From 46ffbfb9555dfced51a504d495f118ae4dbd3cb7 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 27 Dec 2024 11:25:51 -0500 Subject: [PATCH 001/156] Initial commit --- .gitattributes | 2 ++ 1 file changed, 2 insertions(+) create mode 100644 .gitattributes diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 00000000..dfe07704 --- /dev/null +++ b/.gitattributes @@ -0,0 +1,2 @@ +# Auto detect text files and perform LF normalization +* text=auto From 19db60c2f1c646e1678d4083f189b1bde0783c5d Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 27 Dec 2024 11:37:00 -0500 Subject: [PATCH 002/156] Empty module --- .gitignore | 4 ++++ CMakeLists.txt | 54 +++++++++++++++++++++++++++++++++++++++++++ src/CMakeLists.txt | 4 ++++ src/newlinalg.c | 15 ++++++++++++ src/newlinalg.h | 11 +++++++++ test/newlinalg.morpho | 3 +++ 6 files changed, 91 insertions(+) create mode 100644 .gitignore create mode 100644 CMakeLists.txt create mode 100644 src/CMakeLists.txt create mode 100644 src/newlinalg.c create mode 100644 src/newlinalg.h create mode 100644 test/newlinalg.morpho diff --git a/.gitignore b/.gitignore new file mode 100644 index 00000000..e4e9d09e --- /dev/null +++ b/.gitignore @@ -0,0 +1,4 @@ +*.so +*.DS_Store +build/* +build-xcode/* diff --git a/CMakeLists.txt b/CMakeLists.txt new file mode 100644 index 00000000..9d0630fd --- /dev/null +++ b/CMakeLists.txt @@ -0,0 +1,54 @@ +cmake_minimum_required(VERSION 3.13) + +project(morpho-newlinalg) + +# Build the library as a plugin +add_library(newlinalg MODULE "") + +# Suppress 'lib' prefix +set_target_properties(newlinalg PROPERTIES PREFIX "") + +# Add sources +add_subdirectory(src) + +### + +# Locate the morpho.h header file and store in MORPHO_HEADER +find_file(MORPHO_HEADER + morpho.h + HINTS + /usr/local/opt/morpho + /opt/homebrew/opt/morpho + /usr/local/include/morpho + ) + +# Identify folder that morpho.h is located in from MORPHO_HEADER and store in MORPHO_INCLUDE +get_filename_component(MORPHO_INCLUDE ${MORPHO_HEADER} DIRECTORY) + +# Add morpho headers to MORPHO_INCLUDE +target_include_directories(newlinalg PUBLIC ${MORPHO_INCLUDE}) + +# Add general header search paths +target_include_directories(newlinalg PUBLIC /usr/local/include /opt/homebrew/include) + +# Add morpho headers in subfolders to MORPHO_INCLUDE +file(GLOB morpho_subdirectories LIST_DIRECTORIES true ${MORPHO_INCLUDE}/*) +foreach(dir ${morpho_subdirectories}) + IF(IS_DIRECTORY ${dir}) + target_include_directories(zeromq PUBLIC ${dir}) + ELSE() + CONTINUE() + ENDIF() +endforeach() + +# Locate libmorpho +find_library(MORPHO_LIBRARY + NAMES morpho libmorpho +) + +target_link_libraries(newlinalg ${MORPHO_LIBRARY} ${ZMQ_LIBRARY} ${CZMQ_LIBRARY}) + +set(CMAKE_INSTALL_PREFIX ..) + +# Install the resulting binary +install(TARGETS newlinalg LIBRARY DESTINATION lib/) diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt new file mode 100644 index 00000000..3ff084f9 --- /dev/null +++ b/src/CMakeLists.txt @@ -0,0 +1,4 @@ +target_sources(newlinalg + PRIVATE + newlinalg.c newlinalg.h +) \ No newline at end of file diff --git a/src/newlinalg.c b/src/newlinalg.c new file mode 100644 index 00000000..dc7dd41b --- /dev/null +++ b/src/newlinalg.c @@ -0,0 +1,15 @@ +#include +#include +#include + +#include "newlinalg.h" + +/* ------------------------------------------------------- + * Initialization and finalization + * ------------------------------------------------------- */ + +void newlinalg_initialize(void) { +} + +void newlinalg_finalize(void) { +} diff --git a/src/newlinalg.h b/src/newlinalg.h new file mode 100644 index 00000000..18e5b4fb --- /dev/null +++ b/src/newlinalg.h @@ -0,0 +1,11 @@ + +/** @file newlinalg.h + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#ifndef newlinalg_h +#define newlinalg_h + +#endif \ No newline at end of file diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho new file mode 100644 index 00000000..11bf5297 --- /dev/null +++ b/test/newlinalg.morpho @@ -0,0 +1,3 @@ + +import newlinalg + From 901c2c0e136420945a010f37bd26d6b93ab35887 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 28 Dec 2024 10:07:38 -0500 Subject: [PATCH 003/156] Updates to ComplexMatrix --- src/CMakeLists.txt | 2 + src/newlinalg.c | 9 ++-- src/newlinalg.h | 7 ++- src/xcomplexmatrix.c | 7 +++ src/xcomplexmatrix.h | 12 +++++ src/xmatrix.c | 112 ++++++++++++++++++++++++++++++++++++++++++ src/xmatrix.h | 34 +++++++++++++ test/newlinalg.morpho | 5 ++ 8 files changed, 184 insertions(+), 4 deletions(-) create mode 100644 src/xcomplexmatrix.c create mode 100644 src/xcomplexmatrix.h create mode 100644 src/xmatrix.c create mode 100644 src/xmatrix.h diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index 3ff084f9..9fd5edf2 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -1,4 +1,6 @@ target_sources(newlinalg PRIVATE newlinalg.c newlinalg.h + xmatrix.c xmatrix.h + xcomplexmatrix.c xcomplexmatrix.h ) \ No newline at end of file diff --git a/src/newlinalg.c b/src/newlinalg.c index dc7dd41b..d8190686 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -1,6 +1,8 @@ -#include -#include -#include +/** @file newlinalg.c + * @author T J Atherton + * + * @brief New linear algebra library +*/ #include "newlinalg.h" @@ -9,6 +11,7 @@ * ------------------------------------------------------- */ void newlinalg_initialize(void) { + xmatrix_initialize(); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index 18e5b4fb..43a0220a 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -8,4 +8,9 @@ #ifndef newlinalg_h #define newlinalg_h -#endif \ No newline at end of file +#include +#include + +#include "xmatrix.h" + +#endif diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c new file mode 100644 index 00000000..e0d84891 --- /dev/null +++ b/src/xcomplexmatrix.c @@ -0,0 +1,7 @@ +/** @file xcomplexmatrix.c + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#include "xcomplexmatrix.h" diff --git a/src/xcomplexmatrix.h b/src/xcomplexmatrix.h new file mode 100644 index 00000000..7cfb9142 --- /dev/null +++ b/src/xcomplexmatrix.h @@ -0,0 +1,12 @@ +/** @file xcomplexmatrix.h + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#ifndef xcomplexmatrix_h +#define xcomplexmatrix_h + +#include "newlinalg.h" + +#endif diff --git a/src/xmatrix.c b/src/xmatrix.c new file mode 100644 index 00000000..56d5b4e3 --- /dev/null +++ b/src/xmatrix.c @@ -0,0 +1,112 @@ +/** @file xmatrix.c + * @author T J Atherton + * + * @brief New matrices +*/ + +#include "newlinalg.h" +#include "xmatrix.h" + +/* ********************************************************************** + * XMatrix objects + * ********************************************************************** */ + +objecttype objectxmatrixtype; + +/** Matrix object definitions */ +size_t objectxmatrix_sizefn(object *obj) { + return sizeof(objectxmatrix)+sizeof(double) * + ((objectxmatrix *) obj)->nels; +} + +void objectxmatrix_printfn(object *obj, void *v) { + morpho_printf(v, "<" XMATRIX_CLASSNAME ">"); +} + +objecttypedefn objectxmatrixdefn = { + .printfn=objectxmatrix_printfn, + .markfn=NULL, + .freefn=NULL, + .sizefn=objectxmatrix_sizefn, + .hashfn=NULL, + .cmpfn=NULL +}; + +/* ********************************************************************** + * XMatrix utility functions + * ********************************************************************** */ + +objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { + int nels = nrows*ncols; + objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), OBJECT_XMATRIX); + + if (new) { + new->nrows=nrows; + new->ncols=ncols; + new->nels=nels; + new->elements=new->matrixdata; + if (zero) memset(new->elements, 0, nels*sizeof(double)); + } + + return new; +} + +/* ********************************************************************** + * XMatrix constructor + * ********************************************************************** */ + +value xmatrix_constructor(vm *v, int nargs, value *args) { + value out=MORPHO_NIL; + + int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + + objectxmatrix *new=xmatrix_new(nrows, ncols, true); + + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + + return out; +} + +value xmatrix_list_constructor(vm *v, int nargs, value *args) { + + + return MORPHO_NIL; +} + +value xmatrix_invalid_constructor(vm *v, int nargs, value *args) { + morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); + return MORPHO_NIL; +} + +/* ********************************************************************** + * XMatrix veneer class + * ********************************************************************** */ + +value XMatrix_add(vm *v, int nargs, value *args) { + return MORPHO_NIL; +} + +MORPHO_BEGINCLASS(XMatrix) +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add, BUILTIN_FLAGSEMPTY) +MORPHO_ENDCLASS + +/* ********************************************************************** + * Initialization + * ********************************************************************** */ + +void xmatrix_initialize(void) { + objectxmatrixtype=object_addtype(&objectxmatrixdefn); + + value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), MORPHO_NIL); + + object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); + + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_list_constructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_invalid_constructor, MORPHO_FN_CONSTRUCTOR, NULL); +} + diff --git a/src/xmatrix.h b/src/xmatrix.h new file mode 100644 index 00000000..a4a2006f --- /dev/null +++ b/src/xmatrix.h @@ -0,0 +1,34 @@ +/** @file xmatrix.h + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#ifndef xmatrix_h +#define xmatrix_h + +/* ------------------------------------------------------- + * Matrix object type + * ------------------------------------------------------- */ + +extern objecttype objectxmatrixtype; +#define OBJECT_XMATRIX objectxmatrixtype + +typedef struct { + object obj; + int nrows; + int ncols; + int nels; + double *elements; + double matrixdata[]; +} objectxmatrix; + +/* ------------------------------------------------------- + * Matrix veneer class + * ------------------------------------------------------- */ + +#define XMATRIX_CLASSNAME "XMatrix" + +void xmatrix_initialize(void); + +#endif diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho index 11bf5297..58b69eed 100644 --- a/test/newlinalg.morpho +++ b/test/newlinalg.morpho @@ -1,3 +1,8 @@ import newlinalg +var a = XMatrix(2,2) +//var b = XMatrix([1,2,3]) + +print a +//print b From cf37b900444862a51c069f8c78bbf63e44144739 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 30 Nov 2025 20:02:35 -0500 Subject: [PATCH 004/156] Printing, getting and setting implementation --- CMakeLists.txt | 2 +- src/xmatrix.c | 124 +++++++++++++++++++++++++++++++++++++----- src/xmatrix.h | 12 ++++ test/newlinalg.morpho | 12 ++-- 4 files changed, 132 insertions(+), 18 deletions(-) diff --git a/CMakeLists.txt b/CMakeLists.txt index 9d0630fd..e53fa9a2 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -46,7 +46,7 @@ find_library(MORPHO_LIBRARY NAMES morpho libmorpho ) -target_link_libraries(newlinalg ${MORPHO_LIBRARY} ${ZMQ_LIBRARY} ${CZMQ_LIBRARY}) +target_link_libraries(newlinalg ${MORPHO_LIBRARY}) set(CMAKE_INSTALL_PREFIX ..) diff --git a/src/xmatrix.c b/src/xmatrix.c index 56d5b4e3..9ba74122 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -5,7 +5,10 @@ */ #include "newlinalg.h" -#include "xmatrix.h" +#include "xmatrix.h" + +#define MORPHO_INCLUDE_LINALG +#include /* ********************************************************************** * XMatrix objects @@ -36,6 +39,10 @@ objecttypedefn objectxmatrixdefn = { * XMatrix utility functions * ********************************************************************** */ +/* ---------------------- + * Constructors + * ---------------------- */ + objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { int nels = nrows*ncols; objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), OBJECT_XMATRIX); @@ -51,34 +58,65 @@ objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { return new; } +/* ---------------------- + * Accessing elements + * ---------------------- */ + +/** @brief Sets a matrix element. + @returns true if the element is in the range of the matrix, false otherwise */ +bool xmatrix_setelement(objectxmatrix *matrix, unsigned int row, unsigned int col, double value) { + if (!(colncols && rownrows)) return false; + + matrix->elements[col*matrix->nrows+row]=value; + return true; +} + +/** @brief Gets a matrix element + * @returns true if the element is in the range of the matrix, false otherwise */ +bool xmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int col, double *value) { + if (!(colncols && rownrows)) return false; + + if (value) *value=matrix->elements[col*matrix->nrows+row]; + return true; +} + +/* ---------------------- + * Display + * ---------------------- */ + +/** Prints a matrix */ +void xmatrix_print(vm *v, objectxmatrix *m) { + for (int i=0; inrows; i++) { // Rows run from 0...m + morpho_printf(v, "[ "); + for (int j=0; jncols; j++) { // Columns run from 0...k + double val=0.0; + xmatrix_getelement(m, i, j, &val); + morpho_printf(v, "%g ", (fabs(val)nrows-1 ? "\n" : "")); + } +} + + /* ********************************************************************** * XMatrix constructor * ********************************************************************** */ value xmatrix_constructor(vm *v, int nargs, value *args) { - value out=MORPHO_NIL; - int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); objectxmatrix *new=xmatrix_new(nrows, ncols, true); - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } - - return out; + return morpho_wrapandbind(v, (object *) new); } value xmatrix_list_constructor(vm *v, int nargs, value *args) { - - return MORPHO_NIL; } value xmatrix_invalid_constructor(vm *v, int nargs, value *args) { - morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); + //morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; } @@ -86,12 +124,72 @@ value xmatrix_invalid_constructor(vm *v, int nargs, value *args) { * XMatrix veneer class * ********************************************************************** */ +/** Prints a matrix */ +value XMatrix_print(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + xmatrix_print(v, m); + return MORPHO_NIL; +} + value XMatrix_add(vm *v, int nargs, value *args) { return MORPHO_NIL; } +/* --------- + * index() + * --------- */ + +value _getindex(vm *v, objectxmatrix *m, unsigned int i, unsigned int j) { + double out; + if (xmatrix_getelement(m, i, j, &out)) return MORPHO_FLOAT(out); + //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); + return MORPHO_NIL; +} + +value XMatrix_index__int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _getindex(v, m, i, 0); +} + +value XMatrix_index__int_int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _getindex(v, m, i, j); +} + +/* --------- + * setindex() + * --------- */ + +value _setindex(vm *v, objectxmatrix *m, unsigned int i, unsigned int j, value in) { + double val=0.0; + if (!morpho_valuetofloat(in, &val)) true; // Should raise an error (Matrix doesn't!) + if (!xmatrix_setelement(m, i, j, val)) true; //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); + return MORPHO_NIL; +} + +value XMatrix_setindex__int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _setindex(v, m, i, 0, MORPHO_GETARG(args, 1)); +} + +value XMatrix_setindex__int_int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _setindex(v, m, i, j, MORPHO_GETARG(args, 2)); +} + MORPHO_BEGINCLASS(XMatrix) -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.h b/src/xmatrix.h index a4a2006f..48951f29 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -14,6 +14,12 @@ extern objecttype objectxmatrixtype; #define OBJECT_XMATRIX objectxmatrixtype +/** Matrices are a purely numerical collection type oriented toward linear algebra. + Elements are stored in column-major format, i.e. + [ 1 2 ] + [ 3 4 ] + is stored ( 1, 3, 2, 4 ) in memory. This is for compatibility with standard linear algebra packages */ + typedef struct { object obj; int nrows; @@ -23,6 +29,12 @@ typedef struct { double matrixdata[]; } objectxmatrix; +/** Tests whether an object is a matrix */ +#define MORPHO_ISXMATRIX(val) object_istype(val, OBJECT_XMATRIX) + +/** Gets the object as an matrix */ +#define MORPHO_GETXMATRIX(val) ((objectxmatrix *) MORPHO_GETOBJECT(val)) + /* ------------------------------------------------------- * Matrix veneer class * ------------------------------------------------------- */ diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho index 58b69eed..c8476848 100644 --- a/test/newlinalg.morpho +++ b/test/newlinalg.morpho @@ -1,8 +1,12 @@ import newlinalg -var a = XMatrix(2,2) -//var b = XMatrix([1,2,3]) - +var a = XMatrix(2,1) +a[0]=1 print a -//print b + +var b = XMatrix(2,2) +b[0,0]=1 +print b +print b[0] +print b[0,0] From bd9873efd8f4d49d12d69f0c46e75d683ce8c582 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 30 Nov 2025 20:08:40 -0500 Subject: [PATCH 005/156] Correct function labelling --- src/xmatrix.c | 28 +++++++++++++--------------- 1 file changed, 13 insertions(+), 15 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index 9ba74122..0acc5591 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -4,12 +4,11 @@ * @brief New matrices */ +#define MORPHO_INCLUDE_LINALG + #include "newlinalg.h" #include "xmatrix.h" -#define MORPHO_INCLUDE_LINALG -#include - /* ********************************************************************** * XMatrix objects * ********************************************************************** */ @@ -97,12 +96,11 @@ void xmatrix_print(vm *v, objectxmatrix *m) { } } - /* ********************************************************************** * XMatrix constructor * ********************************************************************** */ -value xmatrix_constructor(vm *v, int nargs, value *args) { +value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -111,12 +109,12 @@ value xmatrix_constructor(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -value xmatrix_list_constructor(vm *v, int nargs, value *args) { +value xmatrix_constructor__list(vm *v, int nargs, value *args) { return MORPHO_NIL; } -value xmatrix_invalid_constructor(vm *v, int nargs, value *args) { - //morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); +value xmatrix_constructor__err(vm *v, int nargs, value *args) { + morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; } @@ -170,13 +168,13 @@ value _setindex(vm *v, objectxmatrix *m, unsigned int i, unsigned int j, value i return MORPHO_NIL; } -value XMatrix_setindex__int(vm *v, int nargs, value *args) { +value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); return _setindex(v, m, i, 0, MORPHO_GETARG(args, 1)); } -value XMatrix_setindex__int_int(vm *v, int nargs, value *args) { +value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -188,8 +186,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSE MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** @@ -203,8 +201,8 @@ void xmatrix_initialize(void) { object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_list_constructor, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_invalid_constructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); } From d8e497719839e3e3755ec4cfd955667e8d974c8f Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 30 Nov 2025 20:37:01 -0500 Subject: [PATCH 006/156] Include BLAS and LAPACK Update CMakeLists --- CMakeLists.txt | 48 +++++++++++++++++++++++++++++++++++++++- src/xmatrix.c | 51 ++++++++++++++++++++++++++++++++++++++++--- test/newlinalg.morpho | 6 +++++ 3 files changed, 101 insertions(+), 4 deletions(-) diff --git a/CMakeLists.txt b/CMakeLists.txt index e53fa9a2..3b3a8801 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -11,7 +11,9 @@ set_target_properties(newlinalg PROPERTIES PREFIX "") # Add sources add_subdirectory(src) -### +#------------------------------------------------------------------------------- +# Morpho library +#------------------------------------------------------------------------------- # Locate the morpho.h header file and store in MORPHO_HEADER find_file(MORPHO_HEADER @@ -48,6 +50,50 @@ find_library(MORPHO_LIBRARY target_link_libraries(newlinalg ${MORPHO_LIBRARY}) +#------------------------------------------------------------------------------- +# BLAS and LAPACK +#------------------------------------------------------------------------------- + +message(STATUS "Searching for BLAS and LAPACK") +# Locate a lapack version +# Currently we prefer LAPACKE +# TODO: Fix morpho source to select between lapack and lapacke +find_library(LAPACK_LIBRARY + NAMES lapacke liblapacke lapack liblapack libopenblas + HINTS + "C:\\Program Files\\Morpho\\lib\\" +) +if (LAPACK_LIBRARY) +message(STATUS "Found LAPACK at ${LAPACK_LIBRARY}") +endif() + +# Locate cblas +find_library(CBLAS_LIBRARY + NAMES cblas libcblas blas libblas openblas libopenblas + HINTS + "C:\\Program Files\\Morpho\\lib\\" +) +if (CBLAS_LIBRARY) +message(STATUS "Found blas at ${CBLAS_LIBRARY}") +endif() + +# Find cblas.h header file +find_path(CBLAS_INCLUDE cblas.h + HINTS + "C:\\Program Files\\Morpho\\include\\lapack") + +# Add cblas headers to include folders +target_include_directories(newlinalg PUBLIC ${CBLAS_INCLUDE}) + +message(STATUS "Found cblas headers at ${CBLAS_INCLUDE}") + +target_link_libraries(newlinalg ${CBLAS_LIBRARY}) +target_link_libraries(newlinalg ${LAPACK_LIBRARY}) + +#------------------------------------------------------------------------------- +# Install +#------------------------------------------------------------------------------- + set(CMAKE_INSTALL_PREFIX ..) # Install the resulting binary diff --git a/src/xmatrix.c b/src/xmatrix.c index 0acc5591..25795eae 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -79,6 +79,33 @@ bool xmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int co return true; } +/* ---------------------- + * Arithmetic operations + * ---------------------- */ + +/** Performs a + b -> out. */ +objectmatrixerror xmatrix_add(objectxmatrix *a, objectxmatrix *b, objectxmatrix *out) { + if (a->ncols==b->ncols && a->ncols==out->ncols && + a->nrows==b->nrows && a->nrows==out->nrows) { + if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); + cblas_daxpy(a->ncols * a->nrows, 1.0, b->elements, 1, out->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Performs lambda*a + beta -> out. */ +objectmatrixerror xmatrix_addscalar(objectxmatrix *a, double lambda, double beta, objectxmatrix *out) { + if (a->ncols==out->ncols && a->nrows==out->nrows) { + for (unsigned int i=0; inrows*out->ncols; i++) { + out->elements[i]=lambda*a->elements[i]+beta; + } + return MATRIX_OK; + } + + return MATRIX_INCMPTBLDIM; +} + /* ---------------------- * Display * ---------------------- */ @@ -129,8 +156,25 @@ value XMatrix_print(vm *v, int nargs, value *args) { return MORPHO_NIL; } -value XMatrix_add(vm *v, int nargs, value *args) { - return MORPHO_NIL; +/* --------- + * add() + * --------- */ + +value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectxmatrix *new = NULL; + value out=MORPHO_NIL; + + if (a->ncols==b->ncols && a->nrows==b->nrows) { + new=xmatrix_new(a->nrows, a->ncols, false); + if (new) { + xmatrix_add(a, b, new); + out = morpho_wrapandbind(v, (object *) new); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + + return out; } /* --------- @@ -183,7 +227,8 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +//MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho index c8476848..d75212d2 100644 --- a/test/newlinalg.morpho +++ b/test/newlinalg.morpho @@ -7,6 +7,12 @@ print a var b = XMatrix(2,2) b[0,0]=1 +b[0,1]=2 +b[1,0]=3 +b[1,1]=4 + print b print b[0] print b[0,0] + +print b+b From acb255a5e61044f620866880401e4cfe34a08392 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 30 Nov 2025 21:39:26 -0500 Subject: [PATCH 007/156] Simplify interfaces and add cloning --- src/xcomplexmatrix.c | 22 +++++++++++ src/xcomplexmatrix.h | 2 + src/xmatrix.c | 79 +++++++++++++++++++++++++-------------- src/xmatrix.h | 2 + test/complexmatrix.morpho | 5 +++ test/newlinalg.morpho | 6 +++ 6 files changed, 88 insertions(+), 28 deletions(-) create mode 100644 test/complexmatrix.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index e0d84891..0be53b5a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -5,3 +5,25 @@ */ #include "xcomplexmatrix.h" + +objecttype objectcomplexmatrixtype; + +//typedef objectxmatrix objectcomplexmatrix; + +/* ********************************************************************** + * ComplexMatrix veneer class + * ********************************************************************** */ + +/* + MORPHO_BEGINCLASS(ComplexMatrix) + MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY) + MORPHO_ENDCLASS + */ + +/* ********************************************************************** + * Initialization + * ********************************************************************** */ + +void complexmatrix_initialize(void) { + objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); +} diff --git a/src/xcomplexmatrix.h b/src/xcomplexmatrix.h index 7cfb9142..fbce1b36 100644 --- a/src/xcomplexmatrix.h +++ b/src/xcomplexmatrix.h @@ -9,4 +9,6 @@ #include "newlinalg.h" +void complexmatrix_initialize(void); + #endif diff --git a/src/xmatrix.c b/src/xmatrix.c index 25795eae..a2ea6e67 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -4,10 +4,12 @@ * @brief New matrices */ +#define ACCELERATE_NEW_LAPACK #define MORPHO_INCLUDE_LINALG #include "newlinalg.h" -#include "xmatrix.h" +#include "xmatrix.h" +#include "xcomplexmatrix.h" /* ********************************************************************** * XMatrix objects @@ -42,6 +44,7 @@ objecttypedefn objectxmatrixdefn = { * Constructors * ---------------------- */ +/** Create a new matrix */ objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { int nels = nrows*ncols; objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), OBJECT_XMATRIX); @@ -57,6 +60,14 @@ objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { return new; } +/** Clone a matrix */ +objectxmatrix *xmatrix_clone(objectxmatrix *in) { + objectxmatrix *new = xmatrix_new(in->nrows, in->ncols, false); + + if (new) cblas_dcopy(in->ncols * in->nrows, in->elements, 1, new->elements, 1); + return new; +} + /* ---------------------- * Accessing elements * ---------------------- */ @@ -83,26 +94,14 @@ bool xmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int co * Arithmetic operations * ---------------------- */ -/** Performs a + b -> out. */ -objectmatrixerror xmatrix_add(objectxmatrix *a, objectxmatrix *b, objectxmatrix *out) { - if (a->ncols==b->ncols && a->ncols==out->ncols && - a->nrows==b->nrows && a->nrows==out->nrows) { - if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); - cblas_daxpy(a->ncols * a->nrows, 1.0, b->elements, 1, out->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; -} - -/** Performs lambda*a + beta -> out. */ -objectmatrixerror xmatrix_addscalar(objectxmatrix *a, double lambda, double beta, objectxmatrix *out) { - if (a->ncols==out->ncols && a->nrows==out->nrows) { - for (unsigned int i=0; inrows*out->ncols; i++) { - out->elements[i]=lambda*a->elements[i]+beta; - } +/** Performs out <- alpha*x + y */ +objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y, objectxmatrix *out) { + if (x->ncols==y->ncols && y->ncols==out->ncols && + x->nrows==y->nrows && y->nrows==out->nrows) { + if (x!=out) cblas_dcopy(x->ncols * x->nrows, x->elements, 1, out->elements, 1); + cblas_daxpy(x->ncols * x->nrows, alpha, y->elements, 1, out->elements, 1); return MATRIX_OK; } - return MATRIX_INCMPTBLDIM; } @@ -149,6 +148,10 @@ value xmatrix_constructor__err(vm *v, int nargs, value *args) { * XMatrix veneer class * ********************************************************************** */ +/* ---------------------- + * Common utility methods + * ---------------------- */ + /** Prints a matrix */ value XMatrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -156,11 +159,22 @@ value XMatrix_print(vm *v, int nargs, value *args) { return MORPHO_NIL; } -/* --------- - * add() - * --------- */ +/** Clones a matrix */ +value XMatrix_clone(vm *v, int nargs, value *args) { + value out=MORPHO_NIL; + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *new=xmatrix_clone(a); + if (new) { + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + return out; +} -value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { +/* ---------- + * Arithmetic + * ---------- */ + +static value _axpy(vm *v, int nargs, value *args, double alpha) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); objectxmatrix *new = NULL; @@ -169,7 +183,7 @@ value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { if (a->ncols==b->ncols && a->nrows==b->nrows) { new=xmatrix_new(a->nrows, a->ncols, false); if (new) { - xmatrix_add(a, b, new); + xmatrix_axpy(alpha, a, b, new); out = morpho_wrapandbind(v, (object *) new); } } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); @@ -177,11 +191,19 @@ value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { return out; } +value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { + return _axpy(v,nargs,args,1.0); +} + +value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { + return _axpy(v,nargs,args,-1.0); +} + /* --------- * index() * --------- */ -value _getindex(vm *v, objectxmatrix *m, unsigned int i, unsigned int j) { +static value _getindex(vm *v, objectxmatrix *m, unsigned int i, unsigned int j) { double out; if (xmatrix_getelement(m, i, j, &out)) return MORPHO_FLOAT(out); //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); @@ -227,8 +249,9 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -//MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "(XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), @@ -243,11 +266,11 @@ void xmatrix_initialize(void) { objectxmatrixtype=object_addtype(&objectxmatrixdefn); value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), MORPHO_NIL); - object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); + + complexmatrix_initialize(); } - diff --git a/src/xmatrix.h b/src/xmatrix.h index 48951f29..b8591d57 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -14,6 +14,8 @@ extern objecttype objectxmatrixtype; #define OBJECT_XMATRIX objectxmatrixtype +extern objecttypedefn objectxmatrixdefn; + /** Matrices are a purely numerical collection type oriented toward linear algebra. Elements are stored in column-major format, i.e. [ 1 2 ] diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho new file mode 100644 index 00000000..c6928e2f --- /dev/null +++ b/test/complexmatrix.morpho @@ -0,0 +1,5 @@ + +import newlinalg + +var a = ComplexMatrix(2,2) +print a diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho index d75212d2..3e9176e2 100644 --- a/test/newlinalg.morpho +++ b/test/newlinalg.morpho @@ -16,3 +16,9 @@ print b[0] print b[0,0] print b+b + +print b-b + +var c = b.clone() + +print b+c From 18d4c5138618271531d4416981fd348fd8bc5c3b Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 3 Dec 2025 20:49:04 -0500 Subject: [PATCH 008/156] Complex matrix implementation --- src/xcomplexmatrix.c | 22 +++++++++++++++++++++- src/xmatrix.c | 2 +- 2 files changed, 22 insertions(+), 2 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 0be53b5a..59b98115 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -5,10 +5,30 @@ */ #include "xcomplexmatrix.h" +#include objecttype objectcomplexmatrixtype; -//typedef objectxmatrix objectcomplexmatrix; +typedef objectxmatrix objectcomplexmatrix; + +/** Sets a matrix element. */ +bool complexmatrix_setelement(objectcomplexmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex value) { + if (!(colncols && rownrows)) return false; + + unsigned int ix = col*matrix->nrows+row; + matrix->elements[ix]=creal(value); + matrix->elements[ix+1]=cimag(value); + return true; +} + +/** Gets a matrix element */ +bool complexmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex *value) { + if (!(colncols && rownrows)) return false; + + if (value) *value=MCBuild(0.0,0.0); + //matrix->elements[col*matrix->nrows+row]; + return true; +} /* ********************************************************************** * ComplexMatrix veneer class diff --git a/src/xmatrix.c b/src/xmatrix.c index a2ea6e67..38199df3 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -123,7 +123,7 @@ void xmatrix_print(vm *v, objectxmatrix *m) { } /* ********************************************************************** - * XMatrix constructor + * XMatrix constructors * ********************************************************************** */ value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { From 3dba2e430131796d1a82cda8464754aaa3efc46e Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 4 Dec 2025 20:49:22 -0500 Subject: [PATCH 009/156] Change type definitions --- src/xcomplexmatrix.c | 38 ++++++++++++++++++++++++++++++++------ src/xcomplexmatrix.h | 6 ++++++ src/xmatrix.c | 38 +++++++++++++++++++++----------------- src/xmatrix.h | 10 +++++++--- 4 files changed, 66 insertions(+), 26 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 59b98115..a957cbd0 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -8,6 +8,7 @@ #include objecttype objectcomplexmatrixtype; +#define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype typedef objectxmatrix objectcomplexmatrix; @@ -15,7 +16,7 @@ typedef objectxmatrix objectcomplexmatrix; bool complexmatrix_setelement(objectcomplexmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex value) { if (!(colncols && rownrows)) return false; - unsigned int ix = col*matrix->nrows+row; + int ix = 2*(col*matrix->nrows+row); matrix->elements[ix]=creal(value); matrix->elements[ix+1]=cimag(value); return true; @@ -25,20 +26,40 @@ bool complexmatrix_setelement(objectcomplexmatrix *matrix, unsigned int row, uns bool complexmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex *value) { if (!(colncols && rownrows)) return false; + int ix = 2*(col*matrix->nrows+row); if (value) *value=MCBuild(0.0,0.0); //matrix->elements[col*matrix->nrows+row]; return true; } +/* ********************************************************************** + * ComplexMatrix constructors + * ********************************************************************** */ + +value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { + int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + + objectcomplexmatrix *new=NULL; //xmatrix_new(nrows, ncols, true); + + return morpho_wrapandbind(v, (object *) new); +} + /* ********************************************************************** * ComplexMatrix veneer class * ********************************************************************** */ -/* - MORPHO_BEGINCLASS(ComplexMatrix) - MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY) - MORPHO_ENDCLASS - */ +value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + //return _getindex(v, m, i, j); + return MORPHO_NIL; +} + +MORPHO_BEGINCLASS(ComplexMatrix) +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY) +MORPHO_ENDCLASS /* ********************************************************************** * Initialization @@ -46,4 +67,9 @@ bool complexmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned void complexmatrix_initialize(void) { objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); + + value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), MORPHO_NIL); + object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); + + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); } diff --git a/src/xcomplexmatrix.h b/src/xcomplexmatrix.h index fbce1b36..71d50ee2 100644 --- a/src/xcomplexmatrix.h +++ b/src/xcomplexmatrix.h @@ -9,6 +9,12 @@ #include "newlinalg.h" +/* ------------------------------------------------------- + * ComplexMatrix veneer class + * ------------------------------------------------------- */ + +#define COMPLEXMATRIX_CLASSNAME "ComplexMatrix" + void complexmatrix_initialize(void); #endif diff --git a/src/xmatrix.c b/src/xmatrix.c index 38199df3..da79afbf 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -19,8 +19,7 @@ objecttype objectxmatrixtype; /** Matrix object definitions */ size_t objectxmatrix_sizefn(object *obj) { - return sizeof(objectxmatrix)+sizeof(double) * - ((objectxmatrix *) obj)->nels; + return sizeof(objectxmatrix)+sizeof(double) * ((objectxmatrix *) obj)->nels; } void objectxmatrix_printfn(object *obj, void *v) { @@ -45,13 +44,14 @@ objecttypedefn objectxmatrixdefn = { * ---------------------- */ /** Create a new matrix */ -objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { - int nels = nrows*ncols; - objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), OBJECT_XMATRIX); +objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { + MatrixCount_t nels = nrows*ncols*nvals; + objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), type); if (new) { new->nrows=nrows; new->ncols=ncols; + new->nvals=nvals; new->nels=nels; new->elements=new->matrixdata; if (zero) memset(new->elements, 0, nels*sizeof(double)); @@ -60,6 +60,10 @@ objectxmatrix *xmatrix_new(int nrows, int ncols, bool zero) { return new; } +objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return xmatrix_newwithtype(OBJECT_XMATRIX, nrows, ncols, 1, zero); +} + /** Clone a matrix */ objectxmatrix *xmatrix_clone(objectxmatrix *in) { objectxmatrix *new = xmatrix_new(in->nrows, in->ncols, false); @@ -74,7 +78,7 @@ objectxmatrix *xmatrix_clone(objectxmatrix *in) { /** @brief Sets a matrix element. @returns true if the element is in the range of the matrix, false otherwise */ -bool xmatrix_setelement(objectxmatrix *matrix, unsigned int row, unsigned int col, double value) { +bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { if (!(colncols && rownrows)) return false; matrix->elements[col*matrix->nrows+row]=value; @@ -83,7 +87,7 @@ bool xmatrix_setelement(objectxmatrix *matrix, unsigned int row, unsigned int co /** @brief Gets a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -bool xmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int col, double *value) { +bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { if (!(colncols && rownrows)) return false; if (value) *value=matrix->elements[col*matrix->nrows+row]; @@ -111,9 +115,9 @@ objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y, /** Prints a matrix */ void xmatrix_print(vm *v, objectxmatrix *m) { - for (int i=0; inrows; i++) { // Rows run from 0...m + for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); - for (int j=0; jncols; j++) { // Columns run from 0...k + for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k double val=0.0; xmatrix_getelement(m, i, j, &val); morpho_printf(v, "%g ", (fabs(val) Date: Thu, 4 Dec 2025 21:14:41 -0500 Subject: [PATCH 010/156] Constructor for ComplexMatrix --- src/xcomplexmatrix.c | 34 +++++++++++++++++++++++++--------- src/xmatrix.c | 5 +++-- src/xmatrix.h | 6 ++++++ 3 files changed, 34 insertions(+), 11 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index a957cbd0..79f5b05a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -12,23 +12,39 @@ objecttype objectcomplexmatrixtype; typedef objectxmatrix objectcomplexmatrix; +/* ********************************************************************** + * ComplexMatrix utility functions + * ********************************************************************** */ + +/* ---------------------- + * Constructor + * ---------------------- */ + +/** Create a new complex matrix */ +objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return (objectcomplexmatrix *) xmatrix_newwithtype(OBJECT_COMPLEXMATRIX, nrows, ncols, 2, zero); +} + +/* ---------------------- + * Element access + * ---------------------- */ + /** Sets a matrix element. */ -bool complexmatrix_setelement(objectcomplexmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex value) { +bool complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { if (!(colncols && rownrows)) return false; - int ix = 2*(col*matrix->nrows+row); + MatrixCount_t ix = 2*(col*matrix->nrows+row); matrix->elements[ix]=creal(value); matrix->elements[ix+1]=cimag(value); return true; } /** Gets a matrix element */ -bool complexmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned int col, MorphoComplex *value) { +bool complexmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { if (!(colncols && rownrows)) return false; - int ix = 2*(col*matrix->nrows+row); - if (value) *value=MCBuild(0.0,0.0); - //matrix->elements[col*matrix->nrows+row]; + MatrixCount_t ix = 2*(col*matrix->nrows+row); + if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); return true; } @@ -37,10 +53,10 @@ bool complexmatrix_getelement(objectxmatrix *matrix, unsigned int row, unsigned * ********************************************************************** */ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { - int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + MatrixIdx_t ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - objectcomplexmatrix *new=NULL; //xmatrix_new(nrows, ncols, true); + objectcomplexmatrix *new=complexmatrix_new(nrows, ncols, true); return morpho_wrapandbind(v, (object *) new); } diff --git a/src/xmatrix.c b/src/xmatrix.c index da79afbf..7501bc49 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -43,7 +43,7 @@ objecttypedefn objectxmatrixdefn = { * Constructors * ---------------------- */ -/** Create a new matrix */ +/** Create a generic matrix with given type and layout */ objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { MatrixCount_t nels = nrows*ncols*nvals; objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), type); @@ -60,13 +60,14 @@ objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx return new; } +/** Create a new real matrix */ objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { return xmatrix_newwithtype(OBJECT_XMATRIX, nrows, ncols, 1, zero); } /** Clone a matrix */ objectxmatrix *xmatrix_clone(objectxmatrix *in) { - objectxmatrix *new = xmatrix_new(in->nrows, in->ncols, false); + objectxmatrix *new = xmatrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); if (new) cblas_dcopy(in->ncols * in->nrows, in->elements, 1, new->elements, 1); return new; diff --git a/src/xmatrix.h b/src/xmatrix.h index 5468b357..e180a413 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -49,4 +49,10 @@ typedef struct { void xmatrix_initialize(void); +/* ------------------------------------------------------- + * Interface + * ------------------------------------------------------- */ + +objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); + #endif From 519f14a7cad9b8cd8bf58f744fe7a9e6d12c2916 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 4 Dec 2025 21:34:51 -0500 Subject: [PATCH 011/156] Generic objectxmatrix_printfn --- src/xmatrix.c | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index 7501bc49..e99d9162 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -23,7 +23,10 @@ size_t objectxmatrix_sizefn(object *obj) { } void objectxmatrix_printfn(object *obj, void *v) { - morpho_printf(v, "<" XMATRIX_CLASSNAME ">"); + objectclass *klass=object_getveneerclass(obj->type); + morpho_printf(v, "<"); + morpho_printvalue(v, klass->name); + morpho_printf(v, ">"); } objecttypedefn objectxmatrixdefn = { From 269be269568951878f97d376882b732e6e7fc113 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 4 Dec 2025 21:39:20 -0500 Subject: [PATCH 012/156] Correct indices --- src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 79f5b05a..e97b65dc 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -33,7 +33,7 @@ objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, boo bool complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { if (!(colncols && rownrows)) return false; - MatrixCount_t ix = 2*(col*matrix->nrows+row); + MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); matrix->elements[ix]=creal(value); matrix->elements[ix+1]=cimag(value); return true; diff --git a/src/xmatrix.c b/src/xmatrix.c index e99d9162..2f7a7814 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -85,7 +85,7 @@ objectxmatrix *xmatrix_clone(objectxmatrix *in) { bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { if (!(colncols && rownrows)) return false; - matrix->elements[col*matrix->nrows+row]=value; + matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; return true; } @@ -94,7 +94,7 @@ bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { if (!(colncols && rownrows)) return false; - if (value) *value=matrix->elements[col*matrix->nrows+row]; + if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; return true; } From e1b2aa9051f052d0174b13ed2c678b0b022d6774 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 5 Dec 2025 07:39:47 -0500 Subject: [PATCH 013/156] Printing of ComplexMatrix type --- src/xcomplexmatrix.c | 47 ++++++++++++++++++++++++++++++++++++--- src/xmatrix.c | 29 +++++++++++++++++++----- src/xmatrix.h | 12 ++++++++++ test/complexmatrix.morpho | 6 +++++ 4 files changed, 86 insertions(+), 8 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index e97b65dc..fcbd3a1b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -16,6 +16,17 @@ typedef objectxmatrix objectcomplexmatrix; * ComplexMatrix utility functions * ********************************************************************** */ +/* ---------------------- + * Callbacks + * ---------------------- */ + +static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { + double *elptr; + xmatrix_getelementptr(m, i, j, &elptr); + objectcomplex cmplx = MORPHO_STATICCOMPLEX(elptr[0], elptr[1]); + complex_print(v, &cmplx); +} + /* ---------------------- * Constructor * ---------------------- */ @@ -40,7 +51,7 @@ bool complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, Matr } /** Gets a matrix element */ -bool complexmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { +bool complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { if (!(colncols && rownrows)) return false; MatrixCount_t ix = 2*(col*matrix->nrows+row); @@ -65,15 +76,45 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { * ComplexMatrix veneer class * ********************************************************************** */ +/* ---------------------- + * Common utility methods + * ---------------------- */ + +/** Prints a matrix */ +value ComplexMatrix_print(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + xmatrix_print(v, m, _printelfn); + return MORPHO_NIL; +} + +/* --------- + * index() + * --------- */ + +static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { + double *el; + xmatrix_getelementptr(m, i, j, &el); //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); + objectcomplex *new = object_newcomplex(el[0], el[1]); + return morpho_wrapandbind(v, (object *) new); + return MORPHO_NIL; +} + +value ComplexMatrix_index__int(vm *v, int nargs, value *args) { + objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _getindex(v, m, i, 0); +} + value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - //return _getindex(v, m, i, j); - return MORPHO_NIL; + return _getindex(v, m, i, j); } MORPHO_BEGINCLASS(ComplexMatrix) +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/src/xmatrix.c b/src/xmatrix.c index 2f7a7814..2b460238 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -42,6 +42,16 @@ objecttypedefn objectxmatrixdefn = { * XMatrix utility functions * ********************************************************************** */ +/* ---------------------- + * XMatrix callbacks + * ---------------------- */ + +static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { + double val; + xmatrix_getelement(m, i, j, &val); + morpho_printf(v, "%g", (fabs(val)ncols && rownrows)) return false; + + if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); + return true; +} + /* ---------------------- * Arithmetic operations * ---------------------- */ @@ -118,13 +137,12 @@ objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y, * ---------------------- */ /** Prints a matrix */ -void xmatrix_print(vm *v, objectxmatrix *m) { +void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_elprintfn fn) { for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - double val=0.0; - xmatrix_getelement(m, i, j, &val); - morpho_printf(v, "%g ", (fabs(val)nrows-1 ? "\n" : "")); } @@ -163,7 +181,7 @@ value xmatrix_constructor__err(vm *v, int nargs, value *args) { /** Prints a matrix */ value XMatrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - xmatrix_print(v, m); + xmatrix_print(v, m, _printelfn); return MORPHO_NIL; } @@ -260,6 +278,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSE MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "(XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +//MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index e180a413..72d01929 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -41,6 +41,12 @@ typedef struct { /** Gets the object as an matrix */ #define MORPHO_GETXMATRIX(val) ((objectxmatrix *) MORPHO_GETOBJECT(val)) +/* ------------------------------------------------------- + * Matrix callback types + * ------------------------------------------------------- */ + +typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j); + /* ------------------------------------------------------- * Matrix veneer class * ------------------------------------------------------- */ @@ -55,4 +61,10 @@ void xmatrix_initialize(void); objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); +bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); +bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); +bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); + +void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_elprintfn fn); + #endif diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index c6928e2f..51399550 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -1,5 +1,11 @@ import newlinalg +var a = XMatrix(2,2) +print a + var a = ComplexMatrix(2,2) print a + +print a[0] +print a[0,0] \ No newline at end of file From d076fdfde7d863605573d06fb674f2675b7d653d Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 10 Dec 2025 22:50:48 -0500 Subject: [PATCH 014/156] Complex matrix addition --- src/xcomplexmatrix.c | 31 +++++++++++++++++- src/xmatrix.c | 68 ++++++++++++++++++++++++++++++++------- src/xmatrix.h | 3 ++ test/complexmatrix.morpho | 9 +++++- 4 files changed, 98 insertions(+), 13 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index fcbd3a1b..0ca30b52 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -112,10 +112,39 @@ value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { return _getindex(v, m, i, j); } +/* --------- + * setIndex() + * --------- */ + +static value _setindex(vm *v, objectcomplexmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { + if (MORPHO_ISCOMPLEX(in) && + !complexmatrix_setelement(m, i, j, MORPHO_GETCOMPLEX(in)->Z)) { + // Should raise an error + } + return MORPHO_NIL; +} + +value ComplexMatrix_setindex__int_x(vm *v, int nargs, value *args) { + objectcomplexmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _setindex(v, m, i, 0, MORPHO_GETARG(args, 1)); +} + +value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { + objectcomplexmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _setindex(v, m, i, j, MORPHO_GETARG(args, 2)); +} + MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.c b/src/xmatrix.c index 2b460238..a5fff09f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -82,7 +82,7 @@ objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { objectxmatrix *xmatrix_clone(objectxmatrix *in) { objectxmatrix *new = xmatrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); - if (new) cblas_dcopy(in->ncols * in->nrows, in->elements, 1, new->elements, 1); + if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); return new; } @@ -121,17 +121,32 @@ bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t c * Arithmetic operations * ---------------------- */ -/** Performs out <- alpha*x + y */ -objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y, objectxmatrix *out) { - if (x->ncols==y->ncols && y->ncols==out->ncols && - x->nrows==y->nrows && y->nrows==out->nrows) { - if (x!