diff --git a/_episodes_rmd/01-intro-rstudio.Rmd b/_episodes_rmd/01-intro-rstudio.Rmd
index 49d7698a3..0f8912dbb 100644
--- a/_episodes_rmd/01-intro-rstudio.Rmd
+++ b/_episodes_rmd/01-intro-rstudio.Rmd
@@ -42,7 +42,7 @@ on if needed. You can copy-paste into the R console, but the RStudio script
editor allows you to 'send' the current line or the currently selected text to
the R console using the Ctrl+Return shortcut.
-At some point in your analysis you may want to check the content of variable or
+At some point in your analysis you may want to check the content of a variable or
the structure of an object, without necessarily keep a record of it in your
script. You can type these commands directly in the console. RStudio provides
the Ctrl+1 and Ctrl+2 shortcuts allow you to jump between the script and the
@@ -61,8 +61,16 @@ window and press Esc; this should help you out of trouble.
### Commenting
-Use `#` signs to comment. Comment liberally in your R scripts. Anything to the
-right of a `#` is ignored by R.
+Use `#` symbols to start a comment. Anything to the
+right of a `#` is ignored by R. However, keep in mind that code should be
+[like a joke: good without explanation](https://twitter.com/search?q=code%20joke%20explain%20good).
+This means that adding comments should be of lower priority than:
+
+- naming functions, arguments and variables in a self-explanatory
+manner,
+- cleaning up or rewriting hard-to-understand code
+- adding formal documentation for your functions
+- adding automated tests for your code
### Assignment Operator
diff --git a/_episodes_rmd/03-func-R.Rmd b/_episodes_rmd/03-func-R.Rmd
index e7e64ed1d..ace7a6f75 100644
--- a/_episodes_rmd/03-func-R.Rmd
+++ b/_episodes_rmd/03-func-R.Rmd
@@ -31,6 +31,9 @@ knitr_fig_path("03-func-R-")
```
If we only have one data set to analyze, it would probably be faster to load the file into a spreadsheet and use that to plot some simple statistics.
+However, we often have multiple data files or can expect more in the future.
+That's why it's usually a good idea to prepare for this case
+and write code in a reproducible manner right away.
In this lesson, we'll learn how to write a function so that we can repeat several operations with a single command.
### Defining functions
@@ -197,8 +200,8 @@ center <- function(data, desired) {
```
We could test this on our actual data, but since we don't know what the values ought to be, it will be hard to tell if the result was correct.
-Instead, let's create a vector of 0s and then center that around 3.
-This will make it simple to see if our function is working as expected:
+Instead, let's create a small vector of integers and center it around a small integer,
+so that we can comprehend, retrace and therefore check the calculation in our head:
```{r, }
(z <- c(1, 2, 3))
@@ -310,20 +313,23 @@ Each `@param` documents an input parameter, while `@return` explains the functio
output. The more comprehensible a description of its in- and output data (types), the
easier a function can be integrated into larger analysis pipelines.
-```{r challenge-more-advanced-function-analyze, eval=FALSE, include=FALSE}
-analyze <- function(filename) {
- dat <- read.csv(file = filename, header = FALSE)
- avg_day_inflammation <- colMeans(dat)
- plot(avg_day_inflammation)
-}
-```
-
> ## Functions to Create Graphs
>
-> Write a function called `analyze` that takes a filename as an argument
-> and displays the graph produced in the [previous lesson][start-ep] (average inflammation over time).
-> `analyze("inflammation.csv")` should produce the graph already shown,
-> Be sure to document your function with roxygen comments.
+> To automate the plotting of the graphs from the
+> [previous lesson][start-ep] (average inflammation over time),
+> we wrote the following function:
+> ~~~
+> analyze <- function(filename) {
+> # Input a character string that correspondes to a filename to
+> # to get the average inflammation of each day plotted.
+> dat <- read.csv(file = filename, header = FALSE)
+> avg_day_inflammation <- colMeans(dat)
+> plot(avg_day_inflammation)
+> }
+> ~~~
+> {: .r}
+>
+> Formalise the above comments into roxygen-style function documentation.
