From 4c8e27f096201a791a33f340fa6b54969a0b0220 Mon Sep 17 00:00:00 2001
From: Michiel Tukker <michiel.tukker@deltares.nl>
Date: Thu, 30 May 2024 09:54:37 +0200
Subject: [PATCH 01/29] changed version list to list of strings

Python 3.10 is interpreted as 3.1 due to issue in yaml interpretation: https://github.com/actions/runner/issues/1989
---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 24bf1b0..2f2157d 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -7,7 +7,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.8, 3.10, 3.11]
+        python-version: ['3.8', '3.10', '3.11']
 
     name: Test cookiecutter template
     steps:

From a10374e10d6d4e9e9b5a97a60b53a27f4d26a1d5 Mon Sep 17 00:00:00 2001
From: Michiel Tukker <michiel.tukker@deltares.nl>
Date: Thu, 30 May 2024 09:54:37 +0200
Subject: [PATCH 02/29] changed version list to list of strings

Python 3.10 is interpreted as 3.1 due to issue in yaml interpretation: https://github.com/actions/runner/issues/1989
---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 24bf1b0..2f2157d 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -7,7 +7,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.8, 3.10, 3.11]
+        python-version: ['3.8', '3.10', '3.11']
 
     name: Test cookiecutter template
     steps:

From 7258a65cc8ed41ad87192886f88253508d94c48a Mon Sep 17 00:00:00 2001
From: Michiel Tukker <michiel.tukker@deltares.nl>
Date: Thu, 30 May 2024 10:07:56 +0200
Subject: [PATCH 03/29] Cookiecutter shouldn't prompt for user input

---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 2f2157d..9b42f7a 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -22,7 +22,7 @@ jobs:
       - name: Run cookiecutter
         run: |
           pip install cookiecutter
-          cookiecutter $GITHUB_SERVER_URL/$GITHUB_REPOSITORY -c $GITHUB_SHA
+          cookiecutter --no-input $GITHUB_SERVER_URL/$GITHUB_REPOSITORY -c $GITHUB_SHA
           cd design_toolkit_application
 
       - name: flake8 Lint

From b86bf04f9ce00308a31b5dc4cd9b452f4303e1d0 Mon Sep 17 00:00:00 2001
From: Michiel Tukker <michiel.tukker@deltares.nl>
Date: Thu, 30 May 2024 13:08:38 +0200
Subject: [PATCH 04/29] Fixed template error in github action, causing template
 instatntiation to fail

---
 .../.github/workflows/publish_container_image.yml      | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
index 9191860..129e54e 100644
--- a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
+++ b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
@@ -13,19 +13,19 @@ jobs:
      uses: actions/checkout@v3
      with:
       fetch-depth: 0       
-
+{% raw %}
    - name: Login to GitHub Container Registry
      uses: docker/login-action@v1
      with:
        registry: ghcr.io
-       username: {% raw %}${{ github.actor }}{% endraw %}
-       password: {% raw %}${{ secrets.GITHUB_TOKEN }}{% endraw %}
-
+       username:  ${{ github.actor }} 
+       password:  ${{ secrets.GITHUB_TOKEN }}
+{% endraw %}
    - name: Build the container image
      run: |
       docker build . --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:${{github.ref_name}}
       docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest
-      docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:${{github.ref_name}}
+      docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
 {%- else -%}
 
 {% endif %}

From 9b6ff3e0d56d90c7979825871c424e1ce5bc6f08 Mon Sep 17 00:00:00 2001
From: Michiel Tukker <michiel.tukker@deltares.nl>
Date: Thu, 30 May 2024 13:12:20 +0200
Subject: [PATCH 05/29] missed one

---
 .../.github/workflows/publish_container_image.yml               | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
index 129e54e..76a6d95 100644
--- a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
+++ b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
@@ -23,7 +23,7 @@ jobs:
 {% endraw %}
    - name: Build the container image
      run: |
-      docker build . --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:${{github.ref_name}}
+      docker build . --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
       docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest
       docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
 {%- else -%}

From d587c251a630b2e05430e9740e8906591ad30da2 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Mon, 24 Jun 2024 17:11:10 +0200
Subject: [PATCH 06/29] Allow pytest suite to be empty.

---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 9b42f7a..34f43f8 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -55,7 +55,7 @@ jobs:
 
           # Fail the workflow if no JUnit XML was found.
           # Default: true
-          fail-on-empty: true
+          fail-on-empty: false
       - name: Add mypy annotator
         uses: pr-annotators/mypy-pr-annotator@v1.0.0
 

From 13095b2343d5de9509e2abeb90e7832648775745 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Mon, 24 Jun 2024 17:13:54 +0200
Subject: [PATCH 07/29] Attempt to move .bat post hook to see if this fixes
 generation.

---
 hooks/post_gen_project.bat => post_gen_project.bat | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
 rename hooks/post_gen_project.bat => post_gen_project.bat (100%)

diff --git a/hooks/post_gen_project.bat b/post_gen_project.bat
similarity index 100%
rename from hooks/post_gen_project.bat
rename to post_gen_project.bat

From cb7672f9be381b4a0a2ef8e3cee9fe0af09f680d Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 09:45:11 +0200
Subject: [PATCH 08/29] Remove spotty git-versioning config parameters.