=out) cblas_dcopy(x->ncols * x->nrows, x->elements, 1, out->elements, 1); - cblas_daxpy(x->ncols * x->nrows, alpha, y->elements, 1, out->elements, 1); +/** Vector addition: Performs y <- alpha*x + y */ +objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { + if (x->ncols==y->ncols && x->nrows==y->nrows) { + cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); return MATRIX_OK; } return MATRIX_INCMPTBLDIM; } +/** Scales a matrix */ +objectmatrixerror xmatrix_scale(objectxmatrix *a, double scale) { + cblas_dscal((__LAPACK_int) a->nels, scale, a->elements, 1); + return MATRIX_OK; +} + +/** Performs a * b -> out */ +objectmatrixerror xmatrix_mul(objectxmatrix *a, objectxmatrix *b, objectxmatrix *out) { + if (a->ncols==b->nrows && a->nrows==out->nrows && b->ncols==out->ncols) { + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, 1.0, a->elements, a->nrows, b->elements, b->nrows, 0.0, out->elements, out->nrows); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} +//double complex alpha, beta; +//cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, &alpha, a->elements, a->nrows, b->elements, b->nrows, &beta, out->elements, out->nrows); + /* ---------------------- * Display * ---------------------- */ @@ -207,11 +222,11 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { value out=MORPHO_NIL; if (a->ncols==b->ncols && a->nrows==b->nrows) { - new=xmatrix_new(a->nrows, a->ncols, false); + new=xmatrix_clone(b); if (new) { - xmatrix_axpy(alpha, a, b, new); + xmatrix_axpy(alpha, a, new); out = morpho_wrapandbind(v, (object *) new); - } + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); return out; @@ -225,6 +240,36 @@ value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,-1.0); } +value XMatrix_mul__float(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + double scale; + morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); + + objectxmatrix *new = xmatrix_clone(a); + if (new) { + xmatrix_scale(new, scale); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + return out; +} + +value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->nrows) { + objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); + if (new) { + xmatrix_mul(a, b, new); + out = morpho_wrapandbind(v, (object *) new); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + return out; +} + /* --------- * index() * --------- */ @@ -278,7 +323,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSE MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "(XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), -//MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 72d01929..0cb60a7e 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -55,6 +55,9 @@ typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, Matri void xmatrix_initialize(void); +value XMatrix_add__xmatrix(vm *v, int nargs, value *args); +value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index 51399550..cc0ec5a8 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -2,10 +2,17 @@ import newlinalg var a = XMatrix(2,2) +a[0,0]=2 +a[1,1]=2 print a var a = ComplexMatrix(2,2) print a print a[0] -print a[0,0] \ No newline at end of file +print a[0,0] + +a[0,0] = 1+im +a[1,1] = 1-im + +print a+a From d61dd38d52f19ae71e41a6a5c623a1cbd67677ce Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 11 Dec 2025 07:24:15 -0500 Subject: [PATCH 015/156] Complex matrix multiplication --- src/xcomplexmatrix.c | 49 +++++++++++++++++++++++++++++++++++++-- src/xmatrix.c | 22 ++++++++---------- src/xmatrix.h | 1 + test/complexmatrix.morpho | 4 ++++ 4 files changed, 62 insertions(+), 14 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 0ca30b52..9c4ed277 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -4,9 +4,15 @@ * @brief New linear algebra library */ -#include "xcomplexmatrix.h" +#define ACCELERATE_NEW_LAPACK +#define MORPHO_INCLUDE_LINALG + #include +#include "newlinalg.h" +#include "xmatrix.h" +#include "xcomplexmatrix.h" + objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype @@ -59,6 +65,23 @@ bool complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, Matr return true; } +/* ---------------------- + * Complex arithmetic + * ---------------------- */ + +/** Performs c <- alpha*(a*b) + beta*c with complex matrices */ +objectmatrixerror complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxmatrix *b, MorphoComplex beta, objectxmatrix *c) { + if (a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols) { + cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, + a->nrows, b->ncols, a->ncols, + &alpha, (__LAPACK_double_complex *) a->elements, + a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, + &beta, (__LAPACK_double_complex *) c->elements, c->nrows); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + /* ********************************************************************** * ComplexMatrix constructors * ********************************************************************** */ @@ -87,6 +110,26 @@ value ComplexMatrix_print(vm *v, int nargs, value *args) { return MORPHO_NIL; } +/* ---------------------- + * Arithmetic + * ---------------------- */ + +value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->nrows) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); + if (new) { + MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); + complexmatrix_mmul(alpha, a, b, beta, new); + out = morpho_wrapandbind(v, (object *) new); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + return out; +} + /* --------- * index() * --------- */ @@ -144,7 +187,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMat MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.c b/src/xmatrix.c index a5fff09f..b9d7f915 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -130,22 +130,20 @@ objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) return MATRIX_INCMPTBLDIM; } -/** Scales a matrix */ +/** Scales a matrix a <- scale * a >*/ objectmatrixerror xmatrix_scale(objectxmatrix *a, double scale) { cblas_dscal((__LAPACK_int) a->nels, scale, a->elements, 1); return MATRIX_OK; } -/** Performs a * b -> out */ -objectmatrixerror xmatrix_mul(objectxmatrix *a, objectxmatrix *b, objectxmatrix *out) { - if (a->ncols==b->nrows && a->nrows==out->nrows && b->ncols==out->ncols) { - cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, 1.0, a->elements, a->nrows, b->elements, b->nrows, 0.0, out->elements, out->nrows); +/** Performs c <- alpha*(a*b) + beta*c*/ +objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *a, objectxmatrix *b, double beta, objectxmatrix *c) { + if (a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols) { + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, alpha, a->elements, a->nrows, b->elements, b->nrows, beta, c->elements, c->nrows); return MATRIX_OK; } return MATRIX_INCMPTBLDIM; } -//double complex alpha, beta; -//cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, &alpha, a->elements, a->nrows, b->elements, b->nrows, &beta, out->elements, out->nrows); /* ---------------------- * Display @@ -263,7 +261,7 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { if (a->ncols==b->nrows) { objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); if (new) { - xmatrix_mul(a, b, new); + xmatrix_mmul(1.0, a, b, 0.0, new); out = morpho_wrapandbind(v, (object *) new); } } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); @@ -321,10 +319,10 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "(XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "(XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "(XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 0cb60a7e..5ce10400 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -57,6 +57,7 @@ void xmatrix_initialize(void); value XMatrix_add__xmatrix(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); +value XMatrix_mul__float(vm *v, int nargs, value *args); /* ------------------------------------------------------- * Interface diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index cc0ec5a8..cacd64b4 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -16,3 +16,7 @@ a[0,0] = 1+im a[1,1] = 1-im print a+a + +print a*3.0 + +print a*a From ed23c04f10b2174e100f1153175515a16f170ddd Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 11 Dec 2025 17:03:16 -0500 Subject: [PATCH 016/156] XMatrix mulr method --- src/xmatrix.c | 1 + test/complexmatrix.morpho | 2 ++ 2 files changed, 3 insertions(+) diff --git a/src/xmatrix.c b/src/xmatrix.c index b9d7f915..6b047a13 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -323,6 +323,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xma MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index cacd64b4..4e7fd943 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -6,6 +6,8 @@ a[0,0]=2 a[1,1]=2 print a +print 2*a + var a = ComplexMatrix(2,2) print a From bfebcb4834a23b35c6a7db1f76a51f2a11c03ffe Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 11 Dec 2025 17:40:03 -0500 Subject: [PATCH 017/156] Dimensions --- src/xcomplexmatrix.c | 15 ++++------ src/xmatrix.c | 63 ++++++++++++++++++++------------------- src/xmatrix.h | 4 +++ test/complexmatrix.morpho | 4 +++ 4 files changed, 46 insertions(+), 40 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 9c4ed277..e05af9e9 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -91,7 +91,6 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { MatrixIdx_t ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); objectcomplexmatrix *new=complexmatrix_new(nrows, ncols, true); - return morpho_wrapandbind(v, (object *) new); } @@ -124,8 +123,8 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { if (new) { MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); complexmatrix_mmul(alpha, a, b, beta, new); - out = morpho_wrapandbind(v, (object *) new); } + out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); return out; } @@ -139,20 +138,17 @@ static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { xmatrix_getelementptr(m, i, j, &el); //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); objectcomplex *new = object_newcomplex(el[0], el[1]); return morpho_wrapandbind(v, (object *) new); - return MORPHO_NIL; } value ComplexMatrix_index__int(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _getindex(v, m, i, 0); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); } value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - unsigned int j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _getindex(v, m, i, j); + unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); } /* --------- @@ -182,6 +178,7 @@ value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 6b047a13..b4274bcf 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -166,11 +166,10 @@ void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_elprintfn fn) { * ********************************************************************** */ value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { - int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); objectxmatrix *new=xmatrix_new(nrows, ncols, true); - return morpho_wrapandbind(v, (object *) new); } @@ -203,10 +202,7 @@ value XMatrix_clone(vm *v, int nargs, value *args) { value out=MORPHO_NIL; objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *new=xmatrix_clone(a); - if (new) { - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - return out; + return morpho_wrapandbind(v, (object *) new); } /* ---------- @@ -221,10 +217,8 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { if (a->ncols==b->ncols && a->nrows==b->nrows) { new=xmatrix_clone(b); - if (new) { - xmatrix_axpy(alpha, a, new); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + if (new) xmatrix_axpy(alpha, a, new); + out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); return out; @@ -246,11 +240,8 @@ value XMatrix_mul__float(vm *v, int nargs, value *args) { morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); objectxmatrix *new = xmatrix_clone(a); - if (new) { - xmatrix_scale(new, scale); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - return out; + if (new) xmatrix_scale(new, scale); + return morpho_wrapandbind(v, (object *) new); } value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { @@ -260,10 +251,8 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { if (a->ncols==b->nrows) { objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); - if (new) { - xmatrix_mmul(1.0, a, b, 0.0, new); - out = morpho_wrapandbind(v, (object *) new); - } + if (new) xmatrix_mmul(1.0, a, b, 0.0, new); + out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); return out; } @@ -280,16 +269,14 @@ static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { } value XMatrix_index__int(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _getindex(v, m, i, 0); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); } value XMatrix_index__int_int(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _getindex(v, m, i, j); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); } /* --------- @@ -304,18 +291,31 @@ value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) } value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _setindex(v, m, i, 0, MORPHO_GETARG(args, 1)); + return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); } value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _setindex(v, m, i, j, MORPHO_GETARG(args, 2)); + return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); +} + +/* --------- + * Metadata + * --------- */ + +/** Matrix dimensions */ +value XMatrix_dimensions(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + value dim[2] = { MORPHO_INTEGER(a->nrows), MORPHO_INTEGER(a->ncols) }; + objecttuple *new=object_newtuple(2, dim); + + return morpho_wrapandbind(v, (object *) new); } + MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), @@ -327,7 +327,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__floa MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.h b/src/xmatrix.h index 5ce10400..a1bb547b 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -53,12 +53,16 @@ typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, Matri #define XMATRIX_CLASSNAME "XMatrix" +#define XMATRIX_DIMENSIONS_METHOD "dimensions" + void xmatrix_initialize(void); value XMatrix_add__xmatrix(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); +value XMatrix_dimensions(vm *v, int nargs, value *args); + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index 4e7fd943..0fb40735 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -5,6 +5,7 @@ var a = XMatrix(2,2) a[0,0]=2 a[1,1]=2 print a +print a.dimensions() print 2*a @@ -22,3 +23,6 @@ print a+a print a*3.0 print a*a + +Complex b = a[0,0] +print b From 093fc6928648e0c157fd0ff3038c11fd09b46aad Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 11 Dec 2025 17:52:08 -0500 Subject: [PATCH 018/156] dimensions, count --- src/xcomplexmatrix.c | 6 ++++-- src/xmatrix.c | 9 ++++++++- src/xmatrix.h | 3 +++ test/complexmatrix.morpho | 1 + 4 files changed, 16 insertions(+), 3 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index e05af9e9..f302d69e 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -178,7 +178,7 @@ value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), @@ -186,7 +186,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMat MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.c b/src/xmatrix.c index b4274bcf..d8eeb639 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -305,6 +305,12 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { * Metadata * --------- */ +/** Number of matrix elements */ +value XMatrix_count(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + return MORPHO_INTEGER(a->ncols*a->nrows); +} + /** Matrix dimensions */ value XMatrix_dimensions(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -328,7 +334,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__in MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.h b/src/xmatrix.h index a1bb547b..1b40c2a2 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -57,11 +57,14 @@ typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, Matri void xmatrix_initialize(void); +value XMatrix_clone(vm *v, int nargs, value *args); + value XMatrix_add__xmatrix(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); value XMatrix_dimensions(vm *v, int nargs, value *args); +value XMatrix_count(vm *v, int nargs, value *args); /* ------------------------------------------------------- * Interface diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index 0fb40735..8b92ddce 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -6,6 +6,7 @@ a[0,0]=2 a[1,1]=2 print a print a.dimensions() +print a.count() print 2*a From 2cf8a61306321f472c4f4d84aa3fd0f53c505a42 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 13 Dec 2025 18:18:55 -0500 Subject: [PATCH 019/156] Inner products --- src/xcomplexmatrix.c | 31 ++++++++++++++++ src/xmatrix.c | 75 +++++++++++++++++++++++++++++++++++++++ src/xmatrix.h | 1 + test/complexmatrix.morpho | 8 +++++ 4 files changed, 115 insertions(+) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index f302d69e..346729d7 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -82,6 +82,17 @@ objectmatrixerror complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, obje return MATRIX_INCMPTBLDIM; } +/** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ +objectmatrixerror complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { + if (a->ncols==b->ncols && a->nrows==b->nrows) { + cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, + (__LAPACK_double_complex *) b->elements, 1, + (__LAPACK_double_complex *) out); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + /* ********************************************************************** * ComplexMatrix constructors * ********************************************************************** */ @@ -129,6 +140,25 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { return out; } +/* --------- + * Products + * --------- */ + +/** Frobenius inner product */ +value ComplexMatrix_inner(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + MorphoComplex prod=MCBuild(0.0, 0.0); + value out = MORPHO_NIL; + + if (complexmatrix_inner(a, b, &prod)==MATRIX_OK) { + objectcomplex *new = object_newcomplex(creal(prod), cimag(prod)); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + + return out; +} + /* --------- * index() * --------- */ @@ -187,6 +217,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMat MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/src/xmatrix.c b/src/xmatrix.c index d8eeb639..96fa38bb 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -145,6 +145,33 @@ objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *a, objectxmatrix *b, return MATRIX_INCMPTBLDIM; } +/** Finds the Frobenius inner product of two matrices */ +objectmatrixerror xmatrix_inner(objectxmatrix *a, objectxmatrix *b, double *out) { + if (a->ncols==b->ncols && a->nrows==b->nrows) { + *out=cblas_ddot((__LAPACK_int) a->nels, a->elements, 1, b->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Solve the linear system a.x = b + * @param[in|out] a lhs — overwritten by the LU decomposition + * @param[in|out] b rhs — overwritten by the solution + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ +static objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); +#else + dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); +#endif + + return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); +} + + /* ---------------------- * Display * ---------------------- */ @@ -257,6 +284,51 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { return out; } +value XMatrix_div__float(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + double scale; + morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); + scale = 1.0/scale; + if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); + + objectxmatrix *new = xmatrix_clone(a); + if (new) xmatrix_scale(new, scale); + return morpho_wrapandbind(v, (object *) new); +} + +value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + double scale; + morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); + scale = 1.0/scale; + if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); + + objectxmatrix *new = xmatrix_clone(a); + if (new) xmatrix_scale(new, scale); + return morpho_wrapandbind(v, (object *) new); +} + +/* --------- + * Products + * --------- */ + +/** Frobenius inner product */ +value XMatrix_inner(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + double prod=0.0; + + if (xmatrix_inner(a, b, &prod)!=MATRIX_OK) { + morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } + + return MORPHO_FLOAT(prod); +} + /* --------- * index() * --------- */ @@ -330,6 +402,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xma MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 1b40c2a2..c6c2cddf 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -54,6 +54,7 @@ typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, Matri #define XMATRIX_CLASSNAME "XMatrix" #define XMATRIX_DIMENSIONS_METHOD "dimensions" +#define XMATRIX_INNER_METHOD "inner" void xmatrix_initialize(void); diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index 8b92ddce..c476767c 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -8,6 +8,8 @@ print a print a.dimensions() print a.count() +print a.inner(a) + print 2*a var a = ComplexMatrix(2,2) @@ -27,3 +29,9 @@ print a*a Complex b = a[0,0] print b + +var A = ComplexMatrix(2,1) +A[0,0] = 1+im +A[1,0] = 1-im + +print A.inner(A) From f97622fa909ae7a427f5b6a539a2fe89a791fa52 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 14 Dec 2025 09:23:22 -0500 Subject: [PATCH 020/156] IdentityMatrix constructor --- src/xmatrix.c | 20 ++++++++++++++++++++ src/xmatrix.h | 2 ++ test/complexmatrix.morpho | 3 +++ 3 files changed, 25 insertions(+) diff --git a/src/xmatrix.c b/src/xmatrix.c index 96fa38bb..29064a53 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -136,6 +136,14 @@ objectmatrixerror xmatrix_scale(objectxmatrix *a, double scale) { return MATRIX_OK; } +/** Loads the identity matrix a <- I(n) */ +objectmatrixerror xmatrix_identity(objectxmatrix *a) { + if (a->ncols!=a->nrows) return MATRIX_NSQ; + memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); + for (int i=0; inrows; i++) a->elements[a->nvals*(i+a->nrows*i)]=1.0; + return MATRIX_OK; +} + /** Performs c <- alpha*(a*b) + beta*c*/ objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *a, objectxmatrix *b, double beta, objectxmatrix *c) { if (a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols) { @@ -209,6 +217,16 @@ value xmatrix_constructor__err(vm *v, int nargs, value *args) { return MORPHO_NIL; } +/** Creates an identity matrix */ +value xmatrix_identityconstructor(vm *v, int nargs, value *args) { + MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + objectxmatrix *new = xmatrix_new(n,n,false); + if (new) xmatrix_identity(new); + + return morpho_wrapandbind(v, (object *) new); +} + /* ********************************************************************** * XMatrix veneer class * ********************************************************************** */ @@ -427,5 +445,7 @@ void xmatrix_initialize(void) { morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", xmatrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + complexmatrix_initialize(); } diff --git a/src/xmatrix.h b/src/xmatrix.h index c6c2cddf..6b83a3a5 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -56,6 +56,8 @@ typedef void (*xmatrix_elprintfn) (vm *v, objectxmatrix *m, MatrixIdx_t i, Matri #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_INNER_METHOD "inner" +#define XMATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" + void xmatrix_initialize(void); value XMatrix_clone(vm *v, int nargs, value *args); diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index c476767c..7b9223bb 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -1,6 +1,9 @@ import newlinalg +var I = IdentityXMatrix(2) +print I + var a = XMatrix(2,2) a[0,0]=2 a[1,1]=2 From 1e3f59f41a3de00ebf6e9505ec8bce99bacb27e8 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 14 Dec 2025 10:27:56 -0500 Subject: [PATCH 021/156] Linear solve for regular matrix --- src/xmatrix.c | 85 +++++++++++++++++++++++++++------------ src/xmatrix.h | 7 ++++ test/complexmatrix.morpho | 18 +++++++++ 3 files changed, 85 insertions(+), 25 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index 29064a53..5de40b83 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -130,48 +130,57 @@ objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) return MATRIX_INCMPTBLDIM; } -/** Scales a matrix a <- scale * a >*/ -objectmatrixerror xmatrix_scale(objectxmatrix *a, double scale) { - cblas_dscal((__LAPACK_int) a->nels, scale, a->elements, 1); +/** Copies a matrix y <- a */ +objectmatrixerror xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { + if (x->ncols==y->ncols && x->nrows==y->nrows) { + cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Scales a matrix x <- scale * x >*/ +objectmatrixerror xmatrix_scale(objectxmatrix *x, double scale) { + cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); return MATRIX_OK; } /** Loads the identity matrix a <- I(n) */ -objectmatrixerror xmatrix_identity(objectxmatrix *a) { - if (a->ncols!=a->nrows) return MATRIX_NSQ; - memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); - for (int i=0; inrows; i++) a->elements[a->nvals*(i+a->nrows*i)]=1.0; +objectmatrixerror xmatrix_identity(objectxmatrix *x) { + if (x->ncols!=x->nrows) return MATRIX_NSQ; + memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); + for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; return MATRIX_OK; } -/** Performs c <- alpha*(a*b) + beta*c*/ -objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *a, objectxmatrix *b, double beta, objectxmatrix *c) { - if (a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols) { - cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, alpha, a->elements, a->nrows, b->elements, b->nrows, beta, c->elements, c->nrows); +/** Performs z <- alpha*(x*y) + beta*z */ +objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { + if (x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols) { + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); return MATRIX_OK; } return MATRIX_INCMPTBLDIM; } /** Finds the Frobenius inner product of two matrices */ -objectmatrixerror xmatrix_inner(objectxmatrix *a, objectxmatrix *b, double *out) { - if (a->ncols==b->ncols && a->nrows==b->nrows) { - *out=cblas_ddot((__LAPACK_int) a->nels, a->elements, 1, b->elements, 1); +objectmatrixerror xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { + if (x->ncols==y->ncols && x->nrows==y->nrows) { + *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); return MATRIX_OK; } return MATRIX_INCMPTBLDIM; } -/** Solve the linear system a.x = b +/** Solve the linear system a.x = b; * @param[in|out] a lhs — overwritten by the LU decomposition * @param[in|out] b rhs — overwritten by the solution * @param[out] pivot - you must provide an array with the same number of rows as a. * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ -static objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { +static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, x->elements, n, pivot, y->elements, n); #else dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); #endif @@ -179,6 +188,32 @@ static objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b, int * return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); } +/** Solve the linear system a.x = b using stack allocated memory for temporary */ +objectmatrixerror xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { + int pivot[a->nrows]; + double els[a->nels]; + objectxmatrix A = MORPHO_STATICXMATRIX(els, a->nrows, a->ncols); + xmatrix_copy(a, &A); + return _solve(&A, b, pivot); +} + +/** Solve the linear system a.x = b using heap allocated memory for temporary */ +objectmatrixerror xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { + int *pivot = MORPHO_MALLOC(sizeof(double)*a->nrows); + objectxmatrix *A = xmatrix_clone(a); + objectmatrixerror out = MATRIX_ALLOC; + if (pivot && A) { + out = _solve(A, b, pivot); + } + if (A) object_free((object *) A); + if (pivot) MORPHO_FREE(pivot); + return out; +} + +objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { + if (MATRIX_ISSMALL(a)) return xmatrix_solvesmall(a, b); + else return xmatrix_solvelarge(a, b); +} /* ---------------------- * Display @@ -317,17 +352,17 @@ value XMatrix_div__float(vm *v, int nargs, value *args) { } value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument value out=MORPHO_NIL; - double scale; - morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); - scale = 1.0/scale; - if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); + objectxmatrix *sol = xmatrix_clone(b); + if (sol) { + xmatrix_solve(a, sol); // TODO: Check for errors + out = morpho_wrapandbind(v, (object *) sol); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_scale(new, scale); - return morpho_wrapandbind(v, (object *) new); + return out; } /* --------- diff --git a/src/xmatrix.h b/src/xmatrix.h index 6b83a3a5..0af0870b 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -41,6 +41,13 @@ typedef struct { /** Gets the object as an matrix */ #define MORPHO_GETXMATRIX(val) ((objectxmatrix *) MORPHO_GETOBJECT(val)) +/** @brief Use to create static matrices on the C stack + @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ +#define MORPHO_STATICXMATRIX(darray, nr, nc) { .obj.type=OBJECT_XMATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } + +/** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ +#define MATRIX_ISSMALL(m) (m->nrows*m->ncols Date: Sun, 14 Dec 2025 10:33:42 -0500 Subject: [PATCH 022/156] Harmonize ComplexMatrix and XMatrix --- src/xcomplexmatrix.c | 9 +++++---- test/complexmatrix.morpho | 2 ++ 2 files changed, 7 insertions(+), 4 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 346729d7..97c48290 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -209,15 +209,16 @@ value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index c2b8fd43..5277dda8 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -18,6 +18,7 @@ print b/A print A +/* System.exit() var I = IdentityXMatrix(2) print I @@ -56,3 +57,4 @@ A[0,0] = 1+im A[1,0] = 1-im print A.inner(A) +*/ \ No newline at end of file From fe58a94d8f0c67bd7ac2cebc64f67bbaa7376131 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 14 Dec 2025 12:30:52 -0500 Subject: [PATCH 023/156] Towards linear solve for complex matrices --- src/xcomplexmatrix.c | 19 +++++++++++++++++++ src/xmatrix.c | 12 ++++++++---- src/xmatrix.h | 2 ++ 3 files changed, 29 insertions(+), 4 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 97c48290..b69efbb9 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -93,6 +93,24 @@ objectmatrixerror complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatri return MATRIX_INCMPTBLDIM; } +/** Low level solve for linear system a.x = b + * @param[in|out] a - lhs; overwritten by LU decomposition + * @param[in|out] b - rhs; overwritten by solution + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns a matrix error code */ +static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); +#else + zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, + &n, pivot, (__LAPACK_double_complex *) b->elements, n, &info); +#endif + + return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); +} + /* ********************************************************************** * ComplexMatrix constructors * ********************************************************************** */ @@ -214,6 +232,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMat MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 5de40b83..82eac3e9 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -171,11 +171,11 @@ objectmatrixerror xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) return MATRIX_INCMPTBLDIM; } -/** Solve the linear system a.x = b; - * @param[in|out] a lhs — overwritten by the LU decomposition - * @param[in|out] b rhs — overwritten by the solution +/** Low level solve for linear system a.x = b + * @param[in|out] a - lhs; overwritten by LU decomposition + * @param[in|out] b - rhs; overwritten by solution * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ + * @returns a matrix error code */ static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -210,6 +210,10 @@ objectmatrixerror xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { return out; } +/** Solve the linear system a.x = b; automatrically allocates storage depending on size of the matrix + * @param[in] a lhs + * @param[in|out] b rhs — overwritten by the solution + * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { if (MATRIX_ISSMALL(a)) return xmatrix_solvesmall(a, b); else return xmatrix_solvelarge(a, b); diff --git a/src/xmatrix.h b/src/xmatrix.h index 0af0870b..46589813 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -72,6 +72,8 @@ value XMatrix_clone(vm *v, int nargs, value *args); value XMatrix_add__xmatrix(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); +value XMatrix_div__float(vm *v, int nargs, value *args); +value XMatrix_div__xmatrix(vm *v, int nargs, value *args); value XMatrix_dimensions(vm *v, int nargs, value *args); value XMatrix_count(vm *v, int nargs, value *args); From e37b5cb9c44f903ce70cd6cb2e0e01dd250c2336 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 14 Dec 2025 13:55:59 -0500 Subject: [PATCH 024/156] Matrix type interfaces and generic solve --- src/newlinalg.c | 3 +++ src/xcomplexmatrix.c | 26 ++++++++++++------------- src/xmatrix.c | 41 ++++++++++++++++++++++++++++++++++----- src/xmatrix.h | 22 ++++++++++++++++++--- test/complexmatrix.morpho | 19 ++++++++++++++---- 5 files changed, 86 insertions(+), 25 deletions(-) diff --git a/src/newlinalg.c b/src/newlinalg.c index d8190686..752a376c 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -4,6 +4,9 @@ * @brief New linear algebra library */ +#define ACCELERATE_NEW_LAPACK +#define MORPHO_INCLUDE_LINALG + #include "newlinalg.h" /* ------------------------------------------------------- diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index b69efbb9..00b42553 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -105,12 +105,21 @@ static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); #else zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, - &n, pivot, (__LAPACK_double_complex *) b->elements, n, &info); + &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); #endif return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); } +/* ********************************************************************** + * Interface definition + * ********************************************************************** */ + +matrixinterfacedefn complexmatrixdefn = { + .printelfn = _printelfn, + .solvefn = _solve +}; + /* ********************************************************************** * ComplexMatrix constructors * ********************************************************************** */ @@ -127,17 +136,6 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { * ComplexMatrix veneer class * ********************************************************************** */ -/* ---------------------- - * Common utility methods - * ---------------------- */ - -/** Prints a matrix */ -value ComplexMatrix_print(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - xmatrix_print(v, m, _printelfn); - return MORPHO_NIL; -} - /* ---------------------- * Arithmetic * ---------------------- */ @@ -225,7 +223,7 @@ value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { } MORPHO_BEGINCLASS(ComplexMatrix) -MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", ComplexMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), @@ -233,6 +231,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul_ MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), @@ -248,6 +247,7 @@ MORPHO_ENDCLASS void complexmatrix_initialize(void) { objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); + xmatrix_addinterface(&complexmatrixdefn); value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), MORPHO_NIL); object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); diff --git a/src/xmatrix.c b/src/xmatrix.c index 82eac3e9..1ebfcea5 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -11,6 +11,26 @@ #include "xmatrix.h" #include "xcomplexmatrix.h" +/* ********************************************************************** + * Matrix interface definitions + * ********************************************************************** */ + +/** Hold the matrix interface definitions as they're created */ +static matrixinterfacedefn _matrixdefn[LINALG_MAXMATRIXDEFNS]; +objecttype matrixinterfacedefnnext=0; /** Type of the next object definition */ + +void xmatrix_addinterface(matrixinterfacedefn *defn) { + if (matrixinterfacedefnnextobj.type-OBJECT_XMATRIX; + if (iindxnels]; objectxmatrix A = MORPHO_STATICXMATRIX(els, a->nrows, a->ncols); xmatrix_copy(a, &A); - return _solve(&A, b, pivot); + return (xmatrix_getinterface(a)->solvefn) (&A, b, pivot); } /** Solve the linear system a.x = b using heap allocated memory for temporary */ objectmatrixerror xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { - int *pivot = MORPHO_MALLOC(sizeof(double)*a->nrows); + int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); objectxmatrix *A = xmatrix_clone(a); objectmatrixerror out = MATRIX_ALLOC; if (pivot && A) { - out = _solve(A, b, pivot); + out = (xmatrix_getinterface(a)->solvefn) (A, b, pivot); } if (A) object_free((object *) A); if (pivot) MORPHO_FREE(pivot); @@ -224,7 +244,7 @@ objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { * ---------------------- */ /** Prints a matrix */ -void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_elprintfn fn) { +void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_printelfn_t fn) { for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k @@ -235,6 +255,15 @@ void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_elprintfn fn) { } } +/* ********************************************************************** + * Interface definition + * ********************************************************************** */ + +matrixinterfacedefn xmatrixdefn = { + .printelfn = _printelfn, + .solvefn = _solve +}; + /* ********************************************************************** * XMatrix constructors * ********************************************************************** */ @@ -277,7 +306,8 @@ value xmatrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value XMatrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - xmatrix_print(v, m, _printelfn); + matrixinterfacedefn *interface=xmatrix_getinterface(m); + xmatrix_print(v, m, interface->printelfn); return MORPHO_NIL; } @@ -476,6 +506,7 @@ MORPHO_ENDCLASS void xmatrix_initialize(void) { objectxmatrixtype=object_addtype(&objectxmatrixdefn); + xmatrix_addinterface(&xmatrixdefn); value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), MORPHO_NIL); object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); diff --git a/src/xmatrix.h b/src/xmatrix.h index 46589813..6d84a07c 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -7,6 +7,8 @@ #ifndef xmatrix_h #define xmatrix_h +#define LINALG_MAXMATRIXDEFNS 4 + /* ------------------------------------------------------- * Matrix object type * ------------------------------------------------------- */ @@ -48,11 +50,24 @@ typedef struct { /** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ #define MATRIX_ISSMALL(m) (m->nrows*m->ncols Date: Sun, 14 Dec 2025 22:33:32 -0500 Subject: [PATCH 025/156] reshape --- src/xcomplexmatrix.c | 1 + src/xmatrix.c | 16 ++++++++++++++++ src/xmatrix.h | 2 ++ test/complexmatrix.morpho | 7 +++++-- 4 files changed, 24 insertions(+), 2 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 00b42553..b067f677 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -237,6 +237,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_i MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/src/xmatrix.c b/src/xmatrix.c index 1ebfcea5..aec0354b 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -29,6 +29,7 @@ void xmatrix_addinterface(matrixinterfacedefn *defn) { matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a) { int iindx = a->obj.type-OBJECT_XMATRIX; if (iindxnrows*a->ncols) { + a->nrows=nrows; + a->ncols=ncols; + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + + return MORPHO_NIL; +} + /** Number of matrix elements */ value XMatrix_count(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -496,6 +511,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__in MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/src/xmatrix.h b/src/xmatrix.h index 6d84a07c..01448da1 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -77,6 +77,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_INNER_METHOD "inner" +#define XMATRIX_RESHAPE_METHOD "reshape" #define XMATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" @@ -91,6 +92,7 @@ value XMatrix_mul__float(vm *v, int nargs, value *args); value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); +value XMatrix_reshape(vm *v, int nargs, value *args); value XMatrix_dimensions(vm *v, int nargs, value *args); value XMatrix_count(vm *v, int nargs, value *args); diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho index ce1db94b..8e67b71d 100644 --- a/test/complexmatrix.morpho +++ b/test/complexmatrix.morpho @@ -6,6 +6,11 @@ A[0,0] = 1+im A[1,1] = 1-im print A +A.reshape(4,1) +print A + +System.exit() + var b = ComplexMatrix(2,1) b[0,0] = Complex(0.5,0) b[1,0] = Complex(-0.5,0) @@ -13,8 +18,6 @@ print b print b/A -System.exit() - var A = XMatrix(2,2) A[0,0]=1 A[0,1]=2 From 1f109bbcba3d05d77c629fb1fe23537ee53eea66 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 18 Dec 2025 21:22:31 -0500 Subject: [PATCH 026/156] Added in provisional norms --- src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 71 +++++++++++++++++++++++++++++++++++++++ src/xmatrix.h | 1 + test/complexmatrix.morpho | 15 +++++++++ 4 files changed, 88 insertions(+), 1 deletion(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index b067f677..b201e5b0 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -12,7 +12,7 @@ #include "newlinalg.h" #include "xmatrix.h" #include "xcomplexmatrix.h" - +` objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype diff --git a/src/xmatrix.c b/src/xmatrix.c index aec0354b..b8162d79 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -183,6 +183,45 @@ objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, return MATRIX_INCMPTBLDIM; } +/* ---------------------- + * Unary operations + * ---------------------- */ + +// TODO: Fix with correct norms! + +/** Computes the Frobenius norm of a matrix */ +double xmatrix_norm(objectxmatrix *a) { + return cblas_dnrm2((__LAPACK_int) a->nels, a->elements, 1); +} + +/** Computes the L1 norm of a matrix */ +double xmatrix_l1norm(objectxmatrix *a) { + return cblas_dasum((__LAPACK_int) a->nels, a->elements, 1); +} + +/** Computes the Ln norm of a matrix */ +double xmatrix_lnnorm(objectxmatrix *a, double n) { + double sum=0.0, c=0.0, y,t; + + for (MatrixCount_t i=0; inels; i++) { + y=pow(a->elements[i],n)-c; // Kahan summation + t=sum+y; + c=(t-sum)-y; + sum=t; + } + return pow(sum,1.0/n); +} + +/** Computes the infinity norm of a matrix */ +double xmatrix_linfnorm(objectxmatrix *a) { + int imax=cblas_idamax((__LAPACK_int) a->nels, a->elements, 1); + return a->elements[imax]; +} + +/* ---------------------- + * Products + * ---------------------- */ + /** Finds the Frobenius inner product of two matrices */ objectmatrixerror xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { if (x->ncols==y->ncols && x->nrows==y->nrows) { @@ -400,6 +439,36 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { return out; } +/* ---------------- + * Unary operations + * ---------------- */ + +/** Matrix norm */ +value XMatrix_norm__x(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out = MORPHO_NIL; + double n; + + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { + if (fabs(n-1.0) Date: Fri, 19 Dec 2025 07:42:04 -0500 Subject: [PATCH 027/156] Error return system --- src/newlinalg.c | 20 ++++++++++ src/newlinalg.h | 29 ++++++++++++++ src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 44 ++++++++++----------- test/constructors/matrix_constructor.morpho | 10 +++++ test/constructors/vector_constructor.morpho | 10 +++++ test/index/matrix_getcolumn.morpho | 17 ++++++++ test/index/matrix_getindex.morpho | 21 ++++++++++ test/index/matrix_setindex.morpho | 13 ++++++ 9 files changed, 141 insertions(+), 25 deletions(-) create mode 100644 test/constructors/matrix_constructor.morpho create mode 100644 test/constructors/vector_constructor.morpho create mode 100644 test/index/matrix_getcolumn.morpho create mode 100644 test/index/matrix_getindex.morpho create mode 100644 test/index/matrix_setindex.morpho diff --git a/src/newlinalg.c b/src/newlinalg.c index 752a376c..fd16dad2 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -9,12 +9,32 @@ #include "newlinalg.h" +/* ------------------------------------------------------- + * Errors + * ------------------------------------------------------- */ + +void linalg_raiseerror(vm *v, linalgError_t err) { + switch (err) { + case LINALGERR_OK: break; + case LINALGERR_INCOMPATIBLE_DIM: morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); break; + case LINALGERR_INDX_OUT_OF_BNDS: morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); break; + case LINALGERR_MATRIX_SINGULAR: morpho_runtimeerror(v, LINALG_SINGULAR); break; + case LINALGERR_NOT_SQUARE: morpho_runtimeerror(v, LINALG_NOTSQ); break; + case LINALGERR_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; + } +} + /* ------------------------------------------------------- * Initialization and finalization * ------------------------------------------------------- */ void newlinalg_initialize(void) { xmatrix_initialize(); + + morpho_defineerror(LINALG_INCOMPATIBLEMATRICES, ERROR_HALT, LINALG_INCOMPATIBLEMATRICES_MSG); + morpho_defineerror(LINALG_INDICESOUTSIDEBOUNDS, ERROR_HALT, LINALG_INDICESOUTSIDEBOUNDS_MSG); + morpho_defineerror(LINALG_SINGULAR, ERROR_HALT, LINALG_SINGULAR_MSG); + morpho_defineerror(LINALG_NOTSQ, ERROR_HALT, LINALG_NOTSQ_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index 43a0220a..a4f88700 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -13,4 +13,33 @@ #include "xmatrix.h" +/* ------------------------------------------------------- + * objectmatrixerror type + * ------------------------------------------------------- */ + +typedef enum { + LINALGERR_OK, // Operation performed correctly + LINALGERR_INCOMPATIBLE_DIM, // Matrices have incompatible dimensions, e.g. for multiplication + LINALGERR_INDX_OUT_OF_BNDS, // Index out of bounds, e.g. for access. + LINALGERR_MATRIX_SINGULAR, // Matrix is singular + LINALGERR_NOT_SQUARE, // Matrix is required to be square for this algorithm + LINALGERR_ALLOC // Memory allocation failed +} linalgError_t; + +/* ------------------------------------------------------- + * Errors + * ------------------------------------------------------- */ + +#define LINALG_INCOMPATIBLEMATRICES "LnAlgMtrxIncmptbl" +#define LINALG_INCOMPATIBLEMATRICES_MSG "Matrices have incompatible shape." + +#define LINALG_INDICESOUTSIDEBOUNDS "LnAlgMtrxIndxBnds" +#define LINALG_INDICESOUTSIDEBOUNDS_MSG "Matrix index out of bounds." + +#define LINALG_SINGULAR "LnAlgMtrxSnglr" +#define LINALG_SINGULAR_MSG "Matrix is singular." + +#define LINALG_NOTSQ "LnAlgMtrxNtSq" +#define LINALG_NOTSQ_MSG "Matrix is not square." + #endif diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index b201e5b0..b067f677 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -12,7 +12,7 @@ #include "newlinalg.h" #include "xmatrix.h" #include "xcomplexmatrix.h" -` + objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype diff --git a/src/xmatrix.c b/src/xmatrix.c index b8162d79..d6778dfd 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -143,51 +143,47 @@ bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t c * ---------------------- */ /** Vector addition: Performs y <- alpha*x + y */ -objectmatrixerror xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { - if (x->ncols==y->ncols && x->nrows==y->nrows) { - cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); + return LINALGERR_OK; } /** Copies a matrix y <- a */ -objectmatrixerror xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { - if (x->ncols==y->ncols && x->nrows==y->nrows) { - cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + return LINALGERR_OK; } /** Scales a matrix x <- scale * x >*/ -objectmatrixerror xmatrix_scale(objectxmatrix *x, double scale) { +void xmatrix_scale(objectxmatrix *x, double scale) { cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); - return MATRIX_OK; } /** Loads the identity matrix a <- I(n) */ -objectmatrixerror xmatrix_identity(objectxmatrix *x) { - if (x->ncols!=x->nrows) return MATRIX_NSQ; +linalgError_t xmatrix_identity(objectxmatrix *x) { + if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; - return MATRIX_OK; + return LINALGERR_OK; } /** Performs z <- alpha*(x*y) + beta*z */ -objectmatrixerror xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { - if (x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols) { - cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { + if (!(x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); + return LINALGERR_OK; } /* ---------------------- * Unary operations * ---------------------- */ -// TODO: Fix with correct norms! +// TODO: Fix with correct norms! /** Computes the Frobenius norm of a matrix */ double xmatrix_norm(objectxmatrix *a) { diff --git a/test/constructors/matrix_constructor.morpho b/test/constructors/matrix_constructor.morpho new file mode 100644 index 00000000..d85f095d --- /dev/null +++ b/test/constructors/matrix_constructor.morpho @@ -0,0 +1,10 @@ +// Create a Matrix + +import newlinalg + +var A = XMatrix(2,2) + +print A +// expect: [ 0 0 ] +// expect: [ 0 0 ] + diff --git a/test/constructors/vector_constructor.morpho b/test/constructors/vector_constructor.morpho new file mode 100644 index 00000000..3a508fb9 --- /dev/null +++ b/test/constructors/vector_constructor.morpho @@ -0,0 +1,10 @@ +// Create a column vector + +import newlinalg + +var A = Matrix(2) + +print A +// expect: [ 0 ] +// expect: [ 0 ] + diff --git a/test/index/matrix_getcolumn.morpho b/test/index/matrix_getcolumn.morpho new file mode 100644 index 00000000..ab92c5d3 --- /dev/null +++ b/test/index/matrix_getcolumn.morpho @@ -0,0 +1,17 @@ +// Set elements of a Matrix + +import newlinalg + +var A = XMatrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +print A.column(0) +// expect: [ 1 ] +// expect: [ 3 ] + +print A.column(1) +// expect: [ 2 ] +// expect: [ 4 ] diff --git a/test/index/matrix_getindex.morpho b/test/index/matrix_getindex.morpho new file mode 100644 index 00000000..7d8c16b8 --- /dev/null +++ b/test/index/matrix_getindex.morpho @@ -0,0 +1,21 @@ +// Get elements of a Matrix + +import newlinalg + +var A = XMatrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +// Array-like access +print A[0,0] // expect: 1 +print A[0,1] // expect: 2 +print A[1,0] // expect: 3 +print A[1,1] // expect: 4 + +// Vector-like access +print A[0] // expect: 1 +print A[1] // expect: 2 +print A[2] // expect: 3 +print A[3] // expect: 4 \ No newline at end of file diff --git a/test/index/matrix_setindex.morpho b/test/index/matrix_setindex.morpho new file mode 100644 index 00000000..af43f9c7 --- /dev/null +++ b/test/index/matrix_setindex.morpho @@ -0,0 +1,13 @@ +// Set elements of a Matrix + +import newlinalg + +var A = XMatrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] From 4a665427ee0b349f2da9ac763096c156066497f4 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 19 Dec 2025 07:54:16 -0500 Subject: [PATCH 028/156] Functions use new error API --- src/newlinalg.c | 2 ++ src/newlinalg.h | 13 +++++++++++-- src/xcomplexmatrix.c | 4 ++-- src/xcomplexmatrix.h | 2 -- src/xmatrix.c | 23 ++++++++++------------- src/xmatrix.h | 2 +- 6 files changed, 26 insertions(+), 20 deletions(-) diff --git a/src/newlinalg.c b/src/newlinalg.c index fd16dad2..749c0005 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -20,6 +20,7 @@ void linalg_raiseerror(vm *v, linalgError_t err) { case LINALGERR_INDX_OUT_OF_BNDS: morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); break; case LINALGERR_MATRIX_SINGULAR: morpho_runtimeerror(v, LINALG_SINGULAR); break; case LINALGERR_NOT_SQUARE: morpho_runtimeerror(v, LINALG_NOTSQ); break; + case LINALGERR_LAPACK_INVLD_ARGS: morpho_runtimeerror(v, LINALG_LAPACK_ARGS); break; case LINALGERR_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; } } @@ -35,6 +36,7 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_INDICESOUTSIDEBOUNDS, ERROR_HALT, LINALG_INDICESOUTSIDEBOUNDS_MSG); morpho_defineerror(LINALG_SINGULAR, ERROR_HALT, LINALG_SINGULAR_MSG); morpho_defineerror(LINALG_NOTSQ, ERROR_HALT, LINALG_NOTSQ_MSG); + morpho_defineerror(LINALG_LAPACK_ARGS, ERROR_HALT, LINALG_LAPACK_ARGS_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index a4f88700..319eb3b2 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -11,8 +11,6 @@ #include #include -#include "xmatrix.h" - /* ------------------------------------------------------- * objectmatrixerror type * ------------------------------------------------------- */ @@ -23,6 +21,7 @@ typedef enum { LINALGERR_INDX_OUT_OF_BNDS, // Index out of bounds, e.g. for access. LINALGERR_MATRIX_SINGULAR, // Matrix is singular LINALGERR_NOT_SQUARE, // Matrix is required to be square for this algorithm + LINALGERR_LAPACK_INVLD_ARGS, // Invalid arguments to LAPACK routine LINALGERR_ALLOC // Memory allocation failed } linalgError_t; @@ -42,4 +41,14 @@ typedef enum { #define LINALG_NOTSQ "LnAlgMtrxNtSq" #define LINALG_NOTSQ_MSG "Matrix is not square." +#define LINALG_LAPACK_ARGS "LnAlgLapackArgs" +#define LINALG_LAPACK_ARGS_MSG "Lapack function called with invalid arguments." + +/* ------------------------------------------------------- + * Include the rest of the library + * ------------------------------------------------------- */ + +#include "xmatrix.h" +#include "xcomplexmatrix.h" + #endif diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index b067f677..536df986 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -98,7 +98,7 @@ objectmatrixerror complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatri * @param[in|out] b - rhs; overwritten by solution * @param[out] pivot - you must provide an array with the same number of rows as a. * @returns a matrix error code */ -static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { +static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -108,7 +108,7 @@ static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); #endif - return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } /* ********************************************************************** diff --git a/src/xcomplexmatrix.h b/src/xcomplexmatrix.h index 71d50ee2..4331a06a 100644 --- a/src/xcomplexmatrix.h +++ b/src/xcomplexmatrix.h @@ -7,8 +7,6 @@ #ifndef xcomplexmatrix_h #define xcomplexmatrix_h -#include "newlinalg.h" - /* ------------------------------------------------------- * ComplexMatrix veneer class * ------------------------------------------------------- */ diff --git a/src/xmatrix.c b/src/xmatrix.c index d6778dfd..13198b3c 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -8,8 +8,6 @@ #define MORPHO_INCLUDE_LINALG #include "newlinalg.h" -#include "xmatrix.h" -#include "xcomplexmatrix.h" /* ********************************************************************** * Matrix interface definitions @@ -219,12 +217,11 @@ double xmatrix_linfnorm(objectxmatrix *a) { * ---------------------- */ /** Finds the Frobenius inner product of two matrices */ -objectmatrixerror xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { - if (x->ncols==y->ncols && x->nrows==y->nrows) { - *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + return LINALGERR_OK; } /** Low level solve for linear system a.x = b @@ -232,7 +229,7 @@ objectmatrixerror xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) * @param[in|out] b - rhs; overwritten by solution * @param[out] pivot - you must provide an array with the same number of rows as a. * @returns a matrix error code */ -static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { +static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -241,11 +238,11 @@ static objectmatrixerror _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); #endif - return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } /** Solve the linear system a.x = b using stack allocated memory for temporary */ -objectmatrixerror xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { +linalgError_t xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { int pivot[a->nrows]; double els[a->nels]; objectxmatrix A = MORPHO_STATICXMATRIX(els, a->nrows, a->ncols); @@ -254,7 +251,7 @@ objectmatrixerror xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { } /** Solve the linear system a.x = b using heap allocated memory for temporary */ -objectmatrixerror xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { +linalgError_t xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); objectxmatrix *A = xmatrix_clone(a); objectmatrixerror out = MATRIX_ALLOC; @@ -270,7 +267,7 @@ objectmatrixerror xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { * @param[in] a lhs * @param[in|out] b rhs — overwritten by the solution * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ -objectmatrixerror xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { +linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { if (MATRIX_ISSMALL(a)) return xmatrix_solvesmall(a, b); else return xmatrix_solvelarge(a, b); } diff --git a/src/xmatrix.h b/src/xmatrix.h index 3c33a818..e1ca7b4b 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -59,7 +59,7 @@ typedef struct { typedef void (*xmatrix_printelfn_t) (vm *, objectxmatrix *, MatrixIdx_t, MatrixIdx_t); /** Function that solves a linear system */ -typedef objectmatrixerror (*xmatrix_solvefn_t) (objectxmatrix *, objectxmatrix *, int *); +typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *, objectxmatrix *, int *); typedef struct { xmatrix_printelfn_t printelfn; From e8b55d53e3163c6f00b4fd8cd0fb439d6be84651 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 19 Dec 2025 08:28:56 -0500 Subject: [PATCH 029/156] Improve error checking and reporting --- src/newlinalg.h | 11 +++++++++++ src/xcomplexmatrix.c | 6 +++--- src/xmatrix.c | 34 ++++++++++++++++------------------ src/xmatrix.h | 2 +- 4 files changed, 31 insertions(+), 22 deletions(-) diff --git a/src/newlinalg.h b/src/newlinalg.h index 319eb3b2..c2826ce5 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -44,6 +44,17 @@ typedef enum { #define LINALG_LAPACK_ARGS "LnAlgLapackArgs" #define LINALG_LAPACK_ARGS_MSG "Lapack function called with invalid arguments." +/* ------------------------------------------------------- + * Interface + * ------------------------------------------------------- */ + +void linalg_raiseerror(vm *v, linalgError_t err); + +/** Macro to simplify error checking: + - evaluates expression f that returns linalgError_t; + - if an error occurred, raises the corresponding error in a vm called v */ +#define LINALG_ERRCHECKVM(f) { linalgError_t err = f; if (err!=LINALGERR_OK) linalg_raiseerror(v, err); } + /* ------------------------------------------------------- * Include the rest of the library * ------------------------------------------------------- */ diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 536df986..f5bfc148 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -170,7 +170,7 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { if (complexmatrix_inner(a, b, &prod)==MATRIX_OK) { objectcomplex *new = object_newcomplex(creal(prod), cimag(prod)); out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } @@ -181,7 +181,7 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { double *el; - xmatrix_getelementptr(m, i, j, &el); //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); + if (!xmatrix_getelementptr(m, i, j, &el)) morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); objectcomplex *new = object_newcomplex(el[0], el[1]); return morpho_wrapandbind(v, (object *) new); } @@ -204,7 +204,7 @@ value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { static value _setindex(vm *v, objectcomplexmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { if (MORPHO_ISCOMPLEX(in) && !complexmatrix_setelement(m, i, j, MORPHO_GETCOMPLEX(in)->Z)) { - // Should raise an error + // TODO: Raise error } return MORPHO_NIL; } diff --git a/src/xmatrix.c b/src/xmatrix.c index 13198b3c..4b2f3b42 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -277,11 +277,12 @@ linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { * ---------------------- */ /** Prints a matrix */ -void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_printelfn_t fn) { +void xmatrix_print(vm *v, objectxmatrix *m) { + matrixinterfacedefn *interface=xmatrix_getinterface(m); for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - (*fn) (v, m, i, j); + (*interface->printelfn) (v, m, i, j); morpho_printf(v, " "); } morpho_printf(v, "]%s", (inrows-1 ? "\n" : "")); @@ -339,8 +340,7 @@ value xmatrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value XMatrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - matrixinterfacedefn *interface=xmatrix_getinterface(m); - xmatrix_print(v, m, interface->printelfn); + xmatrix_print(v, m); return MORPHO_NIL; } @@ -364,9 +364,9 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { if (a->ncols==b->ncols && a->nrows==b->nrows) { new=xmatrix_clone(b); - if (new) xmatrix_axpy(alpha, a, new); + if (new) xmatrix_axpy(alpha, a, new); // TODO: Error check out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } @@ -400,7 +400,7 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); if (new) xmatrix_mmul(1.0, a, b, 0.0, new); out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } @@ -425,7 +425,7 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *sol = xmatrix_clone(b); if (sol) { - xmatrix_solve(a, sol); // TODO: Check for errors + xmatrix_solve(a, sol); // TODO: Error check out = morpho_wrapandbind(v, (object *) sol); } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); @@ -472,9 +472,7 @@ value XMatrix_inner(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); double prod=0.0; - if (xmatrix_inner(a, b, &prod)!