>
> > ## Solution
> > ~~~
@@ -335,11 +341,7 @@ analyze <- function(filename) {
> > #'
> > #' @examples
> > #' analyze("inflammation.csv")
-> > analyze <- function(filename) {
-> > dat <- read.csv(file = filename, header = FALSE)
-> > avg_day_inflammation <- colMeans(dat)
-> > plot(avg_day_inflammation)
-> > }
+> > analyze <- function(filename) { … }
> > ~~~
> > {: .r}
> {: .solution}
@@ -352,17 +354,15 @@ and a roxygen comment skeleton will be inserted. Note that we are not using
`@export` here, because it will only become relevant for [packaging]({{ page.root }}/reference/#packages).
You can safely ignore it for now, or delete it.
-```{r challenge-more-advanced-function-rescale, include=FALSE}
-#' Rescaling vectors to lie in the range 0 to 1
-#'
-#' @param v A numeric vector
-#'
-#' @return The rescaled numeric vector
-#'
-#' @examples
-#' rescale(c(1, 2, 3)) # should return [1] 0.0 0.5 1.0
-#' rescale(c(1, 2, 3, 4, 5)) # should return [1] 0.00 0.25 0.50 0.75 1.00
+## Rescaling
+
+Another example of an informally documented function:
+
+```{r challenge-more-advanced-function-rescale}
rescale <- function(v) {
+ # takes a vector as input
+ # returns a corresponding vector of values scaled to the range 0 to 1
+ # e.g.: rescale(c(1, 2, 3)) => 0.0 0.5 1.0
L <- min(v)
H <- max(v)
result <- (v - L) / (H - L)
@@ -370,16 +370,18 @@ rescale <- function(v) {
}
```
-> ## Rescaling
->
-> Write a function `rescale` that takes a vector as input and returns a corresponding vector of values scaled to lie in the range 0 to 1.
-> Please create a new file for this and save it as `rescale.R`.
-> (If `L` and `H` are the lowest and highest values in the original vector, then the replacement for a value `v` should be `(v-L) / (H-L)`.)
-> Be sure to document your function with roxygen comments.
+Please create a new file for this and save it as `rescale.R`, and test that
+it is mathematically correct by using `min`, `max`, and `plot`.
+
+> ## Rescaling documentation
>
-> Test that your `rescale` function is working properly using `min`, `max`, and `plot`.
+> Convert `rescale`'s comments into roxygen function docu! Which keyboard shortcut
+> gets you started in RStudio?
>
> > ## Solution
+> >
+> > Find the keyboard shortcut above, and one possible roxygen documentation below.
+> >
> > ~~~
> > #' Rescaling vectors to lie in the range 0 to 1
> > #'
@@ -390,13 +392,7 @@ rescale <- function(v) {
> > #' @examples
> > #' rescale(c(1, 2, 3)) # should return [1] 0.0 0.5 1.0
> > #' rescale(c(1, 2, 3, 4, 5)) # should return [1] 0.00 0.25 0.50 0.75 1.00
-> >
-> > rescale <- function(v) {
-> > L <- min(v)
-> > H <- max(v)
-> > result <- (v - L) / (H - L)
-> > return(result)
-> > }
+> > rescale <- function(v) { ... }
> > ~~~
> > {: .r}
> {: .solution}
@@ -546,3 +542,8 @@ saved by typing less. Also, a good IDE (integrated development environment) will
reduce your typing with auto-completion. Thus, it is generally better to only omit
an argument name if its value clarifies it. For example, `read.csv("path/to/file.xyz")`
is comprehensible even without `...(file = "...` in the middle.
+
+> For the next episodes, we'll initially ignore both `2`-versions of our
+> functions. Keep them in separate files, close those and concentrate on going
+> back to the roots: `center()` and `rescale()`.
+{: .callout}
diff --git a/_episodes_rmd/04-testthat.Rmd b/_episodes_rmd/04-testthat.Rmd
new file mode 100644
index 000000000..949027dfe
--- /dev/null
+++ b/_episodes_rmd/04-testthat.Rmd
@@ -0,0 +1,107 @@
+---
+title: "Testing R Functions Automatically"
+teaching: 30
+exercises: 10
+questions:
+- "What is the benefit of auto-testing my functions?"
+- "How do I create and run test-cases in R?"
+- "Why would I change my code after I got it to run?"
+objectives:
+- "Formalise documented examples as tests."
+- "Use testthat functions to create and run tests."
+keypoints:
+- "Tests help you ensure correct code."
