JointSNVMix installation in Arch linux

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What steps will reproduce the problem?
1.Installing JointSNVMix-0.7.5 and JoinSNVMix-0.8-b2

What is the expected output? What do you see instead?

Expected output is proper installation and able to run jsm.py. However, when I 
try to install JointSNVMix-0.7.5, I get the following error: command 'gcc' 
failed with exit status 1. This seems to be the problem associated with python 
development headers, but it should be installed.

When installing JointSNVMix-0.8-b2, there seems to be some sort of syntax 
errors occurring and I get the following SyntaxError: invalid syntax. I do get 
jsm.py installed in my path, but when I run jsm.py train -h, I get the 
following RuntimeError: maximum recursion depth exceeded in comparison, and no 
list of option is generated.

What version of the product are you using? On what operating system?

I tried both JoinSNVMix-0.7.5 and JointSNVMix-0.8-b2. I believe I have all the 
dependencies installed properly, but please let me know if the problem seems to 
be coming from them. I'm using Arch Linux at the moment, but I remember getting 
similar errors in Mac OS X, which I gave up trying to install few weeks ago.

Please provide any additional information below.

List of dependencies/version numbers
Python: python-3.3.2-2 (I think this might be the problem.. I'm reading python 
2 and 3 are not compatible... any thoughts?)
Cython: python-cython 0.15.1-2
Pysam: python-pysam 0.7.5-2
Alglib: alglib 3.7.0-1

Thanks!

David

Original issue reported on code.google.com by DavidK...@gmail.com on 12 Nov 2013 at 7:33