---
 {{cookiecutter.repo_name}}/pyproject.toml | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/pyproject.toml b/{{cookiecutter.repo_name}}/pyproject.toml
index ab2d272..4057b78 100644
--- a/{{cookiecutter.repo_name}}/pyproject.toml
+++ b/{{cookiecutter.repo_name}}/pyproject.toml
@@ -57,10 +57,6 @@ requires = [
 
 [tool.setuptools-git-versioning]
 enabled = true
-version_file = "VERSION"
-count_commits_from_version_file = true
-dev_template = "{tag}.dev{ccount}"
-dirty_template = "{tag}.dev{ccount}"
 
 [tool.pytest.ini_options]
 addopts = "--cov={{cookiecutter.python_import_name}} --cov-report html --cov-report term-missing --cov-fail-under 80"

From e3ee2c601f370fcec7674c217443ffd49db71ae6 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:00:55 +0200
Subject: [PATCH 09/29] Overwrite default python version with current version
 in github CI matrix prior to cookiecutter test.

---
 .github/workflows/run_template_checks.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 34f43f8..e877808 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -22,6 +22,7 @@ jobs:
       - name: Run cookiecutter
         run: |
           pip install cookiecutter
+          sed -i 's/"python_version": "3\.[0-9]*"/"python_version": "${{ matrix.python-version }}"/gi' cookiecutter.json
           cookiecutter --no-input $GITHUB_SERVER_URL/$GITHUB_REPOSITORY -c $GITHUB_SHA
           cd design_toolkit_application
 

From fb59336eeb87ca9ddb2f3c294d8defabf15e1015 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:04:01 +0200
Subject: [PATCH 10/29] Some debug stuff.

---
 .github/workflows/run_template_checks.yml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index e877808..f191fac 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -23,6 +23,8 @@ jobs:
         run: |
           pip install cookiecutter
           sed -i 's/"python_version": "3\.[0-9]*"/"python_version": "${{ matrix.python-version }}"/gi' cookiecutter.json
+          ls -alh
+          cat cookiecutter.json
           cookiecutter --no-input $GITHUB_SERVER_URL/$GITHUB_REPOSITORY -c $GITHUB_SHA
           cd design_toolkit_application
 

From ebfe2e32708b075d6b95545452e56fa1bf64cfff Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:26:52 +0200
Subject: [PATCH 11/29] Use checked out cookiecutter instead of cloning it from
 remote.

---
 .github/workflows/run_template_checks.yml | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index f191fac..e83837d 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -23,9 +23,7 @@ jobs:
         run: |
           pip install cookiecutter
           sed -i 's/"python_version": "3\.[0-9]*"/"python_version": "${{ matrix.python-version }}"/gi' cookiecutter.json
-          ls -alh
-          cat cookiecutter.json
-          cookiecutter --no-input $GITHUB_SERVER_URL/$GITHUB_REPOSITORY -c $GITHUB_SHA
+          cookiecutter --no-input ./
           cd design_toolkit_application
 
       - name: flake8 Lint

From be160b0bebcb7d2ff149ce1e797f477519d652e9 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:29:24 +0200
Subject: [PATCH 12/29] Add some debug stuff.

---
 .github/workflows/run_template_checks.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index e83837d..fe1281a 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -24,6 +24,7 @@ jobs:
           pip install cookiecutter
           sed -i 's/"python_version": "3\.[0-9]*"/"python_version": "${{ matrix.python-version }}"/gi' cookiecutter.json
           cookiecutter --no-input ./
+          ls -alh
           cd design_toolkit_application
 
       - name: flake8 Lint

From 43b448580c33cf954f8ab208c21623feec95c5be Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:31:13 +0200
Subject: [PATCH 13/29] Fix dir name of cookiecutter template output.

---
 .github/workflows/run_template_checks.yml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index fe1281a..665b764 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -24,8 +24,7 @@ jobs:
           pip install cookiecutter
           sed -i 's/"python_version": "3\.[0-9]*"/"python_version": "${{ matrix.python-version }}"/gi' cookiecutter.json
           cookiecutter --no-input ./
-          ls -alh
-          cd design_toolkit_application
+          cd design-toolkit-application
 
       - name: flake8 Lint
         uses: TrueBrain/actions-flake8@v2

From 1ead2068e5b5989bd6383178d36f6bf7ccf96bf6 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:46:29 +0200
Subject: [PATCH 14/29] Update template ci.yml with newest version.

---
 .../.github/workflows/ci.yml                  | 170 +++++++++++-------
 1 file changed, 101 insertions(+), 69 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/.github/workflows/ci.yml b/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
index c5c16aa..b31de2b 100644
--- a/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
+++ b/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
@@ -3,110 +3,142 @@ name: Build-Test-Lint-etc (linux)
 on: [push]
 