+source: Rmd
+---
+
+```{r, include = FALSE}
+source("../bin/chunk-options.R")
+knitr_fig_path("04-testthat-")
+```
+
+### Auto-testing functions with the `testthat` package
+
+Computer code evolves. As you just saw, functions need to be updated
+when new use-cases appear, or new goals need to be achieved, or
+sped up when more data needs to be crunched, or cleaned up to make their code
+more readable for collaborators, reviewers, etc. You probably know the saying
+"Never change a running system!" We surely invested a lot of time already to make
+sure our functions work fine now. It is natural to be cautious about changing
+computer code and it rightly shouldn't be done on a whim.
+
+However, as you have probably learned in the Git lesson, branching is one way to
+try out code changes in a way that allows you to recover from a mistake, and only
+merge successful changes. Automatic tests are another way to "span a safety net",
+and in R, the [`testthat` package][testthat] is commonly used. Install it through
+RStudio's `Packages` panel or execute `install.packages("testthat")` in the console.
+
+> ## Loading packages in RStudio or the console
+>
+> Checking and unticking a box in RStudio's `Packages` panel is the same as
+> executing `library("…")` and `detach("…")` in the console. Note how your mouse
+> interaction with the panel sends commands, or how your console commands affect
+> the panel. The same is true for `install.packages()` and `remove.packages()`.
+{: .callout}
+
+A `testthat` case is composed of the following elements:
+
+```{r center-test}
+library("testthat")
+test_that("centering works", { # function call with a descriptive string
+ expect_equal( # expectation, which compares…
+ object = center(data = c(1, 2, 3), desired = 0), # … the function's actual output…
+ expected = c(-1, 0, 1) # … with our expected result
+ )
+})
+```
+
+Don't worry that there is no output when you execute one or more `expect_equal()`
+statement(s), or the whole `test_that()` block. In good UNIX
+tradition, `testthat` will only bother you in case some expectations are _not_
+met, i.e. one or more unit tests fail.
+
+> ## Adding more test-cases
+>
+> When we tested our `rescale()` function interactively, we used several different
+> numeric examples. Search your script and/or your console history in RStudio to
+> find these examples and convert them into more `expect_equal(…)` test-cases.
+
+
+> ## Testing our rescaling functions
+>
+> Apply the above example of converting the examples into unit tests in the
+> `rescale.R` file as well.
+>
+> > ## Solution
+> > ~~~
+> > library("testthat")
+> > test_that("rescaling works", {
+> > expect_equal(rescale(c(1, 2, 3)), c(0.0, 0.5, 1.0))
+> > expect_equal(rescale(c(1, 2, 3, 4, 5)), c(0.0, 0.25, 0.5, 0.75, 1.0))
+> > })
+> > ~~~
+> > {: .r}
+> {: .solution}
+>
+> Think about the [DRY principle]({{ page.root }}/03-func-R/#composing-functions).
+> Is it necessary to keep the `@examples` in the documentation when you are using
+> them in the tests, or vice versa? Which considerations would help you decide?
+>
+> > ## Hint
+> >
+> > Examples are a good starting point, but: Tests help you ensure semantically,
+> > mathematically and scientifically correct code. This may require covering
+> > edge-cases, errors, etc. with dedicated tests. These may not be helpful,
+> > instructive examples for your users. The examples should teach how your
+> > functions can be applied to solve your users' problems.
+> {: .solution}
+{: .challenge}
+
+In order to get very quick feedback on your code, consider activating RStudio's
+`Source on Save` function and getting used to pressing Ctrl+S
+whenever you think your code is ready to be saved. If there are any errors, read
+the error message, investigate and correct either your code or the test and
+Ctrl+S again.
+
+Once all your tests are green, a good moment has come to also commit your tests
+for `center.R` and `rescale.R`. Pick a self-explanatory commit message ;-)
diff --git a/_episodes_rmd/04-making-packages-R.Rmd b/_episodes_rmd/05-making-packages-R.Rmd
similarity index 92%
rename from _episodes_rmd/04-making-packages-R.Rmd
rename to _episodes_rmd/05-making-packages-R.Rmd
index 385e49251..2f2697680 100644
--- a/_episodes_rmd/04-making-packages-R.Rmd
+++ b/_episodes_rmd/05-making-packages-R.Rmd
@@ -22,7 +22,7 @@ source: Rmd
```{r, include = FALSE}
source("../bin/chunk-options.R")
-knitr_fig_path("04-making-packages-R-")
+knitr_fig_path("05-making-packages-R-")
```
Why should you make your own R packages?
