diff --git a/README.rst b/README.rst index 84669288a..905932758 100644 --- a/README.rst +++ b/README.rst @@ -57,7 +57,7 @@ For installation instructions, see doc/source/install.rst To cite Neo in publications, see CITATION.txt -:copyright: Copyright 2010-2025 by the Neo team, see doc/source/authors.rst. +:copyright: Copyright 2010-2026 by the Neo team, see doc/source/authors.rst. :license: 3-Clause Revised BSD License, see LICENSE.txt for details. Funding diff --git a/codemeta.json b/codemeta.json index 58b5eed21..53790edb8 100644 --- a/codemeta.json +++ b/codemeta.json @@ -4,15 +4,15 @@ "license": "https://spdx.org/licenses/BSD-3-Clause", "codeRepository": "https://github.com/NeuralEnsemble/python-neo", "contIntegration": "https://github.com/NeuralEnsemble/python-neo/actions", - "dateModified": "2025-10-13", - "downloadUrl": "https://files.pythonhosted.org/packages/12/74/2906034ce92f7fb76dac5f095dcbb2b061f55b1f6eda53fc45335c1689e2/neo-0.14.3.tar.gz", + "dateModified": "2026-01-01", + "downloadUrl": "", "issueTracker": "https://github.com/NeuralEnsemble/python-neo/issues", "name": "Neo", - "version": "0.14.3", + "version": "0.14.4", "identifier": "RRID:SCR_000634", "description": "Neo is a Python package for working with electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats, including Spike2, NeuroExplorer, AlphaOmega, Axon, Blackrock, Plexon, Tdt, and support for writing to a subset of these formats plus non-proprietary formats including HDF5.\n\nThe goal of Neo is to improve interoperability between Python tools for analyzing, visualizing and generating electrophysiology data by providing a common, shared object model. In order to be as lightweight a dependency as possible, Neo is deliberately limited to represention of data, with no functions for data analysis or visualization.\n\nNeo is used by a number of other software tools, including SpykeViewer (data analysis and visualization), Elephant (data analysis), the G-node suite (databasing), PyNN (simulations), tridesclous_ (spike sorting) and ephyviewer (data visualization).\n\nNeo implements a hierarchical data model well adapted to intracellular and extracellular electrophysiology and EEG data with support for multi-electrodes (for example tetrodes). Neo's data objects build on the quantities package, which in turn builds on NumPy by adding support for physical dimensions. Thus Neo objects behave just like normal NumPy arrays, but with additional metadata, checks for dimensional consistency and automatic unit conversion.", "applicationCategory": "neuroscience", - "releaseNotes": "https://neo.readthedocs.io/en/latest/releases/0.14.3.html", + "releaseNotes": "https://neo.readthedocs.io/en/latest/releases/0.14.4.html", "funding": "https://cordis.europa.eu/project/id/945539", "developmentStatus": "active", "referencePublication": "https://doi.org/10.3389/fninf.2014.00010", @@ -121,6 +121,7 @@ {"@type": "Person", "givenName": "Paul", "familyName": "Adkisson"}, {"@type": "Person", "givenName": "Akshaj", "familyName": "Verma"}, {"@type": "Person", "givenName": "Letizia", "familyName": "Signorelli"}, - {"@type": "Person", "givenName": "Daniel", "familyName": "Parthier"} + {"@type": "Person", "givenName": "Daniel", "familyName": "Parthier"}, + {@ADDkkuntal} ] } diff --git a/doc/source/authors.rst b/doc/source/authors.rst index 079786f41..9c5518077 100644 --- a/doc/source/authors.rst +++ b/doc/source/authors.rst @@ -98,6 +98,7 @@ and may not be the current affiliation of a contributor. * Akshaj Verma [46] * Letizia Signorelli [47] * Daniel Parthier [48] +* ADD @Kkuntal990*** 1. Centre de Recherche en Neuroscience de Lyon, CNRS UMR5292 - INSERM U1028 - Université Claude Bernard Lyon 1 2. Unité de Neuroscience, Information et Complexité, CNRS UPR 3293, Gif-sur-Yvette, France diff --git a/doc/source/conf.py b/doc/source/conf.py index 1b598de51..8d0142fbd 100644 --- a/doc/source/conf.py +++ b/doc/source/conf.py @@ -60,7 +60,7 @@ # General information about the project. project = "Neo" -copyright = "2010-2025, " + AUTHORS +copyright = "2010-2026, " + AUTHORS # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the diff --git a/doc/source/releases.rst b/doc/source/releases.rst index 0f952ed77..a9df0c50a 100644 --- a/doc/source/releases.rst +++ b/doc/source/releases.rst @@ -6,6 +6,7 @@ Release notes .. toctree:: :maxdepth: 1 + releases/0.14.4.rst releases/0.14.3.rst releases/0.14.2.rst releases/0.14.1.rst diff --git a/doc/source/releases/0.14.4.rst b/doc/source/releases/0.14.4.rst new file mode 100644 index 000000000..89e093760 --- /dev/null +++ b/doc/source/releases/0.14.4.rst @@ -0,0 +1,43 @@ +======================== +Neo 0.14.4 release notes +======================== + +xx January 25 + +This release of Neo includes many bug fixes in various IOs with an eye to a 1.0 release. + +See all `pull requests`_ included in this release and the `list of closed issues`_. + + +Dependency Changes +------------------ +Per our policy of NEP29 + 1 year, we have dropped support for NumPy < 1.25. + + +Testing +------- +We are now testing against Python 3.14 for core tests with all possible combinations of NumPy and Python that we support. IO tests were updated to test against Python 3.9 (oldest supported) and Python 3.14 (newest supported) Python versions. + + +:code:`BaseRawIO` Change +------------------------ +The signal stream dtype name was lengthened from :code:`U64` to a :code:`U128` to deal with long file paths being incorporated into +file names. See `file name issue`_ on SpikeInterface repo for an example of the truncation which required this fix. + + +Bug fixes and improvements in IO modules +---------------------------------------- + +Bug fixes and/or improvements have been made to :code:`AxonIO`, :code:`BrainVisionIO`, :code:`SpikeGLXIO`. + + +Acknowledgements +---------------- + +Thanks to Andrew Davison, Zach McKenzie, @Kkuntal990, Heberto Mayorquin, Samuel Garcia, Alessio Buccino, and Chris Halcrow + +.. _`pull requests` : https://github.com/NeuralEnsemble/python-neo/pulls?q=is%3Apr+is%3Aclosed+milestone%3A0.14.4 + +.. _`list of closed issues` : https://github.com/NeuralEnsemble/python-neo/issues?q=is%3Aissue%20state%3Aclosed%20milestone%3A0.14.4 + +.. _`file name issue` : https://github.com/SpikeInterface/spikeinterface/issues/4185 \ No newline at end of file diff --git a/pyproject.toml b/pyproject.toml index f0a6f676f..133280d57 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [project] name = "neo" -version = "0.15.0.dev0" +version = "0.14.4" authors = [{name = "Neo authors and contributors"}] description = "Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats" readme = "README.rst"