 jobs:
-
-  flake8-lint:
+  setup:
     runs-on: ubuntu-latest
-    name: Lint
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["{{cookiecutter.python_version}}"]
+    name: Setup
     steps:
-      - name: Check out source repository
-        uses: actions/checkout@v3
-        with:
-          fetch-depth: 0
-      - name: Set up Python environment
+      # {% raw %}
+      - uses: actions/checkout@v3
+      - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
         with:
-          python-version: {{cookiecutter.python_version}}
-      - name: flake8 Lint
-        uses: TrueBrain/actions-flake8@v2
+          python-version: ${{ matrix.python-version }}
+          cache: 'pip'
+      - run: |
+          ./ci/linux/create_venv.sh
+          ./ci/linux/install_dependencies.sh
+      - name: 'Tar venv'
+        run: tar -cvf venv.tar ./.venv/
+      - name: Save venv
+        uses: actions/upload-artifact@v4
         with:
-          plugins: Flake8-pyproject==1.2.3 flake8-docstrings==1.7.0 flake8-quotes==3.3.2 flake8-bugbear==23.9.16 flake8-mock==0.4 flake8-tuple==0.4.1
-          # only_warn: 1  #causes action to always be succesful, but still provide annotations
+          path: ./venv.tar
+          name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
+      # {% endraw %}
 
-  test:
+  lint:
+    name: Lint
     runs-on: ubuntu-latest
+    needs: [ setup ]
     strategy:
+      fail-fast: false
       matrix:
         python-version: ["{{cookiecutter.python_version}}"]
-#        python-version: [3.8, 3.9, 3.10, 3.11]
     steps:
-    - uses: actions/checkout@v3
-    - name: Set up Python {% raw %}${{ matrix.python-version }}{% endraw %}
-      uses: actions/setup-python@v4
-      with:
-        python-version: {% raw %}${{ matrix.python-version }}{% endraw %}
-        cache: 'pip'
-    - run: |
-        ./ci/linux/create_venv.sh
-        ./ci/linux/install_dependencies.sh
-
-    - name: run unit tests
-      run: |
-        ./ci/linux/test_unit.sh
+      # {% raw %}
+      - uses: actions/checkout@v3
+      - name: Restore venv
+        uses: actions/download-artifact@v4
+        with:
+          name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
+      - name: Untar venv
+        run: tar -xvf venv.tar
+      - name: run unit tests
+        run: |
+          ./ci/linux/lint.sh
+      # {% endraw %}
 
-    - name: Surface failing tests
-      if: always()
-      uses: pmeier/pytest-results-action@main
-      with:
-        # A list of JUnit XML files, directories containing the former, and wildcard
-        # patterns to process.
-        # See @actions/glob for supported patterns.
-        path: test-results.xml
+  test:
+    name: Test
+    runs-on: ubuntu-latest
+    needs: [ setup ]
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["{{cookiecutter.python_version}}"]
+    steps:
+      # {% raw %}
+      - uses: actions/checkout@v3
+      - name: Restore venv
+        uses: actions/download-artifact@v4
+        with:
+          name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
+      - name: Untar venv
+        run: tar -xvf venv.tar
+      - name: run unit tests
+        run: |
+          ./ci/linux/test_unit.sh
+      - name: Surface failing tests
+        if: always()
+        uses: pmeier/pytest-results-action@main
+        with:
+          # A list of JUnit XML files, directories containing the former, and wildcard
+          # patterns to process.
+          # See @actions/glob for supported patterns.
+          path: test-results.xml
 
-        # Add a summary of the results at the top of the report
-        # Default: true
-        summary: true
+          # Add a summary of the results at the top of the report
+          # Default: true
+          summary: true
 
-        # Select which results should be included in the report.
-        # Follows the same syntax as
-        # `pytest -r`
-        # Default: fEX
-        display-options: fEX
+          # Select which results should be included in the report.
+          # Follows the same syntax as
+          # `pytest -r`
+          # Default: fEX
+          display-options: fEX
 
-        # Fail the workflow if no JUnit XML was found.
-        # Default: true
-        fail-on-empty: true
+          # Fail the workflow if no JUnit XML was found.
+          # Default: true
+          fail-on-empty: true
+      # {% endraw %}
 
   typecheck:
+    name: Typecheck
     runs-on: ubuntu-latest
+    needs: [ setup ]
     strategy:
+      fail-fast: false
       matrix:
         python-version: ["{{cookiecutter.python_version}}"]
-#        python-version: [3.8, 3.9, 3.10, 3.11]
     steps:
-    - uses: actions/checkout@v3
-    - name: Set up Python {% raw %}${{ matrix.python-version }}{% endraw %}
-      uses: actions/setup-python@v4
-      with:
-        python-version: {% raw %}${{ matrix.python-version }}{% endraw %}
-        cache: 'pip'
-    - run: |
-        ./ci/linux/create_venv.sh
-        ./ci/linux/install_dependencies.sh
-
-    - name: Add mypy annotator
-      uses: pr-annotators/mypy-pr-annotator@v1.0.0
-
-    - name: run typechecker
-      run: |
-        ./ci/linux/typecheck.sh
+      # {% raw %}
+      - uses: actions/checkout@v3
+      - name: Restore venv
+        uses: actions/download-artifact@v4
+        with:
+          name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
+      - name: Untar venv
+        run: tar -xvf venv.tar
+      - name: Add mypy annotator
+        uses: pr-annotators/mypy-pr-annotator@v1.0.0
+      - name: run typechecker
+        run: |
+          ./ci/linux/typecheck.sh
+      # {% endraw %}
 
   build:
     name: Build the python package
     runs-on: ubuntu-latest
+    needs: [ setup ]
     strategy:
+      fail-fast: false
       matrix:
         python-version: [ "{{cookiecutter.python_version}}" ]
     steps:
+      # {% raw %}
       - uses: actions/checkout@v3
-      - name: Set up Python {% raw %}${{ matrix.python-version }}{% endraw %}
-        uses: actions/setup-python@v4
+      - name: Restore venv
+        uses: actions/download-artifact@v4
         with:
-          python-version: {% raw %}${{ matrix.python-version }}{% endraw %}
-          cache: 'pip'
+          name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
       - run: |
           ./ci/linux/create_venv.sh
           ./ci/linux/install_dependencies.sh
-
       - name: build
         run: |
           ./ci/linux/build_python_package.sh
+      # {% endraw %}