=MATRIX_OK) { - morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } + LINALG_ERRCHECKVM(xmatrix_inner(a, b, &prod)); return MORPHO_FLOAT(prod); } @@ -484,10 +482,10 @@ value XMatrix_inner(vm *v, int nargs, value *args) { * --------- */ static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { - double out; - if (xmatrix_getelement(m, i, j, &out)) return MORPHO_FLOAT(out); - //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); - return MORPHO_NIL; + double out=0.0; + + LINALG_ERRCHECKVM(xmatrix_getelement(m, i, j, &out)); + return MORPHO_FLOAT(out); } value XMatrix_index__int(vm *v, int nargs, value *args) { @@ -507,8 +505,8 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { double val=0.0; - if (!morpho_valuetofloat(in, &val)) true; // Should raise an error (Matrix doesn't!) - if (!xmatrix_setelement(m, i, j, val)) true; //morpho_runtimeerror(v, XMATRIX_INDICESOUTSIDEBOUNDS); + if (!morpho_valuetofloat(in, &val)) true; // TODO: Should raise an error (Matrix doesn't!) + if (!xmatrix_setelement(m, i, j, val)) morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); return MORPHO_NIL; } @@ -536,7 +534,7 @@ value XMatrix_reshape(vm *v, int nargs, value *args) { if (nrows*ncols==a->nrows*a->ncols) { a->nrows=nrows; a->ncols=ncols; - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } diff --git a/src/xmatrix.h b/src/xmatrix.h index e1ca7b4b..2a101226 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -107,6 +107,6 @@ bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); -void xmatrix_print(vm *v, objectxmatrix *m, xmatrix_printelfn_t fn); +void xmatrix_print(vm *v, objectxmatrix *m); #endif From b17715ea4b9997b12473d71dec0c787cafb0d658 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 12:08:14 -0500 Subject: [PATCH 030/156] getcolumn --- src/xmatrix.c | 39 ++++++++++++++++++++++++++++++ src/xmatrix.h | 2 ++ test/index/matrix_getcolumn.morpho | 2 ++ 3 files changed, 43 insertions(+) diff --git a/src/xmatrix.c b/src/xmatrix.c index 4b2f3b42..98bc0ddd 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -136,6 +136,20 @@ bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t c return true; } +/** Copies the column col of matrix a into the column vector b */ +bool xmatrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { + if (b->nels!=a->nrows*a->nvals) return false; + + cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col*a->nrows, 1, b->elements, 1); +} + +/** Copies the column vector b into column col of matrix a */ +bool xmatrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { + if (b->nels!=a->nrows*a->nvals) return false; + + cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col*a->nrows, 1); +} + /* ---------------------- * Arithmetic operations * ---------------------- */ @@ -521,6 +535,29 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); } +/* --------- + * column + * --------- */ + +value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (i>=0 && incols) { + objectxmatrix *new=xmatrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); + if (new) xmatrix_getcolumn(a, i, new); + out=morpho_wrapandbind(v, (object *)new); + } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); + + return out; +} + +value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { + + return MORPHO_NIL; +} + /* --------- * Metadata * --------- */ @@ -571,6 +608,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__in MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "(_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "()", XMatrix_norm, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 2a101226..8eb1131f 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -75,6 +75,8 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_CLASSNAME "XMatrix" +#define XMATRIX_GETCOLUMN_METHOD "column" +#define XMATRIX_SETCOLUMN_METHOD "setcolumn" #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_NORM_METHOD "norm" diff --git a/test/index/matrix_getcolumn.morpho b/test/index/matrix_getcolumn.morpho index ab92c5d3..926f15db 100644 --- a/test/index/matrix_getcolumn.morpho +++ b/test/index/matrix_getcolumn.morpho @@ -15,3 +15,5 @@ print A.column(0) print A.column(1) // expect: [ 2 ] // expect: [ 4 ] + +print A.column(2) // expect error 'LnAlgMtrxIndxBnds' \ No newline at end of file From 7e729c6a709a3d88fe21ec458a66c90227777ccc Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 12:36:53 -0500 Subject: [PATCH 031/156] Getcolumn/Setcolumn --- src/xcomplexmatrix.c | 21 +++++++------ src/xmatrix.c | 38 +++++++++++++---------- src/xmatrix.h | 11 ++++--- test/index/complexmatrix_getcolumn.morpho | 19 ++++++++++++ test/index/complexmatrix_setcolumn.morpho | 22 +++++++++++++ test/index/matrix_getcolumn.morpho | 2 +- test/index/matrix_setcolumn.morpho | 22 +++++++++++++ 7 files changed, 104 insertions(+), 31 deletions(-) create mode 100644 test/index/complexmatrix_getcolumn.morpho create mode 100644 test/index/complexmatrix_setcolumn.morpho create mode 100644 test/index/matrix_setcolumn.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index f5bfc148..197f75d2 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -47,22 +47,22 @@ objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, boo * ---------------------- */ /** Sets a matrix element. */ -bool complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { - if (!(colncols && rownrows)) return false; +linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); matrix->elements[ix]=creal(value); matrix->elements[ix+1]=cimag(value); - return true; + return LINALGERR_OK; } /** Gets a matrix element */ -bool complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { - if (!(colncols && rownrows)) return false; +linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; MatrixCount_t ix = 2*(col*matrix->nrows+row); if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); - return true; + return LINALGERR_OK; } /* ---------------------- @@ -181,7 +181,7 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { double *el; - if (!xmatrix_getelementptr(m, i, j, &el)) morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); + LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &el)); objectcomplex *new = object_newcomplex(el[0], el[1]); return morpho_wrapandbind(v, (object *) new); } @@ -202,9 +202,8 @@ value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { * --------- */ static value _setindex(vm *v, objectcomplexmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { - if (MORPHO_ISCOMPLEX(in) && - !complexmatrix_setelement(m, i, j, MORPHO_GETCOMPLEX(in)->Z)) { - // TODO: Raise error + if (MORPHO_ISCOMPLEX(in)) { + LINALG_ERRCHECKVM(complexmatrix_setelement(m, i, j, MORPHO_GETCOMPLEX(in)->Z)); } return MORPHO_NIL; } @@ -237,6 +236,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_i MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) diff --git a/src/xmatrix.c b/src/xmatrix.c index 98bc0ddd..2babee7b 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -111,43 +111,47 @@ objectxmatrix *xmatrix_clone(objectxmatrix *in) { /** @brief Sets a matrix element. @returns true if the element is in the range of the matrix, false otherwise */ -bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { - if (!(colncols && rownrows)) return false; +linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; - return true; + return LINALGERR_OK; } /** @brief Gets a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { - if (!(colncols && rownrows)) return false; +linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; - return true; + return LINALGERR_OK; } /** @brief Gets a pointer to a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { - if (!(colncols && rownrows)) return false; +linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); - return true; + return LINALGERR_OK; } /** Copies the column col of matrix a into the column vector b */ -bool xmatrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { - if (b->nels!=a->nrows*a->nvals) return false; +linalgError_t xmatrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col*a->nrows, 1, b->elements, 1); + return LINALGERR_OK; } /** Copies the column vector b into column col of matrix a */ -bool xmatrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { - if (b->nels!=a->nrows*a->nvals) return false; +linalgError_t xmatrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col*a->nrows, 1); + return LINALGERR_OK; } /* ---------------------- @@ -268,7 +272,7 @@ linalgError_t xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { linalgError_t xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); objectxmatrix *A = xmatrix_clone(a); - objectmatrixerror out = MATRIX_ALLOC; + linalgError_t out = LINALGERR_ALLOC; if (pivot && A) { out = (xmatrix_getinterface(a)->solvefn) (A, b, pivot); } @@ -520,7 +524,7 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { double val=0.0; if (!morpho_valuetofloat(in, &val)) true; // TODO: Should raise an error (Matrix doesn't!) - if (!xmatrix_setelement(m, i, j, val)) morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); + LINALG_ERRCHECKVM(xmatrix_setelement(m, i, j, val)); return MORPHO_NIL; } @@ -554,7 +558,9 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { } value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { - + LINALG_ERRCHECKVM(xmatrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); return MORPHO_NIL; } diff --git a/src/xmatrix.h b/src/xmatrix.h index 8eb1131f..64aa1458 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -76,7 +76,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_CLASSNAME "XMatrix" #define XMATRIX_GETCOLUMN_METHOD "column" -#define XMATRIX_SETCOLUMN_METHOD "setcolumn" +#define XMATRIX_SETCOLUMN_METHOD "setColumn" #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_NORM_METHOD "norm" @@ -95,6 +95,9 @@ value XMatrix_mul__float(vm *v, int nargs, value *args); value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); +value XMatrix_getcolumn__int(vm *v, int nargs, value *args); +value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); + value XMatrix_reshape(vm *v, int nargs, value *args); value XMatrix_dimensions(vm *v, int nargs, value *args); value XMatrix_count(vm *v, int nargs, value *args); @@ -105,9 +108,9 @@ value XMatrix_count(vm *v, int nargs, value *args); objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); -bool xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); -bool xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); -bool xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); +linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); +linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); +linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); void xmatrix_print(vm *v, objectxmatrix *m); diff --git a/test/index/complexmatrix_getcolumn.morpho b/test/index/complexmatrix_getcolumn.morpho new file mode 100644 index 00000000..ee1b4b37 --- /dev/null +++ b/test/index/complexmatrix_getcolumn.morpho @@ -0,0 +1,19 @@ +// Get columns of a ComplexMatrix + +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +print A.column(0) +// expect: [ 1 + 1im ] +// expect: [ 3 + 3im ] + +print A.column(1) +// expect: [ 2 + 2im ] +// expect: [ 4 + 4im ] + +print A.column(2) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/index/complexmatrix_setcolumn.morpho b/test/index/complexmatrix_setcolumn.morpho new file mode 100644 index 00000000..3e7e5e78 --- /dev/null +++ b/test/index/complexmatrix_setcolumn.morpho @@ -0,0 +1,22 @@ +// Set columns of a Matrix + +import newlinalg + +var A = ComplexMatrix(2,2) + +var b = ComplexMatrix(2,1) +b[0] = 1+1im +b[1] = 3+3im + +var c = ComplexMatrix(2,1) +c[0] = 2+2im +c[1] = 4+4im + +A.setColumn(0,b) +A.setColumn(1,c) + +print A +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + +print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/index/matrix_getcolumn.morpho b/test/index/matrix_getcolumn.morpho index 926f15db..1a46ce72 100644 --- a/test/index/matrix_getcolumn.morpho +++ b/test/index/matrix_getcolumn.morpho @@ -1,4 +1,4 @@ -// Set elements of a Matrix +// Get columns of a Matrix import newlinalg diff --git a/test/index/matrix_setcolumn.morpho b/test/index/matrix_setcolumn.morpho new file mode 100644 index 00000000..b879d651 --- /dev/null +++ b/test/index/matrix_setcolumn.morpho @@ -0,0 +1,22 @@ +// Set columns of a Matrix + +import newlinalg + +var A = XMatrix(2,2) + +var b = XMatrix(2,1) +b[0] = 1 +b[1] = 3 + +var c = XMatrix(2,1) +c[0] = 2 +c[1] = 4 + +A.setColumn(0,b) +A.setColumn(1,c) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' From 5c66fa1030ae05636a18862eaccbc97f243eba65 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 13:16:11 -0500 Subject: [PATCH 032/156] assign() method --- src/xcomplexmatrix.c | 1 + src/xmatrix.c | 10 ++++++++++ src/xmatrix.h | 1 + test/assign/complexmatrix_assign.morpho | 17 +++++++++++++++++ test/assign/matrix_assign.morpho | 16 ++++++++++++++++ 5 files changed, 45 insertions(+) create mode 100644 test/assign/complexmatrix_assign.morpho create mode 100644 test/assign/matrix_assign.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 197f75d2..a9079fca 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -223,6 +223,7 @@ value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 2babee7b..e0b90de0 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -362,6 +362,14 @@ value XMatrix_print(vm *v, int nargs, value *args) { return MORPHO_NIL; } +/** Copies the contents of one matrix into another */ +value XMatrix_assign(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + LINALG_ERRCHECKVM(xmatrix_copy(b, a)); + return MORPHO_NIL; +} + /** Clones a matrix */ value XMatrix_clone(vm *v, int nargs, value *args) { value out=MORPHO_NIL; @@ -600,7 +608,9 @@ value XMatrix_dimensions(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) + MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 64aa1458..780d932f 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -87,6 +87,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); void xmatrix_initialize(void); value XMatrix_print(vm *v, int nargs, value *args); +value XMatrix_assign(vm *v, int nargs, value *args); value XMatrix_clone(vm *v, int nargs, value *args); value XMatrix_add__xmatrix(vm *v, int nargs, value *args); diff --git a/test/assign/complexmatrix_assign.morpho b/test/assign/complexmatrix_assign.morpho new file mode 100644 index 00000000..d55502db --- /dev/null +++ b/test/assign/complexmatrix_assign.morpho @@ -0,0 +1,17 @@ +// Assign one ComplexMatrix to another + +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +var B = ComplexMatrix(2,2) + +B.assign(A) + +print B +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] diff --git a/test/assign/matrix_assign.morpho b/test/assign/matrix_assign.morpho new file mode 100644 index 00000000..7d2e7c8f --- /dev/null +++ b/test/assign/matrix_assign.morpho @@ -0,0 +1,16 @@ +// Assign one matrix to another + +import newlinalg + +var A = XMatrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +var B = XMatrix(2,2) +B.assign(A) + +print B +// expect: [ 1 2 ] +// expect: [ 3 4 ] \ No newline at end of file From 4d9a4ddc5192bf5ee7627b6e6f9ed955b09d1f13 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 15:52:19 -0500 Subject: [PATCH 033/156] enumerate --- src/xcomplexmatrix.c | 11 ++++++-- src/xmatrix.c | 28 +++++++++++++++++-- src/xmatrix.h | 11 +++++++- .../matrix_list_constructor.morpho | 9 ++++++ test/methods/complexmatrix_enumerate.morpho | 15 ++++++++++ test/methods/matrix_enumerate.morpho | 15 ++++++++++ 6 files changed, 84 insertions(+), 5 deletions(-) create mode 100644 test/constructors/matrix_list_constructor.morpho create mode 100644 test/methods/complexmatrix_enumerate.morpho create mode 100644 test/methods/matrix_enumerate.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index a9079fca..ba768c72 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -33,6 +33,11 @@ static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { complex_print(v, &cmplx); } +static value _getelfn(vm *v, double *el) { + objectcomplex *new = object_newcomplex(el[0], el[1]); + return morpho_wrapandbind(v, (object *) new); +} + /* ---------------------- * Constructor * ---------------------- */ @@ -117,6 +122,7 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { matrixinterfacedefn complexmatrixdefn = { .printelfn = _printelfn, + .getelfn = _getelfn, .solvefn = _solve }; @@ -240,8 +246,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMat MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.c b/src/xmatrix.c index e0b90de0..a3489b7e 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -71,6 +71,10 @@ static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { morpho_printf(v, "%g", (fabs(val)ncols*a->nrows); + } else if (incols*a->nrows) { + out=xmatrix_getinterface(a)->getelfn(v, a->elements+i*a->nvals); + } else { + linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); + } + + return out; +} + /** Number of matrix elements */ value XMatrix_count(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -629,8 +652,9 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setc MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "(_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "()", XMatrix_norm, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** diff --git a/src/xmatrix.h b/src/xmatrix.h index 780d932f..3a17e717 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -58,12 +58,20 @@ typedef struct { /** Function that prints a single matrix element */ typedef void (*xmatrix_printelfn_t) (vm *, objectxmatrix *, MatrixIdx_t, MatrixIdx_t); +/** Function that materializes a value from a pointer to an element */ +typedef value (*xmatrix_getelfn_t) (vm *, double *); + /** Function that solves a linear system */ typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *, objectxmatrix *, int *); +/** Function that sets a given entry given a value */ +//typedef void (*xmatrix_setfn_t) (objectxmatrix *, void *, value v); + typedef struct { xmatrix_printelfn_t printelfn; + xmatrix_getelfn_t getelfn; xmatrix_solvefn_t solvefn; +// xmatrix_setfn_t setfn; } matrixinterfacedefn; void xmatrix_addinterface(matrixinterfacedefn *defn); @@ -100,8 +108,9 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args); value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); value XMatrix_reshape(vm *v, int nargs, value *args); -value XMatrix_dimensions(vm *v, int nargs, value *args); +value XMatrix_enumerate(vm *v, int nargs, value *args); value XMatrix_count(vm *v, int nargs, value *args); +value XMatrix_dimensions(vm *v, int nargs, value *args); /* ------------------------------------------------------- * Interface diff --git a/test/constructors/matrix_list_constructor.morpho b/test/constructors/matrix_list_constructor.morpho new file mode 100644 index 00000000..22ab6b69 --- /dev/null +++ b/test/constructors/matrix_list_constructor.morpho @@ -0,0 +1,9 @@ +// Create a Matrix from a List of Lists + +import newlinalg + +var A = XMatrix([[1,2],[3,4]]) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/methods/complexmatrix_enumerate.morpho b/test/methods/complexmatrix_enumerate.morpho new file mode 100644 index 00000000..c8ed0711 --- /dev/null +++ b/test/methods/complexmatrix_enumerate.morpho @@ -0,0 +1,15 @@ +// Enumerate elements of a matrix + +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0] = 1+im +A[0,1] = 0+0im +A[1,0] = 0+0im +A[1,1] = 1-im + +for (x in A) print x +// expect: 1 + 1im +// expect: 0 + 0im +// expect: 0 + 0im +// expect: 1 - 1im \ No newline at end of file diff --git a/test/methods/matrix_enumerate.morpho b/test/methods/matrix_enumerate.morpho new file mode 100644 index 00000000..8d2eabe2 --- /dev/null +++ b/test/methods/matrix_enumerate.morpho @@ -0,0 +1,15 @@ +// Enumerate elements of a matrix + +import newlinalg + +var A = XMatrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +for (x in A) print x +// expect: 1 +// expect: 2 +// expect: 3 +// expect: 4 From 270147c429881cafb1e74d35ee66f390a1ce3f00 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 15:58:52 -0500 Subject: [PATCH 034/156] Simplify printelfn --- src/xcomplexmatrix.c | 6 ++---- src/xmatrix.c | 9 +++++---- src/xmatrix.h | 2 +- 3 files changed, 8 insertions(+), 9 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index ba768c72..05c537ee 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -26,10 +26,8 @@ typedef objectxmatrix objectcomplexmatrix; * Callbacks * ---------------------- */ -static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { - double *elptr; - xmatrix_getelementptr(m, i, j, &elptr); - objectcomplex cmplx = MORPHO_STATICCOMPLEX(elptr[0], elptr[1]); +static void _printelfn(vm *v, double *el) { + objectcomplex cmplx = MORPHO_STATICCOMPLEX(el[0], el[1]); complex_print(v, &cmplx); } diff --git a/src/xmatrix.c b/src/xmatrix.c index a3489b7e..e47536ec 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -65,9 +65,8 @@ objecttypedefn objectxmatrixdefn = { * XMatrix callbacks * ---------------------- */ -static void _printelfn(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { - double val; - xmatrix_getelement(m, i, j, &val); +static void _printelfn(vm *v, double *el) { + double val=*el; morpho_printf(v, "%g", (fabs(val)nrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - (*interface->printelfn) (v, m, i, j); + xmatrix_getelementptr(m, i, j, &elptr); + (*interface->printelfn) (v, elptr); morpho_printf(v, " "); } morpho_printf(v, "]%s", (inrows-1 ? "\n" : "")); diff --git a/src/xmatrix.h b/src/xmatrix.h index 3a17e717..6e55019c 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -56,7 +56,7 @@ typedef struct { * ------------------------------------------------------- */ /** Function that prints a single matrix element */ -typedef void (*xmatrix_printelfn_t) (vm *, objectxmatrix *, MatrixIdx_t, MatrixIdx_t); +typedef void (*xmatrix_printelfn_t) (vm *, double *); /** Function that materializes a value from a pointer to an element */ typedef value (*xmatrix_getelfn_t) (vm *, double *); From 2ad86558b0378be40b5c27c2b3d56d1104810d65 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 18:02:42 -0500 Subject: [PATCH 035/156] Accumulate --- src/xcomplexmatrix.c | 1 + src/xmatrix.c | 13 +++++++++++++ src/xmatrix.h | 1 + test/arithmetic/complexmatrix_acc.morpho | 14 ++++++++++++++ test/arithmetic/matrix_acc.morpho | 12 ++++++++++++ 5 files changed, 41 insertions(+) create mode 100644 test/arithmetic/complexmatrix_acc.morpho create mode 100644 test/arithmetic/matrix_acc.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 05c537ee..f97f39fd 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -236,6 +236,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", Comp MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index e47536ec..435532e1 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -465,6 +465,18 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { return out; } +/** Accumulate in place */ +value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)); + + double alpha=1.0; + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) morpho_runtimeerror(v, MATRIX_ARITHARGS); + + LINALG_ERRCHECKVM(xmatrix_axpy(alpha, b, a)); + return MORPHO_NIL; +} + /* ---------------- * Unary operations * ---------------- */ @@ -643,6 +655,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xma MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 6e55019c..f5cfa675 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -103,6 +103,7 @@ value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); +value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args); value XMatrix_getcolumn__int(vm *v, int nargs, value *args); value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); diff --git a/test/arithmetic/complexmatrix_acc.morpho b/test/arithmetic/complexmatrix_acc.morpho new file mode 100644 index 00000000..8213224b --- /dev/null +++ b/test/arithmetic/complexmatrix_acc.morpho @@ -0,0 +1,14 @@ +// In-place accumulate +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[0,1]=1-im +A[1,0]=1-im +A[1,1]=1+im + +A.acc(2,A) + +print A +// expect: [ 3 + 3im 3 - 3im ] +// expect: [ 3 - 3im 3 + 3im ] \ No newline at end of file diff --git a/test/arithmetic/matrix_acc.morpho b/test/arithmetic/matrix_acc.morpho new file mode 100644 index 00000000..e1b4f035 --- /dev/null +++ b/test/arithmetic/matrix_acc.morpho @@ -0,0 +1,12 @@ +// In-place accumulate +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=1 +A[1,0]=1 +A[1,1]=1 + +A.acc(2,A) + +print A From bcb78190e921b1f6f9ada2317edd1b79ef490c5a Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 20:26:42 -0500 Subject: [PATCH 036/156] inverse() --- src/xcomplexmatrix.c | 57 ++++++++++++--- src/xmatrix.c | 77 +++++++++++++++------ src/xmatrix.h | 2 + test/methods/complexmatrix_inverse.morpho | 12 ++++ test/methods/matrix_inverse.morpho | 12 ++++ test/methods/matrix_inverse_singular.morpho | 11 +++ 6 files changed, 140 insertions(+), 31 deletions(-) create mode 100644 test/methods/complexmatrix_inverse.morpho create mode 100644 test/methods/matrix_inverse.morpho create mode 100644 test/methods/matrix_inverse_singular.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index f97f39fd..da2362a0 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -36,6 +36,24 @@ static value _getelfn(vm *v, double *el) { return morpho_wrapandbind(v, (object *) new); } +/** Low level solve for linear system a.x = b + * @param[in|out] a - lhs; overwritten by LU decomposition + * @param[in|out] b - rhs; overwritten by solution + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns a matrix error code */ +static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); +#else + zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, + &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Constructor * ---------------------- */ @@ -96,19 +114,25 @@ objectmatrixerror complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatri return MATRIX_INCMPTBLDIM; } -/** Low level solve for linear system a.x = b - * @param[in|out] a - lhs; overwritten by LU decomposition - * @param[in|out] b - rhs; overwritten by solution - * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns a matrix error code */ -static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { - int n=a->nrows, nrhs = b->ncols, info; +/** Inverts the matrix a + * @param[in] a matrix to be inverted + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ +linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { + int nrows=a->nrows, ncols=a->ncols, info; + int pivot[nrows]; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); + info=LAPACKE_zgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); #else - zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, - &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); + zgetrf_(&nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, pivot, &info); +#endif + if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); +#else + int lwork=nrows*ncols; __LAPACK_double_complex work[nrows*ncols]; + zgetri_(&nrows, (__LAPACK_double_complex *) a->elements, &nrows, pivot, work, &lwork, &info); #endif return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); @@ -160,6 +184,18 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { return out; } +/** Inverts a matrix */ +value ComplexMatrix_inverse(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + objectcomplexmatrix *new = xmatrix_clone(a); + out = morpho_wrapandbind(v, (object *) new); + if (new) LINALG_ERRCHECKVM(complexmatrix_inverse(new)); + + return out; +} + /* --------- * Products * --------- */ @@ -237,6 +273,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 435532e1..79a7fc5c 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -74,6 +74,23 @@ static value _getelfn(vm *v, double *el) { return MORPHO_FLOAT(*el); } +/** Low level solve for linear system a.x = b + * @param[in|out] a - lhs; overwritten by LU decomposition + * @param[in|out] b - rhs; overwritten by solution + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns a matrix error code */ +static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, x->elements, n, pivot, y->elements, n); +#else + dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Constructors * ---------------------- */ @@ -245,23 +262,6 @@ linalgError_t xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { return LINALGERR_OK; } -/** Low level solve for linear system a.x = b - * @param[in|out] a - lhs; overwritten by LU decomposition - * @param[in|out] b - rhs; overwritten by solution - * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns a matrix error code */ -static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { - int n=a->nrows, nrhs = b->ncols, info; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, x->elements, n, pivot, y->elements, n); -#else - dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); -} - /** Solve the linear system a.x = b using stack allocated memory for temporary */ linalgError_t xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { int pivot[a->nrows]; @@ -293,6 +293,30 @@ linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { else return xmatrix_solvelarge(a, b); } +/** Inverts the matrix a + * @param[in] a matrix to be inverted + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ +linalgError_t xmatrix_inverse(objectxmatrix *a) { + int nrows=a->nrows, ncols=a->ncols, info; + int pivot[nrows]; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); +#else + dgetrf_(&nrows, &ncols, a->elements, &nrows, pivot, &info); +#endif + if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); +#else + int lwork=nrows*ncols; double work[nrows*ncols]; + dgetri_(&nrows, a->elements, &nrows, pivot, work, &lwork, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Display * ---------------------- */ @@ -457,10 +481,8 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { value out=MORPHO_NIL; objectxmatrix *sol = xmatrix_clone(b); - if (sol) { - xmatrix_solve(a, sol); // TODO: Error check - out = morpho_wrapandbind(v, (object *) sol); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + out = morpho_wrapandbind(v, (object *) sol); + if (sol) LINALG_ERRCHECKVM(xmatrix_solve(a, sol)); return out; } @@ -507,6 +529,18 @@ value XMatrix_norm(vm *v, int nargs, value *args) { return MORPHO_FLOAT(xmatrix_norm(a)); } +/** Inverts a matrix */ +value XMatrix_inverse(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + objectxmatrix *new = xmatrix_clone(a); + out = morpho_wrapandbind(v, (object *) new); + if (new) LINALG_ERRCHECKVM(xmatrix_inverse(new)); + + return out; +} + /* --------- * Products * --------- */ @@ -656,6 +690,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__floa MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index f5cfa675..84e34dea 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -87,6 +87,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_SETCOLUMN_METHOD "setColumn" #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_INNER_METHOD "inner" +#define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" #define XMATRIX_RESHAPE_METHOD "reshape" @@ -118,6 +119,7 @@ value XMatrix_dimensions(vm *v, int nargs, value *args); * ------------------------------------------------------- */ objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); +objectxmatrix *xmatrix_clone(objectxmatrix *in); linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); diff --git a/test/methods/complexmatrix_inverse.morpho b/test/methods/complexmatrix_inverse.morpho new file mode 100644 index 00000000..9ae06829 --- /dev/null +++ b/test/methods/complexmatrix_inverse.morpho @@ -0,0 +1,12 @@ +// Inverse +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=0+0im +A[0,1]=1+im +A[1,0]=1-im +A[1,1]=0+0im + +print A.inverse() +// expect: [ 0 + 0im 0.5 + 0.5im ] +// expect: [ 0.5 - 0.5im 0 + 0im ] diff --git a/test/methods/matrix_inverse.morpho b/test/methods/matrix_inverse.morpho new file mode 100644 index 00000000..f7f07541 --- /dev/null +++ b/test/methods/matrix_inverse.morpho @@ -0,0 +1,12 @@ +// Inverse +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +print A.inverse() +// expect: [ -2 1 ] +// expect: [ 1.5 -0.5 ] diff --git a/test/methods/matrix_inverse_singular.morpho b/test/methods/matrix_inverse_singular.morpho new file mode 100644 index 00000000..7180cd65 --- /dev/null +++ b/test/methods/matrix_inverse_singular.morpho @@ -0,0 +1,11 @@ +// Inverse +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=2 +A[1,1]=4 + +print A.inverse() +// expect error 'LnAlgMtrxSnglr' From 44796d6ba356f7beb2613b0a3218d688473a40a2 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 20:42:49 -0500 Subject: [PATCH 037/156] Common index method implementation --- src/xcomplexmatrix.c | 26 ++---------------------- src/xmatrix.c | 9 +++++--- src/xmatrix.h | 4 ++++ test/index/complexmatrix_getindex.morpho | 21 +++++++++++++++++++ 4 files changed, 33 insertions(+), 27 deletions(-) create mode 100644 test/index/complexmatrix_getindex.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index da2362a0..ce58b112 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -215,28 +215,6 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { return out; } -/* --------- - * index() - * --------- */ - -static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { - double *el; - LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &el)); - objectcomplex *new = object_newcomplex(el[0], el[1]); - return morpho_wrapandbind(v, (object *) new); -} - -value ComplexMatrix_index__int(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); -} - -value ComplexMatrix_index__int_int(vm *v, int nargs, value *args) { - unsigned int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); -} - /* --------- * setIndex() * --------- */ @@ -275,8 +253,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMat MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", ComplexMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", ComplexMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 79a7fc5c..ab4869c9 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -561,10 +561,13 @@ value XMatrix_inner(vm *v, int nargs, value *args) { * --------- */ static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { - double out=0.0; + value out=MORPHO_NIL; - LINALG_ERRCHECKVM(xmatrix_getelement(m, i, j, &out)); - return MORPHO_FLOAT(out); + double *elptr=NULL; + LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); + + if (elptr) out=xmatrix_getinterface(m)->getelfn(v, elptr); + return out; } value XMatrix_index__int(vm *v, int nargs, value *args) { diff --git a/src/xmatrix.h b/src/xmatrix.h index 84e34dea..4a4f2b25 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -106,6 +106,10 @@ value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args); + +value XMatrix_index__int(vm *v, int nargs, value *args); +value XMatrix_index__int_int(vm *v, int nargs, value *args); + value XMatrix_getcolumn__int(vm *v, int nargs, value *args); value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); diff --git a/test/index/complexmatrix_getindex.morpho b/test/index/complexmatrix_getindex.morpho new file mode 100644 index 00000000..e833722f --- /dev/null +++ b/test/index/complexmatrix_getindex.morpho @@ -0,0 +1,21 @@ +// Get elements of a ComplexMatrix + +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +// Array-like access +print A[0,0] // expect: 1 + 1im +print A[0,1] // expect: 2 + 2im +print A[1,0] // expect: 3 + 3im +print A[1,1] // expect: 4 + 4im + +// Vector-like access +print A[0] // expect: 1 + 1im +print A[1] // expect: 2 + 2im +print A[2] // expect: 3 + 3im +print A[3] // expect: 4 + 4im From 885e022d2cdc1f926aa23af5306794ff56133897 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sun, 21 Dec 2025 21:37:35 -0500 Subject: [PATCH 038/156] trace --- src/xcomplexmatrix.c | 54 ++++++++++++++++--------- src/xmatrix.c | 24 +++++++++-- src/xmatrix.h | 1 + test/methods/complexmatrix_trace.morpho | 11 +++++ test/methods/matrix_trace.morpho | 11 +++++ 5 files changed, 79 insertions(+), 22 deletions(-) create mode 100644 test/methods/complexmatrix_trace.morpho create mode 100644 test/methods/matrix_trace.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index ce58b112..4e24853a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -91,27 +91,33 @@ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t * ---------------------- */ /** Performs c <- alpha*(a*b) + beta*c with complex matrices */ -objectmatrixerror complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxmatrix *b, MorphoComplex beta, objectxmatrix *c) { - if (a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols) { - cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, - a->nrows, b->ncols, a->ncols, - &alpha, (__LAPACK_double_complex *) a->elements, - a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, - &beta, (__LAPACK_double_complex *) c->elements, c->nrows); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxmatrix *b, MorphoComplex beta, objectxmatrix *c) { + if (!(a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, + a->nrows, b->ncols, a->ncols, + &alpha, (__LAPACK_double_complex *) a->elements, + a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, + &beta, (__LAPACK_double_complex *) c->elements, c->nrows); + return LINALGERR_OK; } /** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ -objectmatrixerror complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { - if (a->ncols==b->ncols && a->nrows==b->nrows) { - cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, - (__LAPACK_double_complex *) b->elements, 1, - (__LAPACK_double_complex *) out); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { + if (!(a->ncols==b->ncols && a->nrows==b->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, + (__LAPACK_double_complex *) b->elements, 1, + (__LAPACK_double_complex *) out); + return LINALGERR_OK; +} + +/** Calculate the trace of a matrix */ +linalgError_t complexmatrix_trace(objectcomplexmatrix *a, MorphoComplex *out) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + MorphoComplex one = MCBuild(1.0, 0.0); + cblas_zdotu_sub(a->nrows, (__LAPACK_double_complex *) a->elements, a->ncols+1, (__LAPACK_double_complex *) &one, 0, (__LAPACK_double_complex *) out); + return LINALGERR_OK; } /** Inverts the matrix a @@ -184,6 +190,15 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { return out; } +/** Computes the trace */ +value ComplexMatrix_trace(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MorphoComplex tr=MCBuild(0,0); + LINALG_ERRCHECKVM(complexmatrix_trace(a, &tr)); + objectcomplex *new = object_newcomplex(creal(tr), cimag(tr)); + return morpho_wrapandbind(v, (object *) new); +} + /** Inverts a matrix */ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -207,7 +222,7 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { MorphoComplex prod=MCBuild(0.0, 0.0); value out = MORPHO_NIL; - if (complexmatrix_inner(a, b, &prod)==MATRIX_OK) { + if (complexmatrix_inner(a, b, &prod)==LINALGERR_OK) { objectcomplex *new = object_newcomplex(creal(prod), cimag(prod)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); @@ -259,6 +274,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index ab4869c9..61607a42 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -250,8 +250,17 @@ double xmatrix_linfnorm(objectxmatrix *a) { return a->elements[imax]; } +/** Calculate the trace of a matrix */ +linalgError_t xmatrix_trace(objectxmatrix *a, double *out) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + *out=1.0; + *out=cblas_ddot(a->nrows, a->elements, a->ncols+1, out, 0); + + return LINALGERR_OK; +} + /* ---------------------- - * Products + * Binary operations * ---------------------- */ /** Finds the Frobenius inner product of two matrices */ @@ -529,6 +538,14 @@ value XMatrix_norm(vm *v, int nargs, value *args) { return MORPHO_FLOAT(xmatrix_norm(a)); } +/** Computes the trace */ +value XMatrix_trace(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + double out=0.0; + LINALG_ERRCHECKVM(xmatrix_trace(a, &out)); + return MORPHO_FLOAT(out); +} + /** Inverts a matrix */ value XMatrix_inverse(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -701,8 +718,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "(_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "()", XMatrix_norm, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 4a4f2b25..afc0602b 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -90,6 +90,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" #define XMATRIX_RESHAPE_METHOD "reshape" +#define XMATRIX_TRACE_METHOD "trace" #define XMATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" diff --git a/test/methods/complexmatrix_trace.morpho b/test/methods/complexmatrix_trace.morpho new file mode 100644 index 00000000..694a60aa --- /dev/null +++ b/test/methods/complexmatrix_trace.morpho @@ -0,0 +1,11 @@ +// Inverse +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.trace() +// expect: 5 + 5im diff --git a/test/methods/matrix_trace.morpho b/test/methods/matrix_trace.morpho new file mode 100644 index 00000000..dc70fcf5 --- /dev/null +++ b/test/methods/matrix_trace.morpho @@ -0,0 +1,11 @@ +// Inverse +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +print A.trace() +// expect: 5 From 481a1ca7bcc6c2baa886c788db3ab013851f0653 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 11:03:50 -0500 Subject: [PATCH 039/156] Eigenvalues and Eigensystem --- src/newlinalg.c | 4 + src/newlinalg.h | 8 + src/xcomplexmatrix.c | 38 ++- src/xmatrix.c | 266 ++++++++++++------ src/xmatrix.h | 32 ++- test/methods/complexmatrix_eigensystem.morpho | 17 ++ test/methods/complexmatrix_eigenvalues.morpho | 13 + test/methods/matrix_eigensystem.morpho | 16 ++ test/methods/matrix_eigenvalues.morpho | 11 + 9 files changed, 304 insertions(+), 101 deletions(-) create mode 100644 test/methods/complexmatrix_eigensystem.morpho create mode 100644 test/methods/complexmatrix_eigenvalues.morpho create mode 100644 test/methods/matrix_eigensystem.morpho create mode 100644 test/methods/matrix_eigenvalues.morpho diff --git a/src/newlinalg.c b/src/newlinalg.c index 749c0005..9789b464 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -21,6 +21,8 @@ void linalg_raiseerror(vm *v, linalgError_t err) { case LINALGERR_MATRIX_SINGULAR: morpho_runtimeerror(v, LINALG_SINGULAR); break; case LINALGERR_NOT_SQUARE: morpho_runtimeerror(v, LINALG_NOTSQ); break; case LINALGERR_LAPACK_INVLD_ARGS: morpho_runtimeerror(v, LINALG_LAPACK_ARGS); break; + case LINALGERR_OP_FAILED: morpho_runtimeerror(v, LINALG_OPFAILED); break; + case LINALGERR_NOT_SUPPORTED: morpho_runtimeerror(v, LINALG_NOTSUPPORTED); break; case LINALGERR_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; } } @@ -37,6 +39,8 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_SINGULAR, ERROR_HALT, LINALG_SINGULAR_MSG); morpho_defineerror(LINALG_NOTSQ, ERROR_HALT, LINALG_NOTSQ_MSG); morpho_defineerror(LINALG_LAPACK_ARGS, ERROR_HALT, LINALG_LAPACK_ARGS_MSG); + morpho_defineerror(LINALG_OPFAILED, ERROR_HALT, LINALG_OPFAILED_MSG); + morpho_defineerror(LINALG_NOTSUPPORTED, ERROR_HALT, LINALG_NOTSUPPORTED_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index c2826ce5..95241ee7 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -22,6 +22,8 @@ typedef enum { LINALGERR_MATRIX_SINGULAR, // Matrix is singular LINALGERR_NOT_SQUARE, // Matrix is required to be square for this algorithm LINALGERR_LAPACK_INVLD_ARGS, // Invalid arguments to LAPACK routine + LINALGERR_OP_FAILED, // Matrix operation failed + LINALGERR_NOT_SUPPORTED, // Operation not supported for this matrix type LINALGERR_ALLOC // Memory allocation failed } linalgError_t; @@ -44,6 +46,12 @@ typedef enum { #define LINALG_LAPACK_ARGS "LnAlgLapackArgs" #define LINALG_LAPACK_ARGS_MSG "Lapack function called with invalid arguments." +#define LINALG_OPFAILED "LnAlgMtrxOpFld" +#define LINALG_OPFAILED_MSG "Matrix operation failed." + +#define LINALG_NOTSUPPORTED "LnAlgMtrxNtSpprtd" +#define LINALG_NOTSUPPORTED_MSG "Operation not supported for this matrix type." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 4e24853a..76028bcb 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -36,11 +36,7 @@ static value _getelfn(vm *v, double *el) { return morpho_wrapandbind(v, (object *) new); } -/** Low level solve for linear system a.x = b - * @param[in|out] a - lhs; overwritten by LU decomposition - * @param[in|out] b - rhs; overwritten by solution - * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns a matrix error code */ +/** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -54,6 +50,20 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level eigensolver */ +static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { + int info, n=a->nrows; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, acopy, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); +#else + int lwork=4*n; MorphoComplex work[4*n]; double rwork[2*n]; + zgeev_("N", (vec ? "V" : "N"), &n, (__LAPACK_double_complex *) a->elements, &n, (__LAPACK_double_complex *) w, NULL, &n, (__LAPACK_double_complex *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Constructor * ---------------------- */ @@ -151,7 +161,8 @@ linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { matrixinterfacedefn complexmatrixdefn = { .printelfn = _printelfn, .getelfn = _getelfn, - .solvefn = _solve + .solvefn = _solve, + .eigenfn = _eigen }; /* ********************************************************************** @@ -258,6 +269,13 @@ MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), + MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), @@ -268,13 +286,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMat MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 61607a42..7490facd 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -74,11 +74,7 @@ static value _getelfn(vm *v, double *el) { return MORPHO_FLOAT(*el); } -/** Low level solve for linear system a.x = b - * @param[in|out] a - lhs; overwritten by LU decomposition - * @param[in|out] b - rhs; overwritten by solution - * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns a matrix error code */ +/** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -91,6 +87,21 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level eigensolver */ +static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { + int info, n=a->nrows; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); +#else + int lwork=4*n; double work[4*n], wr[n], wi[n]; + dgeev_("N", (vec ? "V" : "N"), &n, a->elements, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); + for (int i=0; i0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Constructors * ---------------------- */ @@ -326,6 +337,20 @@ linalgError_t xmatrix_inverse(objectxmatrix *a) { return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Interface to eigensystem */ +linalgError_t xmatrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + + xmatrix_eigenfn_t efn = xmatrix_getinterface(a)->eigenfn; + if (!efn) return LINALGERR_NOT_SUPPORTED; + + objectxmatrix *temp = xmatrix_clone(a); + if (!temp) return LINALGERR_ALLOC; + + return efn(temp, w, vec); +} + /* ---------------------- * Display * ---------------------- */ @@ -352,7 +377,8 @@ void xmatrix_print(vm *v, objectxmatrix *m) { matrixinterfacedefn xmatrixdefn = { .printelfn = _printelfn, .getelfn = _getelfn, - .solvefn = _solve + .solvefn = _solve, + .eigenfn = _eigen }; /* ********************************************************************** @@ -368,7 +394,6 @@ value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { } value xmatrix_constructor__list(vm *v, int nargs, value *args) { - return MORPHO_NIL; } @@ -418,6 +443,78 @@ value XMatrix_clone(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +/* --------- + * index() + * --------- */ + +static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { + value out=MORPHO_NIL; + + double *elptr=NULL; + LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); + + if (elptr) out=xmatrix_getinterface(m)->getelfn(v, elptr); + return out; +} + +value XMatrix_index__int(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); +} + +value XMatrix_index__int_int(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); +} + +/* --------- + * setindex() + * --------- */ + +value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { + double val=0.0; + if (!morpho_valuetofloat(in, &val)) true; // TODO: Should raise an error (Matrix doesn't!) + LINALG_ERRCHECKVM(xmatrix_setelement(m, i, j, val)); + return MORPHO_NIL; +} + +value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); +} + +value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); +} + +/* --------- + * column + * --------- */ + +value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (i>=0 && incols) { + objectxmatrix *new=xmatrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); + if (new) xmatrix_getcolumn(a, i, new); + out=morpho_wrapandbind(v, (object *)new); + } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); + + return out; +} + +value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { + LINALG_ERRCHECKVM(xmatrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); + return MORPHO_NIL; +} + /* ---------- * Arithmetic * ---------- */ @@ -558,91 +655,96 @@ value XMatrix_inverse(vm *v, int nargs, value *args) { return out; } -/* --------- - * Products - * --------- */ - -/** Frobenius inner product */ -value XMatrix_inner(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - double prod=0.0; +bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { + value ev[n]; + for (int i=0; incols; + MorphoComplex w[n]; + linalgError_t err=xmatrix_eigen(a, w, NULL); + if (err==LINALGERR_OK) { + if (_processeigenvalues(v, n, w, &out)) { + morpho_bindobjects(v, 1, &out); // TODO: Correctly bind subsidiary values + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + } else linalg_raiseerror(v, err); - double *elptr=NULL; - LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); - - if (elptr) out=xmatrix_getinterface(m)->getelfn(v, elptr); return out; } -value XMatrix_index__int(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); -} - -value XMatrix_index__int_int(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); -} - -/* --------- - * setindex() - * --------- */ +#define _CHK(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _eigensystem_cleanup; } -value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { - double val=0.0; - if (!morpho_valuetofloat(in, &val)) true; // TODO: Should raise an error (Matrix doesn't!) - LINALG_ERRCHECKVM(xmatrix_setelement(m, i, j, val)); +/** Finds the eigenvalues and eigenvectors of a matrix */ +value XMatrix_eigensystem(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + value ev=MORPHO_NIL; // Will hold eigenvalues + objectxmatrix *evec=NULL; // Holds eigenvectors + objecttuple *otuple=NULL; // Tuple to return everything + + MatrixIdx_t n=a->ncols; + MorphoComplex w[n]; + + evec=xmatrix_clone(a); + _CHK(evec); + + linalgError_t err=xmatrix_eigen(a, w, evec); + if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto _eigensystem_cleanup; } + + _CHK(_processeigenvalues(v, n, w, &ev)); + + value outtuple[2] = { ev, MORPHO_OBJECT(evec) }; + otuple = object_newtuple(2, outtuple); + _CHK(otuple); + + return morpho_wrapandbind(v, (object *) otuple); // TODO: Correctly bind subsidiary values + +_eigensystem_cleanup: + if (evec) object_free((object *) evec); + if (otuple) object_free((object *) otuple); + morpho_freeobject(ev); // TODO: Free contents? + return MORPHO_NIL; } - -value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); -} - -value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); -} +#undef _CHK /* --------- - * column + * Products * --------- */ -value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { +/** Frobenius inner product */ +value XMatrix_inner(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + double prod=0.0; - if (i>=0 && incols) { - objectxmatrix *new=xmatrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); - if (new) xmatrix_getcolumn(a, i, new); - out=morpho_wrapandbind(v, (object *)new); - } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); + LINALG_ERRCHECKVM(xmatrix_inner(a, b, &prod)); - return out; -} - -value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { - LINALG_ERRCHECKVM(xmatrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), - MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); - return MORPHO_NIL; + return MORPHO_FLOAT(prod); } /* --------- @@ -702,6 +804,12 @@ MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), @@ -710,17 +818,13 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__floa MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index afc0602b..d4866eb6 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -61,8 +61,19 @@ typedef void (*xmatrix_printelfn_t) (vm *, double *); /** Function that materializes a value from a pointer to an element */ typedef value (*xmatrix_getelfn_t) (vm *, double *); -/** Function that solves a linear system */ -typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *, objectxmatrix *, int *); +/** Function that solves the linear system a.x = b + * @param[in|out] a - lhs; overwritten by LU decomposition + * @param[in|out] b - rhs; overwritten by solution + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns a matrix error code */ +typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *a, objectxmatrix *b, int *pivot); + +/** Function that finds the eigenvalues of a matrix + * @param[in|out] a - lhs; overwritten + * @param[out] w - eigenvalues; dimension N + * @param[out] vec - right eigenvectors. Can be NULL if only eigenvalues requested + * @returns a matrix error code */ +typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec); /** Function that sets a given entry given a value */ //typedef void (*xmatrix_setfn_t) (objectxmatrix *, void *, value v); @@ -71,6 +82,7 @@ typedef struct { xmatrix_printelfn_t printelfn; xmatrix_getelfn_t getelfn; xmatrix_solvefn_t solvefn; + xmatrix_eigenfn_t eigenfn; // xmatrix_setfn_t setfn; } matrixinterfacedefn; @@ -86,6 +98,8 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_GETCOLUMN_METHOD "column" #define XMATRIX_SETCOLUMN_METHOD "setColumn" #define XMATRIX_DIMENSIONS_METHOD "dimensions" +#define XMATRIX_EIGENVALUES_METHOD "eigenvalues" +#define XMATRIX_EIGENSYSTEM_METHOD "eigensystem" #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" @@ -100,6 +114,12 @@ value XMatrix_print(vm *v, int nargs, value *args); value XMatrix_assign(vm *v, int nargs, value *args); value XMatrix_clone(vm *v, int nargs, value *args); +value XMatrix_index__int(vm *v, int nargs, value *args); +value XMatrix_index__int_int(vm *v, int nargs, value *args); + +value XMatrix_getcolumn__int(vm *v, int nargs, value *args); +value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); + value XMatrix_add__xmatrix(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); @@ -107,12 +127,8 @@ value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args); - -value XMatrix_index__int(vm *v, int nargs, value *args); -value XMatrix_index__int_int(vm *v, int nargs, value *args); - -value XMatrix_getcolumn__int(vm *v, int nargs, value *args); -value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); +value XMatrix_eigenvalues(vm *v, int nargs, value *args); +value XMatrix_eigensystem(vm *v, int nargs, value *args); value XMatrix_reshape(vm *v, int nargs, value *args); value XMatrix_enumerate(vm *v, int nargs, value *args); diff --git a/test/methods/complexmatrix_eigensystem.morpho b/test/methods/complexmatrix_eigensystem.morpho new file mode 100644 index 00000000..1cd107c4 --- /dev/null +++ b/test/methods/complexmatrix_eigensystem.morpho @@ -0,0 +1,17 @@ +// Eigenvalues and eigenvectors +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=0im +A[0,1]=im +A[1,0]=im +A[1,1]=0im + +var es=A.eigensystem() +print es +// expect: ((0 + 1im, 0 - 1im), ) + +print es[0] +// expect: (0 + 1im, 0 - 1im) + +print es[1] diff --git a/test/methods/complexmatrix_eigenvalues.morpho b/test/methods/complexmatrix_eigenvalues.morpho new file mode 100644 index 00000000..d2244599 --- /dev/null +++ b/test/methods/complexmatrix_eigenvalues.morpho @@ -0,0 +1,13 @@ +// Eigenvalues +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=0+0im +A[0,1]=im +A[1,0]=im +A[1,1]=0+0im + +print A + +print A.eigenvalues() +// expect: (0 + 1im, 0 - 1im) diff --git a/test/methods/matrix_eigensystem.morpho b/test/methods/matrix_eigensystem.morpho new file mode 100644 index 00000000..ea7dfd98 --- /dev/null +++ b/test/methods/matrix_eigensystem.morpho @@ -0,0 +1,16 @@ +// Eigenvalues and eigenvectors +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=0 +A[0,1]=1 +A[1,0]=1 +A[1,1]=0 + +var es=A.eigensystem() + +print es + +print es[0] + +print es[1] diff --git a/test/methods/matrix_eigenvalues.morpho b/test/methods/matrix_eigenvalues.morpho new file mode 100644 index 00000000..430f25ba --- /dev/null +++ b/test/methods/matrix_eigenvalues.morpho @@ -0,0 +1,11 @@ +// Eigenvalues +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=0 +A[0,1]=1 +A[1,0]=1 +A[1,1]=0 + +print A.eigenvalues() +// expect: (-1, 1) From f4ea12016b96f108613b4ab8e9d9061bdb6b1de5 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 16:35:03 -0500 Subject: [PATCH 040/156] Add scalar or nil to XMatrix --- src/newlinalg.c | 1 + src/newlinalg.h | 3 ++ src/xmatrix.c | 40 ++++++++++++++++++++++++ test/arithmetic/matrix_add_nil.morpho | 8 +++++ test/arithmetic/matrix_add_scalar.morpho | 8 +++++ test/arithmetic/matrix_sub_scalar.morpho | 8 +++++ 6 files changed, 68 insertions(+) create mode 100644 test/arithmetic/matrix_add_nil.morpho create mode 100644 test/arithmetic/matrix_add_scalar.morpho create mode 100644 test/arithmetic/matrix_sub_scalar.morpho diff --git a/src/newlinalg.c b/src/newlinalg.c index 9789b464..5c66b306 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -41,6 +41,7 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_LAPACK_ARGS, ERROR_HALT, LINALG_LAPACK_ARGS_MSG); morpho_defineerror(LINALG_OPFAILED, ERROR_HALT, LINALG_OPFAILED_MSG); morpho_defineerror(LINALG_NOTSUPPORTED, ERROR_HALT, LINALG_NOTSUPPORTED_MSG); + morpho_defineerror(LINALG_INVLDARGS, ERROR_HALT, LINALG_INVLDARGS_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index 95241ee7..365501df 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -52,6 +52,9 @@ typedef enum { #define LINALG_NOTSUPPORTED "LnAlgMtrxNtSpprtd" #define LINALG_NOTSUPPORTED_MSG "Operation not supported for this matrix type." +#define LINALG_INVLDARGS "LnAlgMtrxInvldArg" +#define LINALG_INVLDARGS_MSG "Invalid arguments to matrix method." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/xmatrix.c b/src/xmatrix.c index 7490facd..8ba23337 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -226,6 +226,14 @@ linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, dou return LINALGERR_OK; } +/** Performs x <- z + alpha */ +linalgError_t xmatrix_addscalar(objectxmatrix *a, double alpha) { + for (MatrixCount_t i=0; incols*a->nrows; i++) { + a->elements[i*a->nvals]+=alpha; + } + return MATRIX_OK; +} + /* ---------------------- * Unary operations * ---------------------- */ @@ -519,6 +527,7 @@ value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { * Arithmetic * ---------- */ +/** Add a vector */ static value _axpy(vm *v, int nargs, value *args, double alpha) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -534,14 +543,41 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { return out; } +/** Add a scalar */ +static value _xpa(vm *v, int nargs, value *args, double beta) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + double alpha; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { + objectxmatrix *new = xmatrix_clone(a); + if (new) xmatrix_addscalar(new, alpha*beta); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); + + return out; +} + value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,1.0); } +value XMatrix_add__nil(vm *v, int nargs, value *args) { + return MORPHO_SELF(args); +} + +value XMatrix_add__x(vm *v, int nargs, value *args) { + return _xpa(v,nargs,args,1.0); +} + value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,-1.0); } +value XMatrix_sub__x(vm *v, int nargs, value *args) { + return _xpa(v,nargs,args,-1.0); +} + value XMatrix_mul__float(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; @@ -811,7 +847,11 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex_ MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), diff --git a/test/arithmetic/matrix_add_nil.morpho b/test/arithmetic/matrix_add_nil.morpho new file mode 100644 index 00000000..23f4f313 --- /dev/null +++ b/test/arithmetic/matrix_add_nil.morpho @@ -0,0 +1,8 @@ +// Add a scalar +import newlinalg + +var A = XMatrix(2,2) + +print A + nil +// expect: [ 0 0 ] +// expect: [ 0 0 ] diff --git a/test/arithmetic/matrix_add_scalar.morpho b/test/arithmetic/matrix_add_scalar.morpho new file mode 100644 index 00000000..8d456908 --- /dev/null +++ b/test/arithmetic/matrix_add_scalar.morpho @@ -0,0 +1,8 @@ +// Add a scalar +import newlinalg + +var A = XMatrix(2,2) + +print A + 2 +// expect: [ 2 2 ] +// expect: [ 2 2 ] diff --git a/test/arithmetic/matrix_sub_scalar.morpho b/test/arithmetic/matrix_sub_scalar.morpho new file mode 100644 index 00000000..511a29b9 --- /dev/null +++ b/test/arithmetic/matrix_sub_scalar.morpho @@ -0,0 +1,8 @@ +// Subtract a scalar +import newlinalg + +var A = XMatrix(2,2) + +print A - 2 +// expect: [ -2 -2 ] +// expect: [ -2 -2 ] From a58595d0cedc3bc563bc3541db7e62621387c420 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 18:50:17 -0500 Subject: [PATCH 041/156] Add scalars, nil and more to complexmatrix --- src/xcomplexmatrix.c | 8 ++++- src/xmatrix.c | 29 ++++++++++++------- src/xmatrix.h | 4 +++ test/arithmetic/complexmatrix_add_nil.morpho | 8 +++++ .../complexmatrix_add_scalar.morpho | 10 +++++++ test/arithmetic/complexmatrix_addr_nil.morpho | 8 +++++ .../complexmatrix_sub_scalar.morpho | 10 +++++++ .../complexmatrix_subr_scalar.morpho | 10 +++++++ test/arithmetic/matrix_addr_nil.morpho | 9 ++++++ test/arithmetic/matrix_addr_scalar.morpho | 8 +++++ test/arithmetic/matrix_subr_scalar.morpho | 10 +++++++ 11 files changed, 103 insertions(+), 11 deletions(-) create mode 100644 test/arithmetic/complexmatrix_add_nil.morpho create mode 100644 test/arithmetic/complexmatrix_add_scalar.morpho create mode 100644 test/arithmetic/complexmatrix_addr_nil.morpho create mode 100644 test/arithmetic/complexmatrix_sub_scalar.morpho create mode 100644 test/arithmetic/complexmatrix_subr_scalar.morpho create mode 100644 test/arithmetic/matrix_addr_nil.morpho create mode 100644 test/arithmetic/matrix_addr_scalar.morpho create mode 100644 test/arithmetic/matrix_subr_scalar.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 76028bcb..def38098 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -275,9 +275,15 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), - MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 8ba23337..29931275 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -226,10 +226,13 @@ linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, dou return LINALGERR_OK; } -/** Performs x <- z + alpha */ -linalgError_t xmatrix_addscalar(objectxmatrix *a, double alpha) { +/** Performs z <- alpha*z + beta */ +linalgError_t xmatrix_addscalar(objectxmatrix *a, double alpha, double beta) { for (MatrixCount_t i=0; incols*a->nrows; i++) { - a->elements[i*a->nvals]+=alpha; + for (int k=0; knvals; k++) { + a->elements[i*a->nvals+k]*=alpha; + if (k==0) a->elements[i*a->nvals+k]+=beta; + } } return MATRIX_OK; } @@ -544,14 +547,14 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { } /** Add a scalar */ -static value _xpa(vm *v, int nargs, value *args, double beta) { +static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; - double alpha; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { + double beta; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &beta)) { objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_addscalar(new, alpha*beta); + if (new) xmatrix_addscalar(new, sgna, beta*sgnb); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INVLDARGS); @@ -567,7 +570,7 @@ value XMatrix_add__nil(vm *v, int nargs, value *args) { } value XMatrix_add__x(vm *v, int nargs, value *args) { - return _xpa(v,nargs,args,1.0); + return _xpa(v,nargs,args,1.0,1.0); } value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { @@ -575,7 +578,11 @@ value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { } value XMatrix_sub__x(vm *v, int nargs, value *args) { - return _xpa(v,nargs,args,-1.0); + return _xpa(v,nargs,args,1.0,-1.0); +} + +value XMatrix_subr__x(vm *v, int nargs, value *args) { + return _xpa(v,nargs,args,-1.0,1.0); } value XMatrix_mul__float(vm *v, int nargs, value *args) { @@ -836,7 +843,6 @@ value XMatrix_dimensions(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) - MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), @@ -849,9 +855,12 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setc MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "XMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index d4866eb6..c7fa2be5 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -121,7 +121,11 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args); value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); value XMatrix_add__xmatrix(vm *v, int nargs, value *args); +value XMatrix_add__nil(vm *v, int nargs, value *args); +value XMatrix_add__x(vm *v, int nargs, value *args); value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); +value XMatrix_sub__x(vm *v, int nargs, value *args); +value XMatrix_subr__x(vm *v, int nargs, value *args); value XMatrix_mul__float(vm *v, int nargs, value *args); value XMatrix_div__float(vm *v, int nargs, value *args); value XMatrix_div__xmatrix(vm *v, int nargs, value *args); diff --git a/test/arithmetic/complexmatrix_add_nil.morpho b/test/arithmetic/complexmatrix_add_nil.morpho new file mode 100644 index 00000000..b5fb8c5f --- /dev/null +++ b/test/arithmetic/complexmatrix_add_nil.morpho @@ -0,0 +1,8 @@ +// Add a scalar +import newlinalg + +var A = ComplexMatrix(2,2) + +print A + nil +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] diff --git a/test/arithmetic/complexmatrix_add_scalar.morpho b/test/arithmetic/complexmatrix_add_scalar.morpho new file mode 100644 index 00000000..99921516 --- /dev/null +++ b/test/arithmetic/complexmatrix_add_scalar.morpho @@ -0,0 +1,10 @@ +// Add a scalar +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[1,1]=1+im + +print A + 2 +// expect: [ 3 + 1im 2 + 0im ] +// expect: [ 2 + 0im 3 + 1im ] diff --git a/test/arithmetic/complexmatrix_addr_nil.morpho b/test/arithmetic/complexmatrix_addr_nil.morpho new file mode 100644 index 00000000..16c4fade --- /dev/null +++ b/test/arithmetic/complexmatrix_addr_nil.morpho @@ -0,0 +1,8 @@ +// Add a scalar +import newlinalg + +var A = ComplexMatrix(2,2) + +print nil + A +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] diff --git a/test/arithmetic/complexmatrix_sub_scalar.morpho b/test/arithmetic/complexmatrix_sub_scalar.morpho new file mode 100644 index 00000000..fed8777b --- /dev/null +++ b/test/arithmetic/complexmatrix_sub_scalar.morpho @@ -0,0 +1,10 @@ +// Subtract a scalar +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=2+2im +A[1,1]=2+2im + +print A - 2 +// expect: [ 0 + 2im -2 + 0im ] +// expect: [ -2 + 0im 0 + 2im ] \ No newline at end of file diff --git a/test/arithmetic/complexmatrix_subr_scalar.morpho b/test/arithmetic/complexmatrix_subr_scalar.morpho new file mode 100644 index 00000000..547e355c --- /dev/null +++ b/test/arithmetic/complexmatrix_subr_scalar.morpho @@ -0,0 +1,10 @@ +// Subtract a scalar +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[1,1]=1+im + +print 2 - A +// expect: [ 1 - 1im 2 + 0im ] +// expect: [ 2 + 0im 1 - 1im ] diff --git a/test/arithmetic/matrix_addr_nil.morpho b/test/arithmetic/matrix_addr_nil.morpho new file mode 100644 index 00000000..2cd52c76 --- /dev/null +++ b/test/arithmetic/matrix_addr_nil.morpho @@ -0,0 +1,9 @@ +// Add nil from the right +import newlinalg + +var A = XMatrix(2,2) +A += 1 + +print nil + A +// expect: [ 1 1 ] +// expect: [ 1 1 ] diff --git a/test/arithmetic/matrix_addr_scalar.morpho b/test/arithmetic/matrix_addr_scalar.morpho new file mode 100644 index 00000000..e50b3336 --- /dev/null +++ b/test/arithmetic/matrix_addr_scalar.morpho @@ -0,0 +1,8 @@ +// Add a scalar from the right +import newlinalg + +var A = XMatrix(2,2) + +print 2 + A +// expect: [ 2 2 ] +// expect: [ 2 2 ] diff --git a/test/arithmetic/matrix_subr_scalar.morpho b/test/arithmetic/matrix_subr_scalar.morpho new file mode 100644 index 00000000..02ac3acd --- /dev/null +++ b/test/arithmetic/matrix_subr_scalar.morpho @@ -0,0 +1,10 @@ +// Subtract a scalar +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[1,1]=1 + +print 2 - A +// expect: [ 1 2 ] +// expect: [ 2 1 ] From 464293c8cefb2b9307b32bf3b0f323baee250552 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 19:09:12 -0500 Subject: [PATCH 042/156] Transpose --- src/xcomplexmatrix.c | 1 + src/xmatrix.c | 45 +++++++++++++++++---- src/xmatrix.h | 5 ++- test/methods/complexmatrix_transpose.morpho | 14 +++++++ test/methods/matrix_transpose.morpho | 14 +++++++ 5 files changed, 71 insertions(+), 8 deletions(-) create mode 100644 test/methods/complexmatrix_transpose.morpho create mode 100644 test/methods/matrix_transpose.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index def38098..bf820fad 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -291,6 +291,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div_ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 29931275..e5a5e7d3 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -226,15 +226,29 @@ linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, dou return LINALGERR_OK; } -/** Performs z <- alpha*z + beta */ -linalgError_t xmatrix_addscalar(objectxmatrix *a, double alpha, double beta) { - for (MatrixCount_t i=0; incols*a->nrows; i++) { - for (int k=0; knvals; k++) { - a->elements[i*a->nvals+k]*=alpha; - if (k==0) a->elements[i*a->nvals+k]+=beta; +/** Performs x <- alpha*x + beta */ +linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta) { + for (MatrixCount_t i=0; incols*x->nrows; i++) { + for (int k=0; knvals; k++) { + x->elements[i*x->nvals+k]*=alpha; + if (k==0) x->elements[i*x->nvals+k]+=beta; } } - return MATRIX_OK; + return LINALGERR_OK; +} + +/** Performs y <- x^T>*/ +linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y) { + if (!(x->ncols==y->nrows && x->nrows==y->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + for (MatrixCount_t i=0; incols; i++) { + for (MatrixCount_t j=0; jnrows; j++) { + for (int k=0; knvals; k++) { + y->elements[j*y->nrows*y->nvals+i*y->nvals+k] = x->elements[i*x->nrows*x->nvals+j*x->nvals+k]; + } + } + } + return LINALGERR_OK; } /* ---------------------- @@ -698,6 +712,22 @@ value XMatrix_inverse(vm *v, int nargs, value *args) { return out; } +/** Inverts a matrix */ +value XMatrix_transpose(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + objectxmatrix *new = xmatrix_clone(a); + if (new) { + new->ncols=a->nrows; + new->nrows=a->ncols; + LINALG_ERRCHECKVM(xmatrix_transpose(a, new)); + } + out = morpho_wrapandbind(v, (object *) new); + + return out; +} + bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { value ev[n]; for (int i=0; i Date: Tue, 23 Dec 2025 23:21:15 -0500 Subject: [PATCH 043/156] Add in additional tests --- TEST_COVERAGE_ANALYSIS.md | 176 ++++++++++++++++++ .../complexmatrix_div_matrix.morpho | 17 ++ .../complexmatrix_div_scalar.morpho | 11 ++ .../complexmatrix_mul_matrix.morpho | 19 ++ .../complexmatrix_mul_scalar.morpho | 11 ++ test/arithmetic/matrix_div_matrix.morpho | 17 ++ test/arithmetic/matrix_div_scalar.morpho | 11 ++ test/arithmetic/matrix_mul_matrix.morpho | 19 ++ test/arithmetic/matrix_mul_scalar.morpho | 11 ++ test/assign/complexmatrix_clone.morpho | 19 ++ .../complexmatrix_constructor.morpho | 10 + ...mplexmatrix_incompatible_dimensions.morpho | 13 ++ .../complexmatrix_index_out_of_bounds.morpho | 10 + .../complexmatrix_non_square_error.morpho | 10 + test/index/complexmatrix_setindex.morpho | 21 +++ test/methods/complexmatrix_count.morpho | 14 ++ test/methods/complexmatrix_dimensions.morpho | 9 + test/methods/complexmatrix_inner.morpho | 18 ++ .../complexmatrix_inverse_singular.morpho | 12 ++ test/methods/complexmatrix_reshape.morpho | 16 ++ test/methods/matrix_count.morpho | 14 ++ test/methods/matrix_dimensions.morpho | 9 + test/methods/matrix_inner.morpho | 18 ++ test/methods/matrix_norm.morpho | 12 ++ test/methods/matrix_reshape.morpho | 16 ++ 25 files changed, 513 insertions(+) create mode 100644 TEST_COVERAGE_ANALYSIS.md create mode 100644 test/arithmetic/complexmatrix_div_matrix.morpho create mode 100644 test/arithmetic/complexmatrix_div_scalar.morpho create mode 100644 test/arithmetic/complexmatrix_mul_matrix.morpho create mode 100644 test/arithmetic/complexmatrix_mul_scalar.morpho create mode 100644 test/arithmetic/matrix_div_matrix.morpho create mode 100644 test/arithmetic/matrix_div_scalar.morpho create mode 100644 test/arithmetic/matrix_mul_matrix.morpho create mode 100644 test/arithmetic/matrix_mul_scalar.morpho create mode 100644 test/assign/complexmatrix_clone.morpho create mode 100644 test/constructors/complexmatrix_constructor.morpho create mode 100644 test/errors/complexmatrix_incompatible_dimensions.morpho create mode 100644 test/errors/complexmatrix_index_out_of_bounds.morpho create mode 100644 test/errors/complexmatrix_non_square_error.morpho create mode 100644 test/index/complexmatrix_setindex.morpho create mode 100644 test/methods/complexmatrix_count.morpho create mode 100644 test/methods/complexmatrix_dimensions.morpho create mode 100644 test/methods/complexmatrix_inner.morpho create mode 100644 test/methods/complexmatrix_inverse_singular.morpho create mode 100644 test/methods/complexmatrix_reshape.morpho create mode 100644 test/methods/matrix_count.morpho create mode 100644 test/methods/matrix_dimensions.morpho create mode 100644 test/methods/matrix_inner.morpho create mode 100644 test/methods/matrix_norm.morpho create mode 100644 test/methods/matrix_reshape.morpho diff --git a/TEST_COVERAGE_ANALYSIS.md b/TEST_COVERAGE_ANALYSIS.md new file mode 100644 index 00000000..6bce7c99 --- /dev/null +++ b/TEST_COVERAGE_ANALYSIS.md @@ -0,0 +1,176 @@ +# Test Coverage Analysis for morpho-newlinalg + +## Overview +This document analyzes the completeness of the test suite for the linear algebra library, with a focus on ComplexMatrix functionality. + +## Current Test Coverage + +### Constructors +**XMatrix:** +- ✅ `matrix_constructor.morpho` - Basic constructor +- ✅ `matrix_list_constructor.morpho` - Constructor from list of lists +- ✅ `vector_constructor.morpho` - Vector constructor + +**ComplexMatrix:** +- ❌ Missing: `complexmatrix_constructor.morpho` - Basic constructor test +- ❌ Missing: `complexmatrix_list_constructor.morpho` - Constructor from list (if supported) + +### Indexing Operations +**XMatrix:** +- ✅ `matrix_getindex.morpho` - Get element by index +- ✅ `matrix_setindex.morpho` - Set element by index +- ✅ `matrix_getcolumn.morpho` - Get column +- ✅ `matrix_setcolumn.morpho` - Set column + +**ComplexMatrix:** +- ✅ `complexmatrix_getindex.morpho` - Get element by index +- ❌ Missing: `complexmatrix_setindex.morpho` - Set element by index +- ✅ `complexmatrix_getcolumn.morpho` - Get column +- ✅ `complexmatrix_setcolumn.morpho` - Set column + +### Arithmetic Operations +**XMatrix:** +- ✅ `matrix_add_scalar.morpho` - Add scalar +- ✅ `matrix_add_nil.morpho` - Add nil +- ✅ `matrix_addr_nil.morpho` - Addr nil +- ✅ `matrix_addr_scalar.morpho` - Addr scalar +- ✅ `matrix_sub_scalar.morpho` - Subtract scalar +- ✅ `matrix_subr_scalar.morpho` - Subr scalar +- ✅ `matrix_acc.morpho` - Accumulate +- ❌ Missing: `matrix_mul_scalar.morpho` - Multiply by scalar +- ❌ Missing: `matrix_mul_matrix.morpho` - Matrix multiplication +- ❌ Missing: `matrix_div_scalar.morpho` - Divide by scalar +- ❌ Missing: `matrix_div_matrix.morpho` - Matrix division (solve) + +**ComplexMatrix:** +- ✅ `complexmatrix_add_scalar.morpho` - Add scalar +- ✅ `complexmatrix_add_nil.morpho` - Add nil +- ✅ `complexmatrix_addr_nil.morpho` - Addr nil +- ❌ Missing: `complexmatrix_sub_scalar.morpho` - Subtract scalar (exists but may need verification) +- ✅ `complexmatrix_subr_scalar.morpho` - Subr scalar +- ✅ `complexmatrix_acc.morpho` - Accumulate +- ❌ Missing: `complexmatrix_mul_scalar.morpho` - Multiply by scalar +- ❌ Missing: `complexmatrix_mul_matrix.morpho` - Matrix multiplication +- ❌ Missing: `complexmatrix_div_scalar.morpho` - Divide by scalar +- ❌ Missing: `complexmatrix_div_matrix.morpho` - Matrix division (solve) + +### Assignment and Cloning +**XMatrix:** +- ✅ `matrix_assign.morpho` - Assignment + +**ComplexMatrix:** +- ✅ `complexmatrix_assign.morpho` - Assignment +- ❌ Missing: `complexmatrix_clone.morpho` - Clone test + +### Methods +**XMatrix:** +- ✅ `matrix_trace.morpho` - Trace +- ✅ `matrix_inverse.morpho` - Inverse +- ✅ `matrix_inverse_singular.morpho` - Inverse error case +- ✅ `matrix_transpose.morpho` - Transpose +- ✅ `matrix_eigenvalues.morpho` - Eigenvalues +- ✅ `matrix_eigensystem.morpho` - Eigensystem +- ✅ `matrix_enumerate.morpho` - Enumerate +- ❌ Missing: `matrix_inner.morpho` - Inner product +- ❌ Missing: `matrix_norm.morpho` - Norm +- ❌ Missing: `matrix_count.morpho` - Count +- ❌ Missing: `matrix_dimensions.morpho` - Dimensions +- ❌ Missing: `matrix_reshape.morpho` - Reshape + +**ComplexMatrix:** +- ✅ `complexmatrix_trace.morpho` - Trace +- ✅ `complexmatrix_inverse.morpho` - Inverse +- ❌ Missing: `complexmatrix_inverse_singular.morpho` - Inverse error case +- ✅ `complexmatrix_transpose.morpho` - Transpose +- ✅ `complexmatrix_eigenvalues.morpho` - Eigenvalues +- ✅ `complexmatrix_eigensystem.morpho` - Eigensystem +- ✅ `complexmatrix_enumerate.morpho` - Enumerate +- ❌ Missing: `complexmatrix_inner.morpho` - Inner product +- ❌ Missing: `complexmatrix_count.morpho` - Count +- ❌ Missing: `complexmatrix_dimensions.morpho` - Dimensions +- ❌ Missing: `complexmatrix_reshape.morpho` - Reshape + +## Missing Test Categories + +### 1. Error Handling Tests +- **Out of bounds indexing** - Test negative indices, indices >= matrix dimensions +- **Incompatible dimensions** - Test arithmetic operations with mismatched dimensions +- **Non-square matrix errors** - Test operations requiring square matrices (trace, inverse, eigenvalues) on non-square matrices +- **Singular matrix errors** - Test inverse on singular complex matrices +- **Division by zero** - Test scalar division by zero + +### 2. Edge Cases +- **Empty matrices** - 0x0, 0x1, 1x0 matrices +- **Single element matrices** - 1x1 matrices +- **Large matrices** - Stress tests for large dimensions +- **Zero matrices** - Operations with all-zero matrices +- **Identity matrices** - Operations with identity matrices (if constructor exists) + +### 3. Complex-Specific Tests +- **Pure real matrices** - ComplexMatrix with all real values +- **Pure imaginary matrices** - ComplexMatrix with all imaginary values +- **Complex conjugation** - Test if inner product uses conjugation correctly +- **Complex arithmetic edge cases** - Operations with very small/large complex numbers + +### 4. Integration Tests +- **Chained operations** - Multiple operations in sequence +- **Mixed operations** - Combining different operations +- **Memory management** - Large number of operations to check for leaks + +## Recommended New Tests + +### ✅ Created Tests (High Priority - Core Functionality) + +1. ✅ **complexmatrix_constructor.morpho** - Basic constructor test +2. ✅ **complexmatrix_mul_matrix.morpho** - Matrix multiplication +3. ✅ **complexmatrix_mul_scalar.morpho** - Scalar multiplication +4. ✅ **complexmatrix_div_scalar.morpho** - Scalar division +5. ✅ **complexmatrix_div_matrix.morpho** - Matrix division (linear solve) +6. ✅ **complexmatrix_inner.morpho** - Inner product +7. ✅ **complexmatrix_inverse_singular.morpho** - Error case for singular matrix +8. ✅ **complexmatrix_count.morpho** - Count elements +9. ✅ **complexmatrix_dimensions.morpho** - Get dimensions +10. ✅ **complexmatrix_reshape.morpho** - Reshape matrix +11. ✅ **complexmatrix_setindex.morpho** - Set element by index +12. ✅ **complexmatrix_clone.morpho** - Clone matrix + +### ✅ Created Tests (Error Cases) + +13. ✅ **complexmatrix_index_out_of_bounds.morpho** - Out of bounds indexing +14. ✅ **complexmatrix_incompatible_dimensions.morpho** - Dimension mismatch errors +15. ✅ **complexmatrix_non_square_error.morpho** - Non-square matrix errors + +### ✅ Created Tests (XMatrix Missing Tests) + +16. ✅ **matrix_mul_matrix.morpho** - XMatrix matrix multiplication +17. ✅ **matrix_mul_scalar.morpho** - XMatrix scalar multiplication +18. ✅ **matrix_div_scalar.morpho** - XMatrix scalar division +19. ✅ **matrix_div_matrix.morpho** - XMatrix matrix division +20. ✅ **matrix_inner.morpho** - XMatrix inner product +21. ✅ **matrix_norm.morpho** - XMatrix norm +22. ✅ **matrix_count.morpho** - XMatrix count +23. ✅ **matrix_dimensions.morpho** - XMatrix dimensions +24. ✅ **matrix_reshape.morpho** - XMatrix reshape + +### Lower Priority (Edge Cases) + +23. **complexmatrix_empty.morpho** - Empty matrix operations +24. **complexmatrix_single_element.morpho** - 1x1 matrix +25. **complexmatrix_zero.morpho** - Zero matrix operations +26. **complexmatrix_pure_real.morpho** - Real-valued complex matrix +27. **complexmatrix_pure_imaginary.morpho** - Imaginary-valued complex matrix + +## Test Organization Suggestions + +Consider organizing tests into additional subdirectories: +- `errors/` - Error handling tests +- `edge_cases/` - Edge case tests +- `integration/` - Integration tests + +## Notes + +- ComplexMatrix does NOT have a `norm()` method (unlike XMatrix) +- Some operations may need tests for both real and complex scalars +- The `inner()` method for ComplexMatrix uses complex conjugation (Frobenius inner product) +- Matrix division (`/`) is implemented as solving a linear system + diff --git a/test/arithmetic/complexmatrix_div_matrix.morpho b/test/arithmetic/complexmatrix_div_matrix.morpho new file mode 100644 index 00000000..a41a8967 --- /dev/null +++ b/test/arithmetic/complexmatrix_div_matrix.morpho @@ -0,0 +1,17 @@ +// Divide ComplexMatrix by ComplexMatrix (solve linear system) +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+0im +A[0,1]=0+1im +A[1,0]=1+0im +A[1,1]=1+1im + +var b = ComplexMatrix(2,1) +b[0,0]=1+1im +b[1,0]=2+0im + +print b / A +// expect: [ 1 + 0im ] +// expect: [ 1 + 1im ] + diff --git a/test/arithmetic/complexmatrix_div_scalar.morpho b/test/arithmetic/complexmatrix_div_scalar.morpho new file mode 100644 index 00000000..8f5e2d3a --- /dev/null +++ b/test/arithmetic/complexmatrix_div_scalar.morpho @@ -0,0 +1,11 @@ +// Divide ComplexMatrix by scalar +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=2+2im +A[1,1]=4+4im + +print A / 2 +// expect: [ 1 + 1im 0 + 0im ] +// expect: [ 0 + 0im 2 + 2im ] + diff --git a/test/arithmetic/complexmatrix_mul_matrix.morpho b/test/arithmetic/complexmatrix_mul_matrix.morpho new file mode 100644 index 00000000..15fb9b0d --- /dev/null +++ b/test/arithmetic/complexmatrix_mul_matrix.morpho @@ -0,0 +1,19 @@ +// Multiply two ComplexMatrices +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = ComplexMatrix(2,2) +B[0,0]=1+0im +B[0,1]=0+1im +B[1,0]=1+0im +B[1,1]=0+1im + +print A * B +// expect: [ 3 + 1im 2 + 3im ] +// expect: [ 7 + 3im 4 + 7im ] + diff --git a/test/arithmetic/complexmatrix_mul_scalar.morpho b/test/arithmetic/complexmatrix_mul_scalar.morpho new file mode 100644 index 00000000..66f9379a --- /dev/null +++ b/test/arithmetic/complexmatrix_mul_scalar.morpho @@ -0,0 +1,11 @@ +// Multiply ComplexMatrix by scalar +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[1,1]=2+2im + +print A * 2 +// expect: [ 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 4 + 4im ] + diff --git a/test/arithmetic/matrix_div_matrix.morpho b/test/arithmetic/matrix_div_matrix.morpho new file mode 100644 index 00000000..eb37485b --- /dev/null +++ b/test/arithmetic/matrix_div_matrix.morpho @@ -0,0 +1,17 @@ +// Divide XMatrix by XMatrix (solve linear system) +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var b = XMatrix(2,1) +b[0]=1 +b[1]=2 + +print b / A +// expect: [ 0 ] +// expect: [ 0.5 ] + diff --git a/test/arithmetic/matrix_div_scalar.morpho b/test/arithmetic/matrix_div_scalar.morpho new file mode 100644 index 00000000..79a829cc --- /dev/null +++ b/test/arithmetic/matrix_div_scalar.morpho @@ -0,0 +1,11 @@ +// Divide XMatrix by scalar +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=2 +A[1,1]=4 + +print A / 2 +// expect: [ 1 0 ] +// expect: [ 0 2 ] + diff --git a/test/arithmetic/matrix_mul_matrix.morpho b/test/arithmetic/matrix_mul_matrix.morpho new file mode 100644 index 00000000..01ec46ed --- /dev/null +++ b/test/arithmetic/matrix_mul_matrix.morpho @@ -0,0 +1,19 @@ +// Multiply two XMatrices +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var B = XMatrix(2,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=1 + +print A * B +// expect: [ 1 2 ] +// expect: [ 3 4 ] + diff --git a/test/arithmetic/matrix_mul_scalar.morpho b/test/arithmetic/matrix_mul_scalar.morpho new file mode 100644 index 00000000..190e4def --- /dev/null +++ b/test/arithmetic/matrix_mul_scalar.morpho @@ -0,0 +1,11 @@ +// Multiply XMatrix by scalar +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[1,1]=2 + +print A * 2 +// expect: [ 2 0 ] +// expect: [ 0 4 ] + diff --git a/test/assign/complexmatrix_clone.morpho b/test/assign/complexmatrix_clone.morpho new file mode 100644 index 00000000..3e1a2b61 --- /dev/null +++ b/test/assign/complexmatrix_clone.morpho @@ -0,0 +1,19 @@ +// Clone a ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = A.clone() + +// Modify original +A[0,0]=9+9im + +// Clone should be unchanged +print B +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + diff --git a/test/constructors/complexmatrix_constructor.morpho b/test/constructors/complexmatrix_constructor.morpho new file mode 100644 index 00000000..daf69f52 --- /dev/null +++ b/test/constructors/complexmatrix_constructor.morpho @@ -0,0 +1,10 @@ +// Create a ComplexMatrix + +import newlinalg + +var A = ComplexMatrix(2,2) + +print A +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] + diff --git a/test/errors/complexmatrix_incompatible_dimensions.morpho b/test/errors/complexmatrix_incompatible_dimensions.morpho new file mode 100644 index 00000000..f9f59eef --- /dev/null +++ b/test/errors/complexmatrix_incompatible_dimensions.morpho @@ -0,0 +1,13 @@ +// Incompatible dimensions error +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im + +var B = ComplexMatrix(3,3) +B[0,0]=1+1im + +// Try to add incompatible matrices +print A + B +// expect error 'LnAlgMtrxIncmptbl' + diff --git a/test/errors/complexmatrix_index_out_of_bounds.morpho b/test/errors/complexmatrix_index_out_of_bounds.morpho new file mode 100644 index 00000000..6b09281d --- /dev/null +++ b/test/errors/complexmatrix_index_out_of_bounds.morpho @@ -0,0 +1,10 @@ +// Index out of bounds error +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im + +// Try to access out of bounds +print A[5,5] +// expect error 'LnAlgMtrxIndxBnds' + diff --git a/test/errors/complexmatrix_non_square_error.morpho b/test/errors/complexmatrix_non_square_error.morpho new file mode 100644 index 00000000..16fb77df --- /dev/null +++ b/test/errors/complexmatrix_non_square_error.morpho @@ -0,0 +1,10 @@ +// Non-square matrix error (for operations requiring square matrices) +import newlinalg + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im + +// Try trace on non-square matrix +print A.trace() +// expect error 'LnAlgMtrxNtSq' + diff --git a/test/index/complexmatrix_setindex.morpho b/test/index/complexmatrix_setindex.morpho new file mode 100644 index 00000000..ad73e4bf --- /dev/null +++ b/test/index/complexmatrix_setindex.morpho @@ -0,0 +1,21 @@ +// Set elements of a ComplexMatrix + +import newlinalg + +var A = ComplexMatrix(2,2) + +// Set using two indices +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +print A +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + +// Set using single index (vector-like) +A[0] = 5+5im +print A[0,0] +// expect: 5 + 5im + diff --git a/test/methods/complexmatrix_count.morpho b/test/methods/complexmatrix_count.morpho new file mode 100644 index 00000000..481b8eab --- /dev/null +++ b/test/methods/complexmatrix_count.morpho @@ -0,0 +1,14 @@ +// Count elements in ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im +A[0,1]=2+2im +A[0,2]=3+3im +A[1,0]=4+4im +A[1,1]=5+5im +A[1,2]=6+6im + +print A.count() +// expect: 6 + diff --git a/test/methods/complexmatrix_dimensions.morpho b/test/methods/complexmatrix_dimensions.morpho new file mode 100644 index 00000000..1b6cb8b9 --- /dev/null +++ b/test/methods/complexmatrix_dimensions.morpho @@ -0,0 +1,9 @@ +// Get dimensions of ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im + +print A.dimensions() +// expect: (2, 3) + diff --git a/test/methods/complexmatrix_inner.morpho b/test/methods/complexmatrix_inner.morpho new file mode 100644 index 00000000..f747e5a4 --- /dev/null +++ b/test/methods/complexmatrix_inner.morpho @@ -0,0 +1,18 @@ +// Inner product of ComplexMatrices (Frobenius inner product with conjugation) +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = ComplexMatrix(2,2) +B[0,0]=1+0im +B[0,1]=0+1im +B[1,0]=1+0im +B[1,1]=0+1im + +print A.inner(B) +// expect: 10 - 10im + diff --git a/test/methods/complexmatrix_inverse_singular.morpho b/test/methods/complexmatrix_inverse_singular.morpho new file mode 100644 index 00000000..90f1e954 --- /dev/null +++ b/test/methods/complexmatrix_inverse_singular.morpho @@ -0,0 +1,12 @@ +// Inverse of singular ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+0im +A[0,1]=2+0im +A[1,0]=2+0im +A[1,1]=4+0im + +print A.inverse() +// expect error 'LnAlgMtrxSnglr' + diff --git a/test/methods/complexmatrix_reshape.morpho b/test/methods/complexmatrix_reshape.morpho new file mode 100644 index 00000000..e17789d9 --- /dev/null +++ b/test/methods/complexmatrix_reshape.morpho @@ -0,0 +1,16 @@ +// Reshape ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +A.reshape(4,1) +print A +// expect: [ 1 + 1im ] +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] +// expect: [ 4 + 4im ] + diff --git a/test/methods/matrix_count.morpho b/test/methods/matrix_count.morpho new file mode 100644 index 00000000..133144ae --- /dev/null +++ b/test/methods/matrix_count.morpho @@ -0,0 +1,14 @@ +// Count elements in XMatrix +import newlinalg + +var A = XMatrix(2,3) +A[0,0]=1 +A[0,1]=2 +A[0,2]=3 +A[1,0]=4 +A[1,1]=5 +A[1,2]=6 + +print A.count() +// expect: 6 + diff --git a/test/methods/matrix_dimensions.morpho b/test/methods/matrix_dimensions.morpho new file mode 100644 index 00000000..ba8eabc1 --- /dev/null +++ b/test/methods/matrix_dimensions.morpho @@ -0,0 +1,9 @@ +// Get dimensions of XMatrix +import newlinalg + +var A = XMatrix(2,3) +A[0,0]=1 + +print A.dimensions() +// expect: (2, 3) + diff --git a/test/methods/matrix_inner.morpho b/test/methods/matrix_inner.morpho new file mode 100644 index 00000000..f37c665e --- /dev/null +++ b/test/methods/matrix_inner.morpho @@ -0,0 +1,18 @@ +// Inner product of XMatrices +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var B = XMatrix(2,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=1 + +print A.inner(B) +// expect: 5 + diff --git a/test/methods/matrix_norm.morpho b/test/methods/matrix_norm.morpho new file mode 100644 index 00000000..e64447ca --- /dev/null +++ b/test/methods/matrix_norm.morpho @@ -0,0 +1,12 @@ +// Norm of XMatrix +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=3 +A[0,1]=4 +A[1,0]=0 +A[1,1]=0 + +print A.norm() +// expect: 5 + diff --git a/test/methods/matrix_reshape.morpho b/test/methods/matrix_reshape.morpho new file mode 100644 index 00000000..d6722d24 --- /dev/null +++ b/test/methods/matrix_reshape.morpho @@ -0,0 +1,16 @@ +// Reshape XMatrix +import newlinalg + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +A.reshape(4,1) +print A +// expect: [ 1 ] +// expect: [ 2 ] +// expect: [ 3 ] +// expect: [ 4 ] + From d319dfc2fdb36c9b0905372c85323d892cf5eb3e Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 23:30:44 -0500 Subject: [PATCH 044/156] Delete TEST_COVERAGE_ANALYSIS.md --- TEST_COVERAGE_ANALYSIS.md | 176 -------------------------------------- 1 file changed, 176 deletions(-) delete mode 100644 TEST_COVERAGE_ANALYSIS.md diff --git a/TEST_COVERAGE_ANALYSIS.md b/TEST_COVERAGE_ANALYSIS.md deleted file mode 100644 index 6bce7c99..00000000 --- a/TEST_COVERAGE_ANALYSIS.md +++ /dev/null @@ -1,176 +0,0 @@ -# Test Coverage Analysis for morpho-newlinalg - -## Overview -This document analyzes the completeness of the test suite for the linear algebra library, with a focus on ComplexMatrix functionality. - -## Current Test Coverage - -### Constructors -**XMatrix:** -- ✅ `matrix_constructor.morpho` - Basic constructor -- ✅ `matrix_list_constructor.morpho` - Constructor from list of lists -- ✅ `vector_constructor.morpho` - Vector constructor - -**ComplexMatrix:** -- ❌ Missing: `complexmatrix_constructor.morpho` - Basic constructor test -- ❌ Missing: `complexmatrix_list_constructor.morpho` - Constructor from list (if supported) - -### Indexing Operations -**XMatrix:** -- ✅ `matrix_getindex.morpho` - Get element by index -- ✅ `matrix_setindex.morpho` - Set element by index -- ✅ `matrix_getcolumn.morpho` - Get column -- ✅ `matrix_setcolumn.morpho` - Set column - -**ComplexMatrix:** -- ✅ `complexmatrix_getindex.morpho` - Get element by index -- ❌ Missing: `complexmatrix_setindex.morpho` - Set element by index -- ✅ `complexmatrix_getcolumn.morpho` - Get column -- ✅ `complexmatrix_setcolumn.morpho` - Set column - -### Arithmetic Operations -**XMatrix:** -- ✅ `matrix_add_scalar.morpho` - Add scalar -- ✅ `matrix_add_nil.morpho` - Add nil -- ✅ `matrix_addr_nil.morpho` - Addr nil -- ✅ `matrix_addr_scalar.morpho` - Addr scalar -- ✅ `matrix_sub_scalar.morpho` - Subtract scalar -- ✅ `matrix_subr_scalar.morpho` - Subr scalar -- ✅ `matrix_acc.morpho` - Accumulate -- ❌ Missing: `matrix_mul_scalar.morpho` - Multiply by scalar -- ❌ Missing: `matrix_mul_matrix.morpho` - Matrix multiplication -- ❌ Missing: `matrix_div_scalar.morpho` - Divide by scalar -- ❌ Missing: `matrix_div_matrix.morpho` - Matrix division (solve) - -**ComplexMatrix:** -- ✅ `complexmatrix_add_scalar.morpho` - Add scalar -- ✅ `complexmatrix_add_nil.morpho` - Add nil -- ✅ `complexmatrix_addr_nil.morpho` - Addr nil -- ❌ Missing: `complexmatrix_sub_scalar.morpho` - Subtract scalar (exists but may need verification) -- ✅ `complexmatrix_subr_scalar.morpho` - Subr scalar -- ✅ `complexmatrix_acc.morpho` - Accumulate -- ❌ Missing: `complexmatrix_mul_scalar.morpho` - Multiply by scalar -- ❌ Missing: `complexmatrix_mul_matrix.morpho` - Matrix multiplication -- ❌ Missing: `complexmatrix_div_scalar.morpho` - Divide by scalar -- ❌ Missing: `complexmatrix_div_matrix.morpho` - Matrix division (solve) - -### Assignment and Cloning -**XMatrix:** -- ✅ `matrix_assign.morpho` - Assignment - -**ComplexMatrix:** -- ✅ `complexmatrix_assign.morpho` - Assignment -- ❌ Missing: `complexmatrix_clone.morpho` - Clone test - -### Methods -**XMatrix:** -- ✅ `matrix_trace.morpho` - Trace -- ✅ `matrix_inverse.morpho` - Inverse -- ✅ `matrix_inverse_singular.morpho` - Inverse error case -- ✅ `matrix_transpose.morpho` - Transpose -- ✅ `matrix_eigenvalues.morpho` - Eigenvalues -- ✅ `matrix_eigensystem.morpho` - Eigensystem -- ✅ `matrix_enumerate.morpho` - Enumerate -- ❌ Missing: `matrix_inner.morpho` - Inner product -- ❌ Missing: `matrix_norm.morpho` - Norm -- ❌ Missing: `matrix_count.morpho` - Count -- ❌ Missing: `matrix_dimensions.morpho` - Dimensions -- ❌ Missing: `matrix_reshape.morpho` - Reshape - -**ComplexMatrix:** -- ✅ `complexmatrix_trace.morpho` - Trace -- ✅ `complexmatrix_inverse.morpho` - Inverse -- ❌ Missing: `complexmatrix_inverse_singular.morpho` - Inverse error case -- ✅ `complexmatrix_transpose.morpho` - Transpose -- ✅ `complexmatrix_eigenvalues.morpho` - Eigenvalues -- ✅ `complexmatrix_eigensystem.morpho` - Eigensystem -- ✅ `complexmatrix_enumerate.morpho` - Enumerate -- ❌ Missing: `complexmatrix_inner.morpho` - Inner product -- ❌ Missing: `complexmatrix_count.morpho` - Count -- ❌ Missing: `complexmatrix_dimensions.morpho` - Dimensions -- ❌ Missing: `complexmatrix_reshape.morpho` - Reshape - -## Missing Test Categories - -### 1. Error Handling Tests -- **Out of bounds indexing** - Test negative indices, indices >= matrix dimensions -- **Incompatible dimensions** - Test arithmetic operations with mismatched dimensions -- **Non-square matrix errors** - Test operations requiring square matrices (trace, inverse, eigenvalues) on non-square matrices -- **Singular matrix errors** - Test inverse on singular complex matrices -- **Division by zero** - Test scalar division by zero - -### 2. Edge Cases -- **Empty matrices** - 0x0, 0x1, 1x0 matrices -- **Single element matrices** - 1x1 matrices -- **Large matrices** - Stress tests for large dimensions -- **Zero matrices** - Operations with all-zero matrices -- **Identity matrices** - Operations with identity matrices (if constructor exists) - -### 3. Complex-Specific Tests -- **Pure real matrices** - ComplexMatrix with all real values -- **Pure imaginary matrices** - ComplexMatrix with all imaginary values -- **Complex conjugation** - Test if inner product uses conjugation correctly -- **Complex arithmetic edge cases** - Operations with very small/large complex numbers - -### 4. Integration Tests -- **Chained operations** - Multiple operations in sequence -- **Mixed operations** - Combining different operations -- **Memory management** - Large number of operations to check for leaks - -## Recommended New Tests - -### ✅ Created Tests (High Priority - Core Functionality) - -1. ✅ **complexmatrix_constructor.morpho** - Basic constructor test -2. ✅ **complexmatrix_mul_matrix.morpho** - Matrix multiplication -3. ✅ **complexmatrix_mul_scalar.morpho** - Scalar multiplication -4. ✅ **complexmatrix_div_scalar.morpho** - Scalar division -5. ✅ **complexmatrix_div_matrix.morpho** - Matrix division (linear solve) -6. ✅ **complexmatrix_inner.morpho** - Inner product -7. ✅ **complexmatrix_inverse_singular.morpho** - Error case for singular matrix -8. ✅ **complexmatrix_count.morpho** - Count elements -9. ✅ **complexmatrix_dimensions.morpho** - Get dimensions -10. ✅ **complexmatrix_reshape.morpho** - Reshape matrix -11. ✅ **complexmatrix_setindex.morpho** - Set element by index -12. ✅ **complexmatrix_clone.morpho** - Clone matrix - -### ✅ Created Tests (Error Cases) - -13. ✅ **complexmatrix_index_out_of_bounds.morpho** - Out of bounds indexing -14. ✅ **complexmatrix_incompatible_dimensions.morpho** - Dimension mismatch errors -15. ✅ **complexmatrix_non_square_error.morpho** - Non-square matrix errors - -### ✅ Created Tests (XMatrix Missing Tests) - -16. ✅ **matrix_mul_matrix.morpho** - XMatrix matrix multiplication -17. ✅ **matrix_mul_scalar.morpho** - XMatrix scalar multiplication -18. ✅ **matrix_div_scalar.morpho** - XMatrix scalar division -19. ✅ **matrix_div_matrix.morpho** - XMatrix matrix division -20. ✅ **matrix_inner.morpho** - XMatrix inner product -21. ✅ **matrix_norm.morpho** - XMatrix norm -22. ✅ **matrix_count.morpho** - XMatrix count -23. ✅ **matrix_dimensions.morpho** - XMatrix dimensions -24. ✅ **matrix_reshape.morpho** - XMatrix reshape - -### Lower Priority (Edge Cases) - -23. **complexmatrix_empty.morpho** - Empty matrix operations -24. **complexmatrix_single_element.morpho** - 1x1 matrix -25. **complexmatrix_zero.morpho** - Zero matrix operations -26. **complexmatrix_pure_real.morpho** - Real-valued complex matrix -27. **complexmatrix_pure_imaginary.morpho** - Imaginary-valued complex matrix - -## Test Organization Suggestions - -Consider organizing tests into additional subdirectories: -- `errors/` - Error handling tests -- `edge_cases/` - Edge case tests -- `integration/` - Integration tests - -## Notes - -- ComplexMatrix does NOT have a `norm()` method (unlike XMatrix) -- Some operations may need tests for both real and complex scalars -- The `inner()` method for ComplexMatrix uses complex conjugation (Frobenius inner product) -- Matrix division (`/`) is implemented as solving a linear system - From 9401167d3d2379156915ba9c457f7ec83fce6ce1 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 23 Dec 2025 23:39:00 -0500 Subject: [PATCH 045/156] Fix minor errors --- src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index bf820fad..87b62200 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -55,7 +55,7 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v int info, n=a->nrows; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, acopy, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); + info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, (__LAPACK_double_complex *) w, NULL, n, (vec ? vec->elements : NULL), n); #else int lwork=4*n; MorphoComplex work[4*n]; double rwork[2*n]; zgeev_("N", (vec ? "V" : "N"), &n, (__LAPACK_double_complex *) a->elements, &n, (__LAPACK_double_complex *) w, NULL, &n, (__LAPACK_double_complex *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); diff --git a/src/xmatrix.c b/src/xmatrix.c index e5a5e7d3..64e6423f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -79,7 +79,7 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, x->elements, n, pivot, y->elements, n); + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); #else dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); #endif @@ -826,7 +826,7 @@ value XMatrix_inner(vm *v, int nargs, value *args) { /** Reshape a matrix */ value XMatrix_reshape(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); From 001fdcfd42e3f1930a6168feb7b360b87b3a865e Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 08:47:06 -0500 Subject: [PATCH 046/156] Generic setindex methods --- src/newlinalg.c | 2 + src/newlinalg.h | 4 ++ src/xcomplexmatrix.c | 38 ++++------ src/xmatrix.c | 23 +++--- src/xmatrix.h | 72 ++++++++++--------- test/index/complexmatrix_setindex_real.morpho | 16 +++++ 6 files changed, 86 insertions(+), 69 deletions(-) create mode 100644 test/index/complexmatrix_setindex_real.morpho diff --git a/src/newlinalg.c b/src/newlinalg.c index 5c66b306..c8b072d1 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -23,6 +23,7 @@ void linalg_raiseerror(vm *v, linalgError_t err) { case LINALGERR_LAPACK_INVLD_ARGS: morpho_runtimeerror(v, LINALG_LAPACK_ARGS); break; case LINALGERR_OP_FAILED: morpho_runtimeerror(v, LINALG_OPFAILED); break; case LINALGERR_NOT_SUPPORTED: morpho_runtimeerror(v, LINALG_NOTSUPPORTED); break; + case LINALGERR_NON_NUMERICAL: morpho_runtimeerror(v, LINALG_NNNMRCL_ARG); break; case LINALGERR_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; } } @@ -42,6 +43,7 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_OPFAILED, ERROR_HALT, LINALG_OPFAILED_MSG); morpho_defineerror(LINALG_NOTSUPPORTED, ERROR_HALT, LINALG_NOTSUPPORTED_MSG); morpho_defineerror(LINALG_INVLDARGS, ERROR_HALT, LINALG_INVLDARGS_MSG); + morpho_defineerror(LINALG_NNNMRCL_ARG, ERROR_HALT, LINALG_NNNMRCL_ARG_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index 365501df..670f9bf1 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -24,6 +24,7 @@ typedef enum { LINALGERR_LAPACK_INVLD_ARGS, // Invalid arguments to LAPACK routine LINALGERR_OP_FAILED, // Matrix operation failed LINALGERR_NOT_SUPPORTED, // Operation not supported for this matrix type + LINALGERR_NON_NUMERICAL, // Non numerical args supplied LINALGERR_ALLOC // Memory allocation failed } linalgError_t; @@ -55,6 +56,9 @@ typedef enum { #define LINALG_INVLDARGS "LnAlgMtrxInvldArg" #define LINALG_INVLDARGS_MSG "Invalid arguments to matrix method." +#define LINALG_NNNMRCL_ARG "LnAlgMtrxNnNmrclArg" +#define LINALG_NNNMRCL_ARG_MSG "Matrix method requires numerical arguments." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 87b62200..dd35ac3b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -36,6 +36,15 @@ static value _getelfn(vm *v, double *el) { return morpho_wrapandbind(v, (object *) new); } +static linalgError_t _setelfn(vm *v, value in, double *el) { + if (MORPHO_ISCOMPLEX(in)) { + *((MorphoComplex *) el) = MORPHO_GETCOMPLEX(in)->Z; + } else if (morpho_valuetofloat(in, el)) { + el[1] = 0.0; // Set real part to zero + } else return LINALGERR_NON_NUMERICAL; + return LINALGERR_OK; +} + /** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -161,6 +170,7 @@ linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { matrixinterfacedefn complexmatrixdefn = { .printelfn = _printelfn, .getelfn = _getelfn, + .setelfn = _setelfn, .solvefn = _solve, .eigenfn = _eigen }; @@ -241,38 +251,14 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { return out; } -/* --------- - * setIndex() - * --------- */ - -static value _setindex(vm *v, objectcomplexmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { - if (MORPHO_ISCOMPLEX(in)) { - LINALG_ERRCHECKVM(complexmatrix_setelement(m, i, j, MORPHO_GETCOMPLEX(in)->Z)); - } - return MORPHO_NIL; -} - -value ComplexMatrix_setindex__int_x(vm *v, int nargs, value *args) { - objectcomplexmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _setindex(v, m, i, 0, MORPHO_GETARG(args, 1)); -} - -value ComplexMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { - objectcomplexmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _setindex(v, m, i, j, MORPHO_GETARG(args, 2)); -} - MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int, Complex)", ComplexMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int, Complex)", ComplexMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 64e6423f..6070d704 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -74,6 +74,11 @@ static value _getelfn(vm *v, double *el) { return MORPHO_FLOAT(*el); } +static linalgError_t _setelfn(vm *v, value in, double *el) { + if (!morpho_valuetofloat(in, el)) return LINALGERR_NON_NUMERICAL; + return LINALGERR_OK; +} + /** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -332,7 +337,7 @@ linalgError_t xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { /** Solve the linear system a.x = b; automatrically allocates storage depending on size of the matrix * @param[in] a lhs * @param[in|out] b rhs — overwritten by the solution - * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. */ + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { if (MATRIX_ISSMALL(a)) return xmatrix_solvesmall(a, b); else return xmatrix_solvelarge(a, b); @@ -402,6 +407,7 @@ void xmatrix_print(vm *v, objectxmatrix *m) { matrixinterfacedefn xmatrixdefn = { .printelfn = _printelfn, .getelfn = _getelfn, + .setelfn = _setelfn, .solvefn = _solve, .eigenfn = _eigen }; @@ -497,22 +503,21 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { * setindex() * --------- */ -value _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { - double val=0.0; - if (!morpho_valuetofloat(in, &val)) true; // TODO: Should raise an error (Matrix doesn't!) - LINALG_ERRCHECKVM(xmatrix_setelement(m, i, j, val)); - return MORPHO_NIL; +static void _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { + double *elptr=NULL; + LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); + if (elptr) LINALG_ERRCHECKVM(xmatrix_getinterface(m)->setelfn(v, in, elptr)); } value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); + _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); } value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); + _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); } /* --------- @@ -826,7 +831,7 @@ value XMatrix_inner(vm *v, int nargs, value *args) { /** Reshape a matrix */ value XMatrix_reshape(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); diff --git a/src/xmatrix.h b/src/xmatrix.h index 44bc4195..8db0c24b 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -61,6 +61,9 @@ typedef void (*xmatrix_printelfn_t) (vm *, double *); /** Function that materializes a value from a pointer to an element */ typedef value (*xmatrix_getelfn_t) (vm *, double *); +/** Function that sets the an element given a value */ +typedef linalgError_t (*xmatrix_setelfn_t) (vm *, value, double *); + /** Function that solves the linear system a.x = b * @param[in|out] a - lhs; overwritten by LU decomposition * @param[in|out] b - rhs; overwritten by solution @@ -75,15 +78,12 @@ typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *a, objectxmatrix *b, * @returns a matrix error code */ typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec); -/** Function that sets a given entry given a value */ -//typedef void (*xmatrix_setfn_t) (objectxmatrix *, void *, value v); - typedef struct { xmatrix_printelfn_t printelfn; xmatrix_getelfn_t getelfn; + xmatrix_setelfn_t setelfn; xmatrix_solvefn_t solvefn; xmatrix_eigenfn_t eigenfn; -// xmatrix_setfn_t setfn; } matrixinterfacedefn; void xmatrix_addinterface(matrixinterfacedefn *defn); @@ -111,36 +111,40 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); void xmatrix_initialize(void); -value XMatrix_print(vm *v, int nargs, value *args); -value XMatrix_assign(vm *v, int nargs, value *args); -value XMatrix_clone(vm *v, int nargs, value *args); - -value XMatrix_index__int(vm *v, int nargs, value *args); -value XMatrix_index__int_int(vm *v, int nargs, value *args); - -value XMatrix_getcolumn__int(vm *v, int nargs, value *args); -value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args); - -value XMatrix_add__xmatrix(vm *v, int nargs, value *args); -value XMatrix_add__nil(vm *v, int nargs, value *args); -value XMatrix_add__x(vm *v, int nargs, value *args); -value XMatrix_sub__xmatrix(vm *v, int nargs, value *args); -value XMatrix_sub__x(vm *v, int nargs, value *args); -value XMatrix_subr__x(vm *v, int nargs, value *args); -value XMatrix_mul__float(vm *v, int nargs, value *args); -value XMatrix_div__float(vm *v, int nargs, value *args); -value XMatrix_div__xmatrix(vm *v, int nargs, value *args); -value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args); - -value XMatrix_transpose(vm *v, int nargs, value *args); - -value XMatrix_eigenvalues(vm *v, int nargs, value *args); -value XMatrix_eigensystem(vm *v, int nargs, value *args); - -value XMatrix_reshape(vm *v, int nargs, value *args); -value XMatrix_enumerate(vm *v, int nargs, value *args); -value XMatrix_count(vm *v, int nargs, value *args); -value XMatrix_dimensions(vm *v, int nargs, value *args); +#define IMPLEMENTATIONFN(fn) value fn (vm *v, int nargs, value *args) + +IMPLEMENTATIONFN(XMatrix_print); +IMPLEMENTATIONFN(XMatrix_assign); +IMPLEMENTATIONFN(XMatrix_clone); + +IMPLEMENTATIONFN(XMatrix_index__int); +IMPLEMENTATIONFN(XMatrix_index__int_int); +IMPLEMENTATIONFN(XMatrix_setindex__int_x); +IMPLEMENTATIONFN(XMatrix_setindex__int_int_x); + +IMPLEMENTATIONFN(XMatrix_getcolumn__int); +IMPLEMENTATIONFN(XMatrix_setcolumn__int_xmatrix); + +IMPLEMENTATIONFN(XMatrix_add__xmatrix); +IMPLEMENTATIONFN(XMatrix_add__nil); +IMPLEMENTATIONFN(XMatrix_add__x); +IMPLEMENTATIONFN(XMatrix_sub__xmatrix); +IMPLEMENTATIONFN(XMatrix_sub__x); +IMPLEMENTATIONFN(XMatrix_subr__x); +IMPLEMENTATIONFN(XMatrix_mul__float); +IMPLEMENTATIONFN(XMatrix_div__float); +IMPLEMENTATIONFN(XMatrix_div__xmatrix); +IMPLEMENTATIONFN(XMatrix_acc__x_xmatrix); + +IMPLEMENTATIONFN(XMatrix_transpose); +IMPLEMENTATIONFN(XMatrix_eigenvalues); +IMPLEMENTATIONFN(XMatrix_eigensystem); +IMPLEMENTATIONFN(XMatrix_reshape); +IMPLEMENTATIONFN(XMatrix_enumerate); +IMPLEMENTATIONFN(XMatrix_count); +IMPLEMENTATIONFN(XMatrix_dimensions); + +#undef DECLARE_IMPLEMENTATIONFN /* ------------------------------------------------------- * Interface diff --git a/test/index/complexmatrix_setindex_real.morpho b/test/index/complexmatrix_setindex_real.morpho new file mode 100644 index 00000000..d6ed6f9e --- /dev/null +++ b/test/index/complexmatrix_setindex_real.morpho @@ -0,0 +1,16 @@ +// Set elements of a ComplexMatrix with mixture of Complex and Real args + +import newlinalg + +var A = ComplexMatrix(2,2) + +// Set using two indices +A[0,0] = 1+im // Make sure imag part is zero'd out +A[0,0] = 1 +A[0,1] = 2+2im +A[1,0] = 3.0 +A[1,1] = 4+4im + +print A +// expect: [ 1 + 0im 2 + 2im ] +// expect: [ 3 + 0im 4 + 4im ] From a2103d94b3fe09e6c4bd539158072eb916f78ab7 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 10:48:06 -0500 Subject: [PATCH 047/156] Matrix roll --- src/xcomplexmatrix.c | 2 + src/xmatrix.c | 71 +++++++++++++++++++++++++- src/xmatrix.h | 3 ++ test/methods/complexmatrix_roll.morpho | 51 ++++++++++++++++++ test/methods/matrix_roll.morpho | 51 ++++++++++++++++++ 5 files changed, 177 insertions(+), 1 deletion(-) create mode 100644 test/methods/complexmatrix_roll.morpho create mode 100644 test/methods/matrix_roll.