = copy.deepcopy(u0)
for j in range(n):
hr.fit(u0, A[:,j])
v0[j,0] = hr.coef_[0]
for k in range(m):
hr.fit(v0, A.T[:,k])
u0[k,0] = hr.coef_[0]
#if np.linalg.norm(u0-ulast) < 1e-2:
# break
if printupdate:
print(i,np.linalg.norm(u0-ulast))
return u0,v0
def rob_svd_top_0_1(A,niter=10,printupdate=False):
Ac = copy.deepcopy(A)
Ac[Ac>1.35] = 1.35
Ac[Ac<-1.35] = -1.35
u,s,vh = np.linalg.svd(Ac)
m,n = A.shape
u0 = u[0:1].T*np.sqrt(s[0])
v0 = vh[:,0:1]*np.sqrt(s[0])
#print(u0.shape)
#print(v0.shape)
#assert False
def hr_fit(y,x):
hr = HuberRegressor()
hr.fit(y,x)
return hr.coef_[0]
for i in range(niter):
ulast = copy.deepcopy(u0)
models = Parallel(n_jobs=-1)(delayed(hr_fit)(u0,A[:,j]) for j in range(n))
v0 = np.array(models).reshape(n,1)
models = Parallel(n_jobs=-1)(delayed(hr_fit)(v0,A.T[:,j]) for j in range(m))
u0 = np.array(models).reshape(m,1)
#if np.linalg.norm(u0-ulast) < 1e-2:
# break
if printupdate:
print(i,np.linalg.norm(u0-ulast))
return u0,v0
def rob_svd_top(A,niter=10,printupdate=False):
Ac = copy.deepcopy(A)
Ac[Ac>1.35] = 1.35
Ac[Ac<-1.35] = -1.35
try:
u,s,vh = np.linalg.svd(Ac)
except:
print("Error happened")
print(Ac)
print(A)
assert False
m,n = A.shape
u0 = u[0:1].T*np.sqrt(s[0])
v0 = vh[:,0:1]*np.sqrt(s[0])
#print(u0.shape)
#print(v0.shape)
#assert False
theta = 1.35
for i in range(niter):
ulast = copy.deepcopy(u0)
coeffmat = A - u0@v0.T
coeffmat[coeffmat > 2*theta] = 2*theta
coeffmat[coeffmat < -2*theta] = -2*theta
divisor = A - u0@v0.T
divisor[np.abs(divisor)<1e-8] = 1e-8
psi = coeffmat/divisor
Aajussted = A*psi
u0 = Aajussted@v0/(psi@(v0**2))
coeffmat = A - u0@v0.T
coeffmat[coeffmat > theta] = theta
coeffmat[coeffmat < -theta] = -theta
divisor = A - u0@v0.T
divisor[np.abs(divisor)<1e-8] = 1e-8
psi = coeffmat/divisor
Aajussted = A*psi
v0 = Aajussted.T@u0/(psi.T@(u0**2))
#print(i,np.linalg.norm(u0-ulast))
#print(u0)
return u0,v0
def rob_svd_top_3(A,niter=10,printupdate=False):
u,s,vh = np.linalg.svd(A)
m,n = A.shape
u0 = u[0:1].T*np.sqrt(s[0])
v0 = vh[:,0:1]*np.sqrt(s[0])
def huber_loss(A, u, v, alpha=0.0001):
diff = A - u@v.T
theta = 1.35
huber_diff = np.where(np.abs(diff) <= theta, 0.5 * diff**2, np.abs(diff)*theta - theta**2*0.5)
return np.sum(huber_diff) + alpha*(np.sum(u**2)+np.sum(v**2))
for i in range(niter):
ulast = copy.deepcopy(u0)
lossv = lambda x: huber_loss(A,u0,x.reshape(n,1))
res = minimize(lossv, v0.flatten(), method='L-BFGS-B')
v0 = res.x.reshape(n,1)
lossu = lambda x: huber_loss(A,x.reshape(m,1),v0)
res = minimize(lossu, u0.flatten(), method='L-BFGS-B')
u0 = res.x.reshape(m,1)
return u0,v0
def rob_svd_top_4(A):
def huber_loss(x, delta):
return np.where(np.abs(x) <= delta, x**2 / 2, delta * (np.abs(x) - delta / 2))
def huber_loss_grad(x, delta):
return np.where(np.abs(x) <= delta, x, delta * np.sign(x))
def huber_loss_fun(params, A, delta):
u = params[:A.shape[0]]
v = params[A.shape[0]:]
res = np.outer(u, v)
loss = np.sum(huber_loss(A - res, delta))
return loss
def huber_loss_grad_fun(params, A, delta):
u = params[:A.shape[0]]
v = params[A.shape[0]:]
res = np.outer(u, v)
hlg = huber_loss_grad(A - res, delta)
grad_u = hlg@ v.reshape(A.shape[1],1)