@@ -94,16 +94,28 @@ Suggestion: organize in a logical manner so that you know which file holds which
### `DESCRIPTION` file
+We used RStudio's import process to include the `.R` files we already had. However, FAIRer
+(because richer in metadata) `DESCRIPTION` files can be generated with a
+[helper package called `usethis`][usethis]. Again, install it with RStudio or
+the console, then load it and execute
+
+```{r use_desc, eval=FALSE}
+use_description()
+```
+
~~~
Package: PackageName
Type: Package
-Title: What the Package Does (Title Case)
Version: 0.1.0
-Author: Who wrote it
-Maintainer: The package maintainer
-Description: More about what it does (maybe more than one line)
+Title: What the Package Does (One Line, Title Case)
+Authors@R:
+ person(given = "First",
+ family = "Last",
+ role = c("aut", "cre"),
+ email = "first.last@example.com")
+Description: What the package does (one paragraph).
Use four spaces when indenting paragraphs within the Description.
-License: What license is it under?
+License: What license it uses
Encoding: UTF-8
LazyData: true
~~~
@@ -175,7 +187,7 @@ After `Install and Restart`-ing again, looking up the documentation should work.
What exactly does `roxygen2` do? It reads lines that begin with `#'` as the function documentation for your package.
Descriptive tags are preceded with the `@` symbol. For example, `@param` has information about the input parameters for the function.
-### Exporting "user-level" function
+### Exporting "user-level" functions
We haven't talked about the `NAMESPACE` file yet! It belongs to the package skeleton,
and was set up by RStudio with an `exportPattern`. Any file name in `R/` that
@@ -193,7 +205,7 @@ Learn more about this from the ["R packages" book][r-pkgs-name].
### Finishing up
-Please take a look at RStudio's `Files` panes now. The `/man` directory should
+Please take a look at RStudio's `Files` panes now. The `man/` directory should
now contain one LaTeX-like formatted `.Rd` file for each function.
In case you learned about Git already, also view the `.Rd` files in RStudio's
@@ -231,4 +243,3 @@ your personal package. A good resource to find more guidance on packaging R code
is [ROpenSci's onboarding guide][ROSPG].
[ROSPG]: https://onboarding.ropensci.org/packaging_guide.html
-[ep-func]: {{ page.root }}/03-func-R/
diff --git a/_episodes_rmd/05-testthat.Rmd b/_episodes_rmd/06-pkg-tests-TDD.Rmd
similarity index 51%
rename from _episodes_rmd/05-testthat.Rmd
rename to _episodes_rmd/06-pkg-tests-TDD.Rmd
index 51c4ca8a5..10feb0df9 100644
--- a/_episodes_rmd/05-testthat.Rmd
+++ b/_episodes_rmd/06-pkg-tests-TDD.Rmd
@@ -1,14 +1,13 @@
---
-title: "Unit-Testing And Test-driven Development"
-teaching: 45
-exercises: 15
+title: "Packaging Tests and Test-Driven Development"
+teaching: 30
+exercises: 10
questions:
-- "What is the benefit of unit-testing my code?"
-- "How do I create and run unit tests?"
-- "Why would I change my code after I got it to run?"
+- "How are test-cases organised in an R package?"
+- "Which tools help me organise my tests"
objectives:
-- "Formalise documented examples as tests."
-- "Use testthat functions to create and run tests."
+- "Let the usethis package create test files and folder structures"
+- "Use RStudio or testthat shortcuts to run all tests at once"
keypoints:
- "Changing code is not always necessary, but often useful."
- "Tests provide a safety net for changing code."
@@ -18,35 +17,12 @@ source: Rmd
```{r, include = FALSE}
source("../bin/chunk-options.R")
-knitr_fig_path("05-testthat-R-")
+knitr_fig_path("06-pkg-tests-TDD-")
```
-### Unit testing with the `testthat` package
-
-Computer code evolves. Functions may need to be updated to new usage goals,
-sped up when more data needs to be crunched, or cleaned up to make their code
-more readable for collaborators, reviewers, etc. You probably know the saying
-"Never change a running system!" We surely invested a lot of time already to make
-sure our functions work fine now. It is natural to be cautious about changing
-computer code and it rightly shouldn't be done on a whim.