From 208757ed680d31290ce8f1ae1c722eeac21dccae Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:51:02 +0200
Subject: [PATCH 15/29] Update ci.yaml.

---
 .github/workflows/run_template_checks.yml           | 12 ++++++------
 {{cookiecutter.repo_name}}/.github/workflows/ci.yml | 13 ++++++-------
 2 files changed, 12 insertions(+), 13 deletions(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 665b764..ca209ca 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -26,10 +26,10 @@ jobs:
           cookiecutter --no-input ./
           cd design-toolkit-application
 
-      - name: flake8 Lint
-        uses: TrueBrain/actions-flake8@v2
-        with:
-          plugins: Flake8-pyproject==1.2.3 flake8-docstrings==1.7.0 flake8-quotes==3.3.2 flake8-bugbear==23.9.16 flake8-mock==0.4 flake8-tuple==0.4.1
+      - name: Run lint
+        run: |
+          ls -alh
+          ./ci/linux/lint.sh
     
       - name: Run unit tests
         run: |
@@ -42,7 +42,7 @@ jobs:
           # A list of JUnit XML files, directories containing the former, and wildcard
           # patterns to process.
           # See @actions/glob for supported patterns.
-          path: test-results.xml
+          path: ./design-toolkit-application/test-results.xml
 
           # Add a summary of the results at the top of the report
           # Default: true
@@ -60,6 +60,6 @@ jobs:
       - name: Add mypy annotator
         uses: pr-annotators/mypy-pr-annotator@v1.0.0
 
-      - name: run typechecker
+      - name: Run typechecker
         run: |
           ./ci/linux/typecheck.sh
diff --git a/{{cookiecutter.repo_name}}/.github/workflows/ci.yml b/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
index b31de2b..afa63cf 100644
--- a/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
+++ b/{{cookiecutter.repo_name}}/.github/workflows/ci.yml
@@ -47,7 +47,7 @@ jobs:
           name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
       - name: Untar venv
         run: tar -xvf venv.tar
-      - name: run unit tests
+      - name: Run lint
         run: |
           ./ci/linux/lint.sh
       # {% endraw %}
@@ -69,7 +69,7 @@ jobs:
           name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
       - name: Untar venv
         run: tar -xvf venv.tar
-      - name: run unit tests
+      - name: Run unit tests
         run: |
           ./ci/linux/test_unit.sh
       - name: Surface failing tests
@@ -115,7 +115,7 @@ jobs:
         run: tar -xvf venv.tar
       - name: Add mypy annotator
         uses: pr-annotators/mypy-pr-annotator@v1.0.0
-      - name: run typechecker
+      - name: Run typechecker
         run: |
           ./ci/linux/typecheck.sh
       # {% endraw %}
@@ -135,10 +135,9 @@ jobs:
         uses: actions/download-artifact@v4
         with:
           name: ${{ runner.os }}-python-${{ matrix.python-version }}-venv-${{github.run_id}}
-      - run: |
-          ./ci/linux/create_venv.sh
-          ./ci/linux/install_dependencies.sh
-      - name: build
+      - name: Untar venv
+        run: tar -xvf venv.tar
+      - name: Build
         run: |
           ./ci/linux/build_python_package.sh
       # {% endraw %}

From 252fe810cd6bdc8a4e01c34722f3f99eb7834bb3 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:52:33 +0200
Subject: [PATCH 16/29] cd to cookiecutter template output when running
 commands on cookiecutter template output in run_template_checks.yml

---
 .github/workflows/run_template_checks.yml | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index ca209ca..7ce06e2 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -28,11 +28,12 @@ jobs:
 
       - name: Run lint
         run: |
-          ls -alh
+          cd design-toolkit-application
           ./ci/linux/lint.sh
     
       - name: Run unit tests
         run: |
+          cd design-toolkit-application
           ./ci/linux/test_unit.sh
 
       - name: Surface failing tests
@@ -62,4 +63,5 @@ jobs:
 
       - name: Run typechecker
         run: |
+          cd design-toolkit-application
           ./ci/linux/typecheck.sh

From 00be244dcab3a1935fbceb3ac6c1c505abbcf512 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 10:53:49 +0200
Subject: [PATCH 17/29] Fix lint errors by adding newlines to init and main
 files.

---
 .../src/{{cookiecutter.python_import_name}}/__init__.py         | 2 +-
 .../src/{{cookiecutter.python_import_name}}/__main__.py         | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__init__.py b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__init__.py
index ad3c9ef..c608357 100644
--- a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__init__.py
+++ b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__init__.py
@@ -14,4 +14,4 @@
 #  along with this program.  If not, see <https://www.gnu.org/licenses/>.
 