grad_v = hlg.T @ u.reshape(A.shape[0],1)
return np.concatenate([grad_u[:,0], grad_v[:,0]])
delta = 1.35
# Define the objective function for the optimizer
objective = lambda params: huber_loss_fun(params, A, delta)
# Define the gradient of the objective function for the optimizer
gradient = lambda params: huber_loss_grad_fun(params, A, delta)
# Concatenate u and v
Ac = copy.deepcopy(A)
Ac[Ac>1.35] = 1.35
Ac[Ac<-1.35] = -1.35
u,s,vh = np.linalg.svd(Ac)
m,n = A.shape
u0 = u[0]*np.sqrt(s[0])
v0 = vh[:,0]*np.sqrt(s[0])
params = np.concatenate([u0, v0])
# Minimize the objective function using L-BFGS-B method
print(objective(params))
print(objective(params*0))
result = minimize(objective, params, jac=gradient, method='L-BFGS-B')
u0 = result.x[:m].reshape(m,1)
v0 = result.x[m:].reshape(n,1)
print(np.linalg.norm(u0@v0.T))
return u0,v0
A = copy.deepcopy(M)
ulist = []
vlist = []
for rk in range(r):
#print(rk)
ui,vi = rob_svd_top(A)
A = A - ui@vi.T
ulist.append(ui)
vlist.append(vi)
return np.concatenate(ulist,axis=1), np.concatenate(vlist,axis=1)
def heterogeneous_matrix_factorization(Yin,args,initialization=[],verbose=1):
if isinstance(Yin, list):
N = len(Yin)
alliters = list(range(N))
else:
alliters = Yin.keys()
N = len(alliters)
Y = Yin
n2dict = {}
lastloss = 1e10
for y in alliters:
(n1,n2dict[y]) = Y[y].shape
if isinstance(args["r2"], list):
nlclst = args["r2"]
else:
nlclst = [args["r2"] for i in range(N)]
if len(initialization) == 0:
Ug = {k:Matrix(n1,args["r1"],device=Y[k].device) for k in alliters}
Ug_avg = Matrix(n1,args["r1"],device=Y[y].device)
Vg = {k:Matrix(n2dict[k],args["r1"],device=Y[k].device) for k in alliters}
Ul = {k:Matrix(n1,nlclst[k],device=Y[k].device) for k in alliters}
Vl = {k:Matrix(n2dict[k],nlclst[k],device=Y[k].device) for k in alliters}
else:
Ug = copy.deepcopy(initialization[0])
for ugi in Ug:
Ug_avg = copy.deepcopy(Ug[ugi])
break
Vg = copy.deepcopy(initialization[1])
Ul = copy.deepcopy(initialization[2])
Vl = copy.deepcopy(initialization[3])
parlist = {i:list(Ug[i].parameters())+list(Vg[i].parameters())+ list(Ul[i].parameters())+list(Vl[i].parameters()) for i in alliters}
if args["optim"] == "SGD":
optim = {k:torch.optim.SGD(parlist[k], lr=args["lr"], weight_decay=args["wd"]) for k in alliters}
else:
raise Exception("Error: The optimizor %s is not impkemented for hmf."%args['optim'])
for n in range(args["epochs"]):
time_start = time.time()
tot_loss = 0
tot_reg = 0
tot_ureg = 0
for i in alliters:
#gradient descent step
pred = Ug[i].lin_mat@Vg[i].lin_mat.T+ Ul[i].lin_mat@Vl[i].lin_mat.T
regi = (torch.sum((Ug[i].lin_mat.T@Ug[i].lin_mat-torch.eye(args["r1"],device=Y[i].device))**2)+torch.sum((Ul[i].lin_mat.T@Ul[i].lin_mat-torch.eye(nlclst[i],device=Y[i].device))**2))
lossi = torch.sum((pred-Y[i])**2)+args["beta"]*regi#print(n1,n2dict[i]))**2)+torch.sum(()**2))
optim[i].zero_grad()
lossi.backward()
optim[i].step()
tot_loss += lossi.item()
tot_ureg += regi.item()
with torch.no_grad():
# averaging step
Ug_avg.lin_mat *= 0
Ug_avg.lin_mat += sum([Ug[i].lin_mat for i in alliters])/N
#correction step
pj0 = torch.inverse(Ug_avg.lin_mat.T@Ug_avg.lin_mat)@Ug_avg.lin_mat.T