-
-However, as you have probably learned in the Git lesson, branching is one way to
-try out code changes in a way that allows you to recover from mistakes, and only
-merge successful changes.
-
-Unit tests are another way to "span a safety net", and in R, the [`testthat` package][testthat]
-is commonly used. Because adding tests requires an expansion of the folder and file
-structure of an R package, we are going to use a helper package to do this for
-us: [`usethis`][usethis].
-
-```{r, eval=FALSE}
-install.packages(c("testthat", "usethis"))
-# several can be combined, but only for installations
-library("testthat")
-library("usethis")
-```
-
-Afterwards, type:
+Because moving the test cases into their own files in a certain way
+requires an expansion of the folder and file
+structure of our R package, we are going to [`usethis`][usethis] again:
```{r use_test, eval=FALSE}
use_test("center")
@@ -63,77 +39,27 @@ A new file should be created and the console should show:
~~~
{: .source}
-The file is pre-filled with a little example. While
-following the explanation of each part, please delete the contents of that example
-test in order to prepare inserting our own. The string within `test_that("…", …)`
-is an explanation of what this test actually tests. In case of our `center()`
-function we expect that "centering works".
-
-Next comes a specific `expect_`ation, usually calling a given function with
-a defined set of arguments (inputs) to check whether that result is `_equal`
-to a known return value (outputs).
-In the function comments, we have already formalised a few of these as examples.
-Copy-and-paste them into the test file, remove the `# should return [1]`
-indicators of the expected results, and wrap the result values into a `c()` to
-enable R to compare the expected values with the output of the two `center()` tests.
-
-```{r center-test, eval=FALSE}
-test_that("centering works", {
- expect_equal(center(c(1, 2, 3), 0), c(-1, 0, 1))
-})
-```
+The file is pre-filled with a little example. Remove it, then cut our test case
+out of `center.R` and paste it here. Repeat this with the test in `rescale.R`.
+You could now execute the tests interactively, but of course, switching between
+files and manually executing the test code is not necessary.
-Don't worry that there is no output when you execute either one or both of the
-`expect_equal()` statements, or the whole `test_that()` block. In good UNIX
-tradition, `testthat` will only bother you in case some expectations are _not_
-met, i.e. one or more unit tests fail.
-
-> ## Testing our rescaling functions
->
-> Apply the above example of converting the examples into unit tests for the
-> `rescale` function as well.
->
-> > ## Solution
-> > ~~~
-> > test_that("rescaling works", {
-> > expect_equal(rescale(c(1, 2, 3)), c(0.0, 0.5, 1.0))
-> > expect_equal(rescale(c(1, 2, 3, 4, 5)), c(0.0, 0.25, 0.5, 0.75, 1.0))
-> > })
-> > ~~~
-> > {: .r}
-> {: .solution}
->
-> Think about the [DRY principle]({{ page.root }}/03-func-R/#composing-functions).
-> Is it necessary to keep the `@examples` in the documentation when you are using
-> them in the tests? Which factors would you consider in your decision?
->
-> > ## Hint
-> >
-> > Examples are a good starting point, but not every test case will be a useful
-> > example, and vice versa. The examples help users to figure out how to apply
-> > your functions. The test cases help the package developer(s) improve the code.
-> >
-> {: .solution}
-{: .challenge}
+To automatically run all our packaged tests, we can use RStudio's `Build` pane the
+`More > Test Package` menu option, or [`testthat`'s `auto_test_package()`][tt-atp]
+in the console. Notice the hopefully all green and `OK` `Results`.
-To conclude this section about creating unit tests, let's again commit our results,
+To conclude this section about packaging tests, let's again commit our results,
for example as "Span safety net for TDD".
-
### Test-driven development (TDD)
Remember that we updated `rescale()` with lower and upper bounds and default
-values at the end of [the functions episode][ep-func]? We had to manually test that change with a
-new example back then. We were repeating ourselves a bit more often than necessary
-back then, weren't we? Of course, there are ways to automate the testing of code
-changes, which gives you quick feedback whether your changes worked, or broke
-anything.
