Expected output
Running SPAdes on 13 genes
time parallel --eta -j 4 spades.py --only-assembler --threads 1 --cov-cutoff 8 --12 {}/{}_interleaved.fasta -o {}/{}_spades :::: spades_genelist.txt > spades.log
Computers / CPU cores / Max jobs to run
1:local / 8 / 4
If Error:
time parallel --eta -j 4 spades.py --only-assembler --threads 1 --cov-cutoff 8 --12 {}/{}_interleaved.fasta -o {}/{}_spades :::: spades_genelist.txt > spades.log
parallel: Error: Command line too long (118 >= 0) at input -12: gene079
real 0m0.237s
Expected output
Running SPAdes on 13 genes
time parallel --eta -j 4 spades.py --only-assembler --threads 1 --cov-cutoff 8 --12 {}/{}_interleaved.fasta -o {}/{}_spades :::: spades_genelist.txt > spades.log
Computers / CPU cores / Max jobs to run
1:local / 8 / 4
If Error:
time parallel --eta -j 4 spades.py --only-assembler --threads 1 --cov-cutoff 8 --12 {}/{}_interleaved.fasta -o {}/{}_spades :::: spades_genelist.txt > spades.log
parallel: Error: Command line too long (118 >= 0) at input -12: gene079
real 0m0.237s