 """__init__.py file containing the defaults."""
-from {{cookiecutter.python_import_name}}.{{cookiecutter.python_import_name}} import start_app
\ No newline at end of file
+from {{cookiecutter.python_import_name}}.{{cookiecutter.python_import_name}} import start_app
diff --git a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__main__.py b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__main__.py
index 78c723b..7a5af6f 100644
--- a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__main__.py
+++ b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/__main__.py
@@ -16,4 +16,4 @@
 """__main__.py file for testing/running application."""
 from {{cookiecutter.python_import_name}} import start_app
 
-start_app(loglevel="DEBUG", colors=True)
\ No newline at end of file
+start_app(loglevel="DEBUG", colors=True)

From cb7300d52965f3c8893914c8f60f2bf7bea42f1f Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 11:01:34 +0200
Subject: [PATCH 18/29] Fix unit tests of template.

---
 {{cookiecutter.repo_name}}/unit_test/test_main.py | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/unit_test/test_main.py b/{{cookiecutter.repo_name}}/unit_test/test_main.py
index ad3a16a..5ccf867 100644
--- a/{{cookiecutter.repo_name}}/unit_test/test_main.py
+++ b/{{cookiecutter.repo_name}}/unit_test/test_main.py
@@ -33,7 +33,7 @@ def test__testable_function__is_correct(self) -> None:
         current_time = datetime(1970, 1, 1, 13, 00)
 
         # Act
-        result = simulator_worker.testable_function(current_time)
+        result = {{cookiecutter.python_import_name}}.testable_function(current_time)
 
         # Assert
         expected_result = datetime(1970, 1, 1, 14, 00)
@@ -41,16 +41,16 @@ def test__testable_function__is_correct(self) -> None:
 
     def test_start_app_info(self) -> None:
         try:
-            simulator_worker.start_app(loglevel="INFO", colors=True)
+            {{cookiecutter.python_import_name}}.start_app(loglevel="INFO", colors=True)
         except Exception as e:
-            self.fail(f"simulator_worker.start_app() raised an exception: {e}")
+            self.fail(f"{{cookiecutter.python_import_name}}.start_app() raised an exception: {e}")
 
     def test_start_app_debug(self) -> None:
         try:
-            simulator_worker.start_app(loglevel="DEBUG", colors=False)
+            {{cookiecutter.python_import_name}}.start_app(loglevel="DEBUG", colors=False)
         except Exception as e:
-            self.fail(f"simulator_worker.start_app() raised an exception: {e}")
+            self.fail(f"{{cookiecutter.python_import_name}}.start_app() raised an exception: {e}")
 
     def test_start_app_wrong_logtype(self) -> None:
         with self.assertRaises(ValueError):
-            simulator_worker.start_app(loglevel="WRONG_LOG_TYPE", colors=False)
+            {{cookiecutter.python_import_name}}.start_app(loglevel="WRONG_LOG_TYPE", colors=False)

From 6c84fc4d6e727ba72e6b66a09ce744cfcc1e88ac Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 11:03:33 +0200
Subject: [PATCH 19/29] Make type hinting in cookiecutter template python3.8
 compatible.

---
 .../src/{{cookiecutter.python_import_name}}/app_logging.py      | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
index 828a276..b9ea810 100644
--- a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
+++ b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
@@ -61,7 +61,7 @@ def parse(value: str) -> "LogLevel":
         return result
 
 
-LOG_LEVEL: LogLevel | None = None
+LOG_LEVEL: Optional[LogLevel] = None
 
 
 def setup_logging(log_level: LogLevel, colors: bool = True) -> None:

From f7c07618e00127ab9f89919d549f94bb21dfc069 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 11:05:02 +0200
Subject: [PATCH 20/29] Add missing import for optional.

---
 .../src/{{cookiecutter.python_import_name}}/app_logging.py     | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
index b9ea810..e4d9df9 100644
--- a/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
+++ b/{{cookiecutter.repo_name}}/src/{{cookiecutter.python_import_name}}/app_logging.py
@@ -15,9 +15,10 @@
 
 """Setup logging for this python application."""
 
+from enum import Enum
 import logging
+from typing import Optional
 import sys
-from enum import Enum
 
 import coloredlogs
 

From c742407c9d41240d98c825c23a1317f277b73a18 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 25 Jun 2024 11:07:29 +0200
Subject: [PATCH 21/29] Fail unit tests if empty.

---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 7ce06e2..ec3531f 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -57,7 +57,7 @@ jobs:
 
           # Fail the workflow if no JUnit XML was found.
           # Default: true
-          fail-on-empty: false
+          fail-on-empty: true
       - name: Add mypy annotator
         uses: pr-annotators/mypy-pr-annotator@v1.0.0
 

From a29f3e9d692fd496078aa3a04655c3e97550925a Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 11:50:58 +0100
Subject: [PATCH 22/29] Use github username when deploying container image to
 GHCR instead of dockerhub username.