projection = Ug_avg.lin_mat@pj0
for i in alliters:
Ug[i].lin_mat *= 0
Ug[i].lin_mat += Ug_avg.lin_mat
#Ul[i].lin_mat -= Ug_avg.lin_mat@torch.inverse(Ug_avg.lin_mat.T@Ug_avg.lin_mat)@(Ug_avg.lin_mat.T@Ul[i].lin_mat)
Vg[i].lin_mat += Vl[i].lin_mat@Ul[i].lin_mat.T@pj0.T
Ul[i].lin_mat -= projection@Ul[i].lin_mat
tot_loss /= N
tot_reg /= N
tot_ureg /= N
if tot_loss > lastloss:
print("WARNING")
print("loss is increased, decrease the stepsize")
first = True
for j in alliters:
for g in optim[j].param_groups:
g['lr'] *= np.exp(-1)
if first:
print('new stepsize: %.8f'%g['lr'])
first = False
if "epsilon" in args and "break_early" in args:
if (lastloss - tot_loss)/ tot_loss < args["epsilon"]:# and tot_loss <1:
print("ttloss %.4f"%tot_loss)
print("inner loop converged in %s iterations"%n)
break
else:
if n %(args["epochs"]//10) == 0:
print((lastloss - tot_loss)/ tot_loss)
#lastloss = tot_loss
lastloss = tot_loss
output = "[%s/%s], loss %.6f, reg %.6f, ureg %.6f"%(n,args["epochs"],tot_loss, tot_reg, tot_ureg)
if "global_subspace_err_metric" in args.keys():
output += " gserr %s "%args["global_subspace_err_metric"](Ug_avg)
if "local_subspace_err_metric" in args.keys():
output += " lserr %s "%args["local_subspace_err_metric"](Ul)
if "global_recovery_error" in args.keys():
output += " g_recovery_err %.8f, "%args["global_recovery_error"]([Ug,Vg,Ul,Vl])
if "local_recovery_error" in args.keys():
output += " l_recovery_err %.8f, "%args["local_recovery_error"]([Ug,Vg,Ul,Vl])
time_end = time.time()
if (verbose>0.5 and n%(args["epochs"]//10)==0) or verbose >10:
print(output+", time %s"%(time_end-time_start))
return Ug, Vg, Ul, Vl
def perpca(Y, args,initialization=[]):
(n1,n2) = Y[0].shape
N = len(Y)
if len(initialization) == 0:
Ug = [torch.randn(n1,args["ngc"],dtype=Y[k].dtype).to(args['device'])*0.001 for k in range(N)]
Ug_avg = torch.randn(n1,args["ngc"],dtype=Y[0].dtype).to(args['device'])*0.001
Ul = [torch.randn(n1,args["nlc"],dtype=Y[k].dtype).to(args['device'])*0.001 for k in range(N)]
else:
Ug = [torch.randn(n1,args["ngc"],dtype=Y[k].dtype).to(args['device'])*0.001 for k in range(N)]
Ug_avg = torch.randn(n1,args["ngc"],dtype=Y[0].dtype).to(args['device'])*0.001
Ul = [torch.randn(n1,args["nlc"],dtype=Y[k].dtype).to(args['device'])*0.001 for k in range(N)]
with torch.no_grad():
for i in range(N):
Ug[i] *= 0
Ug[i] += initialization[0][i]
Ug_avg *= 0
Ug_avg += Ug[0]
Ul[i] *= 0
Ul[i] += initialization[1][i]
#print(Ug[0])
#print(Ug[0].dtype)
#print(Y[0].dtype)
#assert False
minloss = 1000000
noprogress = 0
for n in range(args["epochs"]):
time_start = time.time()
tot_loss = 0
for i in range(N):
# correction
with torch.no_grad():
Ulcorrected = Ul[i] - Ug[i]@Ug[i].T@Ul[i]
Ul[i] = retract(Ulcorrected)
Ug[i] += args['lr'] * Y[i]@(Y[i].T@Ug[i])
Ul[i] += args['lr'] * Y[i]@(Y[i].T@Ul[i])
retracted = retract(torch.cat((Ug[i],Ul[i]),dim=1))
Ug[i] = retracted[:,:args['ngc']]
Ul[i] = retracted[:,args['ngc']:]
tot_loss += torch.norm(Y[i].T@torch.cat((Ug[i],Ul[i]),dim=1))**2/(n1*n2)
with torch.no_grad():
Ug_avg *= 0
Ug_avg += retract(sum([Ug[i] for i in range(N)])/N)
for i in range(N):
Ug[i] *= 0
