This repository was archived by the owner on Nov 16, 2021. It is now read-only.
This repository was archived by the owner on Nov 16, 2021. It is now read-only.
VM for bioinformatic workflow episode #1
Description
I have to create a Docker image for the bioinformatic workflow part of the RNA-seq course. This will be used to make a demo of what's happening.
This image has to contain:
- fastp
- STAR
- featureCounts
A set of fastq files with a subset number of reads (e.g. 5M reads) and a fasta file containing chromosome 1 of Arabidopsis thaliana.