---
 cookiecutter.json                                           | 2 +-
 .../.github/workflows/publish_container_image.yml           | 6 +++---
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/cookiecutter.json b/cookiecutter.json
index 72d13ee..371d68d 100644
--- a/cookiecutter.json
+++ b/cookiecutter.json
@@ -6,7 +6,7 @@
   "python_import_name": "{{ cookiecutter.repo_name|replace('-', '') }}",
   "project_short_description": "A description on what this application within the Design Toolkit entails.",
   "publish_container": true,
-  "docker_username": "audrey",
+  "github_username": "project-omotes",
   "container_name": "design-toolkit-application",
   "python_version": "3.11",
   "_copy_without_render": [
diff --git a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
index 76a6d95..ef75b52 100644
--- a/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
+++ b/{{cookiecutter.repo_name}}/.github/workflows/publish_container_image.yml
@@ -23,9 +23,9 @@ jobs:
 {% endraw %}
    - name: Build the container image
      run: |
-      docker build . --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest --tag ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
-      docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:latest
-      docker push ghcr.io/{{ cookiecutter.docker_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
+      docker build . --tag ghcr.io/{{ cookiecutter.github_username }}/{{ cookiecutter.container_name }}:latest --tag ghcr.io/{{ cookiecutter.github_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
+      docker push ghcr.io/{{ cookiecutter.github_username }}/{{ cookiecutter.container_name }}:latest
+      docker push ghcr.io/{{ cookiecutter.github_username }}/{{ cookiecutter.container_name }}:{% raw %}${{github.ref_name}}{% endraw %}
 {%- else -%}
 
 {% endif %}

From bb15e374d29f44213a92cb49a127913bd8c5c5f7 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:05:55 +0100
Subject: [PATCH 23/29] Add in improvements from other repos.

---
 .../ci/linux/_load_dot_env.sh                 |  5 +++
 .../ci/linux/build_python_package.sh          |  6 +++-
 .../ci/linux/install_dependencies.sh          |  6 +++-
 {{cookiecutter.repo_name}}/ci/linux/lint.sh   |  8 +++--
 .../ci/linux/test_unit.sh                     |  6 +++-
 .../ci/linux/typecheck.sh                     |  6 +++-
 .../ci/linux/update_dependencies.sh           |  8 +++--
 {{cookiecutter.repo_name}}/pyproject.toml     | 34 +++++++++++--------
 8 files changed, 56 insertions(+), 23 deletions(-)
 create mode 100644 {{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh

diff --git a/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh b/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh
new file mode 100644
index 0000000..449595f
--- /dev/null
+++ b/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh
@@ -0,0 +1,5 @@
+#!/bin/bash
+
+set -a
+source $1
+set +a
diff --git a/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh b/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
index 5f4244f..0fb4d6c 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
@@ -1,4 +1,8 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
 python -m build
diff --git a/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh b/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
index 0447bed..f5afa3c 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
@@ -1,4 +1,8 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
 pip-sync ./dev-requirements.txt ./requirements.txt
diff --git a/{{cookiecutter.repo_name}}/ci/linux/lint.sh b/{{cookiecutter.repo_name}}/ci/linux/lint.sh
index e5cd8ee..4ea291c 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/lint.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/lint.sh
@@ -1,4 +1,8 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
-flake8 ./src/{{cookiecutter.python_import_name}}
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
+flake8 ./src/{{cookiecutter.python_import_name}} ./unit_test/
diff --git a/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh b/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
index b810a25..a0d9496 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
@@ -1,4 +1,8 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
 PYTHONPATH='$PYTHONPATH:src/' pytest --junit-xml=test-results.xml unit_test/
diff --git a/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh b/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
index 5dfedef..01ff1a1 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
@@ -1,4 +1,8 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
 python -m mypy ./src/{{cookiecutter.python_import_name}} ./unit_test/
diff --git a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
index cfb00aa..ea77045 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
@@ -1,5 +1,9 @@
 #!/usr/bin/env sh
 
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
+
 pip-compile --output-file=requirements.txt pyproject.toml
-pip-compile --extra=dev --output-file=dev-requirements.txt -c requirements.txt pyproject.toml
+pip-compile --extra=dev -c requirements.txt --output-file=dev-requirements.txt pyproject.toml
diff --git a/{{cookiecutter.repo_name}}/pyproject.toml b/{{cookiecutter.repo_name}}/pyproject.toml
index bcf6b30..5d7f4ab 100644
--- a/{{cookiecutter.repo_name}}/pyproject.toml
+++ b/{{cookiecutter.repo_name}}/pyproject.toml
@@ -23,18 +23,19 @@ dependencies = ["coloredlogs~=15.0.1"]
 
 [project.optional-dependencies]
 dev = [
-    "setuptools ~= 69.0.3",
-    "wheel ~= 0.40.0",
+    "setuptools ~= 75.6.0",
+    "wheel ~= 0.45.1",
     "setuptools-git-versioning < 2",
-    "black~=22.1.0",
-    "flake8==6.0.0",
-    "Flake8-pyproject==1.2.3",
-    "pytest ~=7.3.1",
-    "pytest-cov ~=4.0.0",
-    "bump2version==1.0.1",
-    "mypy ~= 1.5.1",
-    "isort==5.13.2",
-    "build ~= 1.0.3",
+    "black ~= 24.10.0",
+    "flake8 == 7.1.1",
+    "Flake8-pyproject == 1.2.3",
+    "flake8-docstrings ~= 1.7.0",
+    "flake8-quotes ~= 3.4.0",
+    "pytest ~= 8.3.4",
+    "pytest-cov ~= 6.0.0",
+    "mypy ~= 1.13.0",
+    "isort == 5.13.2",
+    "build ~= 1.2.2",
 ]
 