Ug[i] += Ug_avg
tot_loss /= N
# if the loss is too small, break
if "break_on_epsilon" in args.keys():
if tot_loss < args["break_on_epsilon"]:
break
# if there is no progress for many iterations, break
if tot_loss < minloss:
minloss = tot_loss
noprogress = 0
else:
noprogress += 1
if 'noprogressthreshold' in args.keys():
if noprogress > args['noprogressthreshold']:
print("reduceing the stepsize, loss %.6f"%tot_loss)
with torch.no_grad():
for k in range(N):
for i, param_group in enumerate(optim[k].param_groups):
param_group['lr']*= np.exp(-1)
print(param_group['lr'])
noprogress = 0
time_end = time.time()
output = "[%s/%s], loss %.6f, "%(n,args["epochs"],tot_loss)
if "global_subspace_err_metric" in args.keys():
output += " gserr %s "%args["global_subspace_err_metric"](Ug_avg)
if "local_subspace_err_metric" in args.keys():
output += " lserr %s "%args["local_subspace_err_metric"](Ul)
output += " adderr %s "% (args["global_subspace_err_metric"](Ug_avg)+args["local_subspace_err_metric"](Ul))
'''
if "global_recovery_error" in args.keys():
output += " g_recovery_err %.8f, "%args["global_recovery_error"]([Ug,Vg,Ul,Vl])
if "local_recovery_error" in args.keys():
output += " l_recovery_err %.8f, "%args["local_recovery_error"]([Ug,Vg,Ul,Vl])
'''
#time_end = time.time()
if (args['verbose']>0.5 and n%(args["epochs"]//10+1)==0) or args['verbose'] >10 or n == args["epochs"]-1:
print(output+", time %s"%(time_end-time_start))
#print("[%s/%s], loss %s"%(n,args["epochs"],tot_loss))
return Ug, Ul
def robustpca(Y, args,initialization=[]):
(n1,n2) = Y[0].shape
N = len(Y)
Yallinone = torch.stack([Y[i].flatten() for i in range(len(Y))])
lbd = args["lbd_s_outer"]
L = copy.deepcopy(Yallinone)
L *= 0
for n in range(args["outer_epochs"]):
time_start = time.time()
with torch.no_grad():
S = soft(Yallinone - L, lbd)
tot_loss = 0
lbd *= args["rho"]
u, s, v = torch.svd(Yallinone - S)
s[(args["ngc"]+args["nlc"]):] *= 0
L = torch.mm(torch.mm(u, torch.diag(s)), v.t())
tot_reg = torch.count_nonzero(S)
tot_loss = torch.norm(Yallinone-L-S).item()
output = "[%s/%s], loss %.6f, reg %.6f "%(n,args["outer_epochs"],tot_loss, tot_reg)
time_end = time.time()
if (args['verbose']>0.5 and n%(args["outer_epochs"]//10+1)==0) or args['verbose'] >10 or n == args["outer_epochs"]-1:
print(output+", time %s"%(time_end-time_start))
#print("[%s/%s], loss %s"%(n,args["epochs"],tot_loss))
low_rank_part = [L[i].view(Y[i].shape) for i in range(len(Y))]
sparse_part = [S[i].view(Y[i].shape) for i in range(len(Y))]
return low_rank_part, sparse_part
def jive(Yin, args, initialization=[]):
if isinstance(Yin, list):
N = len(Yin)
alliters = list(range(N))
else:
alliters = Yin.keys()
N = len(alliters)
Y = Yin
n2dict = {}
lastloss = 1e10
for y in alliters:
(n1, n2dict[y]) = Y[y].shape
if isinstance(args["nlc"], list):
nlclst = args["nlc"]
else:
nlclst = [args["nlc"] for i in range(N)]
if len(initialization) == 0:
J = {k: torch.randn((n1, n2dict[k]), device=Y[k].device) for k in alliters}
A = {k: torch.randn((n1, n2dict[k]), device=Y[k].device)*0 for k in alliters}
else:
raise Exception('not implemented for non-standard initialization!')