-
-To do that, we use `testthat`'s `auto_test_package()`
-in the console, or in RStudio's `Build` pane the `More > Test Package` menu option,
-and notice the hopefully all green and `OK` `Results`.
+values at the end of [the functions episode][ep-func]? We either had to manually
+test that change with a new example, or create another test case.
+We were repeating ourselves a bit more often than necessary
+back then, weren't we?
-With this safety net enabled, we will first update `test-center.R`, and then
+With the "safety net"" enabled, we will first update `test-center.R`, and then
update the code in `center.R` with the `desired = 0` default argument. This strategy of (re)writing (new)
tests before (re)writing the code-to-be-tested is called
"[test-driven design/development][TDD]". It is intended to reduce confirmation
@@ -226,5 +152,3 @@ our time and energy into testing code improvement, while recovering from mistake
[ep-func]: {{ page.root }}/03-func-R/
[refactoring]: https://en.wikipedia.org/wiki/Code_refactoring
-[usethis]: https://usethis.r-lib.org/
-[testthat]: https://testthat.r-lib.org/
diff --git a/_episodes_rmd/06-tidy-data.Rmd b/_episodes_rmd/07-tidy-data.Rmd
similarity index 79%
rename from _episodes_rmd/06-tidy-data.Rmd
rename to _episodes_rmd/07-tidy-data.Rmd
index 993077454..bb9fe2055 100644
--- a/_episodes_rmd/06-tidy-data.Rmd
+++ b/_episodes_rmd/07-tidy-data.Rmd
@@ -19,7 +19,7 @@ source: Rmd
```{r, include = FALSE}
source("../bin/chunk-options.R")
-knitr_fig_path("06-tidy-data-R-")
+knitr_fig_path("07-tidy-data-R-")
```
## Tidying our inflammation datasets
@@ -159,3 +159,38 @@ the documentation file, what is left to do in our little personal package?
> {: .solution}
{: .challenge}
+## Checking CSVs for structural validity
+
+This was an average case of cleaning a dataset. On the one hand, we had to label
+columns (`r names(dat_long)`). On the other hand, the data itself was easily
+tidied. You have probably encountered many other `.csv` files which were messy
+in their own ways. Two useful tools to find structural problems in CSVs are
+[CSVLint.io][csvl] and [try.goodtables.io][gt].
+
+> ## Challenge: Search for structural problems in both the initial `inflammation.csv` and in your tidied version
+>
+> How many errors or warnings does that produce? Then,
+> `write.csv(dat_long, "inflammation-tidy.csv")`
+> and check that version. A few warnings may be left. If yes, which one(s)?
+> How would you approach eliminating those?
+>
+> > ## Solutions
+> >
+> > 1. [CSVLint.io][csvl] should report "Structural problem: Possible title row detected"
+> > and [try.goodtables.io][gt] should report "1x Blank Header".
+> > 1. View `inflammation-tidy.csv` in RStudio, or a text editor and read `?write.csv`.
+> > 1. An empty `"",` in the beginning of the first row indicates that we need to
+> > set `row.names = FALSE`. Row names are a bit weird, because they will often
+> > be numbers, but not necessarily will the number you see with `tail(...)`
+> > be equal to the number of rows. Always use `nrow(...)` to count those. We
+> > recommend to move actually useful information about a row / observation into
+> > its own column.
+> > 1. Depending on your operating system, you could set `eol = "\r\n"` to meet
+> > the most common CSV format specification ([RFC 4180]).
+> >
+> {: .solution}
+{: .challenge}
+
+[csvl]: https://csvlint.io/
+[gt]: https://try.goodtables.io/
+[RFC 4180]: https://tools.ietf.org/html/rfc4180
diff --git a/_includes/links.md b/_includes/links.md
index 2fb9f74cf..5038983f5 100644
--- a/_includes/links.md
+++ b/_includes/links.md
@@ -34,5 +34,8 @@
[rubygems]: https://rubygems.org/pages/download/
[styles]: https://github.com/swcarpentry/styles/
[swc-releases]: https://github.com/swcarpentry/swc-releases
+[testthat]: https://testthat.r-lib.org/
+[tt-atp]: https://testthat.r-lib.org/reference/auto_test_package.html
+[usethis]: https://usethis.r-lib.org/
[workshop-repo]: {{ site.workshop_repo }}
[yaml]: http://yaml.org/