 [project.urls]
@@ -49,13 +50,14 @@ changelog = "https://github.com/Nieuwe-Warmte-Nu/{{cookiecutter.repo_name}}/blob
 [build-system]
 build-backend = "setuptools.build_meta"
 requires = [
-    "setuptools ~= 69.0.3",
-    "wheel ~= 0.40.0",
-    "setuptools-git-versioning<2",
+    "setuptools ~= 75.6.0",
+    "wheel ~= 0.45.1",
+    "setuptools-git-versioning < 2",
 ]
 
 [tool.setuptools-git-versioning]
 enabled = true
+starting_version = "0.0.1"
 
 [tool.pytest.ini_options]
 addopts = "--cov={{cookiecutter.python_import_name}} --cov-report html --cov-report term-missing --cov-fail-under 80"
@@ -72,8 +74,10 @@ ignore = [
     'E203', # Space before colon (not PEP-8 compliant, and conflicts with black)
     'C408', # Suggestion to use dict() over {}
     'W503', # Starting lines with operators.
+    'D104', # Missing docstring in public package
+    'D100'  # Missing docstring in public module
 ]
-per-file-ignores = ['__init__.py:F401', 'test_main.py:D100,D101,D102,D103']
+per-file-ignores = ['__init__.py:F401', 'test_*.py:D100,D101,D102,D103']
 max-line-length = 100
 count = true
 

From 72ef07f82c6b98346ab2c522e5a4eabc6d767565 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:23:17 +0100
Subject: [PATCH 24/29] More improvements from other repos

---
 {{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh  | 4 ++--
 {{cookiecutter.repo_name}}/ci/win32/update_dependencies.cmd | 4 ++--
 {{cookiecutter.repo_name}}/pyproject.toml                   | 5 ++++-
 3 files changed, 8 insertions(+), 5 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
index ea77045..26ffec3 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
@@ -5,5 +5,5 @@ if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   . .venv/bin/activate
 fi
 
-pip-compile --output-file=requirements.txt pyproject.toml
-pip-compile --extra=dev -c requirements.txt --output-file=dev-requirements.txt pyproject.toml
+pip-compile --upgrade --output-file=requirements.txt pyproject.toml
+pip-compile --upgrade --extra=dev -c requirements.txt --output-file=dev-requirements.txt pyproject.toml
diff --git a/{{cookiecutter.repo_name}}/ci/win32/update_dependencies.cmd b/{{cookiecutter.repo_name}}/ci/win32/update_dependencies.cmd
index 061ee6d..f0f55a2 100644
--- a/{{cookiecutter.repo_name}}/ci/win32/update_dependencies.cmd
+++ b/{{cookiecutter.repo_name}}/ci/win32/update_dependencies.cmd
@@ -1,6 +1,6 @@
 
 pushd .
 cd /D "%~dp0"
-pip-compile --output-file=..\..\requirements.txt ..\..\pyproject.toml
-pip-compile --extra=dev --output-file=..\..\dev-requirements.txt -c ..\..\requirements.txt  ..\..\pyproject.toml
+pip-compile --upgrade --output-file=..\..\requirements.txt ..\..\pyproject.toml
+pip-compile --upgrade --extra=dev --output-file=..\..\dev-requirements.txt -c ..\..\requirements.txt  ..\..\pyproject.toml
 popd
\ No newline at end of file
diff --git a/{{cookiecutter.repo_name}}/pyproject.toml b/{{cookiecutter.repo_name}}/pyproject.toml
index 5d7f4ab..29c569a 100644
--- a/{{cookiecutter.repo_name}}/pyproject.toml
+++ b/{{cookiecutter.repo_name}}/pyproject.toml
@@ -28,9 +28,12 @@ dev = [
     "setuptools-git-versioning < 2",
     "black ~= 24.10.0",
     "flake8 == 7.1.1",
-    "Flake8-pyproject == 1.2.3",
+    "flake8-pyproject ~= 1.2.3",
     "flake8-docstrings ~= 1.7.0",
     "flake8-quotes ~= 3.4.0",
+    "flake8-bugbear ~= 24.10.31",
+    "flake8-mock ~= 0.4",
+    "flake8-tuple ~= 0.4.1",
     "pytest ~= 8.3.4",
     "pytest-cov ~= 6.0.0",
     "mypy ~= 1.13.0",

From 8941d019aeab39c3ac1a21af560a232125f54445 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:37:38 +0100
Subject: [PATCH 25/29] Temp ls on test unit results.

---
 .github/workflows/run_template_checks.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index ec3531f..369d27b 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -35,6 +35,7 @@ jobs:
         run: |
           cd design-toolkit-application
           ./ci/linux/test_unit.sh
+          ls -alh
 
       - name: Surface failing tests
         if: always()

From 511c79ee5965908dd87e5cc5a3f580ac1db28b29 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:40:00 +0100
Subject: [PATCH 26/29] Switch over to bash for ci scripts instead of sh.