for n in range(args["epochs"]):
time_start = time.time()
tot_loss = 0
tot_reg = 0
with torch.no_grad():
res_list = [Yin[k] - A[k] for k in alliters]
res_concat = torch.cat(res_list, dim=1)
u,s,vh = torch.svd(res_concat)
projto = u[:,:args["ngc"]]
s[args['ngc']:] *= 0
res_concat = u@torch.diag_embed(s)@vh.T
startid = 0
for i in alliters:
n1i, n2i = Yin[i].shape
J[i] *= 0
J[i] += res_concat[:, startid:(startid+n2i)]
startid += n2i
for i in alliters:
# update individual parts
resi = Yin[i] - J[i]
u, s, vh = torch.svd(resi)
s[args['nlc']:] *= 0
A[i] *= 0
A[i] += u @ torch.diag_embed(s) @ vh.T
for i in alliters:
tot_loss += torch.sum((Yin[i]-J[i]-A[i])**2)
tot_loss /= N
tot_reg /= N
time_end = time.time()
output = "[%s/%s], loss %.6f, " % (n, args["epochs"], tot_loss)
if "global_subspace_err_metric" in args.keys():
output += " gserr %s "%args["global_subspace_err_metric"](projto)
if "local_subspace_err_metric" in args.keys():
Ul = []
for i in alliters:
u, s, vh = torch.svd(A[i])
Ul.append(u[:,:args['nlc']])
output += " lserr %s "%args["local_subspace_err_metric"](Ul)
output += " adderr %s "% (args["global_subspace_err_metric"](projto)+args["local_subspace_err_metric"](Ul))
if "jive_global_recovery_error" in args.keys():
output += " g_recovery_err %.8f, " % args["jive_global_recovery_error"]([J,A])
if "jive_local_recovery_error" in args.keys():
output += " l_recovery_err %.8f, " % args["jive_local_recovery_error"]([J,A])
if (args['verbose'] > 0.5 and n % (args["epochs"] // 10) == 0) or args['verbose'] > 10 or n == args["epochs"]-1:
print(output + ", time %s" % (time_end - time_start))
return J, A
def robust_jive(Yin, args, initialization=[]):
if isinstance(Yin, list):
N = len(Yin)
alliters = list(range(N))
else:
alliters = Yin.keys()
N = len(alliters)
n2dict = {}
lastloss = 1e10
for y in alliters:
(n1, n2dict[y]) = Yin[y].shape
if isinstance(args["nlc"], list):
nlclst = args["nlc"]
else:
nlclst = [args["nlc"] for i in range(N)]
if len(initialization) == 0:
J = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device) for k in alliters}
A = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device)*0 for k in alliters}
E = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device)*0 for k in alliters}
F = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device)*0 for k in alliters}
R = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device)*0 for k in alliters}
Y = {k: torch.randn((n1, n2dict[k]), device=Yin[k].device)*0 for k in alliters}
else:
raise Exception('not implemented for non-standard initialization!')
