mkdocs.yml

# MkDocs configuration for Research Data and Methods Workshop Series
site_name: "Research Data and Methods Workshop Series"
site_description: "Workshop series on research data management, ethics, literature management, and corpus linguistics tools."
site_url: "https://sfb1252.github.io/talks"

# Repository information
repo_url: "https://github.com/sfb1252/talks"
repo_name: "sfb1252/talks"

# Documentation directory
docs_dir: "docs"

# Theme configuration
theme:
  name: "material"
  version: "9.6.18"
  language: "en"
  logo: "logo.png"
  favicon: "logo.png"
  palette:
    # University of Cologne Corporate Design Colors
    # Primary: University Blue (#005176)
    # Accent: Turquoise (#009dcc)
    primary: "blue"
    accent: "cyan"
  font:
    text: "Albert Sans"
    code: "Fira Code"
  features:
    - navigation.tabs
    - navigation.sections
    - navigation.expand
    - toc.integrate
    - search.suggest
    - search.highlight
    - content.tabs.link
    - content.code.annotation
    - content.code.copy

# Plugins
plugins:
  - search
  - glightbox
  - minify:
      minify_html: true
  - git-revision-date-localized:
      enable_creation_date: true
      type: timeago
  - git-committers:
      repository: sfb1252/talks
      branch: main
      token: !ENV MKDOCS_GIT_COMMITTERS_APIKEY # (1)! 
 
# Customization
extra:
  generator: false
  social:
    - icon: "fontawesome/solid/university"
      link: "https://www.uni-koeln.de"
      name: "Universität zu Köln"
    - icon: "fontawesome/solid/flask"
      link: "https://sfb1252.uni-koeln.de"
      name: "CRC 1252 - Prominence in Language"
  # University of Cologne footer links
  copyright: |
    &copy; 2024 SFB 1252 - Universität zu Köln<br>
    <a href="https://sfb1252.uni-koeln.de" target="_blank">SFB 1252 Homepage</a> | 
    <a href="https://www.uni-koeln.de" target="_blank">Universität zu Köln</a>

# Extensions
markdown_extensions:
  - pymdownx.highlight:
      anchor_linenums: true
  - pymdownx.inlinehilite
  - pymdownx.snippets
  - pymdownx.superfences
  - pymdownx.tabbed:
      alternate_style: true
  - pymdownx.emoji
  - attr_list
  - md_in_html
  - tables
  - footnotes

# Navigation structure
nav:
  - Home: "index.md"
  - Workshops:
      - Overview: "workshops/index.md"
      - "01 - Good Academic Practice": "workshops/01-good-academic-practice/index.md"
      - "02 - Research Data Management": "workshops/02-research-data-management/index.md"
      - "03 - Ethics Approval": "workshops/03-ethics-approval/index.md"
      - "04 - Literature Management": "workshops/04-literature-management/index.md"
      - "05 - Annotation & Corpus Tools": "workshops/05-annotation-corpus-tools/index.md"
      - "06 - Preregistration": "workshops/06-preregistration/index.md"
      - "07 - Coding in R Basics": "workshops/07-coding-r-basics/index.md"
      - "08 - Online Experiments": "workshops/08-online-experiments/index.md"
      - "09 - Archiving Session": "workshops/09-archiving-session/index.md"
      - "10 - Coding in Python/VSCode and LLMs": "workshops/10-coding-python-vscode-llms/index.md"
      - "11 - Bayesian Regression Models": "workshops/11-bayesian-regression-models/index.md"
      - "12 - Computational Reproducibility Session using R": "workshops/12-computational-reproducibility-r/index.md"
      - "13 - Bayesian Model Comparison Using Cross-Validation": "workshops/13-bayesian-model-comparison-cv/index.md"
      - "14 - Bayesian Hypothesis Testing Using ROPE": "workshops/14-bayesian-rope-testing/index.md"
      - "15 - Bayes Factor": "workshops/15-bayes-factor/index.md"
      - "16 - Taking Care of Your Data: From Backups to Publication": "workshops/16-data-management-lifecycle/index.md"
      - "17 - Shiny: Creating Dynamic Web Apps from Data": "workshops/17-shiny-web-apps/index.md"
      - "18 - Sample Size and Power Analysis": "workshops/18-power-analysis/index.md"
      - "19 - Let's Rant: Open Debugging": "workshops/19-open-debugging/index.md"
      - "20 - Advanced R: Working with Data Frames": "workshops/20-advanced-r-dataframes/index.md"
  - MediaPipe: "mediapipe/index.md"
  - Resources:
      - Overview: "resources/index.md"
      - Onboarding: "resources/onboarding/README.md"
      - Archiving: "resources/archiving/archiving-faq.md"
      - LLM Workshop (December 2025): "resources/llm-workshop/llm-workshop.md"
      - SFB 1252 Retreat Materials (July 2025): "resources/retreat/README.md"
      - Additional Links: "resources/additional-links/additional-links.md"
  - Schedule:
      - Winter 2025-26 (Archived): "agenda/winter-2025-26-schedule.md"
      - Summer 2025 (Archived): "agenda/summer-2025-schedule.md"
      - Summer 2026 (Draft): "agenda/summer-2026-draft-schedule.md"

  # - Development:
  #     - Setup: "development/setup.md"
  #     - Tools: "development/tools.md"
  #     - VS Code Setup: "development/vscode-setup.md"
  - Matrix:
      - Space Setup: "matrix/space-setup.md"
      - Admin Checklist: "matrix/admin-checklist.md"
  - About:
      - Contributing: "about/contributing.md"
      - Presenter Resources: "resources/presenter-resources/README.md"
      - GitHub Setup: "about/github-setup.md"
      - AI-Assisted Development: "about/ai-assisted-development.md"

# Additional CSS and JS
extra_css:
  - "stylesheets/uzk-corporate-design.css"
  - "stylesheets/custom.css"

extra_javascript:
  - "javascript/custom.js"