forked from OHDSI/Capr
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathDESCRIPTION
More file actions
62 lines (62 loc) · 1.79 KB
/
DESCRIPTION
File metadata and controls
62 lines (62 loc) · 1.79 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
Package: Capr
Title: Cohort Definition Application Programming
Version: 2.0.4
Authors@R: c(
person("Martin", "Lavallee", , "mdlavallee92@gmail.com", role = c("aut", "cre")),
person("Adam", "Black", , "black@ohdsi.org", role = "aut")
)
Description: Provides a programming language for defining OHDSI cohort definitions in R to use in studies for Observational
Health Data Sciences and Informatics (OHDSI). The functions in 'Capr' allow for the programmatic creation of
OHDSI concept sets and cohorts that can be serialized to 'Atlas/CIRCE-BE' compatible 'json' files or to 'OHDSI-SQL'.
'Capr' functions can be used to create, save, and load component parts to a cohort definition allowing
R programmers to easily reuse cohort logic. 'Capr' provides tools to create a large number of OHDSI cohorts
programmatically while also helping bridge the gap between human readable descriptions of clinical phenotypes
and their computational implmentation.
License: Apache License (>= 2)
URL: https://ohdsi.github.io/Capr, https://github.com/OHDSI/Capr
BugReports: https://github.com/OHDSI/Capr/issues
Encoding: UTF-8
RoxygenNote: 7.2.3
Depends:
R (>= 3.5.0),
Imports:
magrittr (>= 1.5.0),
jsonlite,
methods,
purrr (>= 1.0.1),
rlang,
dplyr,
tidyr,
checkmate,
tibble,
readr,
stringr,
glue,
cli,
digest,
fs,
lubridate,
DBI,
DatabaseConnector,
SqlRender,
generics
Suggests:
testthat (>= 3.0.0),
knitr,
rmarkdown
VignetteBuilder: knitr
Config/testthat/edition: 3
Collate:
'Capr.R'
'conceptSet.R'
'query.R'
'window.R'
'criteria.R'
'exit.R'
'cohort.R'
'attributes-concept.R'
'attributes-logic.R'
'attributes-nested.R'
'attributes-op.R'
'collectCodesetId.R'
'utils.R'