for n in range(args["epochs"]):
time_start = time.time()
tot_loss = 0
tot_reg = 0
with torch.no_grad():
# update J
res_list = [Yin[k] - A[k] -E[k] + F[k]/args['mu'] for k in alliters]
res_concat = torch.cat(res_list, dim=1)
u,s,vh = torch.svd(res_concat)
s[args['ngc']:] *= 0
projto = u[:,:args['ngc']]
res_concat = u@torch.diag_embed(s)@vh.T
startid = 0
for i in alliters:
n1i, n2i = Yin[i].shape
J[i] *= 0
J[i] += res_concat[:, startid:(startid+n2i)]
startid += n2i
# update A
for i in alliters:
resi = (Yin[i] - J[i] - E[i] + R[i] + (F[i]+Y[i])/args["mu"])/2
resi = resi - projto@(projto.T@resi)
#print('print shape')
#print(resi.shape)
#print(A[i].shape)
A[i] *= 0
A[i] += resi
# update R
for i in alliters:
resi = A[i] - Y[i]/args["mu"]
u, s, vh = torch.svd(resi)
#s[args['nlc']:] *= 0
s = (s-1/args["mu"]*torch.sign(s))*(torch.abs(s)>1/args["mu"])
R[i] *= 0
R[i] += u @ torch.diag_embed(s) @ vh.T
# update E
for i in alliters:
resi = Yin[i] - J[i] - A[i] + F[i]/args["mu"]
thresh = args["lbd"]/args["mu"]
resi = (resi-thresh*torch.sign(resi))*(torch.abs(resi)>thresh)
E[i] *= 0
E[i] += resi
# update langrangian multipliers
for i in alliters:
F[i] = F[i] + args["mu"]*(Yin[i] - J[i] - A[i] - E[i])
Y[i] = Y[i] + args["mu"]*(R[i] - A[i])
for i in alliters:
tot_loss += (torch.norm(R[i],p='nuc')+args['lbd']*torch.norm(E[i],1))#(torch.abs(Yin[i]-J[i]-A[i]))
tot_loss /= N
tot_reg /= N
output = "[%s/%s], loss %.6f, " % (n, args["epochs"], tot_loss)
if "global_subspace_err_metric" in args.keys():
output += " gserr %s "%args["global_subspace_err_metric"](projto)
if "local_subspace_err_metric" in args.keys():
Ul = []
for i in alliters:
u, s, vh = torch.svd(A[i])
Ul.append(u[:,:args['nlc']])
output += " lserr %s "%args["local_subspace_err_metric"](Ul)
output += " adderr %s "% (args["global_subspace_err_metric"](projto)+args["local_subspace_err_metric"](Ul))
if "rjive_global_recovery_error" in args.keys():
output += " g_recovery_err %.8f, " % args["rjive_global_recovery_error"]([J,A])
if "rjive_local_recovery_error" in args.keys():
output += " l_recovery_err %.8f, " % args["rjive_local_recovery_error"]([J,A])
if "rjive_e_recovery_error" in args.keys():
output += " e_recovery_err %.8f, " % args["rjive_e_recovery_error"]([E])
time_end = time.time()
if (args['verbose'] > 0.5 and n % (args["epochs"] // 10) == 0) or args['verbose'] > 10 or n == args["epochs"]-1:
print(output + ", time %s" % (time_end - time_start))
return J, A, E
def rajive(Yin, args):
if isinstance(Yin, list):
N = len(Yin)
alliters = list(range(N))
else:
alliters = Yin.keys()
N = len(alliters)
# phase 1: initial signal space extraction
print("rajive, phase 1")
utilde_list = []
for i in range(N):
print(i)
uhat,vhat = rob_svd(Yin[i].cpu().numpy(),r=args["ngc"]+args["nlc"])
utilde, vh = np.linalg.qr(uhat)
utilde_list.append(utilde)
# phase 2: score space segmentation
print("rajive, phase 2")
uconcat = np.concatenate(utilde_list,axis=1)
ushared,vshared = rob_svd(uconcat,r=args["ngc"])
ushared, vshared = np.linalg.qr(ushared)
# phase 3: final decomposition
print("rajive, phase 3")
J = []
A = []
E = []
for i in range(N):
yi = Yin[i].cpu().numpy()
yijoint = ushared@ushared.T@yi
ujhat,vjhat = rob_svd(yijoint,r=args["ngc"])
J.append(torch.tensor(ujhat@vjhat.T,device=Yin[i].device))
yiindiv = yi-yijoint
uihat,vihat = rob_svd(yiindiv,r=args["nlc"])
A.append(torch.tensor(uihat@vihat.T,device=Yin[i].device))
E.append(torch.tensor(yi-ujhat@vjhat.T- uihat@vihat.T,device=Yin[i].device))
