From 4a026c9e9a82f163f2ed65ff4c10359f02ad8be0 Mon Sep 17 00:00:00 2001 From: Bearbbcjtc Date: Fri, 3 Apr 2026 11:01:08 -0400 Subject: [PATCH 1/3] add anagine gitops --- ardac1prd/portal.ardac.org/values.yaml | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/ardac1prd/portal.ardac.org/values.yaml b/ardac1prd/portal.ardac.org/values.yaml index 0a41203..6eabf19 100644 --- a/ardac1prd/portal.ardac.org/values.yaml +++ b/ardac1prd/portal.ardac.org/values.yaml @@ -337,6 +337,13 @@ portal: "name": "Profile", "color": "#A2A2A2", "tooltip": "" + }, + { + "icon": "anagine", + "link": "/anagine", + "name": "Anagine", + "color": "#A2A2A2", + "tooltip": "AI-powered data analysis" } ] }, From e4dbdfdcc77689d8533ad20dc68e6bd6de08c8e2 Mon Sep 17 00:00:00 2001 From: Bearbbcjtc Date: Fri, 3 Apr 2026 21:42:08 -0400 Subject: [PATCH 2/3] add marital and education etl mapping --- ardac1prd/portal.ardac.org/values.yaml | 14 +++++++++----- 1 file changed, 9 insertions(+), 5 deletions(-) diff --git a/ardac1prd/portal.ardac.org/values.yaml b/ardac1prd/portal.ardac.org/values.yaml index 6eabf19..7cb9903 100644 --- a/ardac1prd/portal.ardac.org/values.yaml +++ b/ardac1prd/portal.ardac.org/values.yaml @@ -518,6 +518,8 @@ portal: "race", "actarm", "ethnicity", + "marital", + "education", "age_at_index", "drinking_frequency", "aki_status", @@ -858,7 +860,7 @@ portal: "title": "Sex" }, "race": { - "chartType": "pie", + "chartType": "bar", "title": "Race" }, "ethnicity": { @@ -1037,7 +1039,7 @@ portal: "title": "Sex" }, "race": { - "chartType": "pie", + "chartType": "bar", "title": "Race" }, "PI_name": { @@ -1710,6 +1712,8 @@ etl: - None: None - name: year_of_birth - name: age_at_index + - name: marital + - name: education - path: audits props: - name: drinking_frequency @@ -1783,7 +1787,7 @@ etl: - Heavy Drinker with Alcoholic Hepatits: AH cases - Heavy Drinker without Alcoholic Hepatits: Heavy Drinking Controls - Healthy Donor: Healthy Controls - - path: demographics[gender,race,ethnicity,year_of_birth,age_at_index] + - path: demographics[gender,race,ethnicity,marital,education,year_of_birth,age_at_index] value_mappings: - female: Female - male: Male @@ -1847,7 +1851,7 @@ etl: - path: follow_ups[follow_up_id:submitter_id, visit_day].cases[pat_id:submitter_id, case_arm:actarm].studies[study_name, study_id:submitter_id] - path: follow_ups.cases[pat_id:submitter_id, case_arm:actarm, case_group:cohort, study_site, aki_status, days_180_aki, days_180_survival, days_90_aki, days_90_survival, days_to_aki] - path: labs[lab_id:submitter_id, lab_name:name_of_institute, PI_name] - - path: follow_ups.demographics[gender, race, ethnicity, year_of_birth, age_at_index] + - path: follow_ups.demographics[gender, race, ethnicity, marital, education, year_of_birth, age_at_index] - name: ardac_lab_result doc_type: molecular_test @@ -1856,7 +1860,7 @@ etl: parent_props: - path: follow_ups[follow_up_id:submitter_id, visit_day].cases[pat_id:submitter_id, case_arm:actarm].studies[study_name, study_id:submitter_id] - path: follow_ups.cases[pat_id:submitter_id, case_arm:actarm, case_group:cohort, study_site, aki_status, days_180_aki, days_180_survival, days_90_aki, days_90_survival, days_to_aki] - - path: follow_ups.demographics[gender, race, ethnicity, year_of_birth, age_at_index] + - path: follow_ups.demographics[gender, race, ethnicity, marital, education, year_of_birth, age_at_index] - path: aliquots.labs[lab_id:submitter_id, lab_name:name_of_institute, PI_name] props: - name: project_id From 56fc12ce90a2ec47dff7b8a76e4ff0b883b22dde Mon Sep 17 00:00:00 2001 From: Bearbbcjtc Date: Fri, 3 Apr 2026 21:46:45 -0400 Subject: [PATCH 3/3] disable guppy --- ardac1prd/portal.ardac.org/values.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ardac1prd/portal.ardac.org/values.yaml b/ardac1prd/portal.ardac.org/values.yaml index 7cb9903..1e6e476 100644 --- a/ardac1prd/portal.ardac.org/values.yaml +++ b/ardac1prd/portal.ardac.org/values.yaml @@ -99,7 +99,7 @@ grafana: enabled: false guppy: - enabled: true + enabled: false indices: - index: ardac_case type: case