Reference genomes

[sjannielefevre]

Hi :)

It would be useful for my research group to have the following added (both are on Ensembl):

common carp (common_carp_genome, INSDC Assembly GCA_000951615.2):
http://ftp.ensembl.org/pub/release-104/fasta/cyprinus_carpio/

goldfish (ASM336829v1, INSDC Assembly GCA_003368295.1):
http://ftp.ensembl.org/pub/release-104/fasta/carassius_auratus/

I saw in your reply to Monica that you wanted more information than the name, so if you need more than the information above just let me know.

Thanks!

Sjannie

[Sabryr]

Thank you for providing direct download links. How do you expect this references to be used? e.g. for balst, bwa indices ...

[sjannielefevre]

We will use it for a variety of things, I have previously used STAR for mapping RNAseq reads, but I think BWA is also relevant.

[Sabryr]

Thank you for the details