return J, A, E
def heterogeneous_matrix_completion(Y, Ymask, args,initialization=[]):
(n1,n2) = Y[0].shape
N = len(Y)
if len(initialization) == 0:
Ug = [Parameter(torch.randn(n1,args["ngc"]).to(args['device'])*0.001) for k in range(N)]
Ug_avg = Parameter(torch.randn(n1,args["ngc"]).to(args['device'])*0.001)
Vg = [Parameter(torch.randn(n2,args["ngc"]).to(args['device'])*0.001) for k in range(N)]
Ul = [Parameter(torch.randn(n1,args["nlc"]).to(args['device'])*0.001) for k in range(N)]
Vl = [Parameter(torch.randn(n2,args["nlc"]).to(args['device'])*0.001) for k in range(N)]
else:
Ug = [Parameter(torch.randn(n1,args["ngc"]).to(args['device'])*0.001) for k in range(N)]
Ug_avg = Parameter(torch.randn(n1,args["ngc"]).to(args['device'])*0.001)
Vg = [Parameter(torch.randn(Y[k].size()[1],args["ngc"]).to(args['device'])*0.001) for k in range(N)]
Ul = [Parameter(torch.randn(n1,args["nlc"]).to(args['device'])*0.001) for k in range(N)]
Vl = [Parameter(torch.randn(Y[k].size()[1],args["nlc"]).to(args['device'])*0.001) for k in range(N)]
with torch.no_grad():
for i in range(N):
Ug[i] *= 0
Ug[i] += initialization[0][i]
Ug_avg *= 0
Ug_avg += Ug[0]
Vg[i] *= 0
Vg[i] += initialization[1][i]
Ul[i] *= 0
Ul[i] += initialization[2][i]
Vl[i] *= 0
Vl[i] += initialization[3][i]
parlist = [[Ug[i]]+[Vg[i]]+
[Ul[i]]+[Vl[i]] for i in range(N)]
if args["optim"] == "SGD":
optim = [torch.optim.SGD(parlist[k], lr=args["lr"]) for k in range(N)]
else:
raise Exception("Optimizer %s is not implemented"%args["optim"])
minloss = 1000000
noprogress = 0
for n in range(args["epochs"]):
time_start = time.time()
tot_loss = 0
for i in range(N):
pred = Ug[i]@Vg[i].T+ Ul[i]@Vl[i].T
lossi = torch.sum((Ymask[i]*(Y[i]-pred))**2)
optim[i].zero_grad()
lossi.backward()
optim[i].step()
tot_loss += lossi.item()
with torch.no_grad():
Ug_avg *= 0
Ug_avg += sum([Ug[i] for i in range(N)])/N
pj0 = torch.inverse(Ug_avg.T@Ug_avg)@Ug_avg.T
projection = Ug_avg@pj0
for i in range(N):
Ug[i] *= 0
Ug[i] += Ug_avg
Vg[i] += Vl[i]@Ul[i].T@pj0.T
Ul[i] -= projection@Ul[i]
tot_loss /= N
# if the loss is too small, break
if "break_on_epsilon" in args.keys():
if tot_loss < args["break_on_epsilon"]:
break
# if there is no progress for many iterations, break
if tot_loss < minloss:
minloss = tot_loss
noprogress = 0
else:
noprogress += 1
if 'noprogressthreshold' in args.keys():
if noprogress > args['noprogressthreshold']:
print("reduceing the stepsize, loss %.6f"%tot_loss)
with torch.no_grad():
for k in range(N):
for i, param_group in enumerate(optim[k].param_groups):
param_group['lr']*= np.exp(-1)
print(param_group['lr'])
noprogress = 0
output = "[%s/%s], loss %.6f, "%(n,args["epochs"],tot_loss)
if "global_subspace_err_metric" in args.keys():
output += " gserr %s "%args["global_subspace_err_metric"](Ug_avg)
if "local_subspace_err_metric" in args.keys():
output += " lserr %s "%args["local_subspace_err_metric"](Ul)
output += " adderr %s "% (args["global_subspace_err_metric"](Ug_avg)+args["local_subspace_err_metric"](Ul))
if "global_recovery_error" in args.keys():
output += " g_recovery_err %.8f, "%args["global_recovery_error"]([Ug,Vg,Ul,Vl])
if "local_recovery_error" in args.keys():
output += " l_recovery_err %.8f, "%args["local_recovery_error"]([Ug,Vg,Ul,Vl])
time_end = time.time()
if (args['verbose']>0.5 and n%(args["epochs"]//10+1)==0) or args['verbose'] >10 or n == args["epochs"]-1:
print(output+", time %s"%(time_end-time_start))
#print("[%s/%s], loss %s"%(n,args["epochs"],tot_loss))
return Ug, Vg, Ul, Vl