Link unavailable in Aging LTR

[sr-c]

Thank you for your helpful pipeline about aging LTR insertions.

But the scripts linked at the end are not accessible. Is the repository moved to other place? If that is still okay, please update the link.

[U201412486]

Hi, @sr-c
How do you age LTR insertions later?
Thanks,

[sr-c]

Hi, @sr-c
How do you age LTR insertions later?
Thanks,

@U201412486 Try LTR_retriever, with -u setting the neutral mutation rate.

[U201412486]

@sr-c ,how was your LTR file produced ? My LTR file is produced by repeatmasker,which may be not suitble for LTR_retriever.What is your advice ?
many thanks,

[U201412486]

@sr-c ,and how do you set the the neutral mutation rate in your condition?