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index dd35ac3b..da019f1f 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -283,6 +283,8 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) diff --git a/src/xmatrix.c b/src/xmatrix.c index 6070d704..cd8dcb2e 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -400,6 +400,52 @@ void xmatrix_print(vm *v, objectxmatrix *m) { } } +/* ---------------------- + * Roll + * ---------------------- */ + +/** Rolls the matrix list */ +static void _rollflat(objectxmatrix *a, objectxmatrix *b, int nplaces) { + MatrixCount_t N=a->nrows*a->ncols*a->nvals; + MatrixCount_t n = abs(nplaces)*a->nvals; + if (n>N) n = n % N; + MatrixCount_t Np = N - n; // Number of elements to roll + + if (nplaces<0) { + memcpy(b->matrixdata, a->matrixdata+n, sizeof(double)*Np); + memcpy(b->matrixdata+Np, a->matrixdata, sizeof(double)*n); + } else { + memcpy(b->matrixdata+n, a->matrixdata, sizeof(double)*Np); + if (n>0) memcpy(b->matrixdata, a->matrixdata+Np, sizeof(double)*n); + } +} + +/** Copies a arow from matrix a into brow for matrix b */ +static void _copyrow(objectxmatrix *a, MatrixIdx_t arow, objectxmatrix *b, MatrixIdx_t brow) { + for (MatrixIdx_t i=0; incols; i++) + for (int k=0; knvals; k++) + b->elements[b->nvals*(i*b->nrows+brow)+k]=a->elements[a->nvals*(i*a->nrows+arow)+k]; +} + +/** Rolls a list by a number of elements along a given axis; stores the result in b */ +linalgError_t xmatrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatrix *b) { + if (!(a->nrows==b->nrows && a->ncols==b->ncols && a->nvals==b->nvals)) return LINALGERR_INCOMPATIBLE_DIM; + + switch(axis) { + case 0: + for (int i=0; inrows; i++) { + int j = (i+nplaces); + while (j<0) j+=a->nrows; + _copyrow(a, i, b, j % a->nrows); + } + break; + case 1: _rollflat(a, b, nplaces*a->nrows); break; + default: return LINALGERR_NOT_SUPPORTED; + } + + return LINALGERR_OK; +} + /* ********************************************************************** * Interface definition * ********************************************************************** */ @@ -733,7 +779,7 @@ value XMatrix_transpose(vm *v, int nargs, value *args) { return out; } -bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { +static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { value ev[n]; for (int i=0; i Date: Wed, 24 Dec 2025 10:57:48 -0500 Subject: [PATCH 048/156] Use memcpy for speed --- src/xmatrix.c | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index cd8dcb2e..3405b55f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -423,8 +423,7 @@ static void _rollflat(objectxmatrix *a, objectxmatrix *b, int nplaces) { /** Copies a arow from matrix a into brow for matrix b */ static void _copyrow(objectxmatrix *a, MatrixIdx_t arow, objectxmatrix *b, MatrixIdx_t brow) { for (MatrixIdx_t i=0; incols; i++) - for (int k=0; knvals; k++) - b->elements[b->nvals*(i*b->nrows+brow)+k]=a->elements[a->nvals*(i*a->nrows+arow)+k]; + memcpy(b->elements+b->nvals*(i*b->nrows+brow), a->elements+a->nvals*(i*a->nrows+arow), sizeof(double)*a->nvals); } /** Rolls a list by a number of elements along a given axis; stores the result in b */ From dd74b9950672397b3fa9b505b91494e98a9a7d99 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 12:34:28 -0500 Subject: [PATCH 049/156] Matrix sum --- src/xcomplexmatrix.c | 3 +- src/xmatrix.c | 45 +++++++++++++++++++++------ src/xmatrix.h | 1 + test/methods/complexmatrix_sum.morpho | 13 ++++++++ test/methods/matrix_sum.morpho | 13 ++++++++ 5 files changed, 64 insertions(+), 11 deletions(-) create mode 100644 test/methods/complexmatrix_sum.morpho create mode 100644 test/methods/matrix_sum.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index da019f1f..cef4407b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -277,9 +277,10 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div_ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 3405b55f..57b18e3d 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -291,6 +291,21 @@ double xmatrix_linfnorm(objectxmatrix *a) { return a->elements[imax]; } +/** Computes the sum of all elements in a matrix */ +void xmatrix_sum(objectxmatrix *a, double *sum) { + double c[a->nvals], y, t; + for (int i=0; invals; i++) { sum[i]=0; c[i]=0; } + + for (MatrixCount_t i=0; inels; i+=a->nvals) { + for (int k=0; knvals; k++) { + y=a->elements[i+k]-c[k]; + t=sum[k]+y; + c[k]=(t-sum[k])-y; + sum[k]=t; + } + } +} + /** Calculate the trace of a matrix */ linalgError_t xmatrix_trace(objectxmatrix *a, double *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; @@ -742,6 +757,15 @@ value XMatrix_norm(vm *v, int nargs, value *args) { return MORPHO_FLOAT(xmatrix_norm(a)); } +/** Sums all matrix values */ +value XMatrix_sum(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + double sum[a->nvals]; + + xmatrix_sum(a, sum); + return xmatrix_getinterface(a)->getelfn(v, sum); +} + /** Computes the trace */ value XMatrix_trace(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -751,29 +775,29 @@ value XMatrix_trace(vm *v, int nargs, value *args) { } /** Inverts a matrix */ -value XMatrix_inverse(vm *v, int nargs, value *args) { +value XMatrix_transpose(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; objectxmatrix *new = xmatrix_clone(a); + if (new) { + new->ncols=a->nrows; + new->nrows=a->ncols; + LINALG_ERRCHECKVM(xmatrix_transpose(a, new)); + } out = morpho_wrapandbind(v, (object *) new); - if (new) LINALG_ERRCHECKVM(xmatrix_inverse(new)); return out; } /** Inverts a matrix */ -value XMatrix_transpose(vm *v, int nargs, value *args) { +value XMatrix_inverse(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; objectxmatrix *new = xmatrix_clone(a); - if (new) { - new->ncols=a->nrows; - new->nrows=a->ncols; - LINALG_ERRCHECKVM(xmatrix_transpose(a, new)); - } out = morpho_wrapandbind(v, (object *) new); + if (new) LINALG_ERRCHECKVM(xmatrix_inverse(new)); return out; } @@ -968,12 +992,13 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__floa MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "XMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 3da60b46..01f757c6 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -137,6 +137,7 @@ IMPLEMENTATIONFN(XMatrix_div__float); IMPLEMENTATIONFN(XMatrix_div__xmatrix); IMPLEMENTATIONFN(XMatrix_acc__x_xmatrix); +IMPLEMENTATIONFN(XMatrix_sum); IMPLEMENTATIONFN(XMatrix_transpose); IMPLEMENTATIONFN(XMatrix_eigenvalues); IMPLEMENTATIONFN(XMatrix_eigensystem); diff --git a/test/methods/complexmatrix_sum.morpho b/test/methods/complexmatrix_sum.morpho new file mode 100644 index 00000000..3354d422 --- /dev/null +++ b/test/methods/complexmatrix_sum.morpho @@ -0,0 +1,13 @@ +// Sum +import newlinalg + +var A = ComplexMatrix(3,2) +A[0,0]=1+im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im +A[2,0]=5+5im +A[2,1]=6+6im + +print A.sum() +// expect: 21 + 21im diff --git a/test/methods/matrix_sum.morpho b/test/methods/matrix_sum.morpho new file mode 100644 index 00000000..68294074 --- /dev/null +++ b/test/methods/matrix_sum.morpho @@ -0,0 +1,13 @@ +// Sum +import newlinalg + +var A = XMatrix(3,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 +A[2,0]=5 +A[2,1]=6 + +print A.sum() +// expect: 21 From c1ad48b47071c8c831b89900d307b2aec8196162 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 13:56:11 -0500 Subject: [PATCH 050/156] Formatted output --- src/xcomplexmatrix.c | 36 ++++++++----- src/xmatrix.c | 68 +++++++++++++++++++----- src/xmatrix.h | 9 ++++ test/methods/complexmatrix_format.morpho | 13 +++++ test/methods/matrix_format.morpho | 13 +++++ 5 files changed, 114 insertions(+), 25 deletions(-) create mode 100644 test/methods/complexmatrix_format.morpho create mode 100644 test/methods/matrix_format.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index cef4407b..1ba9659b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -12,6 +12,7 @@ #include "newlinalg.h" #include "xmatrix.h" #include "xcomplexmatrix.h" +#include "format.h" objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype @@ -31,6 +32,15 @@ static void _printelfn(vm *v, double *el) { complex_print(v, &cmplx); } +static bool _printeltobufffn(varray_char *out, char *format, double *el) { // TODO: format should support complex numbers + if (!format_printtobuffer(MORPHO_FLOAT(el[0]), format, out)) return false; + varray_charadd(out, " ", 1); + varray_charadd(out, (el[1]<0 ? "-" : "+"), 1); + if (!format_printtobuffer(MORPHO_FLOAT(fabs(el[1])), format, out)) return false; + varray_charadd(out, "im", 2); + return true; +} + static value _getelfn(vm *v, double *el) { objectcomplex *new = object_newcomplex(el[0], el[1]); return morpho_wrapandbind(v, (object *) new); @@ -73,6 +83,19 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/* ---------------------- + * Interface definition + * ---------------------- */ + +matrixinterfacedefn complexmatrixdefn = { + .printelfn = _printelfn, + .printeltobufffn = _printeltobufffn, + .getelfn = _getelfn, + .setelfn = _setelfn, + .solvefn = _solve, + .eigenfn = _eigen +}; + /* ---------------------- * Constructor * ---------------------- */ @@ -163,18 +186,6 @@ linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } -/* ********************************************************************** - * Interface definition - * ********************************************************************** */ - -matrixinterfacedefn complexmatrixdefn = { - .printelfn = _printelfn, - .getelfn = _getelfn, - .setelfn = _setelfn, - .solvefn = _solve, - .eigenfn = _eigen -}; - /* ********************************************************************** * ComplexMatrix constructors * ********************************************************************** */ @@ -253,6 +264,7 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 57b18e3d..601f7bb2 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -8,6 +8,7 @@ #define MORPHO_INCLUDE_LINALG #include "newlinalg.h" +#include "format.h" /* ********************************************************************** * Matrix interface definitions @@ -62,7 +63,7 @@ objecttypedefn objectxmatrixdefn = { * ********************************************************************** */ /* ---------------------- - * XMatrix callbacks + * XMatrix interface * ---------------------- */ static void _printelfn(vm *v, double *el) { @@ -70,6 +71,10 @@ static void _printelfn(vm *v, double *el) { morpho_printf(v, "%g", (fabs(val)0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/* ---------------------- + * Interface definition + * ---------------------- */ + +matrixinterfacedefn xmatrixdefn = { + .printelfn = _printelfn, + .printeltobufffn = _printeltobufffn, + .getelfn = _getelfn, + .setelfn = _setelfn, + .solvefn = _solve, + .eigenfn = _eigen +}; + /* ---------------------- * Constructors * ---------------------- */ @@ -415,6 +433,24 @@ void xmatrix_print(vm *v, objectxmatrix *m) { } } +/** Prints a matrix to a buffer */ +bool xmatrix_printtobuffer(objectxmatrix *m, char *format, varray_char *out) { + matrixinterfacedefn *interface=xmatrix_getinterface(m); + double *elptr; + for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m + varray_charadd(out, "[ ", 2); + + for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k + xmatrix_getelementptr(m, i, j, &elptr); + if (!(*interface->printeltobufffn) (out, format, elptr)) return false; + varray_charadd(out, " ", 1); + } + varray_charadd(out, "]", 1); + if (inrows-1) varray_charadd(out, "\n", 1); + } + return true; +} + /* ---------------------- * Roll * ---------------------- */ @@ -460,18 +496,6 @@ linalgError_t xmatrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatri return LINALGERR_OK; } -/* ********************************************************************** - * Interface definition - * ********************************************************************** */ - -matrixinterfacedefn xmatrixdefn = { - .printelfn = _printelfn, - .getelfn = _getelfn, - .setelfn = _setelfn, - .solvefn = _solve, - .eigenfn = _eigen -}; - /* ********************************************************************** * XMatrix constructors * ********************************************************************** */ @@ -518,6 +542,23 @@ value XMatrix_print(vm *v, int nargs, value *args) { return MORPHO_NIL; } +/** Formatted conversion to a string */ +value XMatrix_format(vm *v, int nargs, value *args) { + value out=MORPHO_NIL; + varray_char str; + varray_charinit(&str); + + if (xmatrix_printtobuffer(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), + &str)) { + out = object_stringfromvarraychar(&str); + if (MORPHO_ISOBJECT(out)) morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + + varray_charclear(&str); + return out; +} + /** Copies the contents of one matrix into another */ value XMatrix_assign(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -969,6 +1010,7 @@ value XMatrix_dimensions(vm *v, int nargs, value *args) { MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 01f757c6..b05446a0 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -58,6 +58,13 @@ typedef struct { /** Function that prints a single matrix element */ typedef void (*xmatrix_printelfn_t) (vm *, double *); +/** Function that prints a single matrix element to a text buffer + * @param[in] out - buffer to write to + * @param[in] format - format string + * @param[in] el - pointer to matrix element data + * @returns true on success */ +typedef bool (*xmatrix_printeltobufffn_t) (varray_char *out, char *format, double *el); + /** Function that materializes a value from a pointer to an element */ typedef value (*xmatrix_getelfn_t) (vm *, double *); @@ -80,6 +87,7 @@ typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, typedef struct { xmatrix_printelfn_t printelfn; + xmatrix_printeltobufffn_t printeltobufffn; xmatrix_getelfn_t getelfn; xmatrix_setelfn_t setelfn; xmatrix_solvefn_t solvefn; @@ -115,6 +123,7 @@ void xmatrix_initialize(void); #define IMPLEMENTATIONFN(fn) value fn (vm *v, int nargs, value *args) IMPLEMENTATIONFN(XMatrix_print); +IMPLEMENTATIONFN(XMatrix_format); IMPLEMENTATIONFN(XMatrix_assign); IMPLEMENTATIONFN(XMatrix_clone); diff --git a/test/methods/complexmatrix_format.morpho b/test/methods/complexmatrix_format.morpho new file mode 100644 index 00000000..d5f830dd --- /dev/null +++ b/test/methods/complexmatrix_format.morpho @@ -0,0 +1,13 @@ +// Format +import newlinalg +import constants + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=exp(im*Pi/4) +A[1,0]=exp(-im*Pi/4) +A[1,1]=-1.5*(1+1im) + +print A.format("%5.2f") +// expect: [ 1.00 + 1.00im 0.71 + 0.71im ] +// expect: [ 0.71 - 0.71im -1.50 - 1.50im ] diff --git a/test/methods/matrix_format.morpho b/test/methods/matrix_format.morpho new file mode 100644 index 00000000..591c6c76 --- /dev/null +++ b/test/methods/matrix_format.morpho @@ -0,0 +1,13 @@ +// Format +import newlinalg +import constants + +var A = XMatrix(2,2) +A[0,0]=1 +A[0,1]=Pi/2 +A[1,0]=Pi/2 +A[1,1]=-1.5 + +print A.format("%5.2f") +// expect: [ 1.00 1.57 ] +// expect: [ 1.57 -1.50 ] From 553f59fa3bdc0912ab22545ca6e5a1ca70521f69 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 16:33:39 -0500 Subject: [PATCH 051/156] Add test script --- .gitignore | 1 + src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 20 ++-- test/test.py | 212 +++++++++++++++++++++++++++++++++++++++++++ 4 files changed, 225 insertions(+), 10 deletions(-) create mode 100755 test/test.py diff --git a/.gitignore b/.gitignore index e4e9d09e..a11109e1 100644 --- a/.gitignore +++ b/.gitignore @@ -2,3 +2,4 @@ *.DS_Store build/* build-xcode/* +test/FailedTests.txt diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 1ba9659b..279ec48a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -299,7 +299,7 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BU MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/src/xmatrix.c b/src/xmatrix.c index 601f7bb2..e77a1ccd 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -613,12 +613,14 @@ static void _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, val value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); + return MORPHO_NIL; } value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); + return MORPHO_NIL; } /* --------- @@ -1013,8 +1015,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSE MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), @@ -1035,19 +1037,19 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xma MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "XMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/test/test.py b/test/test.py new file mode 100755 index 00000000..7fdaad27 --- /dev/null +++ b/test/test.py @@ -0,0 +1,212 @@ +#!/usr/bin/env python3 +# Simple automated testing +# T J Atherton Sept 2020 +# +# Each input file is supplied to a test command, the results +# are piped to a file and the output is compared with expectations +# extracted from the input file. +# Expectations are coded into comments in the input file as follows: + +# import necessary modules +import os, glob, sys +import regex as rx +from functools import reduce +import operator +import colored +from colored import stylize + +# define what command to use to invoke the interpreter +command = 'morpho6' + +# define the file extension to test +ext = 'morpho' + +# We reduce any errors to this value +err = '@error' + +# We reduce any stacktrace lines to this values +stk = '@stacktrace' + +# Removes control characters +def remove_control_characters(str): + return rx.sub(r'\x1b[^m]*m', '', str.rstrip()) + +# Simplify error reports +def simplify_errors(str): + # this monster regex extraxts NAME from error messages of the form error ... 'NAME' + return rx.sub('.*[E|e]rror[ :]*\'([A-z;a-z]*)\'.*', err+'[\\1]', str.rstrip()) + +# Simplify stacktrace +def simplify_stacktrace(str): + return rx.sub(r'.*at line.*', stk, str.rstrip()) + +# Find an expected value +def findvalue(str): + return rx.findall(r'// expect: ?(.*)', str) + +# Find an expected error +def finderror(str): + #return rx.findall(r'\/\/ expect ?(.*) error', str) + return rx.findall(r'.*[E|e]rror[ :].*?(.*)', str) + +# Find an expected error +def iserror(str): + #return rx.findall(r'\/\/ expect ?(.*) error', str) + test=rx.findall(r'@error.*', str) + return len(test)>0 + +# Find an expected error +def isin(str): + #return rx.findall(r'\/\/ expect ?(.*) error', str) + test=rx.findall(r'.*in .*', str) + return len(test)>0 + +# Remove elements from a list +def remove(list, remove_list): + test_list = list + for i in remove_list: + try: + test_list.remove(i) + except ValueError: + pass + return test_list + +# Find what is expected +def findexpected(str): + out = finderror(str) # is it an error? + if (out!=[]): + out = [simplify_errors(str)] # if so, simplify it + else: + out = findvalue(str) # or something else? + return out + +# Works out what we expect from the input file +def getexpect(filepath): + # Load the file + file_object = open(filepath, 'r', encoding="utf8") + lines = file_object.readlines() + file_object.close() + #Find any expected values over all lines + if (lines != []): + out = list(map(findexpected, lines)) + out = reduce(operator.concat, out) + else: + out = [] + return out + +# Gets the output generated +def getoutput(filepath): + # Load the file + file_object = open(filepath, 'r', encoding="utf8") + lines = file_object.readlines() + file_object.close() + # remove all control characters + lines = list(map(remove_control_characters, lines)) + # Convert errors to our universal error code + lines = list(map(simplify_errors, lines)) + # Identify stack trace lines + lines = list(map(simplify_stacktrace, lines)) + for i in range(len(lines)-1): + if (iserror(lines[i])): + if (isin(lines[i+1])): + lines[i+1]=stk + # and remove them + return list(filter(lambda x: x!=stk, lines)) + +# Test a file +def test(file,testLog,CI): + ret = 0 + if not CI: + print(file+":", end=" ") + + # Create a temporary file in the same directory + tmp = file + '.out' + + #Get the expected output + expected=getexpect(file) + + # Run the test + os.system(command + ' ' +file + ' > ' + tmp) + + # If we produced output + if os.path.exists(tmp): + # Get the output + out=getoutput(tmp) + + # Was it expected? + if(expected==out): + if not CI: + print(stylize("Passed",colored.fg("green"))) + ret = 1 + else: + if not CI: + print(stylize("Failed",colored.fg("red"))) + print(" Expected: ", expected) + print(" Output: ", out) + else: + print("\n::error file = {",file,"}::{",file," Failed}") + + + #also print to the test log + print(file+":", end=" ",file = testLog) + print("Failed", file = testLog) + + if len(out) == len(expected): + failedTests = list(i for i in range(len(out)) if expected[i] != out[i]) + print("Tests " + str(failedTests) + " did not match expected results.", file = testLog) + for testNum in failedTests: + print("Test "+str(testNum), file = testLog) + print(" Expected: ", expected[testNum], file = testLog) + print(" Output: ", out[testNum], file = testLog) + else: + print(" Expected: ", expected, file = testLog) + print(" Output: ", out, file = testLog) + + + print("\n",file = testLog) + + + # Delete the temporary file + os.remove(tmp) + + return ret + +print('--Begin testing---------------------') + +# open a test log +# write failures to log +success=0 # number of successful tests +total=0 # total number of tests + +# look for a command line arguement that says +# this is being run for continous integration +CI = False +# Also look for a command line argument that says this is being run with multiple threads +MT = False +for arg in sys.argv: + if arg == '-c': # if the argument is -c, then we are running in CI mode + CI = True + if arg == '-m': # if the argument is -m, then we are running in multi-thread mode + MT = True + +failedTestsFileName = "FailedTests.txt" +if MT: + failedTestsFileName = "FailedTestsMultiThreaded.txt" + command += " -w4" + print("Running tests with 4 threads") + +files=glob.glob('**/**.'+ext, recursive=True) +with open(failedTestsFileName,'w', encoding="utf8") as testLog: + + for f in files: + # print(f) + success+=test(f,testLog,CI) + total+=1 + +# if (not CI) and (not success == total): +# os.system("emacs FailedTests.txt &") + +print('--End testing-----------------------') +print(success, 'out of', total, 'tests passed.') +if CI and success Date: Wed, 24 Dec 2025 19:12:55 -0500 Subject: [PATCH 052/156] Fixes to test suite --- src/xcomplexmatrix.c | 6 +- src/xmatrix.c | 87 +++++++++++++++++- test/arithmetic/matrix_acc.morpho | 2 + test/complexmatrix.morpho | 89 ------------------- .../matrix_array_constructor.morpho | 16 ++++ .../matrix_tuple_constructor.morpho | 16 ++++ .../complexmatrix_non_square_error.morpho | 2 +- test/methods/complexmatrix_eigensystem.morpho | 10 ++- test/methods/complexmatrix_eigenvalues.morpho | 2 - test/methods/complexmatrix_reshape.morpho | 7 +- test/methods/matrix_eigensystem.morpho | 6 +- test/methods/matrix_eigenvalues.morpho | 2 +- test/methods/matrix_enumerate.morpho | 4 +- test/methods/matrix_reshape.morpho | 7 +- test/newlinalg.morpho | 24 ----- 15 files changed, 148 insertions(+), 132 deletions(-) delete mode 100644 test/complexmatrix.morpho create mode 100644 test/constructors/matrix_array_constructor.morpho create mode 100644 test/constructors/matrix_tuple_constructor.morpho delete mode 100644 test/newlinalg.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 279ec48a..0662dd51 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -282,10 +282,10 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMat MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index e77a1ccd..6875ace8 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -508,10 +508,86 @@ value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +/** Clones a matrix */ +value xmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + return morpho_wrapandbind(v, (object *) xmatrix_clone(a)); +} + +static bool _getelement(value v, int i, value *out) { + if (MORPHO_ISLIST(v)) { + return list_getelement(MORPHO_GETLIST(v), i, out); + } else if (MORPHO_ISTUPLE(v)) { + return tuple_getelement(MORPHO_GETTUPLE(v), i, out); + } + return false; +} + +static bool _length(value v, int *len) { + if (MORPHO_ISLIST(v)) { + *len = list_length(MORPHO_GETLIST(v)); return true; + } else if (MORPHO_ISTUPLE(v)) { + *len = tuple_length(MORPHO_GETTUPLE(v)); return true; + } + return false; +} + +/** Constructs a matrix from a list of lists or tuples */ value xmatrix_constructor__list(vm *v, int nargs, value *args) { - return MORPHO_NIL; + value lst = MORPHO_GETARG(args, 0); + value iel, jel; + + int nrows=0, ncols=0, rlen; + _length(lst, &nrows); + for (int i=0; incols) { + ncols=rlen; + } + } + + objectxmatrix *new=xmatrix_new(nrows, ncols, true); + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + + for (int i=0; isetelfn(v, jel, new->elements+(j*ncols + i)*new->nvals); + } + } + } + + return morpho_wrapandbind(v, (object *) new); } +/** Constructs a matrix from a list of lists or tuples */ +value xmatrix_constructor__array(vm *v, int nargs, value *args) { + objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); + + if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); + int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); + + objectxmatrix *new=xmatrix_new(nrows, ncols, true); + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + + for (int i=0; isetelfn(v, el, new->elements+(j*ncols + i)*new->nvals); + } + } + } + + return morpho_wrapandbind(v, (object *) new); +} + + value xmatrix_constructor__err(vm *v, int nargs, value *args) { morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; @@ -1030,11 +1106,11 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xma MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "XMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (Float)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (Float)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, MORPHO_FN_PUREFN), @@ -1065,7 +1141,10 @@ void xmatrix_initialize(void) { object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (XMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Tuple)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Array)", xmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", xmatrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/test/arithmetic/matrix_acc.morpho b/test/arithmetic/matrix_acc.morpho index e1b4f035..e6430ebd 100644 --- a/test/arithmetic/matrix_acc.morpho +++ b/test/arithmetic/matrix_acc.morpho @@ -10,3 +10,5 @@ A[1,1]=1 A.acc(2,A) print A +// expect: [ 3 3 ] +// expect: [ 3 3 ] \ No newline at end of file diff --git a/test/complexmatrix.morpho b/test/complexmatrix.morpho deleted file mode 100644 index 84f566fe..00000000 --- a/test/complexmatrix.morpho +++ /dev/null @@ -1,89 +0,0 @@ - -import newlinalg -import constants - -var A = XMatrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -print A - -print A.norm() -print A.norm(1) -print A.norm(Inf) - -System.exit() - -var A = ComplexMatrix(2,2) -A[0,0] = 1+im -A[1,1] = 1-im -print A - -A.reshape(4,1) -print A - -System.exit() - -var b = ComplexMatrix(2,1) -b[0,0] = Complex(0.5,0) -b[1,0] = Complex(-0.5,0) -print b - -print b/A - -var A = XMatrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -var b = XMatrix(2,1) -b[0]=1 -b[1]=2 - -print A -print b - -print b/A - -print A - -var I = IdentityXMatrix(2) -print I - -var a = XMatrix(2,2) -a[0,0]=2 -a[1,1]=2 -print a -print a.dimensions() -print a.count() - -print a.inner(a) - -print 2*a - -var a = ComplexMatrix(2,2) -print a - -print a[0] -print a[0,0] - -a[0,0] = 1+im -a[1,1] = 1-im - -print a+a - -print a*3.0 - -print a*a - -Complex b = a[0,0] -print b - -var A = ComplexMatrix(2,1) -A[0,0] = 1+im -A[1,0] = 1-im - -print A.inner(A) \ No newline at end of file diff --git a/test/constructors/matrix_array_constructor.morpho b/test/constructors/matrix_array_constructor.morpho new file mode 100644 index 00000000..db235393 --- /dev/null +++ b/test/constructors/matrix_array_constructor.morpho @@ -0,0 +1,16 @@ +// Create a Matrix from a Tuple of Tuples + +import newlinalg + +var a[2,2] +a[0,0]=1 +a[1,0]=2 +a[0,1]=3 +a[1,1]=4 + +var A = XMatrix(a) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + diff --git a/test/constructors/matrix_tuple_constructor.morpho b/test/constructors/matrix_tuple_constructor.morpho new file mode 100644 index 00000000..48337f3f --- /dev/null +++ b/test/constructors/matrix_tuple_constructor.morpho @@ -0,0 +1,16 @@ +// Create a Matrix from a Tuple of Tuples + +import newlinalg + +var A = XMatrix(((1,2),(3,4))) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +// Mix Tuples and Lists +var B = XMatrix(([1,2],[3,4])) + +print B +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/errors/complexmatrix_non_square_error.morpho b/test/errors/complexmatrix_non_square_error.morpho index 16fb77df..37fe8049 100644 --- a/test/errors/complexmatrix_non_square_error.morpho +++ b/test/errors/complexmatrix_non_square_error.morpho @@ -1,4 +1,4 @@ -// Non-square matrix error (for operations requiring square matrices) +// Non-square matrix err. (for operations requiring square matrices) import newlinalg var A = ComplexMatrix(2,3) diff --git a/test/methods/complexmatrix_eigensystem.morpho b/test/methods/complexmatrix_eigensystem.morpho index 1cd107c4..ef8d5742 100644 --- a/test/methods/complexmatrix_eigensystem.morpho +++ b/test/methods/complexmatrix_eigensystem.morpho @@ -14,4 +14,12 @@ print es print es[0] // expect: (0 + 1im, 0 - 1im) -print es[1] +// Compare to analytical eigenvectors +var v = ComplexMatrix(2,2) +v[0,0]=sqrt(2)/2 +v[1,0]=sqrt(2)/2 +v[0,1]=sqrt(2)/2 +v[1,1]=-sqrt(2)/2 + +print abs((es[1]-v).sum()) < 1e-15 +// expect: true diff --git a/test/methods/complexmatrix_eigenvalues.morpho b/test/methods/complexmatrix_eigenvalues.morpho index d2244599..9a9adb81 100644 --- a/test/methods/complexmatrix_eigenvalues.morpho +++ b/test/methods/complexmatrix_eigenvalues.morpho @@ -7,7 +7,5 @@ A[0,1]=im A[1,0]=im A[1,1]=0+0im -print A - print A.eigenvalues() // expect: (0 + 1im, 0 - 1im) diff --git a/test/methods/complexmatrix_reshape.morpho b/test/methods/complexmatrix_reshape.morpho index e17789d9..5f60e09a 100644 --- a/test/methods/complexmatrix_reshape.morpho +++ b/test/methods/complexmatrix_reshape.morpho @@ -3,9 +3,12 @@ import newlinalg var A = ComplexMatrix(2,2) A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im +A[1,0]=2+2im +A[0,1]=3+3im A[1,1]=4+4im +print A +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 2 + 2im 4 + 4im ] A.reshape(4,1) print A diff --git a/test/methods/matrix_eigensystem.morpho b/test/methods/matrix_eigensystem.morpho index ea7dfd98..1651052c 100644 --- a/test/methods/matrix_eigensystem.morpho +++ b/test/methods/matrix_eigensystem.morpho @@ -10,7 +10,11 @@ A[1,1]=0 var es=A.eigensystem() print es +// expect: ((1, -1), ) print es[0] +// expect: (1, -1) -print es[1] +print es[1].format("%.2g") +// expect: [ 0.71 -0.71 ] +// expect: [ 0.71 0.71 ] diff --git a/test/methods/matrix_eigenvalues.morpho b/test/methods/matrix_eigenvalues.morpho index 430f25ba..00141abc 100644 --- a/test/methods/matrix_eigenvalues.morpho +++ b/test/methods/matrix_eigenvalues.morpho @@ -8,4 +8,4 @@ A[1,0]=1 A[1,1]=0 print A.eigenvalues() -// expect: (-1, 1) +// expect: (1, -1) diff --git a/test/methods/matrix_enumerate.morpho b/test/methods/matrix_enumerate.morpho index 8d2eabe2..ac2478cf 100644 --- a/test/methods/matrix_enumerate.morpho +++ b/test/methods/matrix_enumerate.morpho @@ -4,8 +4,8 @@ import newlinalg var A = XMatrix(2,2) A[0,0] = 1 -A[0,1] = 2 -A[1,0] = 3 +A[1,0] = 2 +A[0,1] = 3 A[1,1] = 4 for (x in A) print x diff --git a/test/methods/matrix_reshape.morpho b/test/methods/matrix_reshape.morpho index d6722d24..55355085 100644 --- a/test/methods/matrix_reshape.morpho +++ b/test/methods/matrix_reshape.morpho @@ -3,9 +3,12 @@ import newlinalg var A = XMatrix(2,2) A[0,0]=1 -A[0,1]=2 -A[1,0]=3 +A[1,0]=2 +A[0,1]=3 A[1,1]=4 +print A +// expect: [ 1 3 ] +// expect: [ 2 4 ] A.reshape(4,1) print A diff --git a/test/newlinalg.morpho b/test/newlinalg.morpho deleted file mode 100644 index 3e9176e2..00000000 --- a/test/newlinalg.morpho +++ /dev/null @@ -1,24 +0,0 @@ - -import newlinalg - -var a = XMatrix(2,1) -a[0]=1 -print a - -var b = XMatrix(2,2) -b[0,0]=1 -b[0,1]=2 -b[1,0]=3 -b[1,1]=4 - -print b -print b[0] -print b[0,0] - -print b+b - -print b-b - -var c = b.clone() - -print b+c From 9989535ba7b26a95968a14ee8454f7d86a56380c Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 19:31:50 -0500 Subject: [PATCH 053/156] Correct remaining test suite items --- src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 19 +++++-------------- .../complexmatrix_div_matrix.morpho | 13 ++++++------- .../complexmatrix_mul_matrix.morpho | 12 ++++++------ .../matrix_array_constructor.morpho | 4 ++-- test/index/complexmatrix_getindex.morpho | 8 ++++---- test/index/matrix_getindex.morpho | 8 ++++---- test/methods/complexmatrix_inner.morpho | 11 +++++------ 8 files changed, 33 insertions(+), 44 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 0662dd51..33590029 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -267,7 +267,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSE MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_index__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 6875ace8..2e4443b0 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -655,7 +655,10 @@ value XMatrix_clone(vm *v, int nargs, value *args) { * index() * --------- */ -static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { +value XMatrix_index__int_int(vm *v, int nargs, value *args) { + objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); value out=MORPHO_NIL; double *elptr=NULL; @@ -665,17 +668,6 @@ static value _getindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j) { return out; } -value XMatrix_index__int(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0); -} - -value XMatrix_index__int_int(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _getindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j); -} - /* --------- * setindex() * --------- */ @@ -1085,13 +1077,12 @@ value XMatrix_dimensions(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } - MORPHO_BEGINCLASS(XMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_index__int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), diff --git a/test/arithmetic/complexmatrix_div_matrix.morpho b/test/arithmetic/complexmatrix_div_matrix.morpho index a41a8967..0ca098a5 100644 --- a/test/arithmetic/complexmatrix_div_matrix.morpho +++ b/test/arithmetic/complexmatrix_div_matrix.morpho @@ -2,16 +2,15 @@ import newlinalg var A = ComplexMatrix(2,2) -A[0,0]=1+0im -A[0,1]=0+1im -A[1,0]=1+0im +A[0,0]=1 +A[0,1]=1-im +A[1,0]=1 A[1,1]=1+1im var b = ComplexMatrix(2,1) b[0,0]=1+1im -b[1,0]=2+0im +b[1,0]=2 print b / A -// expect: [ 1 + 0im ] -// expect: [ 1 + 1im ] - +// expect: [ 2 + 1im ] +// expect: [ -0.5 - 0.5im ] diff --git a/test/arithmetic/complexmatrix_mul_matrix.morpho b/test/arithmetic/complexmatrix_mul_matrix.morpho index 15fb9b0d..00f78a9f 100644 --- a/test/arithmetic/complexmatrix_mul_matrix.morpho +++ b/test/arithmetic/complexmatrix_mul_matrix.morpho @@ -8,12 +8,12 @@ A[1,0]=3+3im A[1,1]=4+4im var B = ComplexMatrix(2,2) -B[0,0]=1+0im -B[0,1]=0+1im -B[1,0]=1+0im -B[1,1]=0+1im +B[0,0]=1 +B[0,1]=1im +B[1,0]=-1im +B[1,1]=1 print A * B -// expect: [ 3 + 1im 2 + 3im ] -// expect: [ 7 + 3im 4 + 7im ] +// expect: [ 3 - 1im 1 + 3im ] +// expect: [ 7 - 1im 1 + 7im ] diff --git a/test/constructors/matrix_array_constructor.morpho b/test/constructors/matrix_array_constructor.morpho index db235393..b73ca7f1 100644 --- a/test/constructors/matrix_array_constructor.morpho +++ b/test/constructors/matrix_array_constructor.morpho @@ -4,8 +4,8 @@ import newlinalg var a[2,2] a[0,0]=1 -a[1,0]=2 -a[0,1]=3 +a[1,0]=3 +a[0,1]=2 a[1,1]=4 var A = XMatrix(a) diff --git a/test/index/complexmatrix_getindex.morpho b/test/index/complexmatrix_getindex.morpho index e833722f..344d5e6d 100644 --- a/test/index/complexmatrix_getindex.morpho +++ b/test/index/complexmatrix_getindex.morpho @@ -4,14 +4,14 @@ import newlinalg var A = ComplexMatrix(2,2) A[0,0] = 1+1im -A[0,1] = 2+2im -A[1,0] = 3+3im +A[1,0] = 2+2im +A[0,1] = 3+3im A[1,1] = 4+4im // Array-like access print A[0,0] // expect: 1 + 1im -print A[0,1] // expect: 2 + 2im -print A[1,0] // expect: 3 + 3im +print A[1,0] // expect: 2 + 2im +print A[0,1] // expect: 3 + 3im print A[1,1] // expect: 4 + 4im // Vector-like access diff --git a/test/index/matrix_getindex.morpho b/test/index/matrix_getindex.morpho index 7d8c16b8..90af1fd8 100644 --- a/test/index/matrix_getindex.morpho +++ b/test/index/matrix_getindex.morpho @@ -4,14 +4,14 @@ import newlinalg var A = XMatrix(2,2) A[0,0] = 1 -A[0,1] = 2 -A[1,0] = 3 +A[1,0] = 2 +A[0,1] = 3 A[1,1] = 4 // Array-like access print A[0,0] // expect: 1 -print A[0,1] // expect: 2 -print A[1,0] // expect: 3 +print A[1,0] // expect: 2 +print A[0,1] // expect: 3 print A[1,1] // expect: 4 // Vector-like access diff --git a/test/methods/complexmatrix_inner.morpho b/test/methods/complexmatrix_inner.morpho index f747e5a4..a9d6a7fe 100644 --- a/test/methods/complexmatrix_inner.morpho +++ b/test/methods/complexmatrix_inner.morpho @@ -8,11 +8,10 @@ A[1,0]=3+3im A[1,1]=4+4im var B = ComplexMatrix(2,2) -B[0,0]=1+0im -B[0,1]=0+1im -B[1,0]=1+0im -B[1,1]=0+1im +B[0,0]=1 +B[0,1]=1im +B[1,0]=-1im +B[1,1]=1 print A.inner(B) -// expect: 10 - 10im - +// expect: 4 - 6im From cd2d932e9261cceb0e6ab91b5c0d2aa5b07831f7 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 24 Dec 2025 19:33:42 -0500 Subject: [PATCH 054/156] Remove extraneous TODO --- src/xcomplexmatrix.c | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 33590029..0856c1e4 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -32,7 +32,7 @@ static void _printelfn(vm *v, double *el) { complex_print(v, &cmplx); } -static bool _printeltobufffn(varray_char *out, char *format, double *el) { // TODO: format should support complex numbers +static bool _printeltobufffn(varray_char *out, char *format, double *el) { if (!format_printtobuffer(MORPHO_FLOAT(el[0]), format, out)) return false; varray_charadd(out, " ", 1); varray_charadd(out, (el[1]<0 ? "-" : "+"), 1); From c8ddcbe898d08940a9be1ab5c6241fa7b1d6dffa Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 25 Dec 2025 09:50:12 -0500 Subject: [PATCH 055/156] ComplexMatrix constructors --- src/xcomplexmatrix.c | 19 +++ src/xmatrix.c | 132 ++++++++++-------- src/xmatrix.h | 4 + .../complexmatrix_array_constructor.morpho | 15 ++ .../complexmatrix_list_constructor.morpho | 9 ++ .../complexmatrix_tuple_constructor.morpho | 9 ++ .../matrix_array_constructor.morpho | 2 +- 7 files changed, 127 insertions(+), 63 deletions(-) create mode 100644 test/constructors/complexmatrix_array_constructor.morpho create mode 100644 test/constructors/complexmatrix_list_constructor.morpho create mode 100644 test/constructors/complexmatrix_tuple_constructor.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 0856c1e4..6763e752 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -198,6 +198,21 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +/** Constructs a complexmatrix from a list of lists or tuples */ +value complexmatrix_constructor__list(vm *v, int nargs, value *args) { + objectxmatrix *new = xmatrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); + return morpho_wrapandbind(v, (object *) new); +} + +/** Constructs a matrix from an array */ +value complexmatrix_constructor__array(vm *v, int nargs, value *args) { + objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); + if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + objectxmatrix *new = xmatrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); + return morpho_wrapandbind(v, (object *) new); +} + /* ********************************************************************** * ComplexMatrix veneer class * ********************************************************************** */ @@ -315,4 +330,8 @@ void complexmatrix_initialize(void) { object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); } diff --git a/src/xmatrix.c b/src/xmatrix.c index 2e4443b0..f73cf9f3 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -159,6 +159,73 @@ objectxmatrix *xmatrix_clone(objectxmatrix *in) { return new; } +static bool _getelement(value v, int i, value *out) { + if (MORPHO_ISLIST(v)) { + return list_getelement(MORPHO_GETLIST(v), i, out); + } else if (MORPHO_ISTUPLE(v)) { + return tuple_getelement(MORPHO_GETTUPLE(v), i, out); + } + return false; +} + +static bool _length(value v, int *len) { + if (MORPHO_ISLIST(v)) { + *len = list_length(MORPHO_GETLIST(v)); return true; + } else if (MORPHO_ISTUPLE(v)) { + *len = tuple_length(MORPHO_GETTUPLE(v)); return true; + } + return false; +} + +/** Create a matrix from a list of lists (or tuples) */ +objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { + value iel, jel; + + int nrows=0, ncols=0, rlen; + _length(lst, &nrows); + for (int i=0; incols) { + ncols=rlen; + } + } + + objectxmatrix *new=xmatrix_newwithtype(type, nrows, ncols, nvals, true); + if (!new) return NULL; + + for (int i=0; isetelfn(v, jel, new->elements+(j*ncols + i)*new->nvals); + } + } + } + + return new; +} + +/** Construct a matrix from an array */ +objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals) { + int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); + int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); + + objectxmatrix *new=xmatrix_newwithtype(type, nrows, ncols, nvals, true); + if (!new) return NULL; + + for (int i=0; isetelfn(v, el, new->elements+(j*ncols + i)*new->nvals); + } + } + } + return new; +} + /* ---------------------- * Accessing elements * ---------------------- */ @@ -514,80 +581,21 @@ value xmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) xmatrix_clone(a)); } -static bool _getelement(value v, int i, value *out) { - if (MORPHO_ISLIST(v)) { - return list_getelement(MORPHO_GETLIST(v), i, out); - } else if (MORPHO_ISTUPLE(v)) { - return tuple_getelement(MORPHO_GETTUPLE(v), i, out); - } - return false; -} - -static bool _length(value v, int *len) { - if (MORPHO_ISLIST(v)) { - *len = list_length(MORPHO_GETLIST(v)); return true; - } else if (MORPHO_ISTUPLE(v)) { - *len = tuple_length(MORPHO_GETTUPLE(v)); return true; - } - return false; -} - /** Constructs a matrix from a list of lists or tuples */ value xmatrix_constructor__list(vm *v, int nargs, value *args) { - value lst = MORPHO_GETARG(args, 0); - value iel, jel; - - int nrows=0, ncols=0, rlen; - _length(lst, &nrows); - for (int i=0; incols) { - ncols=rlen; - } - } - - objectxmatrix *new=xmatrix_new(nrows, ncols, true); - if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - - for (int i=0; isetelfn(v, jel, new->elements+(j*ncols + i)*new->nvals); - } - } - } - + objectxmatrix *new = xmatrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_XMATRIX, 1); return morpho_wrapandbind(v, (object *) new); } -/** Constructs a matrix from a list of lists or tuples */ +/** Constructs a matrix from an array */ value xmatrix_constructor__array(vm *v, int nargs, value *args) { objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); - if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); - int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); - - objectxmatrix *new=xmatrix_new(nrows, ncols, true); - if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - - for (int i=0; isetelfn(v, el, new->elements+(j*ncols + i)*new->nvals); - } - } - } - + objectxmatrix *new = xmatrix_arrayconstructor(v, a, OBJECT_XMATRIX, 1); return morpho_wrapandbind(v, (object *) new); } - value xmatrix_constructor__err(vm *v, int nargs, value *args) { morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; diff --git a/src/xmatrix.h b/src/xmatrix.h index b05446a0..207591e9 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -122,6 +122,8 @@ void xmatrix_initialize(void); #define IMPLEMENTATIONFN(fn) value fn (vm *v, int nargs, value *args) +IMPLEMENTATIONFN(xmatrix_constructor__xmatrix); + IMPLEMENTATIONFN(XMatrix_print); IMPLEMENTATIONFN(XMatrix_format); IMPLEMENTATIONFN(XMatrix_assign); @@ -165,6 +167,8 @@ IMPLEMENTATIONFN(XMatrix_dimensions); objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); objectxmatrix *xmatrix_clone(objectxmatrix *in); +objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); +objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); diff --git a/test/constructors/complexmatrix_array_constructor.morpho b/test/constructors/complexmatrix_array_constructor.morpho new file mode 100644 index 00000000..68f67b94 --- /dev/null +++ b/test/constructors/complexmatrix_array_constructor.morpho @@ -0,0 +1,15 @@ +// Create a Matrix from an Array + +import newlinalg + +var a[2,2] +a[0,0]=1+im +a[1,0]=2-2im +a[0,1]=3+3im +a[1,1]=4+4im + +var A = ComplexMatrix(a) + +print A +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 2 - 2im 4 + 4im ] diff --git a/test/constructors/complexmatrix_list_constructor.morpho b/test/constructors/complexmatrix_list_constructor.morpho new file mode 100644 index 00000000..8f39b5f0 --- /dev/null +++ b/test/constructors/complexmatrix_list_constructor.morpho @@ -0,0 +1,9 @@ +// Create a ComplexMatrix from a List of Lists + +import newlinalg + +var A = ComplexMatrix([[1+im,2-2im],[3+3im,4-4im]]) + +print A +// expect: [ 1 + 1im 2 - 2im ] +// expect: [ 3 + 3im 4 - 4im ] \ No newline at end of file diff --git a/test/constructors/complexmatrix_tuple_constructor.morpho b/test/constructors/complexmatrix_tuple_constructor.morpho new file mode 100644 index 00000000..fb895cd8 --- /dev/null +++ b/test/constructors/complexmatrix_tuple_constructor.morpho @@ -0,0 +1,9 @@ +// Create a ComplexMatrix from a List of Lists + +import newlinalg + +var A = ComplexMatrix(((1+im,2-2im),(3+3im,4-4im))) + +print A +// expect: [ 1 + 1im 2 - 2im ] +// expect: [ 3 + 3im 4 - 4im ] \ No newline at end of file diff --git a/test/constructors/matrix_array_constructor.morpho b/test/constructors/matrix_array_constructor.morpho index b73ca7f1..7bc168e4 100644 --- a/test/constructors/matrix_array_constructor.morpho +++ b/test/constructors/matrix_array_constructor.morpho @@ -1,4 +1,4 @@ -// Create a Matrix from a Tuple of Tuples +// Create a Matrix from an Array import newlinalg From 33676a43974c0c5488c3b8d12815714ca5dbd242 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 25 Dec 2025 11:59:41 -0500 Subject: [PATCH 056/156] Correct norms --- src/newlinalg.c | 1 + src/newlinalg.h | 3 + src/xcomplexmatrix.c | 16 ++++++ src/xmatrix.c | 79 ++++++++++++-------------- src/xmatrix.h | 16 ++++++ test/methods/complexmatrix_norm.morpho | 21 +++++++ test/methods/matrix_norm.morpho | 23 +++++--- 7 files changed, 110 insertions(+), 49 deletions(-) create mode 100644 test/methods/complexmatrix_norm.morpho diff --git a/src/newlinalg.c b/src/newlinalg.c index c8b072d1..4dbdfabc 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -44,6 +44,7 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_NOTSUPPORTED, ERROR_HALT, LINALG_NOTSUPPORTED_MSG); morpho_defineerror(LINALG_INVLDARGS, ERROR_HALT, LINALG_INVLDARGS_MSG); morpho_defineerror(LINALG_NNNMRCL_ARG, ERROR_HALT, LINALG_NNNMRCL_ARG_MSG); + morpho_defineerror(LINALG_NORMARGS, ERROR_HALT, LINALG_NORMARGS_MSG); } void newlinalg_finalize(void) { diff --git a/src/newlinalg.h b/src/newlinalg.h index 670f9bf1..6156599e 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -59,6 +59,9 @@ typedef enum { #define LINALG_NNNMRCL_ARG "LnAlgMtrxNnNmrclArg" #define LINALG_NNNMRCL_ARG_MSG "Matrix method requires numerical arguments." +#define LINALG_NORMARGS "LnAlgMtrxNrmArgs" +#define LINALG_NORMARGS_MSG "Method 'norm' requires a supported argument: 1 or inf." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 6763e752..5378e87a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -55,6 +55,19 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { return LINALGERR_OK; } +/** Evaluate norms */ +static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { + char cnrm = xmatrix_normtolapack(nrm); + int nrows=a->nrows, ncols=a->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); +#else + double work[a->nrows]; + return zlange_(&cnrm, &nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, work); +#endif +} + /** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -92,6 +105,7 @@ matrixinterfacedefn complexmatrixdefn = { .printeltobufffn = _printeltobufffn, .getelfn = _getelfn, .setelfn = _setelfn, + .normfn = _normfn, .solvefn = _solve, .eigenfn = _eigen }; @@ -304,6 +318,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__flo MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index f73cf9f3..a6d3d09f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -84,6 +84,30 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { return LINALGERR_OK; } +/** Convert xmatrix_norm_t to a character for use with lapack routines */ +char xmatrix_normtolapack(xmatrix_norm_t norm) { + switch (norm) { + case XMATRIX_NORM_MAX: return 'M'; + case XMATRIX_NORM_L1: return '1'; + case XMATRIX_NORM_INF: return 'I'; + case XMATRIX_NORM_FROBENIUS: return 'F'; + } + return '\0'; +} + +/** Evaluate norms */ +static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { + char cnrm = xmatrix_normtolapack(nrm); + int nrows=a->nrows, ncols=a->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + return LAPACKE_dlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); +#else + double work[a->nrows]; + return dlange_(&cnrm, &nrows, &ncols, a->elements, &nrows, work); +#endif +} + /** Low level linear solve */ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; @@ -121,6 +145,7 @@ matrixinterfacedefn xmatrixdefn = { .printeltobufffn = _printeltobufffn, .getelfn = _getelfn, .setelfn = _setelfn, + .normfn = _normfn, .solvefn = _solve, .eigenfn = _eigen }; @@ -345,35 +370,9 @@ linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y) { * Unary operations * ---------------------- */ -// TODO: Fix with correct norms! - -/** Computes the Frobenius norm of a matrix */ -double xmatrix_norm(objectxmatrix *a) { - return cblas_dnrm2((__LAPACK_int) a->nels, a->elements, 1); -} - -/** Computes the L1 norm of a matrix */ -double xmatrix_l1norm(objectxmatrix *a) { - return cblas_dasum((__LAPACK_int) a->nels, a->elements, 1); -} - -/** Computes the Ln norm of a matrix */ -double xmatrix_lnnorm(objectxmatrix *a, double n) { - double sum=0.0, c=0.0, y,t; - - for (MatrixCount_t i=0; inels; i++) { - y=pow(a->elements[i],n)-c; // Kahan summation - t=sum+y; - c=(t-sum)-y; - sum=t; - } - return pow(sum,1.0/n); -} - -/** Computes the infinity norm of a matrix */ -double xmatrix_linfnorm(objectxmatrix *a) { - int imax=cblas_idamax((__LAPACK_int) a->nels, a->elements, 1); - return a->elements[imax]; +/** Computes various matrix norms */ +double xmatrix_norm(objectxmatrix *a, xmatrix_norm_t norm) { + return xmatrix_getinterface(a)->normfn(a, norm); } /** Computes the sum of all elements in a matrix */ @@ -853,27 +852,23 @@ value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { /** Matrix norm */ value XMatrix_norm__x(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - value out = MORPHO_NIL; double n; if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { if (fabs(n-1.0) Date: Thu, 25 Dec 2025 13:04:22 -0500 Subject: [PATCH 057/156] Create complexmatrix_roll_negative.morpho --- test/methods/complexmatrix_roll_negative.morpho | 14 ++++++++++++++ 1 file changed, 14 insertions(+) create mode 100644 test/methods/complexmatrix_roll_negative.morpho diff --git a/test/methods/complexmatrix_roll_negative.morpho b/test/methods/complexmatrix_roll_negative.morpho new file mode 100644 index 00000000..3310c4eb --- /dev/null +++ b/test/methods/complexmatrix_roll_negative.morpho @@ -0,0 +1,14 @@ +// Negative roll values for ComplexMatrix + +import newlinalg + +var A = ComplexMatrix(3,1) +A[0,0]=1+1im +A[1,0]=2+2im +A[2,0]=3+3im + +print A.roll(-1) +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] +// expect: [ 1 + 1im ] + From b6e39e1e00a1f3c62ed09c0edfda3738b8e94168 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 25 Dec 2025 15:15:40 -0500 Subject: [PATCH 058/156] Fix matrix-matrix subtraction --- src/xmatrix.c | 8 ++++---- test/arithmetic/matrix_add_matrix.morpho | 12 ++++++++++++ test/arithmetic/matrix_mul_matrix.morpho | 17 +++++++++++++++++ test/arithmetic/matrix_sub_matrix.morpho | 14 ++++++++++++++ 4 files changed, 47 insertions(+), 4 deletions(-) create mode 100644 test/arithmetic/matrix_add_matrix.morpho create mode 100644 test/arithmetic/matrix_sub_matrix.morpho diff --git a/src/xmatrix.c b/src/xmatrix.c index a6d3d09f..31a319fa 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -729,14 +729,14 @@ value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { /** Add a vector */ static value _axpy(vm *v, int nargs, value *args, double alpha) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Receiver is left hand operand + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // Argument is right hand operand objectxmatrix *new = NULL; value out=MORPHO_NIL; if (a->ncols==b->ncols && a->nrows==b->nrows) { - new=xmatrix_clone(b); - if (new) xmatrix_axpy(alpha, a, new); // TODO: Error check + new=xmatrix_clone(a); + if (new) xmatrix_axpy(alpha, b, new); // TODO: Error check out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); diff --git a/test/arithmetic/matrix_add_matrix.morpho b/test/arithmetic/matrix_add_matrix.morpho new file mode 100644 index 00000000..076f6451 --- /dev/null +++ b/test/arithmetic/matrix_add_matrix.morpho @@ -0,0 +1,12 @@ +// Matrix arithmetic + +import newlinalg + +var a = XMatrix([[1, 2], [3, 4]]) +var b = XMatrix([[0, 1], [1, 0]]) + +print "A+B:" +print a+b +// expect: A+B: +// expect: [ 1 3 ] +// expect: [ 4 4 ] diff --git a/test/arithmetic/matrix_mul_matrix.morpho b/test/arithmetic/matrix_mul_matrix.morpho index 01ec46ed..ca0811e1 100644 --- a/test/arithmetic/matrix_mul_matrix.morpho +++ b/test/arithmetic/matrix_mul_matrix.morpho @@ -17,3 +17,20 @@ print A * B // expect: [ 1 2 ] // expect: [ 3 4 ] +var a = XMatrix([[1, 2], [3, 4]]) +var b = XMatrix([[0, 1], [1, 0]]) + +print "A*B:" +print a*b +// expect: A*B: +// expect: [ 2 1 ] +// expect: [ 4 3 ] + +var c = Matrix([[1,2,3], [4,5,6]]) +var d = Matrix([[1,2], [3,4], [5,6]]) + +print "C*D:" +print c*d +// expect: C*D: +// expect: [ 22 28 ] +// expect: [ 49 64 ] \ No newline at end of file diff --git a/test/arithmetic/matrix_sub_matrix.morpho b/test/arithmetic/matrix_sub_matrix.morpho new file mode 100644 index 00000000..800d1440 --- /dev/null +++ b/test/arithmetic/matrix_sub_matrix.morpho @@ -0,0 +1,14 @@ +// Matrix arithmetic + +import newlinalg + +var a = XMatrix([[1, 2], [3, 4]]) +var b = XMatrix([[0, 1], [1, 0]]) + + +print "A-B:" +print a-b +// expect: A-B: +// expect: [ 1 1 ] +// expect: [ 2 4 ] + From 761c661fcd7a018b2237f1ffda415faa5877e492 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 25 Dec 2025 15:53:28 -0500 Subject: [PATCH 059/156] ComplexMatrix constructor from Matrix --- src/xcomplexmatrix.c | 17 +++++++++++++++++ src/xmatrix.c | 2 +- src/xmatrix.h | 8 ++++++++ test/arithmetic/matrix_negate.morpho | 9 +++++++++ test/assign/matrix_assign.morpho | 6 +++++- .../complexmatrix_matrix_constructor.morpho | 11 +++++++++++ test/methods/matrix_dimensions.morpho | 5 +++-- 7 files changed, 54 insertions(+), 4 deletions(-) create mode 100644 test/arithmetic/matrix_negate.morpho create mode 100644 test/constructors/complexmatrix_matrix_constructor.