---
 .github/workflows/run_template_checks.yml                   | 1 -
 {{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh        | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/build_python_package.sh | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/create_venv.sh          | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/lint.sh                 | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/test_unit.sh            | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/typecheck.sh            | 2 +-
 {{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh  | 2 +-
 9 files changed, 8 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 369d27b..ec3531f 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -35,7 +35,6 @@ jobs:
         run: |
           cd design-toolkit-application
           ./ci/linux/test_unit.sh
-          ls -alh
 
       - name: Surface failing tests
         if: always()
diff --git a/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh b/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh
index 449595f..434c067 100644
--- a/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/_load_dot_env.sh
@@ -1,4 +1,4 @@
-#!/bin/bash
+#!/usr/bin/env bash
 
 set -a
 source $1
diff --git a/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh b/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
index 0fb4d6c..0d2d2af 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/build_python_package.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."
diff --git a/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh b/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
index 4ab293e..36ccca3 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 python{{cookiecutter.python_version}} -m venv ./.venv
 . .venv/bin/activate
diff --git a/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh b/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
index f5afa3c..e00b897 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/install_dependencies.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."
diff --git a/{{cookiecutter.repo_name}}/ci/linux/lint.sh b/{{cookiecutter.repo_name}}/ci/linux/lint.sh
index 4ea291c..776e064 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/lint.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/lint.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."
diff --git a/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh b/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
index a0d9496..bff0c15 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/test_unit.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."
diff --git a/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh b/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
index 01ff1a1..62d476f 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/typecheck.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."
diff --git a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
index 26ffec3..fea6566 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/update_dependencies.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env sh
+#!/usr/bin/env bash
 
 if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
   echo "Activating .venv first."

From 2acadf40826a9d3dfa185c89cdd509278728fd9d Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:49:54 +0100
Subject: [PATCH 27/29] Drop python 3.8 in favor of 3.9 and turn off fail fast
 on github actions.

---
 .github/workflows/run_template_checks.yml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index ec3531f..67d3b40 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -7,7 +7,8 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ['3.8', '3.10', '3.11']
+        fail-fast: false
+        python-version: ['3.9', '3.10', '3.11']
 
     name: Test cookiecutter template
     steps:

From 8c551f2492ad8bea86a4b32518b57d41eee51447 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Tue, 10 Dec 2024 15:51:02 +0100
Subject: [PATCH 28/29] Fix fail fast location.

---
 .github/workflows/run_template_checks.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/run_template_checks.yml b/.github/workflows/run_template_checks.yml
index 67d3b40..da4e9e6 100644
--- a/.github/workflows/run_template_checks.yml
+++ b/.github/workflows/run_template_checks.yml
@@ -6,8 +6,8 @@ jobs:
   build-lint-test:
     runs-on: ubuntu-latest
     strategy:
+      fail-fast: false
       matrix:
-        fail-fast: false
         python-version: ['3.9', '3.10', '3.11']
 
     name: Test cookiecutter template

From e276fb369ff486485526a04652bdc85e54a45b13 Mon Sep 17 00:00:00 2001
From: Sebastiaan la Fleur <sebastiaan@lfse.nl>
Date: Wed, 11 Dec 2024 11:35:36 +0100
Subject: [PATCH 29/29] Update setuptools-git-versioning, add py.typed to
 package data and only activate venv on linux when creating a venv.

---
 {{cookiecutter.repo_name}}/ci/linux/create_venv.sh | 5 ++++-
 {{cookiecutter.repo_name}}/pyproject.toml          | 7 +++++--
 2 files changed, 9 insertions(+), 3 deletions(-)

diff --git a/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh b/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
index 36ccca3..ca7dda1 100755
--- a/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
+++ b/{{cookiecutter.repo_name}}/ci/linux/create_venv.sh
@@ -1,5 +1,8 @@
 #!/usr/bin/env bash
 
 python{{cookiecutter.python_version}} -m venv ./.venv
-. .venv/bin/activate
+if [[ "$OSTYPE" != "win32" && "$OSTYPE" != "msys" ]]; then
+  echo "Activating .venv first."
+  . .venv/bin/activate
+fi
 pip3 install pip-tools
diff --git a/{{cookiecutter.repo_name}}/pyproject.toml b/{{cookiecutter.repo_name}}/pyproject.toml
index 29c569a..b08852c 100644
--- a/{{cookiecutter.repo_name}}/pyproject.toml
+++ b/{{cookiecutter.repo_name}}/pyproject.toml
@@ -25,7 +25,7 @@ dependencies = ["coloredlogs~=15.0.1"]
 dev = [
     "setuptools ~= 75.6.0",
     "wheel ~= 0.45.1",
-    "setuptools-git-versioning < 2",
+    "setuptools-git-versioning >= 2.0, < 3",
     "black ~= 24.10.0",
     "flake8 == 7.1.1",
     "flake8-pyproject ~= 1.2.3",
@@ -55,9 +55,12 @@ build-backend = "setuptools.build_meta"
 requires = [
     "setuptools ~= 75.6.0",
     "wheel ~= 0.45.1",
-    "setuptools-git-versioning < 2",
+    "setuptools-git-versioning >= 2.0, < 3",
 ]
 
+[tool.setuptools.package-data]
+"{{cookiecutter.python_import_name}}" = ["py.typed"]
+
 [tool.setuptools-git-versioning]
 enabled = true
 starting_version = "0.0.1"