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关于计算空间网络时出现------The graph contains 0 edges, 929 cells. 0.0000 neighbors per cell on average. #23

@BioinAI

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@BioinAI

您好,当我在visium的数据集上应用STAGATE进行空间网络计算时,出现了0条边以及空白图,这是为什么呢?我该怎么修改?希望得到您的帮助!相关代码和图如下:
image
代码:for sample_folder, adata in adata_dict.items():
STAGATE.Cal_Spatial_Net(adata, rad_cutoff=50)
STAGATE.Stats_Spatial_Net(adata)

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