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 5378e87a..1811b3a3 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -142,6 +142,14 @@ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t return LINALGERR_OK; } +/** Copies a real matrix x into a complex matrix y */ +linalgError_t complexmatrix_promote(objectxmatrix *x, objectcomplexmatrix *y) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 2); + return LINALGERR_OK; +} + /* ---------------------- * Complex arithmetic * ---------------------- */ @@ -212,6 +220,14 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +value complexmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); + if (new) complexmatrix_promote(a, new); + return morpho_wrapandbind(v, (object *) new); +} + /** Constructs a complexmatrix from a list of lists or tuples */ value complexmatrix_constructor__list(vm *v, int nargs, value *args) { objectxmatrix *new = xmatrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); @@ -347,6 +363,7 @@ void complexmatrix_initialize(void) { morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complexmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/src/xmatrix.c b/src/xmatrix.c index 31a319fa..a7d325ed 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -312,7 +312,7 @@ linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { return LINALGERR_OK; } -/** Copies a matrix y <- a */ +/** Copies a matrix y <- x */ linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; diff --git a/src/xmatrix.h b/src/xmatrix.h index b4f1f187..40914a0a 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -186,6 +186,14 @@ objectxmatrix *xmatrix_clone(objectxmatrix *in); objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); +linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y); +linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y); +void xmatrix_scale(objectxmatrix *x, double scale); +linalgError_t xmatrix_identity(objectxmatrix *x); +linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z); +linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta); +linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y); + linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); diff --git a/test/arithmetic/matrix_negate.morpho b/test/arithmetic/matrix_negate.morpho new file mode 100644 index 00000000..c5f01d06 --- /dev/null +++ b/test/arithmetic/matrix_negate.morpho @@ -0,0 +1,9 @@ +// Negate + +import newlinalg + +var a = XMatrix([[1,2], [3,4]]) + +print -a +// expect: [ -1 -2 ] +// expect: [ -3 -4 ] diff --git a/test/assign/matrix_assign.morpho b/test/assign/matrix_assign.morpho index 7d2e7c8f..70e19dad 100644 --- a/test/assign/matrix_assign.morpho +++ b/test/assign/matrix_assign.morpho @@ -13,4 +13,8 @@ B.assign(A) print B // expect: [ 1 2 ] -// expect: [ 3 4 ] \ No newline at end of file +// expect: [ 3 4 ] + +var C = Matrix(1,2) +B.assign(C) +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/constructors/complexmatrix_matrix_constructor.morpho b/test/constructors/complexmatrix_matrix_constructor.morpho new file mode 100644 index 00000000..fdd36cd9 --- /dev/null +++ b/test/constructors/complexmatrix_matrix_constructor.morpho @@ -0,0 +1,11 @@ +// Create a Matrix from an Array + +import newlinalg + +var A = XMatrix(((1,2), (3,4))) + +var B = ComplexMatrix(A) + +print B +// expect: [ 1 + 0im 2 + 0im ] +// expect: [ 3 + 0im 4 + 0im ] diff --git a/test/methods/matrix_dimensions.morpho b/test/methods/matrix_dimensions.morpho index ba8eabc1..4c72b37f 100644 --- a/test/methods/matrix_dimensions.morpho +++ b/test/methods/matrix_dimensions.morpho @@ -2,8 +2,9 @@ import newlinalg var A = XMatrix(2,3) -A[0,0]=1 - print A.dimensions() // expect: (2, 3) +var a = XMatrix([[0.8, -0.4], [0.4, 0.8]]) +print a.dimensions() +// expect: (2, 2) From 143a7c714f3ba8c7298807ddf1da2719057bc5a6 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Thu, 25 Dec 2025 16:22:42 -0500 Subject: [PATCH 060/156] Vector constructors --- src/xcomplexmatrix.c | 8 ++++++++ src/xmatrix.c | 8 ++++++++ .../constructors/complexmatrix_vector_constructor.morpho | 9 +++++++++ test/constructors/matrix_vector_constructor.morpho | 9 +++++++++ 4 files changed, 34 insertions(+) create mode 100644 test/constructors/complexmatrix_vector_constructor.morpho create mode 100644 test/constructors/matrix_vector_constructor.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 1811b3a3..35863642 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -220,6 +220,13 @@ value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +value complexmatrix_constructor__int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(nrows, 1, true); + return morpho_wrapandbind(v, (object *) new); +} + value complexmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -362,6 +369,7 @@ void complexmatrix_initialize(void) { object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complexmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/src/xmatrix.c b/src/xmatrix.c index a7d325ed..2772c354 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -574,6 +574,13 @@ value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +value xmatrix_constructor__int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + objectxmatrix *new=xmatrix_new(nrows, 1, true); + return morpho_wrapandbind(v, (object *) new); +} + /** Clones a matrix */ value xmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -1135,6 +1142,7 @@ void xmatrix_initialize(void) { object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int)", xmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (XMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Tuple)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/test/constructors/complexmatrix_vector_constructor.morpho b/test/constructors/complexmatrix_vector_constructor.morpho new file mode 100644 index 00000000..55e32e48 --- /dev/null +++ b/test/constructors/complexmatrix_vector_constructor.morpho @@ -0,0 +1,9 @@ +// Create a ComplexMatrix column vector + +import newlinalg + +var A = ComplexMatrix(2) + +print A +// expect: [ 0 + 0im ] +// expect: [ 0 + 0im ] diff --git a/test/constructors/matrix_vector_constructor.morpho b/test/constructors/matrix_vector_constructor.morpho new file mode 100644 index 00000000..1eb18c22 --- /dev/null +++ b/test/constructors/matrix_vector_constructor.morpho @@ -0,0 +1,9 @@ +// Create a Matrix + +import newlinalg + +var A = XMatrix(2) + +print A +// expect: [ 0 ] +// expect: [ 0 ] From 5be55fcb0501ceb1084326d15042b12c4e2cbd43 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 26 Dec 2025 17:36:15 -0500 Subject: [PATCH 061/156] ComplexMatrix_add__xmatrix --- src/xcomplexmatrix.c | 20 ++++++++++++++++++- src/xmatrix.c | 8 ++++++++ src/xmatrix.h | 2 ++ .../complexmatrix_add_matrix.morpho | 9 +++++++++ .../complexmatrix_addr_matrix.morpho | 9 +++++++++ 5 files changed, 47 insertions(+), 1 deletion(-) create mode 100644 test/arithmetic/complexmatrix_add_matrix.morpho create mode 100644 test/arithmetic/complexmatrix_addr_matrix.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 35863642..8b51b15e 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -258,6 +258,22 @@ value complexmatrix_constructor__array(vm *v, int nargs, value *args) { * Arithmetic * ---------------------- */ +value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->ncols && a->nrows==b->nrows) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); + if (new) { + complexmatrix_promote(b, new); + xmatrix_axpy(1.0, a, new); + } + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); + return out; +} + value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -270,7 +286,7 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { complexmatrix_mmul(alpha, a, b, beta, new); } out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } @@ -328,8 +344,10 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatri MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 2772c354..3e0af23f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -31,6 +31,13 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a) { return NULL; } +/** Checks if a value is a known kind of matrix. */ +bool xmatrix_isamatrix(value val) { + if (!MORPHO_ISOBJECT(val)) return false; + int iindx=MORPHO_GETOBJECT(val)->type-OBJECT_XMATRIX; + return iindx>=0 && iindx Date: Fri, 26 Dec 2025 18:04:32 -0500 Subject: [PATCH 062/156] ComplexMatrix sub matrix --- src/xcomplexmatrix.c | 27 +++++++++++++++---- src/xmatrix.c | 1 + .../complexmatrix_add_complexmatrix.morpho | 8 ++++++ .../complexmatrix_sub_complexmatrix.morpho | 9 +++++++ .../complexmatrix_sub_matrix.morpho | 9 +++++++ .../complexmatrix_subr_matrix.morpho | 9 +++++++ 6 files changed, 58 insertions(+), 5 deletions(-) create mode 100644 test/arithmetic/complexmatrix_add_complexmatrix.morpho create mode 100644 test/arithmetic/complexmatrix_sub_complexmatrix.morpho create mode 100644 test/arithmetic/complexmatrix_sub_matrix.morpho create mode 100644 test/arithmetic/complexmatrix_subr_matrix.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 8b51b15e..77ceb75c 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -258,7 +258,8 @@ value complexmatrix_constructor__array(vm *v, int nargs, value *args) { * Arithmetic * ---------------------- */ -value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { +/** Add a vector */ +static value _axpy(vm *v, int nargs, value *args, double alpha) { objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -267,13 +268,27 @@ value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); if (new) { complexmatrix_promote(b, new); - xmatrix_axpy(1.0, a, new); + xmatrix_axpy(alpha, a, new); } out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } +value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { + return _axpy(v, nargs, args, 1.0); +} + +value ComplexMatrix_sub__xmatrix(vm *v, int nargs, value *args) { + value out = _axpy(v, nargs, args, -1.0); + if (xmatrix_isamatrix(out)) xmatrix_scale(MORPHO_GETXMATRIX(out), -1.0); // -(-A + B) + return out; +} + +value ComplexMatrix_subr__xmatrix(vm *v, int nargs, value *args) { + return _axpy(v, nargs, args, -1.0); +} + value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -342,16 +357,18 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex_ MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_subr__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 3e0af23f..5dbc56f3 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -790,6 +790,7 @@ value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { } value XMatrix_sub__x(vm *v, int nargs, value *args) { + if (xmatrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr return _xpa(v,nargs,args,1.0,-1.0); } diff --git a/test/arithmetic/complexmatrix_add_complexmatrix.morpho b/test/arithmetic/complexmatrix_add_complexmatrix.morpho new file mode 100644 index 00000000..6417bca8 --- /dev/null +++ b/test/arithmetic/complexmatrix_add_complexmatrix.morpho @@ -0,0 +1,8 @@ +// Add a complexmatrix to a complexmatrix +import newlinalg + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) + +print A + A +// expect: [ 2 + 2im 4 + 4im ] +// expect: [ 6 + 6im 8 + 8im ] diff --git a/test/arithmetic/complexmatrix_sub_complexmatrix.morpho b/test/arithmetic/complexmatrix_sub_complexmatrix.morpho new file mode 100644 index 00000000..c6bb639d --- /dev/null +++ b/test/arithmetic/complexmatrix_sub_complexmatrix.morpho @@ -0,0 +1,9 @@ +// Subtract a complexmatrix from a complexmatrix +import newlinalg + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = ComplexMatrix(((4+4im, 3+3im), (2+2im, 1+1im))) + +print A - B +// expect: [ -3 - 3im -1 - 1im ] +// expect: [ 1 + 1im 3 + 3im ] diff --git a/test/arithmetic/complexmatrix_sub_matrix.morpho b/test/arithmetic/complexmatrix_sub_matrix.morpho new file mode 100644 index 00000000..1b0afe9e --- /dev/null +++ b/test/arithmetic/complexmatrix_sub_matrix.morpho @@ -0,0 +1,9 @@ +// Subtract a matrix from a complexmatrix +import newlinalg + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = XMatrix(((4, 3), (2, 1))) + +print A - B +// expect: [ -3 + 1im -1 + 2im ] +// expect: [ 1 + 3im 3 + 4im ] diff --git a/test/arithmetic/complexmatrix_subr_matrix.morpho b/test/arithmetic/complexmatrix_subr_matrix.morpho new file mode 100644 index 00000000..03e9bbf0 --- /dev/null +++ b/test/arithmetic/complexmatrix_subr_matrix.morpho @@ -0,0 +1,9 @@ +// Subtract a matrix from a complexmatrix +import newlinalg + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = XMatrix(((4, 3), (2, 1))) + +print B - A +// expect: [ 3 - 1im 1 - 2im ] +// expect: [ -1 - 3im -3 - 4im ] From 364a15c116ea770d9cfb7eba6b0c2d64da5e28a7 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 05:32:55 -0500 Subject: [PATCH 063/156] Multiply by a complex number --- src/newlinalg.h | 3 ++ src/xcomplexmatrix.c | 15 +++++++++ src/xmatrix.c | 32 +++++++------------ .../complexmatrix_mul_complex.morpho | 8 +++++ .../complexmatrix_mulr_complex.xmorpho | 8 +++++ 5 files changed, 46 insertions(+), 20 deletions(-) create mode 100644 test/arithmetic/complexmatrix_mul_complex.morpho create mode 100644 test/arithmetic/complexmatrix_mulr_complex.xmorpho diff --git a/src/newlinalg.h b/src/newlinalg.h index 6156599e..415ad80d 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -73,6 +73,9 @@ void linalg_raiseerror(vm *v, linalgError_t err); - if an error occurred, raises the corresponding error in a vm called v */ #define LINALG_ERRCHECKVM(f) { linalgError_t err = f; if (err!=LINALGERR_OK) linalg_raiseerror(v, err); } +/** As for LINALG_ERRCHECKVM but additionally jumps to a given label */ +#define LINALG_ERRCHECKVMGOTO(f, label) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto label; }} + /* ------------------------------------------------------- * Include the rest of the library * ------------------------------------------------------- */ diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 77ceb75c..c171e718 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -166,6 +166,11 @@ linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxm return LINALGERR_OK; } +/** Scales a matrix x <- scale * x >*/ +void complexmatrix_scale(objectxmatrix *a, MorphoComplex scale) { + cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); +} + /** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { if (!(a->ncols==b->ncols && a->nrows==b->nrows)) return LINALGERR_INCOMPATIBLE_DIM; @@ -289,6 +294,14 @@ value ComplexMatrix_subr__xmatrix(vm *v, int nargs, value *args) { return _axpy(v, nargs, args, -1.0); } +value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + objectxmatrix *new = xmatrix_clone(a); + if (new) complexmatrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); + return morpho_wrapandbind(v, (object *) new); +} + value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -370,7 +383,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_subr__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 5dbc56f3..4cbe7ff5 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -750,7 +750,7 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { if (a->ncols==b->ncols && a->nrows==b->nrows) { new=xmatrix_clone(a); - if (new) xmatrix_axpy(alpha, b, new); // TODO: Error check + if (new) LINALG_ERRCHECKVM(xmatrix_axpy(alpha, b, new)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); @@ -760,12 +760,13 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { /** Add a scalar */ static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *new=NULL; value out=MORPHO_NIL; double beta; if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &beta)) { - objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_addscalar(new, sgna, beta*sgnb); + new = xmatrix_clone(a); + if (new) LINALG_ERRCHECKVM(xmatrix_addscalar(new, sgna, beta*sgnb)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INVLDARGS); @@ -817,7 +818,7 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { if (a->ncols==b->nrows) { objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); - if (new) xmatrix_mmul(1.0, a, b, 0.0, new); + if (new) LINALG_ERRCHECKVM(xmatrix_mmul(1.0, a, b, 0.0, new)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; @@ -840,13 +841,11 @@ value XMatrix_div__float(vm *v, int nargs, value *args) { value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument - value out=MORPHO_NIL; objectxmatrix *sol = xmatrix_clone(b); - out = morpho_wrapandbind(v, (object *) sol); if (sol) LINALG_ERRCHECKVM(xmatrix_solve(a, sol)); - return out; + return morpho_wrapandbind(v, (object *) sol); } /** Accumulate in place */ @@ -855,7 +854,7 @@ value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)); double alpha=1.0; - if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) morpho_runtimeerror(v, MATRIX_ARITHARGS); + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } LINALG_ERRCHECKVM(xmatrix_axpy(alpha, b, a)); return MORPHO_NIL; @@ -907,29 +906,22 @@ value XMatrix_trace(vm *v, int nargs, value *args) { /** Inverts a matrix */ value XMatrix_transpose(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - objectxmatrix *new = xmatrix_clone(a); if (new) { new->ncols=a->nrows; new->nrows=a->ncols; LINALG_ERRCHECKVM(xmatrix_transpose(a, new)); } - out = morpho_wrapandbind(v, (object *) new); - - return out; + return morpho_wrapandbind(v, (object *) new); } /** Inverts a matrix */ value XMatrix_inverse(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - objectxmatrix *new = xmatrix_clone(a); - out = morpho_wrapandbind(v, (object *) new); if (new) LINALG_ERRCHECKVM(xmatrix_inverse(new)); - return out; + return morpho_wrapandbind(v, (object *) new); } static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { @@ -966,7 +958,7 @@ value XMatrix_eigenvalues(vm *v, int nargs, value *args) { linalgError_t err=xmatrix_eigen(a, w, NULL); if (err==LINALGERR_OK) { if (_processeigenvalues(v, n, w, &out)) { - morpho_bindobjects(v, 1, &out); // TODO: Correctly bind subsidiary values + morpho_bindobjects(v, 1, &out); } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); } else linalg_raiseerror(v, err); @@ -998,12 +990,12 @@ value XMatrix_eigensystem(vm *v, int nargs, value *args) { otuple = object_newtuple(2, outtuple); _CHK(otuple); - return morpho_wrapandbind(v, (object *) otuple); // TODO: Correctly bind subsidiary values + return morpho_wrapandbind(v, (object *) otuple); _eigensystem_cleanup: if (evec) object_free((object *) evec); if (otuple) object_free((object *) otuple); - morpho_freeobject(ev); // TODO: Free contents? + morpho_freeobject(ev); // TODO: Free contents? return MORPHO_NIL; } diff --git a/test/arithmetic/complexmatrix_mul_complex.morpho b/test/arithmetic/complexmatrix_mul_complex.morpho new file mode 100644 index 00000000..c8404459 --- /dev/null +++ b/test/arithmetic/complexmatrix_mul_complex.morpho @@ -0,0 +1,8 @@ +// Multiply ComplexMatrix by scalar +import newlinalg + +var A = ComplexMatrix(((1,2),(3,4))) + +print A * (1+im) +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] \ No newline at end of file diff --git a/test/arithmetic/complexmatrix_mulr_complex.xmorpho b/test/arithmetic/complexmatrix_mulr_complex.xmorpho new file mode 100644 index 00000000..ab5cf79d --- /dev/null +++ b/test/arithmetic/complexmatrix_mulr_complex.xmorpho @@ -0,0 +1,8 @@ +// Multiply ComplexMatrix by scalar +import newlinalg + +var A = ComplexMatrix(((1,2),(3,4))) + +print (1+im) * A +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] \ No newline at end of file From d34dd2b1e81ebb5fd802e5b5fd309241662403ab Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 09:33:59 -0500 Subject: [PATCH 064/156] Complexmatrix-Matrix multiplication --- src/xcomplexmatrix.c | 44 +++++++++++++++++++ src/xmatrix.c | 2 +- .../complexmatrix_mul_complex.morpho | 2 +- .../complexmatrix_mul_complexmatrix.morpho | 19 ++++++++ .../complexmatrix_mul_matrix.morpho | 18 ++------ .../complexmatrix_mulr_matrix.morpho | 9 ++++ 6 files changed, 78 insertions(+), 16 deletions(-) create mode 100644 test/arithmetic/complexmatrix_mul_complexmatrix.morpho create mode 100644 test/arithmetic/complexmatrix_mulr_matrix.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index c171e718..7c32666b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -318,6 +318,48 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { return out; } +value ComplexMatrix_mul__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->nrows) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, true); + objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); + + if (new && btemp) { + MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); + complexmatrix_promote(b, btemp); + complexmatrix_mmul(alpha, a, btemp, beta, new); + } + if (btemp) object_free((object *) btemp); + + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); + return out; +} + +value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->nrows) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, true); + objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); + + if (new && btemp) { + MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); + complexmatrix_promote(b, btemp); + complexmatrix_mmul(alpha, btemp, a, beta, new); + } + if (btemp) object_free((object *) btemp); + + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); + return out; +} + /** Computes the trace */ value ComplexMatrix_trace(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -385,6 +427,8 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMa MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mulr__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 4cbe7ff5..177b92f5 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -804,7 +804,7 @@ value XMatrix_mul__float(vm *v, int nargs, value *args) { value out=MORPHO_NIL; double scale; - morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; objectxmatrix *new = xmatrix_clone(a); if (new) xmatrix_scale(new, scale); diff --git a/test/arithmetic/complexmatrix_mul_complex.morpho b/test/arithmetic/complexmatrix_mul_complex.morpho index c8404459..7c2d7b75 100644 --- a/test/arithmetic/complexmatrix_mul_complex.morpho +++ b/test/arithmetic/complexmatrix_mul_complex.morpho @@ -5,4 +5,4 @@ var A = ComplexMatrix(((1,2),(3,4))) print A * (1+im) // expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] \ No newline at end of file +// expect: [ 3 + 3im 4 + 4im ] diff --git a/test/arithmetic/complexmatrix_mul_complexmatrix.morpho b/test/arithmetic/complexmatrix_mul_complexmatrix.morpho new file mode 100644 index 00000000..00f78a9f --- /dev/null +++ b/test/arithmetic/complexmatrix_mul_complexmatrix.morpho @@ -0,0 +1,19 @@ +// Multiply two ComplexMatrices +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = ComplexMatrix(2,2) +B[0,0]=1 +B[0,1]=1im +B[1,0]=-1im +B[1,1]=1 + +print A * B +// expect: [ 3 - 1im 1 + 3im ] +// expect: [ 7 - 1im 1 + 7im ] + diff --git a/test/arithmetic/complexmatrix_mul_matrix.morpho b/test/arithmetic/complexmatrix_mul_matrix.morpho index 00f78a9f..18e7419c 100644 --- a/test/arithmetic/complexmatrix_mul_matrix.morpho +++ b/test/arithmetic/complexmatrix_mul_matrix.morpho @@ -1,19 +1,9 @@ // Multiply two ComplexMatrices import newlinalg -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im - -var B = ComplexMatrix(2,2) -B[0,0]=1 -B[0,1]=1im -B[1,0]=-1im -B[1,1]=1 +var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) +var B = XMatrix(((4,3),(2,1))) print A * B -// expect: [ 3 - 1im 1 + 3im ] -// expect: [ 7 - 1im 1 + 7im ] - +// expect: [ 8 + 8im 5 + 5im ] +// expect: [ 20 + 20im 13 + 13im ] \ No newline at end of file diff --git a/test/arithmetic/complexmatrix_mulr_matrix.morpho b/test/arithmetic/complexmatrix_mulr_matrix.morpho new file mode 100644 index 00000000..5f1c6bc5 --- /dev/null +++ b/test/arithmetic/complexmatrix_mulr_matrix.morpho @@ -0,0 +1,9 @@ +// Multiply two ComplexMatrices +import newlinalg + +var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) +var B = XMatrix(((4,3),(2,1))) + +print B * A +// expect: [ 13 + 13im 20 + 20im ] +// expect: [ 5 + 5im 8 + 8im ] \ No newline at end of file From 6512fed762cfd791528f56890b1e229caf46e4f5 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 10:30:02 -0500 Subject: [PATCH 065/156] Refactor of complexmatrix-matrix multiply --- src/xcomplexmatrix.c | 71 ++++++++----------- .../complexmatrix_mulr_matrix.morpho | 8 ++- ...lexmatrix_tuple_column_constructor.xmorpho | 9 +++ 3 files changed, 45 insertions(+), 43 deletions(-) create mode 100644 test/constructors/complexmatrix_tuple_column_constructor.xmorpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 7c32666b..e2e8ea53 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -302,62 +302,49 @@ value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +static objectxmatrix *_mul(objectxmatrix *a, objectxmatrix *b) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); + if (new) { + MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); + complexmatrix_mmul(alpha, a, b, beta, new); + } + return new; +} + value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; + if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - if (a->ncols==b->nrows) { - objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); - if (new) { - MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); - complexmatrix_mmul(alpha, a, b, beta, new); - } - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - return out; + return morpho_wrapandbind(v, (object *) _mul(a,b)); } value ComplexMatrix_mul__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; + if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - if (a->ncols==b->nrows) { - objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, true); - objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); - - if (new && btemp) { - MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); - complexmatrix_promote(b, btemp); - complexmatrix_mmul(alpha, a, btemp, beta, new); - } - if (btemp) object_free((object *) btemp); - - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - return out; + objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); + if (btemp) complexmatrix_promote(b, btemp); + else { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + + objectcomplexmatrix *new =_mul(a,btemp); + if (btemp) object_free((object *) btemp); + return morpho_wrapandbind(v, (object *) new); } value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - if (a->ncols==b->nrows) { - objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, true); - objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); - - if (new && btemp) { - MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); - complexmatrix_promote(b, btemp); - complexmatrix_mmul(alpha, btemp, a, beta, new); - } - if (btemp) object_free((object *) btemp); - - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - return out; + objectcomplexmatrix *atemp=complexmatrix_new(a->nrows, a->ncols, true); + if (atemp) { complexmatrix_promote(a, atemp); } + else { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + + objectcomplexmatrix *new =_mul(atemp,b); + if (atemp) object_free((object *) atemp); + return morpho_wrapandbind(v, (object *) new); } /** Computes the trace */ diff --git a/test/arithmetic/complexmatrix_mulr_matrix.morpho b/test/arithmetic/complexmatrix_mulr_matrix.morpho index 5f1c6bc5..7cba06d6 100644 --- a/test/arithmetic/complexmatrix_mulr_matrix.morpho +++ b/test/arithmetic/complexmatrix_mulr_matrix.morpho @@ -6,4 +6,10 @@ var B = XMatrix(((4,3),(2,1))) print B * A // expect: [ 13 + 13im 20 + 20im ] -// expect: [ 5 + 5im 8 + 8im ] \ No newline at end of file +// expect: [ 5 + 5im 8 + 8im ] + +var C = ComplexMatrix([[1+1im],[3+3im]]) + +print B * C +// expect: [ 13 + 13im ] +// expect: [ 5 + 5im ] diff --git a/test/constructors/complexmatrix_tuple_column_constructor.xmorpho b/test/constructors/complexmatrix_tuple_column_constructor.xmorpho new file mode 100644 index 00000000..ac714044 --- /dev/null +++ b/test/constructors/complexmatrix_tuple_column_constructor.xmorpho @@ -0,0 +1,9 @@ +// Create a column vector from a list of tuples + +import newlinalg + +var C = ComplexMatrix(((1+1im),(3+3im))) + +print C +// expect: [ 1 + 1im ] +// expect: [ 3 + 3im ] From e61439b4a57b5477f92f14ddbad0045c769f93e0 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 13:43:40 -0500 Subject: [PATCH 066/156] Shorten and make common functions --- src/xcomplexmatrix.c | 56 ++++++++++++++++++-------------------------- 1 file changed, 23 insertions(+), 33 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index e2e8ea53..2607f778 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -302,49 +302,39 @@ value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -static objectxmatrix *_mul(objectxmatrix *a, objectxmatrix *b) { +/** Multiplication by a complexmatrix or a regular matrix */ +static bool _promote(vm *v, objectxmatrix *b, objectxmatrix **bp) { // Promotes b to a complexmatrix + *bp=complexmatrix_new(b->nrows, b->ncols, true); + if (!bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } + return complexmatrix_promote(b, *bp)==LINALGERR_OK; +} + +static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { + if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); - if (new) { - MorphoComplex alpha = MCBuild(1.0, 0.0), beta = MCBuild(0.0, 0.0); - complexmatrix_mmul(alpha, a, b, beta, new); - } - return new; + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + complexmatrix_mmul(MCBuild(1.0, 0.0), a, b, MCBuild(0.0, 0.0), new); + return morpho_wrapandbind(v, (object *) new); +} + +static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { + objectxmatrix *A=MORPHO_GETXMATRIX(a), *B=MORPHO_GETXMATRIX(b), *bp=NULL; + if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } + value out = (swap ? _cmmul(v, B, A) : _cmmul(v, A, B)); // Multiply, swapping arguments if requested + if (bp) object_free((object *) bp); + return out; } value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - - return morpho_wrapandbind(v, (object *) _mul(a,b)); + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), false, false); } value ComplexMatrix_mul__xmatrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - - objectcomplexmatrix *btemp=complexmatrix_new(b->nrows, b->ncols, true); - if (btemp) complexmatrix_promote(b, btemp); - else { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - - objectcomplexmatrix *new =_mul(a,btemp); - if (btemp) object_free((object *) btemp); - return morpho_wrapandbind(v, (object *) new); + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, false); } value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - - objectcomplexmatrix *atemp=complexmatrix_new(a->nrows, a->ncols, true); - if (atemp) { complexmatrix_promote(a, atemp); } - else { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - - objectcomplexmatrix *new =_mul(atemp,b); - if (atemp) object_free((object *) atemp); - return morpho_wrapandbind(v, (object *) new); + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, true); } /** Computes the trace */ From 4437ef3feb5d7eaef122163c84dc40b7a4149b9f Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 13:54:55 -0500 Subject: [PATCH 067/156] Fix incorrect check --- src/xcomplexmatrix.c | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 2607f778..a092520a 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -305,11 +305,11 @@ value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { /** Multiplication by a complexmatrix or a regular matrix */ static bool _promote(vm *v, objectxmatrix *b, objectxmatrix **bp) { // Promotes b to a complexmatrix *bp=complexmatrix_new(b->nrows, b->ncols, true); - if (!bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } + if (!*bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } return complexmatrix_promote(b, *bp)==LINALGERR_OK; } -static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { +static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b returning a wrapped value if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } @@ -317,9 +317,9 @@ static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { return morpho_wrapandbind(v, (object *) new); } -static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { +static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { // Driver routine for a*b objectxmatrix *A=MORPHO_GETXMATRIX(a), *B=MORPHO_GETXMATRIX(b), *bp=NULL; - if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } + if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } // Promote b if requested value out = (swap ? _cmmul(v, B, A) : _cmmul(v, A, B)); // Multiply, swapping arguments if requested if (bp) object_free((object *) bp); return out; From f2c2ac9687911f3a8f7c5a3c830c9cabd9e3ad86 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 14:00:20 -0500 Subject: [PATCH 068/156] Minor fix for consistency --- src/xcomplexmatrix.c | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index a092520a..566228fb 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -137,7 +137,7 @@ linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - MatrixCount_t ix = 2*(col*matrix->nrows+row); + MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); return LINALGERR_OK; } From 9a2874771561ee30c5297e179658ade9c7dc7338 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 16:31:33 -0500 Subject: [PATCH 069/156] Vector-like constructors --- src/xmatrix.c | 4 ++++ ...omplexmatrix_list_vector_constructor.morpho | 18 ++++++++++++++++++ ...plexmatrix_tuple_column_constructor.morpho} | 0 .../matrix_list_vector_constructor.morpho | 9 +++++++++ 4 files changed, 31 insertions(+) create mode 100644 test/constructors/complexmatrix_list_vector_constructor.morpho rename test/constructors/{complexmatrix_tuple_column_constructor.xmorpho => complexmatrix_tuple_column_constructor.morpho} (100%) create mode 100644 test/constructors/matrix_list_vector_constructor.morpho diff --git a/src/xmatrix.c b/src/xmatrix.c index 177b92f5..b804176d 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -196,6 +196,8 @@ static bool _getelement(value v, int i, value *out) { return list_getelement(MORPHO_GETLIST(v), i, out); } else if (MORPHO_ISTUPLE(v)) { return tuple_getelement(MORPHO_GETTUPLE(v), i, out); + } else if (MORPHO_ISNUMBER(v) || MORPHO_ISCOMPLEX(v)) { + if (i==0) { *out = v; return true; } } return false; } @@ -205,6 +207,8 @@ static bool _length(value v, int *len) { *len = list_length(MORPHO_GETLIST(v)); return true; } else if (MORPHO_ISTUPLE(v)) { *len = tuple_length(MORPHO_GETTUPLE(v)); return true; + } else if (MORPHO_ISNUMBER(v) || MORPHO_ISCOMPLEX(v)) { + *len = 1; return true; } return false; } diff --git a/test/constructors/complexmatrix_list_vector_constructor.morpho b/test/constructors/complexmatrix_list_vector_constructor.morpho new file mode 100644 index 00000000..3915d5be --- /dev/null +++ b/test/constructors/complexmatrix_list_vector_constructor.morpho @@ -0,0 +1,18 @@ +// Create a ComplexMatrix from a List of Values + +import newlinalg + +var A = ComplexMatrix([1+im, 2-2im, 3+3im, 4-4im]) + +print A +// expect: [ 1 + 1im ] +// expect: [ 2 - 2im ] +// expect: [ 3 + 3im ] +// expect: [ 4 - 4im ] + +var B = ComplexMatrix(((1+im), (2), (3), (4-4im))) +print B +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] +// expect: [ 3 + 0im ] +// expect: [ 4 - 4im ] diff --git a/test/constructors/complexmatrix_tuple_column_constructor.xmorpho b/test/constructors/complexmatrix_tuple_column_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_tuple_column_constructor.xmorpho rename to test/constructors/complexmatrix_tuple_column_constructor.morpho diff --git a/test/constructors/matrix_list_vector_constructor.morpho b/test/constructors/matrix_list_vector_constructor.morpho new file mode 100644 index 00000000..4e34f4ac --- /dev/null +++ b/test/constructors/matrix_list_vector_constructor.morpho @@ -0,0 +1,9 @@ +// Create a column vector from a list of tuples + +import newlinalg + +var C = XMatrix(((1),(2))) + +print C +// expect: [ 1 ] +// expect: [ 2 ] From 9ddec573993c948bae6f140dcc4f22b54df9908d Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 16:58:24 -0500 Subject: [PATCH 070/156] ComplexMatrix real() and imag() --- src/xcomplexmatrix.c | 37 +++++++++++++++++++++++--- src/xmatrix.h | 1 + test/methods/complexmatrix_imag.morpho | 12 +++++++++ test/methods/complexmatrix_real.morpho | 12 +++++++++ 4 files changed, 58 insertions(+), 4 deletions(-) create mode 100644 test/methods/complexmatrix_imag.morpho create mode 100644 test/methods/complexmatrix_real.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 566228fb..0719cebd 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -13,6 +13,7 @@ #include "xmatrix.h" #include "xcomplexmatrix.h" #include "format.h" +#include "cmplx.h" objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype @@ -143,13 +144,22 @@ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t } /** Copies a real matrix x into a complex matrix y */ -linalgError_t complexmatrix_promote(objectxmatrix *x, objectcomplexmatrix *y) { +static linalgError_t _stridedcopy(objectxmatrix *x, objectxmatrix *y, int offset) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 2); + cblas_dcopy((__LAPACK_int) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); return LINALGERR_OK; } +linalgError_t complexmatrix_promote(objectxmatrix *x, objectcomplexmatrix *y) { + return _stridedcopy(x, y, 0); +} + +/** Copies the real part of a complex matrix y into */ +linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectxmatrix *y, bool imag) { + return _stridedcopy(x, y, (imag?1:0)); +} + /* ---------------------- * Complex arithmetic * ---------------------- */ @@ -309,7 +319,7 @@ static bool _promote(vm *v, objectxmatrix *b, objectxmatrix **bp) { // Promotes return complexmatrix_promote(b, *bp)==LINALGERR_OK; } -static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b returning a wrapped value +static value _axb(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b returning a wrapped value if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } @@ -320,7 +330,7 @@ static value _cmmul(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { // Driver routine for a*b objectxmatrix *A=MORPHO_GETXMATRIX(a), *B=MORPHO_GETXMATRIX(b), *bp=NULL; if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } // Promote b if requested - value out = (swap ? _cmmul(v, B, A) : _cmmul(v, A, B)); // Multiply, swapping arguments if requested + value out = (swap ? _axb(v, B, A) : _axb(v, A, B)); // Multiply, swapping arguments if requested if (bp) object_free((object *) bp); return out; } @@ -358,6 +368,23 @@ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { return out; } +static value _realimag(vm *v, int nargs, value *args, bool imag) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *new=xmatrix_new(a->nrows, a->ncols, false); + if (new) complexmatrix_demote(a, new, imag); + return morpho_wrapandbind(v, (object *) new); +} + +/** Extract real part */ +value ComplexMatrix_real(vm *v, int nargs, value *args) { + return _realimag(v, nargs, args, false); +} + +/** Extract imaginary part */ +value ComplexMatrix_imag(vm *v, int nargs, value *args) { + return _realimag(v, nargs, args, true); +} + /* --------- * Products * --------- */ @@ -417,6 +444,8 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, MORPHO_FN MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "XMatrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "XMatrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 6b01aa4d..e91db688 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -184,6 +184,7 @@ IMPLEMENTATIONFN(XMatrix_dimensions); bool xmatrix_isamatrix(value val); objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); +objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero); objectxmatrix *xmatrix_clone(objectxmatrix *in); objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); diff --git a/test/methods/complexmatrix_imag.morpho b/test/methods/complexmatrix_imag.morpho new file mode 100644 index 00000000..05324513 --- /dev/null +++ b/test/methods/complexmatrix_imag.morpho @@ -0,0 +1,12 @@ +// Inner product of ComplexMatrices (Frobenius inner product with conjugation) +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.imag() +// expect: [ 4 3 ] +// expect: [ 2 1 ] diff --git a/test/methods/complexmatrix_real.morpho b/test/methods/complexmatrix_real.morpho new file mode 100644 index 00000000..8fc318ad --- /dev/null +++ b/test/methods/complexmatrix_real.morpho @@ -0,0 +1,12 @@ +// Inner product of ComplexMatrices (Frobenius inner product with conjugation) +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.real() +// expect: [ 1 2 ] +// expect: [ 3 4 ] From dc274aea40e48b967c1c80b75a921e1608d2b85e Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 17:30:56 -0500 Subject: [PATCH 071/156] conj() and conjTranspose() --- src/xcomplexmatrix.c | 24 ++++++++++++++++++- src/xcomplexmatrix.h | 2 ++ test/methods/complexmatrix_conj.morpho | 12 ++++++++++ .../complexmatrix_conjTranspose.morpho | 22 +++++++++++++++++ test/methods/complexmatrix_real.morpho | 2 +- 5 files changed, 60 insertions(+), 2 deletions(-) create mode 100644 test/methods/complexmatrix_conj.morpho create mode 100644 test/methods/complexmatrix_conjTranspose.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 0719cebd..8a922661 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -59,7 +59,7 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { /** Evaluate norms */ static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { char cnrm = xmatrix_normtolapack(nrm); - int nrows=a->nrows, ncols=a->ncols, info; + int nrows=a->nrows, ncols=a->ncols; #ifdef MORPHO_LINALG_USE_LAPACKE return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); @@ -385,6 +385,26 @@ value ComplexMatrix_imag(vm *v, int nargs, value *args) { return _realimag(v, nargs, args, true); } +static value _conj(vm *v, int nargs, value *args, bool trans) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *new=xmatrix_clone(a); + if (new) { + if (trans) xmatrix_transpose(a, new); + cblas_dscal(a->nrows*a->ncols, -1.0, new->elements+1, new->nvals); + } + return morpho_wrapandbind(v, (object *) new); +} + +/** Extract imaginary part */ +value ComplexMatrix_conj(vm *v, int nargs, value *args) { + return _conj(v, nargs, args, false); +} + +/** Return conjugate transpose */ +value ComplexMatrix_conjTranspose(vm *v, int nargs, value *args) { + return _conj(v, nargs, args, true); +} + /* --------- * Products * --------- */ @@ -446,6 +466,8 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "XMatrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "XMatrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), diff --git a/src/xcomplexmatrix.h b/src/xcomplexmatrix.h index 4331a06a..a048eda9 100644 --- a/src/xcomplexmatrix.h +++ b/src/xcomplexmatrix.h @@ -13,6 +13,8 @@ #define COMPLEXMATRIX_CLASSNAME "ComplexMatrix" +#define COMPLEXMATRIX_CONJTRANSPOSE_METHOD "conjTranspose" + void complexmatrix_initialize(void); #endif diff --git a/test/methods/complexmatrix_conj.morpho b/test/methods/complexmatrix_conj.morpho new file mode 100644 index 00000000..a55c4473 --- /dev/null +++ b/test/methods/complexmatrix_conj.morpho @@ -0,0 +1,12 @@ +// Conjugate of a ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.conj() +// expect: [ 1 - 4im 2 - 3im ] +// expect: [ 3 - 2im 4 - 1im ] diff --git a/test/methods/complexmatrix_conjTranspose.morpho b/test/methods/complexmatrix_conjTranspose.morpho new file mode 100644 index 00000000..b616fc73 --- /dev/null +++ b/test/methods/complexmatrix_conjTranspose.morpho @@ -0,0 +1,22 @@ +// Conjugate of a ComplexMatrix +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +var B=A.conjTranspose() +print B +// expect: [ 1 - 4im 3 - 2im ] +// expect: [ 2 - 3im 4 - 1im ] + +for (ev in A.eigenvalues()) print isnumber(ev) +// expect: false +// expect: false + +var C=A+B // create a hermitian matrix +for (ev in C.eigenvalues()) print isnumber(ev) +// expect: true +// expect: true diff --git a/test/methods/complexmatrix_real.morpho b/test/methods/complexmatrix_real.morpho index 8fc318ad..1c508280 100644 --- a/test/methods/complexmatrix_real.morpho +++ b/test/methods/complexmatrix_real.morpho @@ -1,4 +1,4 @@ -// Inner product of ComplexMatrices (Frobenius inner product with conjugation) +// Real part of a ComplexMatrix import newlinalg var A = ComplexMatrix(2,2) From 5ad57f5f25fbb164084e62bb773869e5fb12b934 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 17:46:02 -0500 Subject: [PATCH 072/156] Free partially allocated objects --- src/xmatrix.c | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index b804176d..6412b20c 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -999,7 +999,12 @@ value XMatrix_eigensystem(vm *v, int nargs, value *args) { _eigensystem_cleanup: if (evec) object_free((object *) evec); if (otuple) object_free((object *) otuple); - morpho_freeobject(ev); // TODO: Free contents? + if (MORPHO_ISOBJECT(ev)) { + value evx; + objecttuple *t = MORPHO_GETTUPLE(ev); + for (int i=0; i Date: Sat, 27 Dec 2025 18:13:44 -0500 Subject: [PATCH 073/156] ComplexMatrix_div__xmatrix and divr --- src/xcomplexmatrix.c | 15 ++++++++++++++ src/xmatrix.c | 3 +-- src/xmatrix.h | 2 ++ .../complexmatrix_div_complexmatrix.morpho | 20 +++++++++++++++++++ .../complexmatrix_div_matrix.morpho | 20 +++++++++---------- .../complexmatrix_divr_matrix.morpho | 10 ++++++++++ 6 files changed, 57 insertions(+), 13 deletions(-) create mode 100644 test/arithmetic/complexmatrix_div_complexmatrix.morpho create mode 100644 test/arithmetic/complexmatrix_divr_matrix.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 8a922661..8481e4ef 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -347,6 +347,19 @@ value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, true); } +value ComplexMatrix_div__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; + objectxmatrix *new=xmatrix_clone(b); + if (new && _promote(v, A, &ap)) xmatrix_solve(ap, new); + return morpho_wrapandbind(v, (object *) new); +} + +value ComplexMatrix_divr__xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *A=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; + if (_promote(v, b, &bp)) xmatrix_solve(A, bp); // Promote the matrix that will contain the solution anyway + return morpho_wrapandbind(v, (object *) bp); +} + /** Computes the trace */ value ComplexMatrix_trace(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -456,7 +469,9 @@ MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (XMatrix)", ComplexMa MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_divr__xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, MORPHO_FN_PUREFN), diff --git a/src/xmatrix.c b/src/xmatrix.c index 6412b20c..ba8e996c 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -830,10 +830,9 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { value XMatrix_div__float(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; double scale; - morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale); + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; scale = 1.0/scale; if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); diff --git a/src/xmatrix.h b/src/xmatrix.h index e91db688..0da02183 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -197,6 +197,8 @@ linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, dou linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta); linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y); +linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b); + linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); diff --git a/test/arithmetic/complexmatrix_div_complexmatrix.morpho b/test/arithmetic/complexmatrix_div_complexmatrix.morpho new file mode 100644 index 00000000..ac0fbcfa --- /dev/null +++ b/test/arithmetic/complexmatrix_div_complexmatrix.morpho @@ -0,0 +1,20 @@ +// Divide ComplexMatrix by ComplexMatrix (solve linear system) +import newlinalg + +var A = ComplexMatrix(2,2) +A[0,0]=1 +A[0,1]=1-im +A[1,0]=1 +A[1,1]=1+1im + +var b = ComplexMatrix(2,1) +b[0,0]=1+1im +b[1,0]=2 + +print b / A +// expect: [ 2 + 1im ] +// expect: [ -0.5 - 0.5im ] + +print b +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] \ No newline at end of file diff --git a/test/arithmetic/complexmatrix_div_matrix.morpho b/test/arithmetic/complexmatrix_div_matrix.morpho index 0ca098a5..f2660d09 100644 --- a/test/arithmetic/complexmatrix_div_matrix.morpho +++ b/test/arithmetic/complexmatrix_div_matrix.morpho @@ -1,16 +1,14 @@ -// Divide ComplexMatrix by ComplexMatrix (solve linear system) +// Divide ComplexMatrix by XMatrix (solve linear system) import newlinalg -var A = ComplexMatrix(2,2) -A[0,0]=1 -A[0,1]=1-im -A[1,0]=1 -A[1,1]=1+1im +var A = XMatrix(((1,2),(-2,1))) -var b = ComplexMatrix(2,1) -b[0,0]=1+1im -b[1,0]=2 +var b = ComplexMatrix((1+im, 2)) print b / A -// expect: [ 2 + 1im ] -// expect: [ -0.5 - 0.5im ] +// expect: [ -0.6 + 0.2im ] +// expect: [ 0.8 + 0.4im ] + +print b +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] \ No newline at end of file diff --git a/test/arithmetic/complexmatrix_divr_matrix.morpho b/test/arithmetic/complexmatrix_divr_matrix.morpho new file mode 100644 index 00000000..7c9afe06 --- /dev/null +++ b/test/arithmetic/complexmatrix_divr_matrix.morpho @@ -0,0 +1,10 @@ +// Divide XMatrix by ComplexMatrix (solve linear system) +import newlinalg + +var A = ComplexMatrix(((1,2+im),(2-im,1))) + +var b = XMatrix((1, 2)) + +print b / A +// expect: [ 0.75 + 0.5im ] +// expect: [ 0 - 0.25im ] From a7767aed03f88968e72f62e48ceb37f710fc2f31 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 27 Dec 2025 18:15:24 -0500 Subject: [PATCH 074/156] Add line ending to a test --- test/arithmetic/complexmatrix_div_matrix.morpho | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/arithmetic/complexmatrix_div_matrix.morpho b/test/arithmetic/complexmatrix_div_matrix.morpho index f2660d09..1d3214a7 100644 --- a/test/arithmetic/complexmatrix_div_matrix.morpho +++ b/test/arithmetic/complexmatrix_div_matrix.morpho @@ -11,4 +11,4 @@ print b / A print b // expect: [ 1 + 1im ] -// expect: [ 2 + 0im ] \ No newline at end of file +// expect: [ 2 + 0im ] From 70e9aa1a57b5ebfae1e1c618e8c8e98b35a6cefd Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Sat, 3 Jan 2026 13:45:11 -0500 Subject: [PATCH 075/156] Outer product --- src/xmatrix.c | 21 +++++++++++++++++++++ src/xmatrix.h | 1 + test/methods/matrix_outer.morpho | 10 ++++++++++ 3 files changed, 32 insertions(+) create mode 100644 test/methods/matrix_outer.morpho diff --git a/src/xmatrix.c b/src/xmatrix.c index ba8e996c..3cf18ebf 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -422,6 +422,15 @@ linalgError_t xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { return LINALGERR_OK; } +/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ +linalgError_t xmatrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, objectxmatrix *c) { + MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; + if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dger(CblasColMajor, m, n, alpha, a->elements, 1, b->elements, 1, c->elements, c->nrows); + return LINALGERR_OK; +} + /** Solve the linear system a.x = b using stack allocated memory for temporary */ linalgError_t xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { int pivot[a->nrows]; @@ -1024,6 +1033,17 @@ value XMatrix_inner(vm *v, int nargs, value *args) { return MORPHO_FLOAT(prod); } +/** Outer product */ +value XMatrix_outer(vm *v, int nargs, value *args) { + objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + + objectxmatrix *new=xmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + if (new) LINALG_ERRCHECKVM(xmatrix_r1update(1.0, a, b, new)); + + return morpho_wrapandbind(v, (object *) new); +} + /* --------- * Metadata * --------- */ @@ -1129,6 +1149,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, MORPHO_FN_PU MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "XMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix ()", XMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 0da02183..af101c57 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -124,6 +124,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" +#define XMATRIX_OUTER_METHOD "outer" #define XMATRIX_RESHAPE_METHOD "reshape" #define XMATRIX_ROLL_METHOD "roll" #define XMATRIX_SETCOLUMN_METHOD "setColumn" diff --git a/test/methods/matrix_outer.morpho b/test/methods/matrix_outer.morpho new file mode 100644 index 00000000..0e49615e --- /dev/null +++ b/test/methods/matrix_outer.morpho @@ -0,0 +1,10 @@ +// Outer product of two vectors +import newlinalg + +var A = XMatrix((1,2,3)) +var B = XMatrix((4,5)) + +print A.outer(B) +// expect: [ 4 5 ] +// expect: [ 8 10 ] +// expect: [ 12 15 ] From 5ceb32adca24a38ca5d2c938d512e28d135b7afc Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Mon, 5 Jan 2026 11:12:00 -0500 Subject: [PATCH 076/156] complexmatrix_r1update --- src/xcomplexmatrix.c | 27 +++++++++++++++++++++++-- src/xmatrix.c | 6 ++---- test/methods/complexmatrix_outer.morpho | 10 +++++++++ 3 files changed, 37 insertions(+), 6 deletions(-) create mode 100644 test/methods/complexmatrix_outer.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 8481e4ef..1bc1603b 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -191,6 +191,17 @@ linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b return LINALGERR_OK; } +/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ +linalgError_t complexmatrix_r1update(MorphoComplex alpha, objectcomplexmatrix *a, objectcomplexmatrix *b, objectcomplexmatrix *c) { + MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; + if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zgeru(CblasColMajor, m, n, (__LAPACK_double_complex *) &alpha, (__LAPACK_double_complex *) a->elements, 1, + (__LAPACK_double_complex *) b->elements, 1, + (__LAPACK_double_complex *) c->elements, c->nrows); + return LINALGERR_OK; +} + /** Calculate the trace of a matrix */ linalgError_t complexmatrix_trace(objectcomplexmatrix *a, MorphoComplex *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; @@ -424,8 +435,8 @@ value ComplexMatrix_conjTranspose(vm *v, int nargs, value *args) { /** Frobenius inner product */ value ComplexMatrix_inner(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); MorphoComplex prod=MCBuild(0.0, 0.0); value out = MORPHO_NIL; @@ -437,6 +448,17 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { return out; } +/** Outer product */ +value ComplexMatrix_outer(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + if (new) LINALG_ERRCHECKVM(complexmatrix_r1update(MCBuild(1.0,0.0), a, b, new)); + + return morpho_wrapandbind(v, (object *) new); +} + MORPHO_BEGINCLASS(ComplexMatrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), @@ -484,6 +506,7 @@ MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "XMatrix ()", ComplexMatrix_imag, B MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 3cf18ebf..c38d614d 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -105,7 +105,7 @@ char xmatrix_normtolapack(xmatrix_norm_t norm) { /** Evaluate norms */ static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { char cnrm = xmatrix_normtolapack(nrm); - int nrows=a->nrows, ncols=a->ncols, info; + int nrows=a->nrows, ncols=a->ncols; #ifdef MORPHO_LINALG_USE_LAPACKE return LAPACKE_dlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); @@ -679,7 +679,6 @@ value XMatrix_assign(vm *v, int nargs, value *args) { /** Clones a matrix */ value XMatrix_clone(vm *v, int nargs, value *args) { - value out=MORPHO_NIL; objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *new=xmatrix_clone(a); return morpho_wrapandbind(v, (object *) new); @@ -814,7 +813,6 @@ value XMatrix_subr__x(vm *v, int nargs, value *args) { value XMatrix_mul__float(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; double scale; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; @@ -1149,7 +1147,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, MORPHO_FN_PU MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "XMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix ()", XMatrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix (XMatrix)", XMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), diff --git a/test/methods/complexmatrix_outer.morpho b/test/methods/complexmatrix_outer.morpho new file mode 100644 index 00000000..2999f4e3 --- /dev/null +++ b/test/methods/complexmatrix_outer.morpho @@ -0,0 +1,10 @@ +// Outer product of two vectors +import newlinalg + +var A = ComplexMatrix((1+1im,2-2im,3+3im)) +var B = ComplexMatrix((4+4im,5-5im)) + +print A.outer(B) +// expect: [ 0 + 8im 10 + 0im ] +// expect: [ 16 + 0im 0 - 20im ] +// expect: [ 0 + 24im 30 + 0im ] From ba438324bdbd982b651dee7c53d3310af08faa99 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Mon, 5 Jan 2026 18:56:45 -0500 Subject: [PATCH 077/156] Matrix slices --- CMakeLists.txt | 1 + src/xcomplexmatrix.c | 1 + src/xmatrix.c | 47 +++++++++++++++++++ src/xmatrix.h | 5 +- test/index/complexmatrix_slice.morpho | 25 ++++++++++ test/index/matrix_slice.morpho | 25 ++++++++++ test/index/matrix_slice_bounds.morpho | 7 +++ test/index/matrix_slice_infinite_range.morpho | 7 +++ 8 files changed, 116 insertions(+), 2 deletions(-) create mode 100644 test/index/complexmatrix_slice.morpho create mode 100644 test/index/matrix_slice.morpho create mode 100644 test/index/matrix_slice_bounds.morpho create mode 100644 test/index/matrix_slice_infinite_range.morpho diff --git a/CMakeLists.txt b/CMakeLists.txt index 3b3a8801..65d6d5c5 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -22,6 +22,7 @@ find_file(MORPHO_HEADER /usr/local/opt/morpho /opt/homebrew/opt/morpho /usr/local/include/morpho + "C:\\Program Files\\Morpho\\include\\" ) # Identify folder that morpho.h is located in from MORPHO_HEADER and store in MORPHO_INCLUDE diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 1bc1603b..237202f9 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -466,6 +466,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", XMatrix_index__x_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index c38d614d..36ae000f 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -701,6 +701,52 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { return out; } +static bool _slice_count(value in, MatrixIdx_t *count) { + if (morpho_isnumber(in)) { *count=1; return true; } + else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return true; } + return false; +} + +static bool _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { + value val=in; + if (MORPHO_ISRANGE(in)) val=range_iterate(MORPHO_GETRANGE(in), i); + + if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return true; } + else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return true; } + return false; +} + +value XMatrix_index__x_x(vm *v, int nargs, value *args) { + objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); + MatrixIdx_t icnt=0, jcnt=0; // Size of the new matrix + + if (!_slice_count(iv, &icnt) || icnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + if (!