Update check-standard.yaml

update to match r4ds to see if resolves error

Author: dsass1

.github/workflows/check-standard.yaml

@@ -29,18 +29,50 @@ jobs:
       R_KEEP_PKG_SOURCE: yes
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-pandoc@v2
 
+      # Need because of ggalt package, perhaps because it is dependence on 
+      # the proj4 package. libgdal is needed for terra. openssl for arrow.
+      
+      - name: Install system dependencies (Linux)
+        if: runner.os == 'Linux'
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y libproj-dev
+          sudo apt-get install -y libgdal-dev
+
       - uses: r-lib/actions/setup-r@v2
         with:
           r-version: ${{ matrix.config.r }}
           http-user-agent: ${{ matrix.config.http-user-agent }}
           use-public-rspm: true
 
-      - uses: r-lib/actions/setup-r-dependencies@v2
+      # The default value of the cache-version is 1, which just uses what is there. If
+      # you want to rebuild the cache, set this to >1.
+
+      - uses: r-lib/actions/setup-renv@v2
         with:
-          extra-packages: rcmdcheck
+          cache-version: 1
+          
+      # The arrow package generates lots of problems. Perhaps these will go away
+      # once a new version is available on CRAN. In the meantime, the only solution
+      # seems to involve forcing an installation from source. This only really 
+      # seems necessary for the macOS. Not sure why? 
+      
+      - name: Install arrow package from source (macOS)
+        if: runner.os == 'macOS'
+        run: |
+          export ARROW_OPENSSL_CXXFLAGS="-I/usr/local/opt/openssl@3/include"
+          export ARROW_OPENSSL_LDFLAGS="-L/usr/local/opt/openssl@3/lib -lssl -lcrypto"
+          export OPENSSL_ROOT_DIR="/usr/local/opt/openssl@3"
+          Rscript -e 'install.packages("arrow", type = "source", INSTALL_opts = "--no-lock")'
+
+      # Sure seems like check-r-package should take care of this installation, but
+      # it does not seem to do so. Note that you can't just include rcmdcheck in the
+      # DESCRIPTION file without causing failure to local calls to R CMD check.
 
+      - run: Rscript -e 'install.packages("rcmdcheck")'
+      
       - uses: r-lib/actions/check-r-package@v2