2.12.0

Shorter runtime on genomes having a large number of contigs.

2.11.0

"CRAM" support

2.10.0

Faster signal extraction

higher sensitivity of tandem and inverted duplications

2.8.1

The discordant pair size cutoff is not 99.9 percentile

Minor fixes to the genotyping of SV

2.8.0

I made a proper error message for non-supported file input

The discordant pair size limit is now determined using percentile.

I added tagged singularity recipes

The default read quality treshold is now 5 mapq

2.7.1

Removed the pysam dependency

The span coverage is now computed while extracting the signals from the bam file

2.6.0

Merge pull request #61 from J35P312/master

2.6.0

2.5.0

Added quality value through non-parametric sampling

Improved the zygosity estimate of balanced variation

reduced the bin size to 50bp, this should improve the variant estimation of small CNVs

slightly reduced the maxRSS

TIDDIT now requires pysam

2.3.0

A slightly faster version of TIDDIT

2.2.5

improved readme file

changed the expected links2 filter a bit

new default settings

improved singularity image, which is available through singularity hub