_slice_count(jv, &jcnt) || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + objectxmatrix *new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); + + double *src, *dest; + if (new) for (MatrixIdx_t j=0; jnvals); + } + } + + return morpho_wrapandbind(v, (object *) new); + +XMatrix_index__x_x_cleanup: + object_free((object *) new); + return MORPHO_NIL; +} + /* --------- * setindex() * --------- */ @@ -1121,6 +1167,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILT MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "XMatrix (_,_)", XMatrix_index__x_x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index af101c57..a75764eb 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -18,8 +18,8 @@ extern objecttype objectxmatrixtype; extern objecttypedefn objectxmatrixdefn; -typedef int MatrixIdx_t; -typedef size_t MatrixCount_t; +typedef int MatrixIdx_t; // Type used for matrix indices +typedef size_t MatrixCount_t; // Type used to count total number of elements /** Matrices are a purely numerical collection type oriented toward linear algebra. Elements are stored in column-major format, i.e. @@ -146,6 +146,7 @@ IMPLEMENTATIONFN(XMatrix_clone); IMPLEMENTATIONFN(XMatrix_index__int); IMPLEMENTATIONFN(XMatrix_index__int_int); +IMPLEMENTATIONFN(XMatrix_index__x_x); IMPLEMENTATIONFN(XMatrix_setindex__int_x); IMPLEMENTATIONFN(XMatrix_setindex__int_int_x); diff --git a/test/index/complexmatrix_slice.morpho b/test/index/complexmatrix_slice.morpho new file mode 100644 index 00000000..1cd98c29 --- /dev/null +++ b/test/index/complexmatrix_slice.morpho @@ -0,0 +1,25 @@ +// Slice a ComplexMatrix +import newlinalg + +var A = ComplexMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16)))*(1+1im) + +print A[0..1, 0..1] +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 5 + 5im 6 + 6im ] + +print A[0..2, 0] +// expect: [ 1 + 1im ] +// expect: [ 5 + 5im ] +// expect: [ 9 + 9im ] + +print A[2..0:-1, 0] +// expect: [ 9 + 9im ] +// expect: [ 5 + 5im ] +// expect: [ 1 + 1im ] + +print A[0..3:2, 0..3:2] +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 9 + 9im 11 + 11im ] + +print A[0..1:2, "Foo"] +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/index/matrix_slice.morpho b/test/index/matrix_slice.morpho new file mode 100644 index 00000000..e3afff95 --- /dev/null +++ b/test/index/matrix_slice.morpho @@ -0,0 +1,25 @@ +// Slice a Matrix +import newlinalg + +var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..1, 0..1] +// expect: [ 1 2 ] +// expect: [ 5 6 ] + +print A[0..2, 0] +// expect: [ 1 ] +// expect: [ 5 ] +// expect: [ 9 ] + +print A[2..0:-1, 0] +// expect: [ 9 ] +// expect: [ 5 ] +// expect: [ 1 ] + +print A[0..3:2, 0..3:2] +// expect: [ 1 3 ] +// expect: [ 9 11 ] + +print A[0..1:2, "Foo"] +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/index/matrix_slice_bounds.morpho b/test/index/matrix_slice_bounds.morpho new file mode 100644 index 00000000..c5676056 --- /dev/null +++ b/test/index/matrix_slice_bounds.morpho @@ -0,0 +1,7 @@ +// Slice a Matrix out of bounds +import newlinalg + +var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..5, 0..2] +// expect error 'LnAlgMtrxIndxBnds' diff --git a/test/index/matrix_slice_infinite_range.morpho b/test/index/matrix_slice_infinite_range.morpho new file mode 100644 index 00000000..b8724575 --- /dev/null +++ b/test/index/matrix_slice_infinite_range.morpho @@ -0,0 +1,7 @@ +// Slice a Matrix with a range that doesn't halt +import newlinalg + +var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..3:-1, 0] +// expect error 'LnAlgMtrxInvldArg' From 8b7e722ee063fbfa23a9d6c95d6983d1fa7ebed0 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Mon, 5 Jan 2026 19:17:36 -0500 Subject: [PATCH 078/156] Improvements to slice --- src/xmatrix.c | 35 +++++++++++++++------------ test/index/complexmatrix_slice.morpho | 2 +- test/index/matrix_slice.morpho | 2 +- 3 files changed, 21 insertions(+), 18 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index 36ae000f..b35f0af8 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -701,39 +701,42 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { return out; } -static bool _slice_count(value in, MatrixIdx_t *count) { - if (morpho_isnumber(in)) { *count=1; return true; } - else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return true; } - return false; +static linalgError_t _slice_count(value in, MatrixIdx_t *count) { + if (morpho_isnumber(in)) { *count=1; return LINALGERR_OK; } + else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return LINALGERR_OK; } + return LINALGERR_NON_NUMERICAL; } -static bool _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { +static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { value val=in; if (MORPHO_ISRANGE(in)) val=range_iterate(MORPHO_GETRANGE(in), i); - if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return true; } - else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return true; } - return false; + if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return LINALGERR_OK; } + else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return LINALGERR_OK; } + return LINALGERR_OP_FAILED; } value XMatrix_index__x_x(vm *v, int nargs, value *args) { - objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)), *new=NULL; value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); MatrixIdx_t icnt=0, jcnt=0; // Size of the new matrix - if (!_slice_count(iv, &icnt) || icnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - if (!_slice_count(jv, &jcnt) || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + LINALG_ERRCHECKVMGOTO(_slice_count(iv, &icnt), XMatrix_index__x_x_cleanup); + LINALG_ERRCHECKVMGOTO(_slice_count(jv, &jcnt), XMatrix_index__x_x_cleanup); + + if (icnt<1 || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - objectxmatrix *new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); + new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } double *src, *dest; - if (new) for (MatrixIdx_t j=0; jnvals); @@ -743,7 +746,7 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); XMatrix_index__x_x_cleanup: - object_free((object *) new); + if (new) object_free((object *) new); return MORPHO_NIL; } diff --git a/test/index/complexmatrix_slice.morpho b/test/index/complexmatrix_slice.morpho index 1cd98c29..0690a8e1 100644 --- a/test/index/complexmatrix_slice.morpho +++ b/test/index/complexmatrix_slice.morpho @@ -22,4 +22,4 @@ print A[0..3:2, 0..3:2] // expect: [ 9 + 9im 11 + 11im ] print A[0..1:2, "Foo"] -// expect error 'LnAlgMtrxInvldArg' +// expect error 'LnAlgMtrxNnNmrclArg' diff --git a/test/index/matrix_slice.morpho b/test/index/matrix_slice.morpho index e3afff95..0a8387b4 100644 --- a/test/index/matrix_slice.morpho +++ b/test/index/matrix_slice.morpho @@ -22,4 +22,4 @@ print A[0..3:2, 0..3:2] // expect: [ 9 11 ] print A[0..1:2, "Foo"] -// expect error 'LnAlgMtrxInvldArg' +// expect error 'LnAlgMtrxNnNmrclArg' From b07203e33cc3b8699b89b29f8f32b9b5df5bf4d4 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Mon, 5 Jan 2026 20:58:55 -0500 Subject: [PATCH 079/156] Matrix_setindex uses slices --- src/newlinalg.h | 3 ++ src/xmatrix.c | 34 ++++++++++++++++++--- test/index/matrix_setslice.morpho | 49 +++++++++++++++++++++++++++++++ 3 files changed, 82 insertions(+), 4 deletions(-) create mode 100644 test/index/matrix_setslice.morpho diff --git a/src/newlinalg.h b/src/newlinalg.h index 415ad80d..80e754bd 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -76,6 +76,9 @@ void linalg_raiseerror(vm *v, linalgError_t err); /** As for LINALG_ERRCHECKVM but additionally jumps to a given label */ #define LINALG_ERRCHECKVMGOTO(f, label) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto label; }} +/** As for LINALG_ERRCHECKVM but additionally returnsl */ +#define LINALG_ERRCHECKVMRETURN(f, ret) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); return ret; }} + /* ------------------------------------------------------- * Include the rest of the library * ------------------------------------------------------- */ diff --git a/src/xmatrix.c b/src/xmatrix.c index b35f0af8..22f625be 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -720,11 +720,10 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)), *new=NULL; value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); - MatrixIdx_t icnt=0, jcnt=0; // Size of the new matrix - - LINALG_ERRCHECKVMGOTO(_slice_count(iv, &icnt), XMatrix_index__x_x_cleanup); - LINALG_ERRCHECKVMGOTO(_slice_count(jv, &jcnt), XMatrix_index__x_x_cleanup); + MatrixIdx_t icnt=0, jcnt=0; // Size of the new matrix + LINALG_ERRCHECKVMRETURN(_slice_count(iv, &icnt), MORPHO_NIL); + LINALG_ERRCHECKVMRETURN(_slice_count(jv, &jcnt), MORPHO_NIL); if (icnt<1 || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); @@ -773,6 +772,32 @@ value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { return MORPHO_NIL; } +value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { + objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectxmatrix *msrc = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 2)); + value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); + + MatrixIdx_t icnt=0, jcnt=0; + LINALG_ERRCHECKVMRETURN(_slice_count(iv, &icnt), MORPHO_NIL); + LINALG_ERRCHECKVMRETURN(_slice_count(jv, &jcnt), MORPHO_NIL); + if (icnt<1 || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + double *src, *dest; + for (MatrixIdx_t j=0; jnvals); + } + } + + return MORPHO_NIL; +} + /* --------- * column * --------- */ @@ -1173,6 +1198,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_inde MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "XMatrix (_,_)", XMatrix_index__x_x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,XMatrix)", XMatrix_setindex__x_x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/test/index/matrix_setslice.morpho b/test/index/matrix_setslice.morpho new file mode 100644 index 00000000..093a8446 --- /dev/null +++ b/test/index/matrix_setslice.morpho @@ -0,0 +1,49 @@ +// Copy elements of a Matrix using slices +import newlinalg + +var A = XMatrix(((1,2),(3,4))) + +var B = XMatrix(4,4) + +B[0..1, 0..1] = A +print B +// expect: [ 1 2 0 0 ] +// expect: [ 3 4 0 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 0 0 0 ] + +var C = XMatrix(4,4) +C[0..2:2, 0..2:2] = A +print C +// expect: [ 1 0 2 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 3 0 4 0 ] +// expect: [ 0 0 0 0 ] + +var D = XMatrix(4,4) +D[1..2, 1..2] = A +print D +// expect: [ 0 0 0 0 ] +// expect: [ 0 1 2 0 ] +// expect: [ 0 3 4 0 ] +// expect: [ 0 0 0 0 ] + +var E = XMatrix(4,4) +E[1..3:2, 1..3:2] = A +print E +// expect: [ 0 0 0 0 ] +// expect: [ 0 1 0 2 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 3 0 4 ] + +var F = XMatrix(4,4) +F[0..1, 0] = A[0..1, 1] +print F +// expect: [ 2 0 0 0 ] +// expect: [ 4 0 0 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 0 0 0 ] + +B[0..5, 0..5] = A +print B +// expect error 'LnAlgMtrxIndxBnds' \ No newline at end of file From f9b2027cc68b7be311dceaaa2c4c3d5325260ce0 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Mon, 5 Jan 2026 21:18:04 -0500 Subject: [PATCH 080/156] Merge validation --- src/xmatrix.c | 17 ++++++++++------- 1 file changed, 10 insertions(+), 7 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index 22f625be..241fc699 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -716,15 +716,20 @@ static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { return LINALGERR_OP_FAILED; } +static bool _slice_validate(vm *v, value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { + LINALG_ERRCHECKVMRETURN(_slice_count(iv, icnt), false); + LINALG_ERRCHECKVMRETURN(_slice_count(jv, jcnt), false); + if (*icnt<1 || *jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return false; } + return true; +} + value XMatrix_index__x_x(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)), *new=NULL; value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); - MatrixIdx_t icnt=0, jcnt=0; // Size of the new matrix - LINALG_ERRCHECKVMRETURN(_slice_count(iv, &icnt), MORPHO_NIL); - LINALG_ERRCHECKVMRETURN(_slice_count(jv, &jcnt), MORPHO_NIL); - if (icnt<1 || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix + if (!_slice_validate(v, iv, jv, &icnt, &jcnt)) return MORPHO_NIL; new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } @@ -778,9 +783,7 @@ value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); MatrixIdx_t icnt=0, jcnt=0; - LINALG_ERRCHECKVMRETURN(_slice_count(iv, &icnt), MORPHO_NIL); - LINALG_ERRCHECKVMRETURN(_slice_count(jv, &jcnt), MORPHO_NIL); - if (icnt<1 || jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + if (!_slice_validate(v, iv, jv, &icnt, &jcnt)) return MORPHO_NIL; double *src, *dest; for (MatrixIdx_t j=0; j Date: Tue, 6 Jan 2026 00:09:20 -0500 Subject: [PATCH 081/156] Change interface to _slice_validate --- src/newlinalg.c | 1 + src/newlinalg.h | 6 +++++- src/xmatrix.c | 14 +++++++------- 3 files changed, 13 insertions(+), 8 deletions(-) diff --git a/src/newlinalg.c b/src/newlinalg.c index 4dbdfabc..4caadffb 100644 --- a/src/newlinalg.c +++ b/src/newlinalg.c @@ -24,6 +24,7 @@ void linalg_raiseerror(vm *v, linalgError_t err) { case LINALGERR_OP_FAILED: morpho_runtimeerror(v, LINALG_OPFAILED); break; case LINALGERR_NOT_SUPPORTED: morpho_runtimeerror(v, LINALG_NOTSUPPORTED); break; case LINALGERR_NON_NUMERICAL: morpho_runtimeerror(v, LINALG_NNNMRCL_ARG); break; + case LINALGERR_INVLD_ARG: morpho_runtimeerror(v, LINALG_INVLDARGS); break; case LINALGERR_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; } } diff --git a/src/newlinalg.h b/src/newlinalg.h index 80e754bd..70d3f237 100644 --- a/src/newlinalg.h +++ b/src/newlinalg.h @@ -25,6 +25,7 @@ typedef enum { LINALGERR_OP_FAILED, // Matrix operation failed LINALGERR_NOT_SUPPORTED, // Operation not supported for this matrix type LINALGERR_NON_NUMERICAL, // Non numerical args supplied + LINALGERR_INVLD_ARG, // Invalid argument supplied LINALGERR_ALLOC // Memory allocation failed } linalgError_t; @@ -68,7 +69,7 @@ typedef enum { void linalg_raiseerror(vm *v, linalgError_t err); -/** Macro to simplify error checking: +/** Macros to simplify error checking: - evaluates expression f that returns linalgError_t; - if an error occurred, raises the corresponding error in a vm called v */ #define LINALG_ERRCHECKVM(f) { linalgError_t err = f; if (err!=LINALGERR_OK) linalg_raiseerror(v, err); } @@ -79,6 +80,9 @@ void linalg_raiseerror(vm *v, linalgError_t err); /** As for LINALG_ERRCHECKVM but additionally returnsl */ #define LINALG_ERRCHECKVMRETURN(f, ret) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); return ret; }} +/** Similar to the above, except returns the error rather than raising it */ +#define LINALG_ERRCHECKRETURN(f) { linalgError_t err = f; if (err!=LINALGERR_OK) return err; } + /* ------------------------------------------------------- * Include the rest of the library * ------------------------------------------------------- */ diff --git a/src/xmatrix.c b/src/xmatrix.c index 241fc699..b3bf1e4a 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -716,11 +716,11 @@ static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { return LINALGERR_OP_FAILED; } -static bool _slice_validate(vm *v, value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { - LINALG_ERRCHECKVMRETURN(_slice_count(iv, icnt), false); - LINALG_ERRCHECKVMRETURN(_slice_count(jv, jcnt), false); - if (*icnt<1 || *jcnt<1) { morpho_runtimeerror(v, LINALG_INVLDARGS); return false; } - return true; +static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { + LINALG_ERRCHECKRETURN(_slice_count(iv, icnt)); + LINALG_ERRCHECKRETURN(_slice_count(jv, jcnt)); + if (*icnt<1 || *jcnt<1) return LINALGERR_INVLD_ARG; + return LINALGERR_OK; } value XMatrix_index__x_x(vm *v, int nargs, value *args) { @@ -729,7 +729,7 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix - if (!_slice_validate(v, iv, jv, &icnt, &jcnt)) return MORPHO_NIL; + LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } @@ -783,7 +783,7 @@ value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); MatrixIdx_t icnt=0, jcnt=0; - if (!_slice_validate(v, iv, jv, &icnt, &jcnt)) return MORPHO_NIL; + LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); double *src, *dest; for (MatrixIdx_t j=0; j Date: Tue, 6 Jan 2026 00:22:03 -0500 Subject: [PATCH 082/156] Consolidate copy loop into _slice_copy --- src/xmatrix.c | 55 ++++++++++++++++++++++----------------------------- 1 file changed, 24 insertions(+), 31 deletions(-) diff --git a/src/xmatrix.c b/src/xmatrix.c index b3bf1e4a..7a9814e2 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -723,10 +723,27 @@ static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, Matr return LINALGERR_OK; } +static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx_t jcnt, objectxmatrix *a, objectxmatrix *b, bool swap) { + double *ael, *bel; + for (MatrixIdx_t j=0; jnvals); + else memcpy(bel, ael, sizeof(double)*a->nvals); + } + } + return LINALGERR_OK; +} + value XMatrix_index__x_x(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)), *new=NULL; - value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); + value out=MORPHO_NIL; MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); @@ -734,24 +751,11 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - double *src, *dest; - for (MatrixIdx_t j=0; jnvals); - } - } - - return morpho_wrapandbind(v, (object *) new); + linalgError_t err=_slice_copy(iv, jv, icnt, jcnt, m, new, false); + if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); object_free((object *) new); } + else out = morpho_wrapandbind(v, (object *) new); -XMatrix_index__x_x_cleanup: - if (new) object_free((object *) new); - return MORPHO_NIL; + return out; } /* --------- @@ -785,19 +789,8 @@ value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { MatrixIdx_t icnt=0, jcnt=0; LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); - double *src, *dest; - for (MatrixIdx_t j=0; jnvals); - } - } - + LINALG_ERRCHECKVM(_slice_copy(iv, jv, icnt, jcnt, m, msrc, true)); + return MORPHO_NIL; } From ca0cb9b21a7a916c118420f28f1ffafbf67e3d15 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Tue, 6 Jan 2026 00:28:31 -0500 Subject: [PATCH 083/156] complexmatrix_setslice --- src/xcomplexmatrix.c | 1 + src/xmatrix.c | 2 +- src/xmatrix.h | 1 + test/index/complexmatrix_setslice.morpho | 50 ++++++++++++++++++++++++ 4 files changed, 53 insertions(+), 1 deletion(-) create mode 100644 test/index/complexmatrix_setslice.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 237202f9..453a7b02 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -469,6 +469,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_in MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", XMatrix_index__x_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", XMatrix_setindex__x_x_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 7a9814e2..3d9b1cbf 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -734,7 +734,7 @@ static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx LINALG_ERRCHECKRETURN(xmatrix_getelementptr(a, ix, jx, &ael)); LINALG_ERRCHECKRETURN(xmatrix_getelementptr(b, i, j, &bel)); if (swap) memcpy(ael, bel, sizeof(double)*a->nvals); - else memcpy(bel, ael, sizeof(double)*a->nvals); + else memcpy(bel, ael, sizeof(double)*b->nvals); } } return LINALGERR_OK; diff --git a/src/xmatrix.h b/src/xmatrix.h index a75764eb..78dd312e 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -149,6 +149,7 @@ IMPLEMENTATIONFN(XMatrix_index__int_int); IMPLEMENTATIONFN(XMatrix_index__x_x); IMPLEMENTATIONFN(XMatrix_setindex__int_x); IMPLEMENTATIONFN(XMatrix_setindex__int_int_x); +IMPLEMENTATIONFN(XMatrix_setindex__x_x_xmatrix); IMPLEMENTATIONFN(XMatrix_getcolumn__int); IMPLEMENTATIONFN(XMatrix_setcolumn__int_xmatrix); diff --git a/test/index/complexmatrix_setslice.morpho b/test/index/complexmatrix_setslice.morpho new file mode 100644 index 00000000..57f187ea --- /dev/null +++ b/test/index/complexmatrix_setslice.morpho @@ -0,0 +1,50 @@ +// Copy elements of a ComplexMatrix using slices +import newlinalg + +var A = ComplexMatrix(((1+1im,2+2im),(3+3im,4+4im))) + +var B = ComplexMatrix(4,4) + +B[0..1, 0..1] = A +print B +// expect: [ 1 + 1im 2 + 2im 0 + 0im 0 + 0im ] +// expect: [ 3 + 3im 4 + 4im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var C = ComplexMatrix(4,4) +C[0..2:2, 0..2:2] = A +print C +// expect: [ 1 + 1im 0 + 0im 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 3 + 3im 0 + 0im 4 + 4im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var D = ComplexMatrix(4,4) +D[1..2, 1..2] = A +print D +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 1 + 1im 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 3 + 3im 4 + 4im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var E = ComplexMatrix(4,4) +E[1..3:2, 1..3:2] = A +print E +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 1 + 1im 0 + 0im 2 + 2im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 3 + 3im 0 + 0im 4 + 4im ] + +var F = ComplexMatrix(4,4) +F[0..1, 0] = A[0..1, 1] +print F +// expect: [ 2 + 2im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 4 + 4im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +B[0..5, 0..5] = A +print B +// expect error 'LnAlgMtrxIndxBnds' + From 444efe95caf0fa41ade486fb53336bcbf485a412 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 10:24:37 -0500 Subject: [PATCH 084/156] Singular value decomposition for real matrices --- src/xmatrix.c | 122 +++++++++++++++++++++++++++++++++ src/xmatrix.h | 4 ++ test/methods/matrix_svd.morpho | 53 ++++++++++++++ 3 files changed, 179 insertions(+) create mode 100644 test/methods/matrix_svd.morpho diff --git a/src/xmatrix.c b/src/xmatrix.c index 3d9b1cbf..c461441b 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -1004,6 +1004,10 @@ value XMatrix_inverse(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +/* ---------------- + * Eigensystem + * ---------------- */ + static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { value ev[n]; for (int i=0; inrows, n=a->ncols; + int minmn = (m < n) ? m : n; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, + (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U + (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT + m, n, + a->elements, m, // input matrix A (overwritten) + s, // singular values (min(m,n)) + (u ? u->elements : NULL), m, // U matrix (m×m) + (vt ? vt->elements : NULL), n // VT matrix (n×n) + ); +#else + int lwork = -1; + double work_query; + // Query optimal work size + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + lwork = (int)work_query; + double work[lwork]; + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + work, &lwork, &info); +#endif + + return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/** Interface to SVD */ +linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { + if (u && ((a->nrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + if (vt && ((a->ncols != vt->nrows) || (a->ncols != vt->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + + objectxmatrix *temp = xmatrix_clone(a); + if (!temp) return LINALGERR_ALLOC; + + linalgError_t err = _svd(temp, s, u, vt); + object_free((object *) temp); + return err; +} + +/** Processes singular values into a tuple */ +static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) { + value sv[n]; + for (int i = 0; i < n; i++) sv[i] = MORPHO_NIL; + for (int i = 0; i < n; i++) { + sv[i] = MORPHO_FLOAT(s[i]); + } + + objecttuple *new = object_newtuple(n, sv); + if (!new) { + for (int i = 0; i < n; i++) morpho_freeobject(sv[i]); + return false; + } + + *out = MORPHO_OBJECT(new); + return true; +} + +#define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } + +/** Singular Value Decomposition */ +value XMatrix_svd(vm *v, int nargs, value *args) { + objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + value s = MORPHO_NIL; // Will hold singular values + objectxmatrix *u = NULL; // Left singular vectors + objectxmatrix *vt = NULL; // Right singular vectors (transposed) + objecttuple *otuple = NULL; // Tuple to return everything + + MatrixIdx_t m = a->nrows, n = a->ncols; + MatrixIdx_t minmn = (m < n) ? m : n; + double singular_values[minmn]; + + // Allocate U (m×m) and VT (n×n) matrices + u = xmatrix_new(m, m, false); + _CHK_SVD(u); + + vt = xmatrix_new(n, n, false); + _CHK_SVD(vt); + + linalgError_t err = xmatrix_svd(a, singular_values, u, vt); + if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _svd_cleanup; } + + _CHK_SVD(_processsingularvalues(v, minmn, singular_values, &s)); + + value outtuple[3] = { MORPHO_OBJECT(u), s, MORPHO_OBJECT(vt) }; + otuple = object_newtuple(3, outtuple); + _CHK_SVD(otuple); + + return morpho_wrapandbind(v, (object *) otuple); + +_svd_cleanup: + if (u) object_free((object *) u); + if (vt) object_free((object *) vt); + if (otuple) object_free((object *) otuple); + if (MORPHO_ISOBJECT(s)) { + value svx; + objecttuple *t = MORPHO_GETTUPLE(s); + for (int i = 0; i < tuple_length(t); i++) if (tuple_getelement(t, i, &svx)) morpho_freeobject(svx); + } + morpho_freeobject(s); + + return MORPHO_NIL; +} +#undef _CHK_SVD + /* --------- * Products * --------- */ @@ -1222,6 +1343,7 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix (XMatrix)", XMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index 78dd312e..a4ef35c2 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -121,6 +121,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_DIMENSIONS_METHOD "dimensions" #define XMATRIX_EIGENVALUES_METHOD "eigenvalues" #define XMATRIX_EIGENSYSTEM_METHOD "eigensystem" +#define XMATRIX_SVD_METHOD "svd" #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" @@ -171,6 +172,7 @@ IMPLEMENTATIONFN(XMatrix_sum); IMPLEMENTATIONFN(XMatrix_transpose); IMPLEMENTATIONFN(XMatrix_eigenvalues); IMPLEMENTATIONFN(XMatrix_eigensystem); +IMPLEMENTATIONFN(XMatrix_svd); IMPLEMENTATIONFN(XMatrix_reshape); IMPLEMENTATIONFN(XMatrix_roll__int); IMPLEMENTATIONFN(XMatrix_roll__int_int); @@ -202,6 +204,8 @@ linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y); linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b); +linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); + linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); diff --git a/test/methods/matrix_svd.morpho b/test/methods/matrix_svd.morpho new file mode 100644 index 00000000..4a4e20b1 --- /dev/null +++ b/test/methods/matrix_svd.morpho @@ -0,0 +1,53 @@ +// Singular Value Decomposition +import newlinalg + +var A = XMatrix(((1,0),(0,2))) + +var svd = A.svd() + +print svd +// expect: (, (2, 1), ) + +print (svd[0] - XMatrix(((0,1),(1,0)))).norm() < 1e-10 +// expect: true + +print svd[1] +// expect: (2, 1) + +print (svd[2] - XMatrix(((0,1),(1,0)))).norm() < 1e-10 + +// Test reconstruction: U * S * V^T should approximately equal A +var U = svd[0] +var S = svd[1] +var V = svd[2] + +// Create diagonal matrix from singular values +var Sdiag = XMatrix(2,2) +Sdiag[0,0] = S[0] +Sdiag[1,1] = S[1] + +var VT = V.transpose() +var reconstructed = U * Sdiag * VT + +print (reconstructed - A).norm() < 1e-10 +// expect: true + +// Test with a non-square matrix +var B = XMatrix(3,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=2 +B[2,0]=0 +B[2,1]=0 + +var svd2 = B.svd() + +print svd2[0].dimensions() +// expect: (3, 3) + +print svd2[1] +// expect: (2, 1) + +print svd2[2].dimensions() +// expect: (2, 2) From 62a2fc0370be6dbc04944eb6b8bb2544c0c29142 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 11:07:52 -0500 Subject: [PATCH 085/156] Complex SVD --- src/xcomplexmatrix.c | 45 ++++++++++++- src/xmatrix.c | 93 ++++++++++++--------------- src/xmatrix.h | 11 +++- test/methods/complexmatrix_svd.morpho | 22 +++++++ 4 files changed, 117 insertions(+), 54 deletions(-) create mode 100644 test/methods/complexmatrix_svd.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index 453a7b02..bdb63e00 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -97,6 +97,47 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level SVD */ +static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zgesvd(LAPACK_COL_MAJOR, + (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U + (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT + m, n, + (__LAPACK_double_complex *) a->elements, m, // input matrix A (overwritten) + s, // singular values (min(m,n)) + (__LAPACK_double_complex *) (u ? u->elements : NULL), m, // U matrix (m×m) + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), n // VT matrix (n×n) + ); +#else + int lwork = -1; + __LAPACK_double_complex work_query; + double rwork[5 * minmn]; // rwork needs at least 5*min(m,n) for zgesvd + + // Query optimal work size + zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, + (__LAPACK_double_complex *) a->elements, &m, s, + (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + &work_query, &lwork, rwork, &info); + + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + lwork = (int)creal(work_query); + __LAPACK_double_complex work[lwork]; + zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, + (__LAPACK_double_complex *) a->elements, &m, s, + (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + work, &lwork, rwork, &info); +#endif + + return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Interface definition * ---------------------- */ @@ -108,7 +149,8 @@ matrixinterfacedefn complexmatrixdefn = { .setelfn = _setelfn, .normfn = _normfn, .solvefn = _solve, - .eigenfn = _eigen + .eigenfn = _eigen, + .svdfn = _svd }; /* ---------------------- @@ -511,6 +553,7 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index c461441b..960869fb 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -143,6 +143,40 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level SVD */ +static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, + (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U + (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT + m, n, + a->elements, m, // input matrix A (overwritten) + s, // singular values (min(m,n)) + (u ? u->elements : NULL), m, // U matrix (m×m) + (vt ? vt->elements : NULL), n // VT matrix (n×n) + ); +#else + int lwork = -1; + double work_query; + // Query optimal work size + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + lwork = (int)work_query; + double work[lwork]; + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + work, &lwork, &info); +#endif + + return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + /* ---------------------- * Interface definition * ---------------------- */ @@ -154,7 +188,8 @@ matrixinterfacedefn xmatrixdefn = { .setelfn = _setelfn, .normfn = _normfn, .solvefn = _solve, - .eigenfn = _eigen + .eigenfn = _eigen, + .svdfn = _svd }; /* ---------------------- @@ -1094,40 +1129,6 @@ value XMatrix_eigensystem(vm *v, int nargs, value *args) { * SVD * ---------------- */ -/** Low level SVD */ -static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { - int info, m=a->nrows, n=a->ncols; - int minmn = (m < n) ? m : n; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, - (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U - (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT - m, n, - a->elements, m, // input matrix A (overwritten) - s, // singular values (min(m,n)) - (u ? u->elements : NULL), m, // U matrix (m×m) - (vt ? vt->elements : NULL), n // VT matrix (n×n) - ); -#else - int lwork = -1; - double work_query; - // Query optimal work size - dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, - (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, - &work_query, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); - - lwork = (int)work_query; - double work[lwork]; - dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, - (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, - work, &lwork, &info); -#endif - - return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); -} - /** Interface to SVD */ linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { if (u && ((a->nrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; @@ -1136,7 +1137,7 @@ linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx objectxmatrix *temp = xmatrix_clone(a); if (!temp) return LINALGERR_ALLOC; - linalgError_t err = _svd(temp, s, u, vt); + linalgError_t err = xmatrix_getinterface(a)->svdfn (temp, s, u, vt); object_free((object *) temp); return err; } @@ -1144,23 +1145,16 @@ linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx /** Processes singular values into a tuple */ static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) { value sv[n]; - for (int i = 0; i < n; i++) sv[i] = MORPHO_NIL; - for (int i = 0; i < n; i++) { - sv[i] = MORPHO_FLOAT(s[i]); - } + for (int i = 0; i < n; i++) sv[i] = MORPHO_FLOAT(s[i]); objecttuple *new = object_newtuple(n, sv); - if (!new) { - for (int i = 0; i < n; i++) morpho_freeobject(sv[i]); - return false; - } + if (!new) return false; *out = MORPHO_OBJECT(new); return true; } #define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } - /** Singular Value Decomposition */ value XMatrix_svd(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); @@ -1175,10 +1169,10 @@ value XMatrix_svd(vm *v, int nargs, value *args) { double singular_values[minmn]; // Allocate U (m×m) and VT (n×n) matrices - u = xmatrix_new(m, m, false); + u = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); _CHK_SVD(u); - vt = xmatrix_new(n, n, false); + vt = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), n, n, a->nvals, false); _CHK_SVD(vt); linalgError_t err = xmatrix_svd(a, singular_values, u, vt); @@ -1196,11 +1190,6 @@ value XMatrix_svd(vm *v, int nargs, value *args) { if (u) object_free((object *) u); if (vt) object_free((object *) vt); if (otuple) object_free((object *) otuple); - if (MORPHO_ISOBJECT(s)) { - value svx; - objecttuple *t = MORPHO_GETTUPLE(s); - for (int i = 0; i < tuple_length(t); i++) if (tuple_getelement(t, i, &svx)) morpho_freeobject(svx); - } morpho_freeobject(s); return MORPHO_NIL; diff --git a/src/xmatrix.h b/src/xmatrix.h index a4ef35c2..a3b40cf1 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -92,12 +92,20 @@ typedef double (*xmatrix_normfn_t) (objectxmatrix *a, xmatrix_norm_t nrm); typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *a, objectxmatrix *b, int *pivot); /** Function that finds the eigenvalues of a matrix - * @param[in|out] a - lhs; overwritten + * @param[in|out] a - matrix to diagonalize; overwritten * @param[out] w - eigenvalues; dimension N * @param[out] vec - right eigenvectors. Can be NULL if only eigenvalues requested * @returns a matrix error code */ typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec); +/** Function that finds the svd of a matrix + * @param[in|out] a - overwritten + * @param[out] s - singular values + * @param[out] u - left singular vectors + * @param[out] v - right singular vectors (transposed so columns contain singular vectors) + * @returns a matrix error code */ +typedef linalgError_t (*xmatrix_svdfn_t) (objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); + typedef struct { xmatrix_printelfn_t printelfn; xmatrix_printeltobufffn_t printeltobufffn; @@ -106,6 +114,7 @@ typedef struct { xmatrix_normfn_t normfn; xmatrix_solvefn_t solvefn; xmatrix_eigenfn_t eigenfn; + xmatrix_svdfn_t svdfn; } matrixinterfacedefn; void xmatrix_addinterface(matrixinterfacedefn *defn); diff --git a/test/methods/complexmatrix_svd.morpho b/test/methods/complexmatrix_svd.morpho new file mode 100644 index 00000000..68aa3368 --- /dev/null +++ b/test/methods/complexmatrix_svd.morpho @@ -0,0 +1,22 @@ +// Singular Value Decomposition +import newlinalg + +var A = ComplexMatrix(((1+1im,0+0im),(0+0im,2+2im))) + +var svd = A.svd() + +// Test reconstruction: U * S * V^T should approximately equal A +var U = svd[0] +var S = svd[1] +var V = svd[2] + +// Create diagonal matrix from singular values +var Sdiag = ComplexMatrix(2,2) +Sdiag[0,0] = S[0] +Sdiag[1,1] = S[1] + +var VT = V.transpose() +var reconstructed = U * Sdiag * VT + +print (reconstructed - A).norm() < 1e-10 +// expect: true From 4aa3521833be92b65c42b768f28a898994027da8 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 11:10:38 -0500 Subject: [PATCH 086/156] Fix test case --- test/methods/matrix_svd.morpho | 1 + 1 file changed, 1 insertion(+) diff --git a/test/methods/matrix_svd.morpho b/test/methods/matrix_svd.morpho index 4a4e20b1..037c7f41 100644 --- a/test/methods/matrix_svd.morpho +++ b/test/methods/matrix_svd.morpho @@ -15,6 +15,7 @@ print svd[1] // expect: (2, 1) print (svd[2] - XMatrix(((0,1),(1,0)))).norm() < 1e-10 +// expect: true // Test reconstruction: U * S * V^T should approximately equal A var U = svd[0] From 86db518eff5a41e14a4bb0a416aba232217cd4d4 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 11:19:55 -0500 Subject: [PATCH 087/156] Matrix types now inherit from Object --- src/xcomplexmatrix.c | 5 ++++- src/xmatrix.c | 5 ++++- 2 files changed, 8 insertions(+), 2 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index bdb63e00..dbeb1889 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -570,7 +570,10 @@ void complexmatrix_initialize(void) { objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); xmatrix_addinterface(&complexmatrixdefn); - value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), MORPHO_NIL); + objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); + value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); + + value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), objclass); object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/src/xmatrix.c b/src/xmatrix.c index 960869fb..ae7ab1c2 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -1349,7 +1349,10 @@ void xmatrix_initialize(void) { objectxmatrixtype=object_addtype(&objectxmatrixdefn); xmatrix_addinterface(&xmatrixdefn); - value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), MORPHO_NIL); + objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); + value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); + + value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), objclass); object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); From 8f3a7588054a3a20424b4416ec4fa2008c7601de Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 22:07:21 -0500 Subject: [PATCH 088/156] Missing constructor tests --- ...rray_constructor_invalid_dimensions.morpho | 12 +++++ ...omplexmatrix_constructor_edge_cases.morpho | 48 +++++++++++++++++++ ...plexmatrix_constructor_invalid_args.morpho | 6 +++ ...rray_constructor_invalid_dimensions.morpho | 12 +++++ .../matrix_constructor_edge_cases.morpho | 48 +++++++++++++++++++ .../matrix_identity_constructor.morpho | 13 +++++ 6 files changed, 139 insertions(+) create mode 100644 test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho create mode 100644 test/constructors/complexmatrix_constructor_edge_cases.morpho create mode 100644 test/constructors/complexmatrix_constructor_invalid_args.morpho create mode 100644 test/constructors/matrix_array_constructor_invalid_dimensions.morpho create mode 100644 test/constructors/matrix_constructor_edge_cases.morpho create mode 100644 test/constructors/matrix_identity_constructor.morpho diff --git a/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho b/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho new file mode 100644 index 00000000..f45fe032 --- /dev/null +++ b/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho @@ -0,0 +1,12 @@ +// ComplexMatrix constructor from Array with invalid dimensions +import newlinalg + +// Try to construct from a 1D array (should fail - requires 2D) +var a[4] +a[0] = 1 +a[1] = 2 +a[2] = 3 +a[3] = 4 + +print ComplexMatrix(a) +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/constructors/complexmatrix_constructor_edge_cases.morpho b/test/constructors/complexmatrix_constructor_edge_cases.morpho new file mode 100644 index 00000000..eae633aa --- /dev/null +++ b/test/constructors/complexmatrix_constructor_edge_cases.morpho @@ -0,0 +1,48 @@ +// ComplexMatrix constructor edge cases +import newlinalg + +// Zero dimension matrix (0x0) +var A = ComplexMatrix(0, 0) +print A.dimensions() +// expect: (0, 0) +print A.count() +// expect: 0 + +// Zero rows, non-zero columns +var B = ComplexMatrix(0, 3) +print B.dimensions() +// expect: (0, 3) +print B.count() +// expect: 0 + +// Non-zero rows, zero columns +var C = ComplexMatrix(3, 0) +print C.dimensions() +// expect: (3, 0) +print C.count() +// expect: 0 + +// Single element matrix (1x1) +var D = ComplexMatrix(1, 1) +D[0,0] = 42+10im +print D +// expect: [ 42 + 10im ] + +// Single row matrix (1xN) +var E = ComplexMatrix(1, 3) +E[0,0] = 1+im +E[0,1] = 2+2im +E[0,2] = 3+3im +print E +// expect: [ 1 + 1im 2 + 2im 3 + 3im ] + +// Single column matrix (Nx1) +var F = ComplexMatrix(3, 1) +F[0,0] = 1+im +F[1,0] = 2+2im +F[2,0] = 3+3im +print F +// expect: [ 1 + 1im ] +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] + diff --git a/test/constructors/complexmatrix_constructor_invalid_args.morpho b/test/constructors/complexmatrix_constructor_invalid_args.morpho new file mode 100644 index 00000000..e95d5e16 --- /dev/null +++ b/test/constructors/complexmatrix_constructor_invalid_args.morpho @@ -0,0 +1,6 @@ +// ComplexMatrix constructor with invalid arguments +import newlinalg + +// Try to construct with invalid argument types +print ComplexMatrix("invalid") +// expect error 'MltplDsptchFld' diff --git a/test/constructors/matrix_array_constructor_invalid_dimensions.morpho b/test/constructors/matrix_array_constructor_invalid_dimensions.morpho new file mode 100644 index 00000000..a2d5160f --- /dev/null +++ b/test/constructors/matrix_array_constructor_invalid_dimensions.morpho @@ -0,0 +1,12 @@ +// XMatrix constructor from Array with invalid dimensions +import newlinalg + +// Try to construct from a 1D array (should fail - requires 2D) +var a[4] +a[0] = 1 +a[1] = 2 +a[2] = 3 +a[3] = 4 + +print XMatrix(a) +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/constructors/matrix_constructor_edge_cases.morpho b/test/constructors/matrix_constructor_edge_cases.morpho new file mode 100644 index 00000000..509ec623 --- /dev/null +++ b/test/constructors/matrix_constructor_edge_cases.morpho @@ -0,0 +1,48 @@ +// XMatrix constructor edge cases +import newlinalg + +// Zero dimension matrix (0x0) +var A = XMatrix(0, 0) +print A.dimensions() +// expect: (0, 0) +print A.count() +// expect: 0 + +// Zero rows, non-zero columns +var B = XMatrix(0, 3) +print B.dimensions() +// expect: (0, 3) +print B.count() +// expect: 0 + +// Non-zero rows, zero columns +var C = XMatrix(3, 0) +print C.dimensions() +// expect: (3, 0) +print C.count() +// expect: 0 + +// Single element matrix (1x1) +var D = XMatrix(1, 1) +D[0,0] = 42 +print D +// expect: [ 42 ] + +// Single row matrix (1xN) +var E = XMatrix(1, 3) +E[0,0] = 1 +E[0,1] = 2 +E[0,2] = 3 +print E +// expect: [ 1 2 3 ] + +// Single column matrix (Nx1) +var F = XMatrix(3, 1) +F[0,0] = 1 +F[1,0] = 2 +F[2,0] = 3 +print F +// expect: [ 1 ] +// expect: [ 2 ] +// expect: [ 3 ] + diff --git a/test/constructors/matrix_identity_constructor.morpho b/test/constructors/matrix_identity_constructor.morpho new file mode 100644 index 00000000..761948bb --- /dev/null +++ b/test/constructors/matrix_identity_constructor.morpho @@ -0,0 +1,13 @@ +// IdentityXMatrix constructor +import newlinalg + +var I = IdentityXMatrix(3) + +print I +// expect: [ 1 0 0 ] +// expect: [ 0 1 0 ] +// expect: [ 0 0 1 ] + +var I2 = IdentityXMatrix(1) +print I2 +// expect: [ 1 ] From 7839307b2a431c9dc62d143fff21d11a71ed915e Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Wed, 7 Jan 2026 22:16:29 -0500 Subject: [PATCH 089/156] Minor bug fixes --- src/xcomplexmatrix.c | 2 +- src/xmatrix.c | 15 +++++++++------ 2 files changed, 10 insertions(+), 7 deletions(-) diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index dbeb1889..db27c8d4 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -51,7 +51,7 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { if (MORPHO_ISCOMPLEX(in)) { *((MorphoComplex *) el) = MORPHO_GETCOMPLEX(in)->Z; } else if (morpho_valuetofloat(in, el)) { - el[1] = 0.0; // Set real part to zero + el[1] = 0.0; // Set imaginary part to zero } else return LINALGERR_NON_NUMERICAL; return LINALGERR_OK; } diff --git a/src/xmatrix.c b/src/xmatrix.c index ae7ab1c2..95d971cb 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -131,14 +131,15 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { /** Low level eigensolver */ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { int info, n=a->nrows; + double wr[n], wi[n]; #ifdef MORPHO_LINALG_USE_LAPACKE info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); #else - int lwork=4*n; double work[4*n], wr[n], wi[n]; + int lwork=4*n; double work[4*n]; dgeev_("N", (vec ? "V" : "N"), &n, a->elements, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); - for (int i=0; i0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } @@ -269,7 +270,7 @@ objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, Matrix _getelement(lst, i, &iel); for (int j=0; jsetelfn(v, jel, new->elements+(j*ncols + i)*new->nvals); + xmatrix_getinterface(new)->setelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); } } } @@ -290,7 +291,7 @@ objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, unsigned int indx[2]={ i, j }; value el; if (array_getelement(a, 2, indx, &el)==ARRAY_OK) { - xmatrix_getinterface(new)->setelfn(v, el, new->elements+(j*ncols + i)*new->nvals); + xmatrix_getinterface(new)->setelfn(v, el, new->elements+(j*nrows + i)*new->nvals); } } } @@ -439,8 +440,10 @@ void xmatrix_sum(objectxmatrix *a, double *sum) { /** Calculate the trace of a matrix */ linalgError_t xmatrix_trace(objectxmatrix *a, double *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; - *out=1.0; - *out=cblas_ddot(a->nrows, a->elements, a->ncols+1, out, 0); + *out = 0.0; + for (int i = 0; i < a->nrows; i++) { + *out += a->elements[a->nvals * (i * a->nrows + i)]; + } return LINALGERR_OK; } From fe609dcbfaa441c0e8453141bd83924d08ed34d8 Mon Sep 17 00:00:00 2001 From: softmattertheory Date: Fri, 9 Jan 2026 00:14:28 -0500 Subject: [PATCH 090/156] QR decomposition --- src/xcomplexmatrix.c | 65 +++++++++++- src/xmatrix.c | 118 +++++++++++++++++++++- src/xmatrix.h | 12 +++ test/methods/complexmatrix_qr.morpho | 145 +++++++++++++++++++++++++++ test/methods/matrix_qr.morpho | 135 +++++++++++++++++++++++++ 5 files changed, 473 insertions(+), 2 deletions(-) create mode 100644 test/methods/complexmatrix_qr.morpho create mode 100644 test/methods/matrix_qr.morpho diff --git a/src/xcomplexmatrix.c b/src/xcomplexmatrix.c index db27c8d4..3a860f77 100644 --- a/src/xcomplexmatrix.c +++ b/src/xcomplexmatrix.c @@ -138,6 +138,67 @@ static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level QR decomposition */ +static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + __LAPACK_double_complex tau[minmn]; + + // Compute QR factorization without pivoting: A = Q*R +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zgeqrf(LAPACK_COL_MAJOR, m, n, (__LAPACK_double_complex *) a->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + int lwork = -1; + __LAPACK_double_complex work_query; + + // Query optimal work size for ZGEQRF, which is reused for ZUNGQR + zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + int lwork_geqrf = (int) creal(work_query); + __LAPACK_double_complex work[lwork_geqrf]; + lwork = lwork_geqrf; + + // Compute QR factorization without pivoting + zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // Extract R (upper triangle of a) into r + // Copy entire matrix first then zero out below the diagonal + xmatrix_copy(a, r); + __LAPACK_double_complex *relems = (__LAPACK_double_complex *) r->elements; + for (int j = 0; j < n && j < m - 1; j++) { + memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(__LAPACK_double_complex)); + } + + // Generate Q from reflectors + if (q) { + // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) + // ZGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns + __LAPACK_double_complex *aelems = (__LAPACK_double_complex *) a->elements; + __LAPACK_double_complex *qelems = (__LAPACK_double_complex *) q->elements; + for (int j = 0; j < n; j++) { + cblas_zcopy(m, &aelems[j * m], 1, &qelems[j * m], 1); + } + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zungqr(LAPACK_COL_MAJOR, m, minmn, minmn, (__LAPACK_double_complex *) q->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + lwork = lwork_geqrf; + zungqr_(&m, &minmn, &minmn, (__LAPACK_double_complex *) q->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // If Q should be m×m, zero out remaining columns if m > minmn + if (m > minmn) memset(&q->elements[minmn * m * q->nvals], 0, (m - minmn) * m * sizeof(__LAPACK_double_complex)); + } + + return LINALGERR_OK; +} + /* ---------------------- * Interface definition * ---------------------- */ @@ -150,7 +211,8 @@ matrixinterfacedefn complexmatrixdefn = { .normfn = _normfn, .solvefn = _solve, .eigenfn = _eigen, - .svdfn = _svd + .svdfn = _svd, + .qrfn = _qr }; /* ---------------------- @@ -554,6 +616,7 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", C MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_QR_METHOD, "Tuple ()", XMatrix_qr, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.c b/src/xmatrix.c index 95d971cb..b470ab7e 100644 --- a/src/xmatrix.c +++ b/src/xmatrix.c @@ -178,6 +178,63 @@ static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } +/** Low level QR decomposition without pivoting */ +static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + double tau[minmn]; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dgeqrf(LAPACK_COL_MAJOR, m, n, a->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + int lwork = -1; + double work_query; + + // Query optimal work size for DGEQRF, which is reused for DORGQR + dgeqrf_(&m, &n, a->elements, &m, tau, &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + int lwork_geqrf = (int) work_query; + double work[lwork_geqrf]; + lwork = lwork_geqrf; + + // Compute QR factorization without pivoting + dgeqrf_(&m, &n, a->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // Extract R (upper triangle of a) into r + // Copy entire matrix first, then zero out below the diagonal + xmatrix_copy(a, r); + // Only process columns where there are rows below the diagonal (j < m - 1) + for (int j = 0; j < n && j < m - 1; j++) { + memset(&r->elements[j * m + (j + 1)], 0, (m - j - 1) * sizeof(double)); + } + + // Generate Q from reflectors + if (q) { + // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) + // DGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns + for (int j = 0; j < n; j++) cblas_dcopy(m, &a->elements[j * m], 1, &q->elements[j * m], 1); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dorgqr(LAPACK_COL_MAJOR, m, minmn, minmn, q->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + lwork = lwork_geqrf; + dorgqr_(&m, &minmn, &minmn, q->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // If Q should be m×m, zero out remaining columns if m > minmn + // DORGQR only generates the first minmn columns, so we zero the rest + if (m > minmn) memset(&q->elements[minmn * m], 0, (m - minmn) * m * sizeof(double)); + } + + return LINALGERR_OK; +} + /* ---------------------- * Interface definition * ---------------------- */ @@ -190,7 +247,8 @@ matrixinterfacedefn xmatrixdefn = { .normfn = _normfn, .solvefn = _solve, .eigenfn = _eigen, - .svdfn = _svd + .svdfn = _svd, + .qrfn = _qr }; /* ---------------------- @@ -1145,6 +1203,23 @@ linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx return err; } +/* ---------------- + * QR decomposition + * ---------------- */ + +/** Interface to QR decomposition */ +linalgError_t xmatrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { + if (q && ((a->nrows != q->nrows) || (a->nrows != q->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + if (r && ((a->nrows != r->nrows) || (a->ncols != r->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + + objectxmatrix *temp = xmatrix_clone(a); + if (!temp) return LINALGERR_ALLOC; + + linalgError_t err = xmatrix_getinterface(a)->qrfn (temp, q, r); + object_free((object *) temp); + return err; +} + /** Processes singular values into a tuple */ static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) { value sv[n]; @@ -1199,6 +1274,46 @@ value XMatrix_svd(vm *v, int nargs, value *args) { } #undef _CHK_SVD +/* ---------------- + * QR decomposition + * ---------------- */ + +#define _CHK_QR(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _qr_cleanup; } +/** QR Decomposition */ +value XMatrix_qr(vm *v, int nargs, value *args) { + objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + + objectxmatrix *q = NULL; // Orthogonal matrix Q + objectxmatrix *r = NULL; // Upper triangular matrix R + objecttuple *otuple = NULL; // Tuple to return everything + + MatrixIdx_t m = a->nrows, n = a->ncols; + + // Allocate Q (m×m) and R (m×n) matrices + q = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); + _CHK_QR(q); + + r = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, n, a->nvals, false); + _CHK_QR(r); + + linalgError_t err = xmatrix_qr(a, q, r); + if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _qr_cleanup; } + + value outtuple[2] = { MORPHO_OBJECT(q), MORPHO_OBJECT(r) }; + otuple = object_newtuple(2, outtuple); + _CHK_QR(otuple); + + return morpho_wrapandbind(v, (object *) otuple); + +_qr_cleanup: + if (q) object_free((object *) q); + if (r) object_free((object *) r); + if (otuple) object_free((object *) otuple); + + return MORPHO_NIL; +} +#undef _CHK_QR + /* --------- * Products * --------- */ @@ -1336,6 +1451,7 @@ MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix (XMatrix)", XMatrix_outer MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(XMATRIX_QR_METHOD, "Tuple ()", XMatrix_qr, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), diff --git a/src/xmatrix.h b/src/xmatrix.h index a3b40cf1..dcac0931 100644 --- a/src/xmatrix.h +++ b/src/xmatrix.h @@ -106,6 +106,13 @@ typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, * @returns a matrix error code */ typedef linalgError_t (*xmatrix_svdfn_t) (objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); +/** Function that finds the QR decomposition of a matrix + * @param[in|out] a - overwritten with R in upper triangle and reflectors below + * @param[out] q - orthogonal matrix Q + * @param[out] r - upper triangular matrix R + * @returns a matrix error code */ +typedef linalgError_t (*xmatrix_qrfn_t) (objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); + typedef struct { xmatrix_printelfn_t printelfn; xmatrix_printeltobufffn_t printeltobufffn; @@ -115,6 +122,7 @@ typedef struct { xmatrix_solvefn_t solvefn; xmatrix_eigenfn_t eigenfn; xmatrix_svdfn_t svdfn; + xmatrix_qrfn_t qrfn; } matrixinterfacedefn; void xmatrix_addinterface(matrixinterfacedefn *defn); @@ -131,6 +139,7 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_EIGENVALUES_METHOD "eigenvalues" #define XMATRIX_EIGENSYSTEM_METHOD "eigensystem" #define XMATRIX_SVD_METHOD "svd" +#define XMATRIX_QR_METHOD "qr" #define XMATRIX_INNER_METHOD "inner" #define XMATRIX_INVERSE_METHOD "inverse" #define XMATRIX_NORM_METHOD "norm" @@ -182,6 +191,7 @@ IMPLEMENTATIONFN(XMatrix_transpose); IMPLEMENTATIONFN(XMatrix_eigenvalues); IMPLEMENTATIONFN(XMatrix_eigensystem); IMPLEMENTATIONFN(XMatrix_svd); +IMPLEMENTATIONFN(XMatrix_qr); IMPLEMENTATIONFN(XMatrix_reshape); IMPLEMENTATIONFN(XMatrix_roll__int); IMPLEMENTATIONFN(XMatrix_roll__int_int); @@ -215,6 +225,8 @@ linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b); linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); +linalgError_t xmatrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); + linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); diff --git a/test/methods/complexmatrix_qr.morpho b/test/methods/complexmatrix_qr.morpho new file mode 100644 index 00000000..08eae0f8 --- /dev/null +++ b/test/methods/complexmatrix_qr.morpho @@ -0,0 +1,145 @@ +// QR Decomposition for ComplexMatrix +import newlinalg + +// Test with a square complex matrix +var A = ComplexMatrix(((1.0+1.0im, 2.0+0.0im, 3.0-1.0im), + (4.0+2.0im, 5.0+1.0im, 6.0+0.0im), + (7.0+0.0im, 8.0-1.0im, 9.0+2.0im))) + +var qr = A.qr() + +print qr +// expect: (, ) + +var Q = qr[0] +var R = qr[1] + +print Q.dimensions() +// expect: (3, 3) + +print R.dimensions() +// expect: (3, 3) + +// Verify Q is unitary: Q^H * Q should be approximately I (conjugate transpose) +var QHQ = Q.conjTranspose() * Q +var I = ComplexMatrix(3,3) +for (var i = 0; i < 3; i = i + 1) { + I[i,i] = 1.0 + 0.0im +} + +print (QHQ - I).norm() < 1e-10 +// expect: true + +// Verify R is upper triangular (check lower triangle is zero) +var R_lower_norm = 0.0 +for (var i = 0; i < 3; i = i + 1) { + for (var j = 0; j < i; j = j + 1) { + var val = R[i,j] + R_lower_norm += val.abs() + } +} +print R_lower_norm < 1e-10 +// expect: true + +// Verify Q * R has the right structure +var QR = Q * R +print QR.dimensions() +// expect: (3, 3) + +// Test with a non-square matrix (tall matrix) +var B = ComplexMatrix(4,2) +B[0,0] = 1.0 + 1.0im +B[0,1] = 2.0 + 0.0im +B[1,0] = 3.0 - 1.0im +B[1,1] = 4.0 + 2.0im +B[2,0] = 5.0 + 0.0im +B[2,1] = 6.0 - 1.0im +B[3,0] = 7.0 + 1.0im +B[3,1] = 8.0 + 0.0im + +var qr2 = B.qr() +var Q2 = qr2[0] +var R2 = qr2[1] + +print Q2.dimensions() +// expect: (4, 4) + +print R2.dimensions() +// expect: (4, 2) + +// Verify Q2 first 2 columns are orthonormal (unitary) +// For tall matrices, only the first min(m,n) columns from ZUNGQR are orthonormal +// The remaining columns are zero +var Q2_col0 = Q2.column(0) +var Q2_col1 = Q2.column(1) +// Check norms +var norm0 = Q2_col0.norm() +var norm1 = Q2_col1.norm() + +print abs(norm0-1) < 1e-7 // expect: true +print abs(norm1-1) < 1e-7 // expect: true + +// Check orthogonality: inner product should be close to zero +var inner01 = Q2_col0.inner(Q2_col1) +var inner01_mag = inner01.abs() +print inner01_mag < 1e-10 +// expect: true + +// Verify R2 is upper triangular +var R2_lower_norm = 0.0 +for (var i = 0; i < 4; i = i + 1) { + for (var j = 0; j < 2; j = j + 1) { + if (i > j) { + var val = R2[i,j] + R2_lower_norm = val.abs() + } + } +} +print R2_lower_norm < 1e-10 +// expect: true + +// Test with a wide matrix +var C = ComplexMatrix(2,4) +C[0,0] = 1.0 + 1.0im +C[0,1] = 2.0 + 0.0im +C[0,2] = 3.0 - 1.0im +C[0,3] = 4.0 + 2.0im +C[1,0] = 5.0 + 0.0im +C[1,1] = 6.0 - 1.0im +C[1,2] = 7.0 + 1.0im +C[1,3] = 8.0 + 0.0im + +var qr3 = C.qr() +var Q3 = qr3[0] +var R3 = qr3[1] + +print Q3.dimensions() +// expect: (2, 2) + +print R3.dimensions() +// expect: (2, 4) + +// Verify Q3 is unitary +var Q3HQ3 = Q3.conjTranspose() * Q3 +var I2 = ComplexMatrix(2,2) +for (var i = 0; i < 2; i = i + 1) { + I2[i,i] = 1.0 + 0.0im +} +print (Q3HQ3 - I2).norm() < 1e-10 +// expect: true + +// Test with real-valued complex matrix (should work like real matrix) +var D = ComplexMatrix(((1.0+0.0im, 0.0+0.0im), + (0.0+0.0im, 2.0+0.0im))) +var qr4 = D.qr() +var Q4 = qr4[0] +var R4 = qr4[1] + +// Verify Q4 is unitary +var Q4HQ4 = Q4.conjTranspose() * Q4 +var I2b = ComplexMatrix(2,2) +for (var i = 0; i < 2; i = i + 1) { + I2b[i,i] = 1.0 + 0.0im +} +print (Q4HQ4 - I2b).norm() < 1e-10 +// expect: true diff --git a/test/methods/matrix_qr.morpho b/test/methods/matrix_qr.morpho new file mode 100644 index 00000000..79ac4847 --- /dev/null +++ b/test/methods/matrix_qr.morpho @@ -0,0 +1,135 @@ +// QR Decomposition +import newlinalg + +// Test with a square matrix (this one is singular, so R will have a zero on the diagonal) +var A = XMatrix(((1.0,2.0,3.0),(4.0,5.0,6.0),(7.0,8.0,9.0))) + +var qr = A.qr() + +print qr +// expect: (, ) + +var Q = qr[0] +var R = qr[1] + +print Q.dimensions() +// expect: (3, 3) + +print R.dimensions() +// expect: (3, 3) + +// Verify Q is orthogonal: Q^T * Q should be approximately I +var QTQ = Q.transpose() * Q +var I = IdentityXMatrix(3) + +print (QTQ - I).norm() < 1e-10 +// expect: true + +// Verify R is upper triangular (check lower triangle is zero) +var R_lower_norm = 0.0 +for (var i = 0; i < 3; i = i + 1) { + for (var j = 0; j < i; j = j + 1) { + R_lower_norm = R_lower_norm + R[i,j]*R[i,j] + } +} +print R_lower_norm < 1e-10 +// expect: true + +// Check R's diagonal - since A is singular, one diagonal element should be (close to) zero +// This indicates the matrix has rank 2 (not full rank) +print abs(R[2,2]) < 1e-8 +// expect: true + +// Verify Q * R reconstruction +var QR = Q * R +print (QR - A).norm() < 1e-10 +// expect: true + +// Test with a non-square matrix (tall matrix) +var B = XMatrix(4,2) +B[0,0] = 1.0 +B[0,1] = 2.0 +B[1,0] = 3.0 +B[1,1] = 4.0 +B[2,0] = 5.0 +B[2,1] = 6.0 +B[3,0] = 7.0 +B[3,1] = 8.0 + +var qr2 = B.qr() +var Q2 = qr2[0] +var R2 = qr2[1] + +print Q2.dimensions() +// expect: (4, 4) + +print R2.dimensions() +// expect: (4, 2) + +// Verify Q2 first 2 columns are orthonormal +// For tall matrices, only the first min(m,n) columns from DORGQR are orthonormal +// The remaining columns are zero +var Q2_col0 = Q2.column(0) +var Q2_col1 = Q2.column(1) +// Check norms +print Q2_col0.norm() < 1.0 + 1e-10 and Q2_col0.norm() > 1.0 - 1e-10 +// expect: true +print Q2_col1.norm() < 1.0 + 1e-10 and Q2_col1.norm() > 1.0 - 1e-10 +// expect: true +// Check orthogonality: dot product should be close to zero +var dot01 = Q2_col0.inner(Q2_col1) +print dot01 < 1e-10 and dot01 > -1e-10 +// expect: true + +// Verify R2 is upper triangular +var R2_lower_norm = 0.0 +for (var i = 0; i < 4; i = i + 1) { + for (var j = 0; j < 2; j = j + 1) { + if (i > j) { + R2_lower_norm = R2_lower_norm + R2[i,j]*R2[i,j] + } + } +} +print R2_lower_norm < 1e-10 +// expect: true + +// Test with a wide matrix +var C = XMatrix(2,4) +C[0,0] = 1.0 +C[0,1] = 2.0 +C[0,2] = 3.0 +C[0,3] = 4.0 +C[1,0] = 5.0 +C[1,1] = 6.0 +C[1,2] = 7.0 +C[1,3] = 8.0 + +var qr3 = C.qr() +var Q3 = qr3[0] +var R3 = qr3[1] + +print Q3.dimensions() +// expect: (2, 2) + +print R3.dimensions() +// expect: (2, 4) + +// Verify Q3 is orthogonal +var Q3TQ3 = Q3.transpose() * Q3 +var I2 = IdentityXMatrix(2) +print (Q3TQ3 - I2).norm() < 1e-10 +// expect: true + +// Test with identity matrix +var I3 = IdentityXMatrix(3) +var qr4 = I3.qr() +var Q4 = qr4[0] +var R4 = qr4[1] + +// Q should be close to identity +print (Q4 - I3).norm() < 1e-10 +// expect: true + +// R should be close to identity +print (R4 - I3).norm() < 1e-10 +// expect: true From 3bb2a01f36544fb3963ee6199cc7c39ea4875c9b Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 10:35:08 -0500 Subject: [PATCH 091/156] Move files into subfolder to facilitate merge --- CMakeLists.txt => newlinalg/CMakeLists.txt | 0 newlinalg/build/CMakeCache.txt | 404 +++ .../CMakeFiles/4.1.0/CMakeCCompiler.cmake | 84 + .../CMakeFiles/4.1.0/CMakeCXXCompiler.cmake | 104 + 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COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 10) + # define COMPILER_VERSION_PATCH DEC(__ARMCC_VERSION % 10000) +#endif + + +#elif defined(__clang__) && defined(__apple_build_version__) +# define COMPILER_ID "AppleClang" +# if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +# endif +# define COMPILER_VERSION_MAJOR DEC(__clang_major__) +# define COMPILER_VERSION_MINOR DEC(__clang_minor__) +# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__) +# if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +# endif +# define COMPILER_VERSION_TWEAK DEC(__apple_build_version__) + +#elif defined(__clang__) && defined(__ARMCOMPILER_VERSION) +# define COMPILER_ID "ARMClang" + # define COMPILER_VERSION_MAJOR DEC(__ARMCOMPILER_VERSION/1000000) + # define COMPILER_VERSION_MINOR DEC(__ARMCOMPILER_VERSION/10000 % 100) + # define COMPILER_VERSION_PATCH DEC(__ARMCOMPILER_VERSION/100 % 100) +# define COMPILER_VERSION_INTERNAL DEC(__ARMCOMPILER_VERSION) + +#elif defined(__clang__) && defined(__ti__) +# define COMPILER_ID "TIClang" + # define COMPILER_VERSION_MAJOR DEC(__ti_major__) + # define COMPILER_VERSION_MINOR DEC(__ti_minor__) + # define COMPILER_VERSION_PATCH DEC(__ti_patchlevel__) +# define COMPILER_VERSION_INTERNAL DEC(__ti_version__) + +#elif defined(__clang__) +# define COMPILER_ID "Clang" +# if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +# endif +# define COMPILER_VERSION_MAJOR DEC(__clang_major__) +# define COMPILER_VERSION_MINOR DEC(__clang_minor__) +# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__) +# if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +# endif + +#elif defined(__LCC__) && (defined(__GNUC__) || defined(__GNUG__) || defined(__MCST__)) +# define COMPILER_ID "LCC" +# define COMPILER_VERSION_MAJOR DEC(__LCC__ / 100) +# define COMPILER_VERSION_MINOR DEC(__LCC__ % 100) +# if defined(__LCC_MINOR__) +# define COMPILER_VERSION_PATCH DEC(__LCC_MINOR__) +# endif +# if defined(__GNUC__) && defined(__GNUC_MINOR__) +# define SIMULATE_ID "GNU" +# define SIMULATE_VERSION_MAJOR DEC(__GNUC__) +# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__) +# if defined(__GNUC_PATCHLEVEL__) +# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +# endif +# endif + +#elif defined(__GNUC__) +# define COMPILER_ID "GNU" +# define COMPILER_VERSION_MAJOR DEC(__GNUC__) +# if defined(__GNUC_MINOR__) +# define COMPILER_VERSION_MINOR DEC(__GNUC_MINOR__) +# endif +# if defined(__GNUC_PATCHLEVEL__) +# define COMPILER_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +# endif + +#elif defined(_MSC_VER) +# define COMPILER_ID "MSVC" + /* _MSC_VER = VVRR */ +# define COMPILER_VERSION_MAJOR DEC(_MSC_VER / 100) +# define COMPILER_VERSION_MINOR DEC(_MSC_VER % 100) +# if defined(_MSC_FULL_VER) +# if _MSC_VER >= 1400 + /* _MSC_FULL_VER = VVRRPPPPP */ +# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 100000) +# else + /* _MSC_FULL_VER = VVRRPPPP */ +# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 10000) +# endif +# endif +# if defined(_MSC_BUILD) +# define COMPILER_VERSION_TWEAK DEC(_MSC_BUILD) +# endif + +#elif defined(_ADI_COMPILER) +# define COMPILER_ID "ADSP" +#if defined(__VERSIONNUM__) + /* __VERSIONNUM__ = 0xVVRRPPTT */ +# define COMPILER_VERSION_MAJOR DEC(__VERSIONNUM__ >> 24 & 0xFF) +# define COMPILER_VERSION_MINOR DEC(__VERSIONNUM__ >> 16 & 0xFF) +# define COMPILER_VERSION_PATCH DEC(__VERSIONNUM__ >> 8 & 0xFF) +# define COMPILER_VERSION_TWEAK DEC(__VERSIONNUM__ & 0xFF) +#endif + +#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC) +# define COMPILER_ID "IAR" +# if defined(__VER__) && defined(__ICCARM__) +# define COMPILER_VERSION_MAJOR DEC((__VER__) / 1000000) +# define COMPILER_VERSION_MINOR DEC(((__VER__) / 1000) % 1000) +# define COMPILER_VERSION_PATCH DEC((__VER__) % 1000) +# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__) +# elif defined(__VER__) && (defined(__ICCAVR__) || defined(__ICCRX__) || defined(__ICCRH850__) || defined(__ICCRL78__) || defined(__ICC430__) || defined(__ICCRISCV__) || defined(__ICCV850__) || defined(__ICC8051__) || defined(__ICCSTM8__)) +# define COMPILER_VERSION_MAJOR DEC((__VER__) / 100) +# define COMPILER_VERSION_MINOR DEC((__VER__) - (((__VER__) / 100)*100)) +# define COMPILER_VERSION_PATCH DEC(__SUBVERSION__) +# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__) +# endif + +#elif defined(__DCC__) && defined(_DIAB_TOOL) +# define COMPILER_ID "Diab" + # define COMPILER_VERSION_MAJOR DEC(__VERSION_MAJOR_NUMBER__) + # define COMPILER_VERSION_MINOR DEC(__VERSION_MINOR_NUMBER__) + # define COMPILER_VERSION_PATCH DEC(__VERSION_ARCH_FEATURE_NUMBER__) + # define COMPILER_VERSION_TWEAK DEC(__VERSION_BUG_FIX_NUMBER__) + + +#elif defined(__SDCC_VERSION_MAJOR) || defined(SDCC) +# define COMPILER_ID "SDCC" +# if defined(__SDCC_VERSION_MAJOR) +# define COMPILER_VERSION_MAJOR DEC(__SDCC_VERSION_MAJOR) +# define COMPILER_VERSION_MINOR DEC(__SDCC_VERSION_MINOR) +# define COMPILER_VERSION_PATCH DEC(__SDCC_VERSION_PATCH) +# else + /* SDCC = VRP */ +# define COMPILER_VERSION_MAJOR DEC(SDCC/100) +# define COMPILER_VERSION_MINOR DEC(SDCC/10 % 10) +# define COMPILER_VERSION_PATCH DEC(SDCC % 10) +# endif + + +/* These compilers are either not known or too old to define an + identification macro. Try to identify the platform and guess that + it is the native compiler. */ +#elif defined(__hpux) || defined(__hpua) +# define COMPILER_ID "HP" + +#else /* unknown compiler */ +# define COMPILER_ID "" +#endif + +/* Construct the string literal in pieces to prevent the source from + getting matched. Store it in a pointer rather than an array + because some compilers will just produce instructions to fill the + array rather than assigning a pointer to a static array. */ +char const* info_compiler = "INFO" ":" "compiler[" COMPILER_ID "]"; +#ifdef SIMULATE_ID +char const* info_simulate = "INFO" ":" "simulate[" SIMULATE_ID "]"; +#endif + +#ifdef __QNXNTO__ +char const* qnxnto = "INFO" ":" "qnxnto[]"; +#endif + +#if defined(__CRAYXT_COMPUTE_LINUX_TARGET) +char const *info_cray = "INFO" ":" "compiler_wrapper[CrayPrgEnv]"; +#endif + +#define STRINGIFY_HELPER(X) #X +#define STRINGIFY(X) STRINGIFY_HELPER(X) + +/* Identify known platforms by name. */ +#if defined(__linux) || defined(__linux__) || defined(linux) +# define PLATFORM_ID "Linux" + +#elif defined(__MSYS__) +# define PLATFORM_ID "MSYS" + +#elif defined(__CYGWIN__) +# define PLATFORM_ID "Cygwin" + +#elif defined(__MINGW32__) +# define PLATFORM_ID "MinGW" + +#elif defined(__APPLE__) +# define PLATFORM_ID "Darwin" + +#elif defined(_WIN32) || defined(__WIN32__) || defined(WIN32) +# define PLATFORM_ID "Windows" + +#elif defined(__FreeBSD__) || defined(__FreeBSD) +# define PLATFORM_ID "FreeBSD" + +#elif defined(__NetBSD__) || defined(__NetBSD) +# define PLATFORM_ID "NetBSD" + +#elif defined(__OpenBSD__) || defined(__OPENBSD) +# define PLATFORM_ID "OpenBSD" + +#elif defined(__sun) || defined(sun) +# define PLATFORM_ID "SunOS" + +#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__) +# define PLATFORM_ID "AIX" + +#elif defined(__hpux) || defined(__hpux__) +# define PLATFORM_ID "HP-UX" + +#elif defined(__HAIKU__) +# define PLATFORM_ID "Haiku" + +#elif defined(__BeOS) || defined(__BEOS__) || defined(_BEOS) +# define PLATFORM_ID "BeOS" + +#elif defined(__QNX__) || defined(__QNXNTO__) +# define PLATFORM_ID "QNX" + +#elif defined(__tru64) || defined(_tru64) || defined(__TRU64__) +# define PLATFORM_ID "Tru64" + +#elif defined(__riscos) || defined(__riscos__) +# define PLATFORM_ID "RISCos" + +#elif defined(__sinix) || defined(__sinix__) || defined(__SINIX__) +# define PLATFORM_ID "SINIX" + +#elif defined(__UNIX_SV__) +# define PLATFORM_ID "UNIX_SV" + +#elif defined(__bsdos__) +# define PLATFORM_ID "BSDOS" + +#elif defined(_MPRAS) || defined(MPRAS) +# define PLATFORM_ID "MP-RAS" + +#elif defined(__osf) || defined(__osf__) +# define PLATFORM_ID "OSF1" + +#elif defined(_SCO_SV) || defined(SCO_SV) || defined(sco_sv) +# define PLATFORM_ID "SCO_SV" + +#elif defined(__ultrix) || defined(__ultrix__) || defined(_ULTRIX) +# define PLATFORM_ID "ULTRIX" + +#elif defined(__XENIX__) || defined(_XENIX) || defined(XENIX) +# define PLATFORM_ID "Xenix" + +#elif defined(__WATCOMC__) +# if defined(__LINUX__) +# define PLATFORM_ID "Linux" + +# elif defined(__DOS__) +# define PLATFORM_ID "DOS" + +# elif defined(__OS2__) +# define PLATFORM_ID "OS2" + +# elif defined(__WINDOWS__) +# define PLATFORM_ID "Windows3x" + +# elif defined(__VXWORKS__) +# define PLATFORM_ID "VxWorks" + +# else /* unknown platform */ +# define PLATFORM_ID +# endif + +#elif defined(__INTEGRITY) +# if defined(INT_178B) +# define PLATFORM_ID "Integrity178" + +# else /* regular Integrity */ +# define PLATFORM_ID "Integrity" +# endif + +# elif defined(_ADI_COMPILER) +# define PLATFORM_ID "ADSP" + +#else /* unknown platform */ +# define PLATFORM_ID + +#endif + +/* For windows compilers MSVC and Intel we can determine + the architecture of the compiler being used. This is because + the compilers do not have flags that can change the architecture, + but rather depend on which compiler is being used +*/ +#if defined(_WIN32) && defined(_MSC_VER) +# if defined(_M_IA64) +# define ARCHITECTURE_ID "IA64" + +# elif defined(_M_ARM64EC) +# define ARCHITECTURE_ID "ARM64EC" + +# elif defined(_M_X64) || defined(_M_AMD64) +# define ARCHITECTURE_ID "x64" + +# elif defined(_M_IX86) +# define ARCHITECTURE_ID "X86" + +# elif defined(_M_ARM64) +# define ARCHITECTURE_ID "ARM64" + +# elif defined(_M_ARM) +# if _M_ARM == 4 +# define ARCHITECTURE_ID "ARMV4I" +# elif _M_ARM == 5 +# define ARCHITECTURE_ID "ARMV5I" +# else +# define ARCHITECTURE_ID "ARMV" STRINGIFY(_M_ARM) +# endif + +# elif defined(_M_MIPS) +# define ARCHITECTURE_ID "MIPS" + +# elif defined(_M_SH) +# define ARCHITECTURE_ID "SHx" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__WATCOMC__) +# if defined(_M_I86) +# define ARCHITECTURE_ID "I86" + +# elif defined(_M_IX86) +# define ARCHITECTURE_ID "X86" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC) +# if defined(__ICCARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__ICCRX__) +# define ARCHITECTURE_ID "RX" + +# elif defined(__ICCRH850__) +# define ARCHITECTURE_ID "RH850" + +# elif defined(__ICCRL78__) +# define ARCHITECTURE_ID "RL78" + +# elif defined(__ICCRISCV__) +# define ARCHITECTURE_ID "RISCV" + +# elif defined(__ICCAVR__) +# define ARCHITECTURE_ID "AVR" + +# elif defined(__ICC430__) +# define ARCHITECTURE_ID "MSP430" + +# elif defined(__ICCV850__) +# define ARCHITECTURE_ID "V850" + +# elif defined(__ICC8051__) +# define ARCHITECTURE_ID "8051" + +# elif defined(__ICCSTM8__) +# define ARCHITECTURE_ID "STM8" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__ghs__) +# if defined(__PPC64__) +# define ARCHITECTURE_ID "PPC64" + +# elif defined(__ppc__) +# define ARCHITECTURE_ID "PPC" + +# elif defined(__ARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__x86_64__) +# define ARCHITECTURE_ID "x64" + +# elif defined(__i386__) +# define ARCHITECTURE_ID "X86" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__clang__) && defined(__ti__) +# if defined(__ARM_ARCH) +# define ARCHITECTURE_ID "ARM" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__TI_COMPILER_VERSION__) +# if defined(__TI_ARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__MSP430__) +# define ARCHITECTURE_ID "MSP430" + +# elif defined(__TMS320C28XX__) +# define ARCHITECTURE_ID "TMS320C28x" + +# elif defined(__TMS320C6X__) || defined(_TMS320C6X) +# define ARCHITECTURE_ID "TMS320C6x" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +# elif defined(__ADSPSHARC__) +# define ARCHITECTURE_ID "SHARC" + +# elif defined(__ADSPBLACKFIN__) +# define ARCHITECTURE_ID "Blackfin" + +#elif defined(__TASKING__) + +# if defined(__CTC__) || defined(__CPTC__) +# define ARCHITECTURE_ID "TriCore" + +# elif defined(__CMCS__) +# define ARCHITECTURE_ID "MCS" + +# elif defined(__CARM__) || defined(__CPARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__CARC__) +# define ARCHITECTURE_ID "ARC" + +# elif defined(__C51__) +# define ARCHITECTURE_ID "8051" + +# elif defined(__CPCP__) +# define ARCHITECTURE_ID "PCP" + +# else +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__RENESAS__) +# if defined(__CCRX__) +# define ARCHITECTURE_ID "RX" + +# elif defined(__CCRL__) +# define ARCHITECTURE_ID "RL78" + +# elif defined(__CCRH__) +# define ARCHITECTURE_ID "RH850" + +# else +# define ARCHITECTURE_ID "" +# endif + +#else +# define ARCHITECTURE_ID +#endif + +/* Convert integer to decimal digit literals. */ +#define DEC(n) \ + ('0' + (((n) / 10000000)%10)), \ + ('0' + (((n) / 1000000)%10)), \ + ('0' + (((n) / 100000)%10)), \ + ('0' + (((n) / 10000)%10)), \ + ('0' + (((n) / 1000)%10)), \ + ('0' + (((n) / 100)%10)), \ + ('0' + (((n) / 10)%10)), \ + ('0' + ((n) % 10)) + +/* Convert integer to hex digit literals. */ +#define HEX(n) \ + ('0' + ((n)>>28 & 0xF)), \ + ('0' + ((n)>>24 & 0xF)), \ + ('0' + ((n)>>20 & 0xF)), \ + ('0' + ((n)>>16 & 0xF)), \ + ('0' + ((n)>>12 & 0xF)), \ + ('0' + ((n)>>8 & 0xF)), \ + ('0' + ((n)>>4 & 0xF)), \ + ('0' + ((n) & 0xF)) + +/* Construct a string literal encoding the version number. */ +#ifdef COMPILER_VERSION +char const* info_version = "INFO" ":" "compiler_version[" COMPILER_VERSION "]"; + +/* Construct a string literal encoding the version number components. */ +#elif defined(COMPILER_VERSION_MAJOR) +char const info_version[] = { + 'I', 'N', 'F', 'O', ':', + 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','[', + COMPILER_VERSION_MAJOR, +# ifdef COMPILER_VERSION_MINOR + '.', COMPILER_VERSION_MINOR, +# ifdef COMPILER_VERSION_PATCH + '.', COMPILER_VERSION_PATCH, +# ifdef COMPILER_VERSION_TWEAK + '.', COMPILER_VERSION_TWEAK, +# endif +# endif +# endif + ']','\0'}; +#endif + +/* Construct a string literal encoding the internal version number. */ +#ifdef COMPILER_VERSION_INTERNAL +char const info_version_internal[] = { + 'I', 'N', 'F', 'O', ':', + 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','_', + 'i','n','t','e','r','n','a','l','[', + COMPILER_VERSION_INTERNAL,']','\0'}; +#elif defined(COMPILER_VERSION_INTERNAL_STR) +char const* info_version_internal = "INFO" ":" "compiler_version_internal[" COMPILER_VERSION_INTERNAL_STR "]"; +#endif + +/* Construct a string literal encoding the version number components. */ +#ifdef SIMULATE_VERSION_MAJOR +char const info_simulate_version[] = { + 'I', 'N', 'F', 'O', ':', + 's','i','m','u','l','a','t','e','_','v','e','r','s','i','o','n','[', + SIMULATE_VERSION_MAJOR, +# ifdef SIMULATE_VERSION_MINOR + '.', SIMULATE_VERSION_MINOR, +# ifdef SIMULATE_VERSION_PATCH + '.', SIMULATE_VERSION_PATCH, +# ifdef SIMULATE_VERSION_TWEAK + '.', SIMULATE_VERSION_TWEAK, +# endif +# endif +# endif + ']','\0'}; +#endif + +/* Construct the string literal in pieces to prevent the source from + getting matched. Store it in a pointer rather than an array + because some compilers will just produce instructions to fill the + array rather than assigning a pointer to a static array. */ +char const* info_platform = "INFO" ":" "platform[" PLATFORM_ID "]"; +char const* info_arch = "INFO" ":" "arch[" ARCHITECTURE_ID "]"; + + + +#define C_STD_99 199901L +#define C_STD_11 201112L +#define C_STD_17 201710L +#define C_STD_23 202311L + +#ifdef __STDC_VERSION__ +# define C_STD __STDC_VERSION__ +#endif + +#if !defined(__STDC__) && !defined(__clang__) && !defined(__RENESAS__) +# if defined(_MSC_VER) || defined(__ibmxl__) || defined(__IBMC__) +# define C_VERSION "90" +# else +# define C_VERSION +# endif +#elif C_STD > C_STD_17 +# define C_VERSION "23" +#elif C_STD > C_STD_11 +# define C_VERSION "17" +#elif C_STD > C_STD_99 +# define C_VERSION "11" +#elif C_STD >= C_STD_99 +# define C_VERSION "99" +#else +# define C_VERSION "90" +#endif +const char* info_language_standard_default = + "INFO" ":" "standard_default[" C_VERSION "]"; + +const char* info_language_extensions_default = "INFO" ":" "extensions_default[" +#if (defined(__clang__) || defined(__GNUC__) || defined(__xlC__) || \ + defined(__TI_COMPILER_VERSION__) || defined(__RENESAS__)) && \ + !defined(__STRICT_ANSI__) + "ON" +#else + "OFF" +#endif +"]"; + +/*--------------------------------------------------------------------------*/ + +#ifdef ID_VOID_MAIN +void main() {} +#else +# if defined(__CLASSIC_C__) +int main(argc, argv) int argc; char *argv[]; +# else +int main(int argc, char* argv[]) +# endif +{ + int require = 0; + require += info_compiler[argc]; + require += info_platform[argc]; + require += info_arch[argc]; +#ifdef COMPILER_VERSION_MAJOR + require += info_version[argc]; +#endif +#if defined(COMPILER_VERSION_INTERNAL) || defined(COMPILER_VERSION_INTERNAL_STR) + require += info_version_internal[argc]; +#endif +#ifdef SIMULATE_ID + require += info_simulate[argc]; +#endif +#ifdef SIMULATE_VERSION_MAJOR + require += info_simulate_version[argc]; +#endif +#if defined(__CRAYXT_COMPUTE_LINUX_TARGET) + require += info_cray[argc]; +#endif + require += info_language_standard_default[argc]; + require += info_language_extensions_default[argc]; + (void)argv; + return require; +} +#endif diff --git a/newlinalg/build/CMakeFiles/4.1.0/CompilerIdC/a.out b/newlinalg/build/CMakeFiles/4.1.0/CompilerIdC/a.out new file mode 100755 index 0000000000000000000000000000000000000000..a27d804924265c7ec7ca192bab4f890795f56aaa GIT binary patch literal 33736 zcmeI5Uuau(6vt1})F!qynU=Xx?c&39%1F~z>`=sXw%e*(Te>|&>-_DuxoxxMpGm5l z%r2V@>QvSWLhaMuhPu7XDJ?iCD$)l*`l3!y>R(ovAR^2Sv7U49FKL>_DQ=J71LywE z`JLbI+;czom%JtC^J~BSRYT+;7ANZ(R=~irgIFe91&+xxmtVQ##)xI*It#6QxEHFGLd& z6-^8#d0}b3uXMh!P9lD3O~v`;Jxp48+S~TD6-7e&5b$V8$ymXYqSm|OQK^WLHQ3Oi zRQY_H@(V)t{=8c{E}yfVon23Mw0GvuNUo$V_C@BT7#67~Uz7L`66JhicRHayj$V{#$38dCt%3U?uYM;rCj$^|+NMT@UcA^?X*Gi23Fu&ptlq#Ul6J z!YVQQJZ!g4N}(36XZN8@){F9r>xaE>JG~;%7sxReZmDh=R%Eu%Z z*E{ZxuAL~Gv$p&`tClt8V+&jt*FP~^p}y$s+SdK>Kr)_+#>{kITPhVZACDP{p}k~9 zQZXYtm`um}+Kn`ST=lGx9vJS^b|z~iB1Sr*BIckm63g~Awdx3epP7kFl)p9#vFD8QU(k}K)_`pUgUd!!tIRdE?3I@xujVfOR*FYC3vyOMJc{PO&%`bkId3(b z#ivgq`Smd>UIZHiKmY_l00ck)1V8`;KmY_l00ck)1V8`;KmY_l00ck)1V8`;KmY_l z00ck)1V8`;KmY_l00ck)1V8`;KmY_l00ck)1V8`;KmY_l00ck)1VG@X6R>~(>7%XI z@6de|)?-AEqta-A#cjofYD1zO+*|ZE(>Tudbje?$TZh?r^eL=%HaMd7#+P0(1rc3CYVWqTdc>D=bAR($?11YgMZ z@6o@~&xZ8o7T-^*OwG!w*&<+@1q`-Z zU{Qu^$%<8!?RWv9?dCZuixSs$?c17JuJ8>urA(1Jo?~2&QF3zeP7B?$JRi2AL>{7J zLBEsRiT^j5)5{!2AUTqysvdXew)f6?Kk!`q==`W*GzH%EK69Yz=Od?#U!QBZFn#vO znRDUfr;CHLt}o~34>-HSl}m@uAAa%p*B4&h@yh1YHyZ!V*|5;~{_XB3HlGN*6R+EO zcH;N`KU#V(Uhb%S=)RUedv7%VzwLkX diff --git a/newlinalg/build/CMakeFiles/4.1.0/CompilerIdCXX/CMakeCXXCompilerId.cpp b/newlinalg/build/CMakeFiles/4.1.0/CompilerIdCXX/CMakeCXXCompilerId.cpp new file mode 100644 index 00000000..b35f567c --- /dev/null +++ b/newlinalg/build/CMakeFiles/4.1.0/CompilerIdCXX/CMakeCXXCompilerId.cpp @@ -0,0 +1,949 @@ +/* This source file must have a .cpp extension so that all C++ compilers + recognize the extension without flags. Borland does not know .cxx for + example. */ +#ifndef __cplusplus +# error "A C compiler has been selected for C++." +#endif + +#if !defined(__has_include) +/* If the compiler does not have __has_include, pretend the answer is + always no. */ +# define __has_include(x) 0 +#endif + + +/* Version number components: V=Version, R=Revision, P=Patch + Version date components: YYYY=Year, MM=Month, DD=Day */ + +#if defined(__INTEL_COMPILER) || defined(__ICC) +# define COMPILER_ID "Intel" +# if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +# endif +# if defined(__GNUC__) +# define SIMULATE_ID "GNU" +# endif + /* __INTEL_COMPILER = VRP prior to 2021, and then VVVV for 2021 and later, + except that a few beta releases use the old format with V=2021. */ +# if __INTEL_COMPILER < 2021 || __INTEL_COMPILER == 202110 || __INTEL_COMPILER == 202111 +# define COMPILER_VERSION_MAJOR DEC(__INTEL_COMPILER/100) +# define COMPILER_VERSION_MINOR DEC(__INTEL_COMPILER/10 % 10) +# if defined(__INTEL_COMPILER_UPDATE) +# define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER_UPDATE) +# else +# define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER % 10) +# endif +# else +# define COMPILER_VERSION_MAJOR DEC(__INTEL_COMPILER) +# define COMPILER_VERSION_MINOR DEC(__INTEL_COMPILER_UPDATE) + /* The third version component from --version is an update index, + but no macro is provided for it. */ +# define COMPILER_VERSION_PATCH DEC(0) +# endif +# if defined(__INTEL_COMPILER_BUILD_DATE) + /* __INTEL_COMPILER_BUILD_DATE = YYYYMMDD */ +# define COMPILER_VERSION_TWEAK DEC(__INTEL_COMPILER_BUILD_DATE) +# endif +# if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +# endif +# if defined(__GNUC__) +# define SIMULATE_VERSION_MAJOR DEC(__GNUC__) +# elif defined(__GNUG__) +# define SIMULATE_VERSION_MAJOR DEC(__GNUG__) +# endif +# if defined(__GNUC_MINOR__) +# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__) +# endif +# if defined(__GNUC_PATCHLEVEL__) +# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +# endif + +#elif (defined(__clang__) && defined(__INTEL_CLANG_COMPILER)) || defined(__INTEL_LLVM_COMPILER) +# define COMPILER_ID "IntelLLVM" +#if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +#endif +#if defined(__GNUC__) +# define SIMULATE_ID "GNU" +#endif +/* __INTEL_LLVM_COMPILER = VVVVRP prior to 2021.2.0, VVVVRRPP for 2021.2.0 and + * later. Look for 6 digit vs. 8 digit version number to decide encoding. + * VVVV is no smaller than the current year when a version is released. + */ +#if __INTEL_LLVM_COMPILER < 1000000L +# define COMPILER_VERSION_MAJOR DEC(__INTEL_LLVM_COMPILER/100) +# define COMPILER_VERSION_MINOR DEC(__INTEL_LLVM_COMPILER/10 % 10) +# define COMPILER_VERSION_PATCH DEC(__INTEL_LLVM_COMPILER % 10) +#else +# define COMPILER_VERSION_MAJOR DEC(__INTEL_LLVM_COMPILER/10000) +# define COMPILER_VERSION_MINOR DEC(__INTEL_LLVM_COMPILER/100 % 100) +# define COMPILER_VERSION_PATCH DEC(__INTEL_LLVM_COMPILER % 100) +#endif +#if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +#endif +#if defined(__GNUC__) +# define SIMULATE_VERSION_MAJOR DEC(__GNUC__) +#elif defined(__GNUG__) +# define SIMULATE_VERSION_MAJOR DEC(__GNUG__) +#endif +#if defined(__GNUC_MINOR__) +# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__) +#endif +#if defined(__GNUC_PATCHLEVEL__) +# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +#endif + +#elif defined(__PATHCC__) +# define COMPILER_ID "PathScale" +# define COMPILER_VERSION_MAJOR DEC(__PATHCC__) +# define COMPILER_VERSION_MINOR DEC(__PATHCC_MINOR__) +# if defined(__PATHCC_PATCHLEVEL__) +# define COMPILER_VERSION_PATCH DEC(__PATHCC_PATCHLEVEL__) +# endif + +#elif defined(__BORLANDC__) && defined(__CODEGEARC_VERSION__) +# define COMPILER_ID "Embarcadero" +# define COMPILER_VERSION_MAJOR HEX(__CODEGEARC_VERSION__>>24 & 0x00FF) +# define COMPILER_VERSION_MINOR HEX(__CODEGEARC_VERSION__>>16 & 0x00FF) +# define COMPILER_VERSION_PATCH DEC(__CODEGEARC_VERSION__ & 0xFFFF) + +#elif defined(__BORLANDC__) +# define COMPILER_ID "Borland" + /* __BORLANDC__ = 0xVRR */ +# define COMPILER_VERSION_MAJOR HEX(__BORLANDC__>>8) +# define COMPILER_VERSION_MINOR HEX(__BORLANDC__ & 0xFF) + +#elif defined(__WATCOMC__) && __WATCOMC__ < 1200 +# define COMPILER_ID "Watcom" + /* __WATCOMC__ = VVRR */ +# define COMPILER_VERSION_MAJOR DEC(__WATCOMC__ / 100) +# define COMPILER_VERSION_MINOR DEC((__WATCOMC__ / 10) % 10) +# if (__WATCOMC__ % 10) > 0 +# define COMPILER_VERSION_PATCH DEC(__WATCOMC__ % 10) +# endif + +#elif defined(__WATCOMC__) +# define COMPILER_ID "OpenWatcom" + /* __WATCOMC__ = VVRP + 1100 */ +# define COMPILER_VERSION_MAJOR DEC((__WATCOMC__ - 1100) / 100) +# define COMPILER_VERSION_MINOR DEC((__WATCOMC__ / 10) % 10) +# if (__WATCOMC__ % 10) > 0 +# define COMPILER_VERSION_PATCH DEC(__WATCOMC__ % 10) +# endif + +#elif defined(__SUNPRO_CC) +# define COMPILER_ID "SunPro" +# if __SUNPRO_CC >= 0x5100 + /* __SUNPRO_CC = 0xVRRP */ +# define COMPILER_VERSION_MAJOR HEX(__SUNPRO_CC>>12) +# define COMPILER_VERSION_MINOR HEX(__SUNPRO_CC>>4 & 0xFF) +# define COMPILER_VERSION_PATCH HEX(__SUNPRO_CC & 0xF) +# else + /* __SUNPRO_CC = 0xVRP */ +# define COMPILER_VERSION_MAJOR HEX(__SUNPRO_CC>>8) +# define COMPILER_VERSION_MINOR HEX(__SUNPRO_CC>>4 & 0xF) +# define COMPILER_VERSION_PATCH HEX(__SUNPRO_CC & 0xF) +# endif + +#elif defined(__HP_aCC) +# define COMPILER_ID "HP" + /* __HP_aCC = VVRRPP */ +# define COMPILER_VERSION_MAJOR DEC(__HP_aCC/10000) +# define COMPILER_VERSION_MINOR DEC(__HP_aCC/100 % 100) +# define COMPILER_VERSION_PATCH DEC(__HP_aCC % 100) + +#elif defined(__DECCXX) +# define COMPILER_ID "Compaq" + /* __DECCXX_VER = VVRRTPPPP */ +# define COMPILER_VERSION_MAJOR DEC(__DECCXX_VER/10000000) +# define COMPILER_VERSION_MINOR DEC(__DECCXX_VER/100000 % 100) +# define COMPILER_VERSION_PATCH DEC(__DECCXX_VER % 10000) + +#elif defined(__IBMCPP__) && defined(__COMPILER_VER__) +# define COMPILER_ID "zOS" + /* __IBMCPP__ = VRP */ +# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100) +# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10) +# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10) + +#elif defined(__open_xl__) && defined(__clang__) +# define COMPILER_ID "IBMClang" +# define COMPILER_VERSION_MAJOR DEC(__open_xl_version__) +# define COMPILER_VERSION_MINOR DEC(__open_xl_release__) +# define COMPILER_VERSION_PATCH DEC(__open_xl_modification__) +# define COMPILER_VERSION_TWEAK DEC(__open_xl_ptf_fix_level__) +# define COMPILER_VERSION_INTERNAL_STR __clang_version__ + + +#elif defined(__ibmxl__) && defined(__clang__) +# define COMPILER_ID "XLClang" +# define COMPILER_VERSION_MAJOR DEC(__ibmxl_version__) +# define COMPILER_VERSION_MINOR DEC(__ibmxl_release__) +# define COMPILER_VERSION_PATCH DEC(__ibmxl_modification__) +# define COMPILER_VERSION_TWEAK DEC(__ibmxl_ptf_fix_level__) + + +#elif defined(__IBMCPP__) && !defined(__COMPILER_VER__) && __IBMCPP__ >= 800 +# define COMPILER_ID "XL" + /* __IBMCPP__ = VRP */ +# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100) +# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10) +# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10) + +#elif defined(__IBMCPP__) && !defined(__COMPILER_VER__) && __IBMCPP__ < 800 +# define COMPILER_ID "VisualAge" + /* __IBMCPP__ = VRP */ +# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100) +# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10) +# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10) + +#elif defined(__NVCOMPILER) +# define COMPILER_ID "NVHPC" +# define COMPILER_VERSION_MAJOR DEC(__NVCOMPILER_MAJOR__) +# define COMPILER_VERSION_MINOR DEC(__NVCOMPILER_MINOR__) +# if defined(__NVCOMPILER_PATCHLEVEL__) +# define COMPILER_VERSION_PATCH DEC(__NVCOMPILER_PATCHLEVEL__) +# endif + +#elif defined(__PGI) +# define COMPILER_ID "PGI" +# define COMPILER_VERSION_MAJOR DEC(__PGIC__) +# define COMPILER_VERSION_MINOR DEC(__PGIC_MINOR__) +# if defined(__PGIC_PATCHLEVEL__) +# define COMPILER_VERSION_PATCH DEC(__PGIC_PATCHLEVEL__) +# endif + +#elif defined(__clang__) && defined(__cray__) +# define COMPILER_ID "CrayClang" +# define COMPILER_VERSION_MAJOR DEC(__cray_major__) +# define COMPILER_VERSION_MINOR DEC(__cray_minor__) +# define COMPILER_VERSION_PATCH DEC(__cray_patchlevel__) +# define COMPILER_VERSION_INTERNAL_STR __clang_version__ + + +#elif defined(_CRAYC) +# define COMPILER_ID "Cray" +# define COMPILER_VERSION_MAJOR DEC(_RELEASE_MAJOR) +# define COMPILER_VERSION_MINOR DEC(_RELEASE_MINOR) + +#elif defined(__TI_COMPILER_VERSION__) +# define COMPILER_ID "TI" + /* __TI_COMPILER_VERSION__ = VVVRRRPPP */ +# define COMPILER_VERSION_MAJOR DEC(__TI_COMPILER_VERSION__/1000000) +# define COMPILER_VERSION_MINOR DEC(__TI_COMPILER_VERSION__/1000 % 1000) +# define COMPILER_VERSION_PATCH DEC(__TI_COMPILER_VERSION__ % 1000) + +#elif defined(__CLANG_FUJITSU) +# define COMPILER_ID "FujitsuClang" +# define COMPILER_VERSION_MAJOR DEC(__FCC_major__) +# define COMPILER_VERSION_MINOR DEC(__FCC_minor__) +# define COMPILER_VERSION_PATCH DEC(__FCC_patchlevel__) +# define COMPILER_VERSION_INTERNAL_STR __clang_version__ + + +#elif defined(__FUJITSU) +# define COMPILER_ID "Fujitsu" +# if defined(__FCC_version__) +# define COMPILER_VERSION __FCC_version__ +# elif defined(__FCC_major__) +# define COMPILER_VERSION_MAJOR DEC(__FCC_major__) +# define COMPILER_VERSION_MINOR DEC(__FCC_minor__) +# define COMPILER_VERSION_PATCH DEC(__FCC_patchlevel__) +# endif +# if defined(__fcc_version) +# define COMPILER_VERSION_INTERNAL DEC(__fcc_version) +# elif defined(__FCC_VERSION) +# define COMPILER_VERSION_INTERNAL DEC(__FCC_VERSION) +# endif + + +#elif defined(__ghs__) +# define COMPILER_ID "GHS" +/* __GHS_VERSION_NUMBER = VVVVRP */ +# ifdef __GHS_VERSION_NUMBER +# define COMPILER_VERSION_MAJOR DEC(__GHS_VERSION_NUMBER / 100) +# define COMPILER_VERSION_MINOR DEC(__GHS_VERSION_NUMBER / 10 % 10) +# define COMPILER_VERSION_PATCH DEC(__GHS_VERSION_NUMBER % 10) +# endif + +#elif defined(__TASKING__) +# define COMPILER_ID "Tasking" + # define COMPILER_VERSION_MAJOR DEC(__VERSION__/1000) + # define COMPILER_VERSION_MINOR DEC(__VERSION__ % 100) +# define COMPILER_VERSION_INTERNAL DEC(__VERSION__) + +#elif defined(__ORANGEC__) +# define COMPILER_ID "OrangeC" +# define COMPILER_VERSION_MAJOR DEC(__ORANGEC_MAJOR__) +# define COMPILER_VERSION_MINOR DEC(__ORANGEC_MINOR__) +# define COMPILER_VERSION_PATCH DEC(__ORANGEC_PATCHLEVEL__) + +#elif defined(__RENESAS__) +# define COMPILER_ID "Renesas" +/* __RENESAS_VERSION__ = 0xVVRRPP00 */ +# define COMPILER_VERSION_MAJOR HEX(__RENESAS_VERSION__ >> 24 & 0xFF) +# define COMPILER_VERSION_MINOR HEX(__RENESAS_VERSION__ >> 16 & 0xFF) +# define COMPILER_VERSION_PATCH HEX(__RENESAS_VERSION__ >> 8 & 0xFF) + +#elif defined(__SCO_VERSION__) +# define COMPILER_ID "SCO" + +#elif defined(__ARMCC_VERSION) && !defined(__clang__) +# define COMPILER_ID "ARMCC" +#if __ARMCC_VERSION >= 1000000 + /* __ARMCC_VERSION = VRRPPPP */ + # define COMPILER_VERSION_MAJOR DEC(__ARMCC_VERSION/1000000) + # define COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 100) + # define COMPILER_VERSION_PATCH DEC(__ARMCC_VERSION % 10000) +#else + /* __ARMCC_VERSION = VRPPPP */ + # define COMPILER_VERSION_MAJOR DEC(__ARMCC_VERSION/100000) + # define COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 10) + # define COMPILER_VERSION_PATCH DEC(__ARMCC_VERSION % 10000) +#endif + + +#elif defined(__clang__) && defined(__apple_build_version__) +# define COMPILER_ID "AppleClang" +# if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +# endif +# define COMPILER_VERSION_MAJOR DEC(__clang_major__) +# define COMPILER_VERSION_MINOR DEC(__clang_minor__) +# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__) +# if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +# endif +# define COMPILER_VERSION_TWEAK DEC(__apple_build_version__) + +#elif defined(__clang__) && defined(__ARMCOMPILER_VERSION) +# define COMPILER_ID "ARMClang" + # define COMPILER_VERSION_MAJOR DEC(__ARMCOMPILER_VERSION/1000000) + # define COMPILER_VERSION_MINOR DEC(__ARMCOMPILER_VERSION/10000 % 100) + # define COMPILER_VERSION_PATCH DEC(__ARMCOMPILER_VERSION/100 % 100) +# define COMPILER_VERSION_INTERNAL DEC(__ARMCOMPILER_VERSION) + +#elif defined(__clang__) && defined(__ti__) +# define COMPILER_ID "TIClang" + # define COMPILER_VERSION_MAJOR DEC(__ti_major__) + # define COMPILER_VERSION_MINOR DEC(__ti_minor__) + # define COMPILER_VERSION_PATCH DEC(__ti_patchlevel__) +# define COMPILER_VERSION_INTERNAL DEC(__ti_version__) + +#elif defined(__clang__) +# define COMPILER_ID "Clang" +# if defined(_MSC_VER) +# define SIMULATE_ID "MSVC" +# endif +# define COMPILER_VERSION_MAJOR DEC(__clang_major__) +# define COMPILER_VERSION_MINOR DEC(__clang_minor__) +# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__) +# if defined(_MSC_VER) + /* _MSC_VER = VVRR */ +# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) +# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) +# endif + +#elif defined(__LCC__) && (defined(__GNUC__) || defined(__GNUG__) || defined(__MCST__)) +# define COMPILER_ID "LCC" +# define COMPILER_VERSION_MAJOR DEC(__LCC__ / 100) +# define COMPILER_VERSION_MINOR DEC(__LCC__ % 100) +# if defined(__LCC_MINOR__) +# define COMPILER_VERSION_PATCH DEC(__LCC_MINOR__) +# endif +# if defined(__GNUC__) && defined(__GNUC_MINOR__) +# define SIMULATE_ID "GNU" +# define SIMULATE_VERSION_MAJOR DEC(__GNUC__) +# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__) +# if defined(__GNUC_PATCHLEVEL__) +# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +# endif +# endif + +#elif defined(__GNUC__) || defined(__GNUG__) +# define COMPILER_ID "GNU" +# if defined(__GNUC__) +# define COMPILER_VERSION_MAJOR DEC(__GNUC__) +# else +# define COMPILER_VERSION_MAJOR DEC(__GNUG__) +# endif +# if defined(__GNUC_MINOR__) +# define COMPILER_VERSION_MINOR DEC(__GNUC_MINOR__) +# endif +# if defined(__GNUC_PATCHLEVEL__) +# define COMPILER_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) +# endif + +#elif defined(_MSC_VER) +# define COMPILER_ID "MSVC" + /* _MSC_VER = VVRR */ +# define COMPILER_VERSION_MAJOR DEC(_MSC_VER / 100) +# define COMPILER_VERSION_MINOR DEC(_MSC_VER % 100) +# if defined(_MSC_FULL_VER) +# if _MSC_VER >= 1400 + /* _MSC_FULL_VER = VVRRPPPPP */ +# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 100000) +# else + /* _MSC_FULL_VER = VVRRPPPP */ +# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 10000) +# endif +# endif +# if defined(_MSC_BUILD) +# define COMPILER_VERSION_TWEAK DEC(_MSC_BUILD) +# endif + +#elif defined(_ADI_COMPILER) +# define COMPILER_ID "ADSP" +#if defined(__VERSIONNUM__) + /* __VERSIONNUM__ = 0xVVRRPPTT */ +# define COMPILER_VERSION_MAJOR DEC(__VERSIONNUM__ >> 24 & 0xFF) +# define COMPILER_VERSION_MINOR DEC(__VERSIONNUM__ >> 16 & 0xFF) +# define COMPILER_VERSION_PATCH DEC(__VERSIONNUM__ >> 8 & 0xFF) +# define COMPILER_VERSION_TWEAK DEC(__VERSIONNUM__ & 0xFF) +#endif + +#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC) +# define COMPILER_ID "IAR" +# if defined(__VER__) && defined(__ICCARM__) +# define COMPILER_VERSION_MAJOR DEC((__VER__) / 1000000) +# define COMPILER_VERSION_MINOR DEC(((__VER__) / 1000) % 1000) +# define COMPILER_VERSION_PATCH DEC((__VER__) % 1000) +# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__) +# elif defined(__VER__) && (defined(__ICCAVR__) || defined(__ICCRX__) || defined(__ICCRH850__) || defined(__ICCRL78__) || defined(__ICC430__) || defined(__ICCRISCV__) || defined(__ICCV850__) || defined(__ICC8051__) || defined(__ICCSTM8__)) +# define COMPILER_VERSION_MAJOR DEC((__VER__) / 100) +# define COMPILER_VERSION_MINOR DEC((__VER__) - (((__VER__) / 100)*100)) +# define COMPILER_VERSION_PATCH DEC(__SUBVERSION__) +# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__) +# endif + +#elif defined(__DCC__) && defined(_DIAB_TOOL) +# define COMPILER_ID "Diab" + # define COMPILER_VERSION_MAJOR DEC(__VERSION_MAJOR_NUMBER__) + # define COMPILER_VERSION_MINOR DEC(__VERSION_MINOR_NUMBER__) + # define COMPILER_VERSION_PATCH DEC(__VERSION_ARCH_FEATURE_NUMBER__) + # define COMPILER_VERSION_TWEAK DEC(__VERSION_BUG_FIX_NUMBER__) + + + +/* These compilers are either not known or too old to define an + identification macro. Try to identify the platform and guess that + it is the native compiler. */ +#elif defined(__hpux) || defined(__hpua) +# define COMPILER_ID "HP" + +#else /* unknown compiler */ +# define COMPILER_ID "" +#endif + +/* Construct the string literal in pieces to prevent the source from + getting matched. Store it in a pointer rather than an array + because some compilers will just produce instructions to fill the + array rather than assigning a pointer to a static array. */ +char const* info_compiler = "INFO" ":" "compiler[" COMPILER_ID "]"; +#ifdef SIMULATE_ID +char const* info_simulate = "INFO" ":" "simulate[" SIMULATE_ID "]"; +#endif + +#ifdef __QNXNTO__ +char const* qnxnto = "INFO" ":" "qnxnto[]"; +#endif + +#if defined(__CRAYXT_COMPUTE_LINUX_TARGET) +char const *info_cray = "INFO" ":" "compiler_wrapper[CrayPrgEnv]"; +#endif + +#define STRINGIFY_HELPER(X) #X +#define STRINGIFY(X) STRINGIFY_HELPER(X) + +/* Identify known platforms by name. */ +#if defined(__linux) || defined(__linux__) || defined(linux) +# define PLATFORM_ID "Linux" + +#elif defined(__MSYS__) +# define PLATFORM_ID "MSYS" + +#elif defined(__CYGWIN__) +# define PLATFORM_ID "Cygwin" + +#elif defined(__MINGW32__) +# define PLATFORM_ID "MinGW" + +#elif defined(__APPLE__) +# define PLATFORM_ID "Darwin" + +#elif defined(_WIN32) || defined(__WIN32__) || defined(WIN32) +# define PLATFORM_ID "Windows" + +#elif defined(__FreeBSD__) || defined(__FreeBSD) +# define PLATFORM_ID "FreeBSD" + +#elif defined(__NetBSD__) || defined(__NetBSD) +# define PLATFORM_ID "NetBSD" + +#elif defined(__OpenBSD__) || defined(__OPENBSD) +# define PLATFORM_ID "OpenBSD" + +#elif defined(__sun) || defined(sun) +# define PLATFORM_ID "SunOS" + +#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__) +# define PLATFORM_ID "AIX" + +#elif defined(__hpux) || defined(__hpux__) +# define PLATFORM_ID "HP-UX" + +#elif defined(__HAIKU__) +# define PLATFORM_ID "Haiku" + +#elif defined(__BeOS) || defined(__BEOS__) || defined(_BEOS) +# define PLATFORM_ID "BeOS" + +#elif defined(__QNX__) || defined(__QNXNTO__) +# define PLATFORM_ID "QNX" + +#elif defined(__tru64) || defined(_tru64) || defined(__TRU64__) +# define PLATFORM_ID "Tru64" + +#elif defined(__riscos) || defined(__riscos__) +# define PLATFORM_ID "RISCos" + +#elif defined(__sinix) || defined(__sinix__) || defined(__SINIX__) +# define PLATFORM_ID "SINIX" + +#elif defined(__UNIX_SV__) +# define PLATFORM_ID "UNIX_SV" + +#elif defined(__bsdos__) +# define PLATFORM_ID "BSDOS" + +#elif defined(_MPRAS) || defined(MPRAS) +# define PLATFORM_ID "MP-RAS" + +#elif defined(__osf) || defined(__osf__) +# define PLATFORM_ID "OSF1" + +#elif defined(_SCO_SV) || defined(SCO_SV) || defined(sco_sv) +# define PLATFORM_ID "SCO_SV" + +#elif defined(__ultrix) || defined(__ultrix__) || defined(_ULTRIX) +# define PLATFORM_ID "ULTRIX" + +#elif defined(__XENIX__) || defined(_XENIX) || defined(XENIX) +# define PLATFORM_ID "Xenix" + +#elif defined(__WATCOMC__) +# if defined(__LINUX__) +# define PLATFORM_ID "Linux" + +# elif defined(__DOS__) +# define PLATFORM_ID "DOS" + +# elif defined(__OS2__) +# define PLATFORM_ID "OS2" + +# elif defined(__WINDOWS__) +# define PLATFORM_ID "Windows3x" + +# elif defined(__VXWORKS__) +# define PLATFORM_ID "VxWorks" + +# else /* unknown platform */ +# define PLATFORM_ID +# endif + +#elif defined(__INTEGRITY) +# if defined(INT_178B) +# define PLATFORM_ID "Integrity178" + +# else /* regular Integrity */ +# define PLATFORM_ID "Integrity" +# endif + +# elif defined(_ADI_COMPILER) +# define PLATFORM_ID "ADSP" + +#else /* unknown platform */ +# define PLATFORM_ID + +#endif + +/* For windows compilers MSVC and Intel we can determine + the architecture of the compiler being used. This is because + the compilers do not have flags that can change the architecture, + but rather depend on which compiler is being used +*/ +#if defined(_WIN32) && defined(_MSC_VER) +# if defined(_M_IA64) +# define ARCHITECTURE_ID "IA64" + +# elif defined(_M_ARM64EC) +# define ARCHITECTURE_ID "ARM64EC" + +# elif defined(_M_X64) || defined(_M_AMD64) +# define ARCHITECTURE_ID "x64" + +# elif defined(_M_IX86) +# define ARCHITECTURE_ID "X86" + +# elif defined(_M_ARM64) +# define ARCHITECTURE_ID "ARM64" + +# elif defined(_M_ARM) +# if _M_ARM == 4 +# define ARCHITECTURE_ID "ARMV4I" +# elif _M_ARM == 5 +# define ARCHITECTURE_ID "ARMV5I" +# else +# define ARCHITECTURE_ID "ARMV" STRINGIFY(_M_ARM) +# endif + +# elif defined(_M_MIPS) +# define ARCHITECTURE_ID "MIPS" + +# elif defined(_M_SH) +# define ARCHITECTURE_ID "SHx" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__WATCOMC__) +# if defined(_M_I86) +# define ARCHITECTURE_ID "I86" + +# elif defined(_M_IX86) +# define ARCHITECTURE_ID "X86" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC) +# if defined(__ICCARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__ICCRX__) +# define ARCHITECTURE_ID "RX" + +# elif defined(__ICCRH850__) +# define ARCHITECTURE_ID "RH850" + +# elif defined(__ICCRL78__) +# define ARCHITECTURE_ID "RL78" + +# elif defined(__ICCRISCV__) +# define ARCHITECTURE_ID "RISCV" + +# elif defined(__ICCAVR__) +# define ARCHITECTURE_ID "AVR" + +# elif defined(__ICC430__) +# define ARCHITECTURE_ID "MSP430" + +# elif defined(__ICCV850__) +# define ARCHITECTURE_ID "V850" + +# elif defined(__ICC8051__) +# define ARCHITECTURE_ID "8051" + +# elif defined(__ICCSTM8__) +# define ARCHITECTURE_ID "STM8" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__ghs__) +# if defined(__PPC64__) +# define ARCHITECTURE_ID "PPC64" + +# elif defined(__ppc__) +# define ARCHITECTURE_ID "PPC" + +# elif defined(__ARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__x86_64__) +# define ARCHITECTURE_ID "x64" + +# elif defined(__i386__) +# define ARCHITECTURE_ID "X86" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__clang__) && defined(__ti__) +# if defined(__ARM_ARCH) +# define ARCHITECTURE_ID "ARM" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__TI_COMPILER_VERSION__) +# if defined(__TI_ARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__MSP430__) +# define ARCHITECTURE_ID "MSP430" + +# elif defined(__TMS320C28XX__) +# define ARCHITECTURE_ID "TMS320C28x" + +# elif defined(__TMS320C6X__) || defined(_TMS320C6X) +# define ARCHITECTURE_ID "TMS320C6x" + +# else /* unknown architecture */ +# define ARCHITECTURE_ID "" +# endif + +# elif defined(__ADSPSHARC__) +# define ARCHITECTURE_ID "SHARC" + +# elif defined(__ADSPBLACKFIN__) +# define ARCHITECTURE_ID "Blackfin" + +#elif defined(__TASKING__) + +# if defined(__CTC__) || defined(__CPTC__) +# define ARCHITECTURE_ID "TriCore" + +# elif defined(__CMCS__) +# define ARCHITECTURE_ID "MCS" + +# elif defined(__CARM__) || defined(__CPARM__) +# define ARCHITECTURE_ID "ARM" + +# elif defined(__CARC__) +# define ARCHITECTURE_ID "ARC" + +# elif defined(__C51__) +# define ARCHITECTURE_ID "8051" + +# elif defined(__CPCP__) +# define ARCHITECTURE_ID "PCP" + +# else +# define ARCHITECTURE_ID "" +# endif + +#elif defined(__RENESAS__) +# if defined(__CCRX__) +# define ARCHITECTURE_ID "RX" + +# elif defined(__CCRL__) +# define ARCHITECTURE_ID "RL78" + +# elif defined(__CCRH__) +# define ARCHITECTURE_ID "RH850" + +# else +# define ARCHITECTURE_ID "" +# endif + +#else +# define ARCHITECTURE_ID +#endif + +/* Convert integer to decimal digit literals. */ +#define DEC(n) \ + ('0' + (((n) / 10000000)%10)), \ + ('0' + (((n) / 1000000)%10)), \ + ('0' + (((n) / 100000)%10)), \ + ('0' + (((n) / 10000)%10)), \ + ('0' + (((n) / 1000)%10)), \ + ('0' + (((n) / 100)%10)), \ + ('0' + (((n) / 10)%10)), \ + ('0' + ((n) % 10)) + +/* Convert integer to hex digit literals. */ +#define HEX(n) \ + ('0' + ((n)>>28 & 0xF)), \ + ('0' + ((n)>>24 & 0xF)), \ + ('0' + ((n)>>20 & 0xF)), \ + ('0' + ((n)>>16 & 0xF)), \ + ('0' + ((n)>>12 & 0xF)), \ + ('0' + ((n)>>8 & 0xF)), \ + ('0' + ((n)>>4 & 0xF)), \ + ('0' + ((n) & 0xF)) + +/* Construct a string literal encoding the version number. */ +#ifdef COMPILER_VERSION +char const* info_version = "INFO" ":" "compiler_version[" COMPILER_VERSION "]"; + +/* Construct a string literal encoding the version number components. */ +#elif defined(COMPILER_VERSION_MAJOR) +char const info_version[] = { + 'I', 'N', 'F', 'O', ':', + 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','[', + COMPILER_VERSION_MAJOR, +# ifdef COMPILER_VERSION_MINOR + '.', COMPILER_VERSION_MINOR, +# ifdef COMPILER_VERSION_PATCH + '.', COMPILER_VERSION_PATCH, +# ifdef COMPILER_VERSION_TWEAK + '.', COMPILER_VERSION_TWEAK, +# endif +# endif +# endif + ']','\0'}; +#endif + +/* Construct a string literal encoding the internal version number. */ +#ifdef COMPILER_VERSION_INTERNAL +char const info_version_internal[] = { + 'I', 'N', 'F', 'O', ':', + 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','_', + 'i','n','t','e','r','n','a','l','[', + COMPILER_VERSION_INTERNAL,']','\0'}; +#elif defined(COMPILER_VERSION_INTERNAL_STR) +char const* info_version_internal = "INFO" ":" "compiler_version_internal[" COMPILER_VERSION_INTERNAL_STR "]"; +#endif + +/* Construct a string literal encoding the version number components. */ +#ifdef SIMULATE_VERSION_MAJOR +char const info_simulate_version[] = { + 'I', 'N', 'F', 'O', ':', + 's','i','m','u','l','a','t','e','_','v','e','r','s','i','o','n','[', + SIMULATE_VERSION_MAJOR, +# ifdef SIMULATE_VERSION_MINOR + '.', SIMULATE_VERSION_MINOR, +# ifdef SIMULATE_VERSION_PATCH + '.', SIMULATE_VERSION_PATCH, +# ifdef SIMULATE_VERSION_TWEAK + '.', SIMULATE_VERSION_TWEAK, +# endif +# endif +# endif + ']','\0'}; +#endif + +/* Construct the string literal in pieces to prevent the source from + getting matched. Store it in a pointer rather than an array + because some compilers will just produce instructions to fill the + array rather than assigning a pointer to a static array. */ +char const* info_platform = "INFO" ":" "platform[" PLATFORM_ID "]"; +char const* info_arch = "INFO" ":" "arch[" ARCHITECTURE_ID "]"; + + + +#define CXX_STD_98 199711L +#define CXX_STD_11 201103L +#define CXX_STD_14 201402L +#define CXX_STD_17 201703L +#define CXX_STD_20 202002L +#define CXX_STD_23 202302L + +#if defined(__INTEL_COMPILER) && defined(_MSVC_LANG) +# if _MSVC_LANG > CXX_STD_17 +# define CXX_STD _MSVC_LANG +# elif _MSVC_LANG == CXX_STD_17 && defined(__cpp_aggregate_paren_init) +# define CXX_STD CXX_STD_20 +# elif _MSVC_LANG > CXX_STD_14 && __cplusplus > CXX_STD_17 +# define CXX_STD CXX_STD_20 +# elif _MSVC_LANG > CXX_STD_14 +# define CXX_STD CXX_STD_17 +# elif defined(__INTEL_CXX11_MODE__) && defined(__cpp_aggregate_nsdmi) +# define CXX_STD CXX_STD_14 +# elif defined(__INTEL_CXX11_MODE__) +# define CXX_STD CXX_STD_11 +# else +# define CXX_STD CXX_STD_98 +# endif +#elif defined(_MSC_VER) && defined(_MSVC_LANG) +# if _MSVC_LANG > __cplusplus +# define CXX_STD _MSVC_LANG +# else +# define CXX_STD __cplusplus +# endif +#elif defined(__NVCOMPILER) +# if __cplusplus == CXX_STD_17 && defined(__cpp_aggregate_paren_init) +# define CXX_STD CXX_STD_20 +# else +# define CXX_STD __cplusplus +# endif +#elif defined(__INTEL_COMPILER) || defined(__PGI) +# if __cplusplus == CXX_STD_11 && defined(__cpp_namespace_attributes) +# define CXX_STD CXX_STD_17 +# elif __cplusplus == CXX_STD_11 && defined(__cpp_aggregate_nsdmi) +# define CXX_STD CXX_STD_14 +# else +# define CXX_STD __cplusplus +# endif +#elif (defined(__IBMCPP__) || defined(__ibmxl__)) && defined(__linux__) +# if __cplusplus == CXX_STD_11 && defined(__cpp_aggregate_nsdmi) +# define CXX_STD CXX_STD_14 +# else +# define CXX_STD __cplusplus +# endif +#elif __cplusplus == 1 && defined(__GXX_EXPERIMENTAL_CXX0X__) +# define CXX_STD CXX_STD_11 +#else +# define CXX_STD __cplusplus +#endif + +const char* info_language_standard_default = "INFO" ":" "standard_default[" +#if CXX_STD > CXX_STD_23 + "26" +#elif CXX_STD > CXX_STD_20 + "23" +#elif CXX_STD > CXX_STD_17 + "20" +#elif CXX_STD > CXX_STD_14 + "17" +#elif CXX_STD > CXX_STD_11 + "14" +#elif CXX_STD >= CXX_STD_11 + "11" +#else + "98" +#endif +"]"; + +const char* info_language_extensions_default = "INFO" ":" "extensions_default[" +#if (defined(__clang__) || defined(__GNUC__) || defined(__xlC__) || \ + defined(__TI_COMPILER_VERSION__) || defined(__RENESAS__)) && \ + !defined(__STRICT_ANSI__) + "ON" +#else + "OFF" +#endif +"]"; + +/*--------------------------------------------------------------------------*/ + +int main(int argc, char* argv[]) +{ + int require = 0; + require += info_compiler[argc]; + require += info_platform[argc]; + require += info_arch[argc]; +#ifdef COMPILER_VERSION_MAJOR + require += info_version[argc]; +#endif +#if defined(COMPILER_VERSION_INTERNAL) || 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"/opt/homebrew/share/cmake/Modules/CMakeDetermineCCompiler.cmake:64 (_cmake_find_compiler)" + - "CMakeLists.txt:3 (project)" + mode: "program" + variable: "CMAKE_C_COMPILER" + description: "C compiler" + settings: + SearchFramework: "FIRST" + SearchAppBundle: "FIRST" + CMAKE_FIND_USE_CMAKE_PATH: true + CMAKE_FIND_USE_CMAKE_ENVIRONMENT_PATH: true + CMAKE_FIND_USE_SYSTEM_ENVIRONMENT_PATH: true + CMAKE_FIND_USE_CMAKE_SYSTEM_PATH: true + CMAKE_FIND_USE_INSTALL_PREFIX: true + names: + - "cc" + - "gcc" + - "cl" + - "bcc" + - "xlc" + - "icx" + - "clang" + candidate_directories: + - "/Users/timatherton/miniconda3/bin/" + - "/Users/timatherton/miniconda3/condabin/" + - "/opt/homebrew/bin/" + - "/opt/homebrew/sbin/" + - "/usr/local/bin/" + - "/System/Cryptexes/App/usr/bin/" + - "/usr/bin/" + - "/bin/" + - "/usr/sbin/" + - "/sbin/" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin/" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin/" + - 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(CMAKE_DETERMINE_COMPILER_ID)" + - "CMakeLists.txt:3 (project)" + message: | + Compiling the C compiler identification source file "CMakeCCompilerId.c" succeeded. + Compiler: /usr/bin/cc + Build flags: + Id flags: + + The output was: + 0 + + + Compilation of the C compiler identification source "CMakeCCompilerId.c" produced "a.out" + + The C compiler identification is AppleClang, found in: + /Users/timatherton/Documents/Programs/packages/morpho-newlinalg/build/CMakeFiles/4.1.0/CompilerIdC/a.out + + - + kind: "message-v1" + backtrace: + - "/opt/homebrew/share/cmake/Modules/CMakeDetermineCompilerId.cmake:290 (message)" + - "/opt/homebrew/share/cmake/Modules/CMakeDetermineCCompiler.cmake:122 (CMAKE_DETERMINE_COMPILER_ID)" + - "CMakeLists.txt:3 (project)" + message: | + Detecting C compiler apple sysroot: "/usr/bin/cc" "-E" "apple-sdk.c" + # 1 "apple-sdk.c" + # 1 "" 1 + # 1 "" 3 + # 465 "" 3 + # 1 "" 1 + # 1 "" 2 + # 1 "apple-sdk.c" 2 + # 1 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+ CMAKE_FIND_USE_SYSTEM_ENVIRONMENT_PATH: true + CMAKE_FIND_USE_CMAKE_SYSTEM_PATH: true + CMAKE_FIND_USE_INSTALL_PREFIX: true + names: + - "tapi" + candidate_directories: + - "/usr/bin/" + - "/Users/timatherton/miniconda3/bin/" + - "/Users/timatherton/miniconda3/condabin/" + - "/opt/homebrew/bin/" + - "/opt/homebrew/sbin/" + - "/usr/local/bin/" + - "/System/Cryptexes/App/usr/bin/" + - "/bin/" + - "/usr/sbin/" + - "/sbin/" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin/" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin/" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/appleinternal/bin/" + - "/Library/Apple/usr/bin/" + - "/Library/TeX/texbin/" + searched_directories: + - "/usr/bin/tapi" + - "/Users/timatherton/miniconda3/bin/tapi" + - "/Users/timatherton/miniconda3/condabin/tapi" + - "/opt/homebrew/bin/tapi" + - "/opt/homebrew/sbin/tapi" + - "/usr/local/bin/tapi" + - "/System/Cryptexes/App/usr/bin/tapi" + - 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SearchAppBundle: "FIRST" + CMAKE_FIND_USE_CMAKE_PATH: true + CMAKE_FIND_USE_CMAKE_ENVIRONMENT_PATH: true + CMAKE_FIND_USE_SYSTEM_ENVIRONMENT_PATH: true + CMAKE_FIND_USE_CMAKE_SYSTEM_PATH: true + CMAKE_FIND_USE_INSTALL_PREFIX: true + names: + - "CMakeCXXCompilerId.cpp.in" + candidate_directories: + - "/opt/homebrew/share/cmake/Modules/" + found: "/opt/homebrew/share/cmake/Modules/CMakeCXXCompilerId.cpp.in" + search_context: + ENV{PATH}: + - "/Users/timatherton/miniconda3/bin" + - "/Users/timatherton/miniconda3/condabin" + - "/opt/homebrew/bin" + - "/opt/homebrew/sbin" + - "/usr/local/bin" + - "/System/Cryptexes/App/usr/bin" + - "/usr/bin" + - "/bin" + - "/usr/sbin" + - "/sbin" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin" + - "/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/appleinternal/bin" + - "/Library/Apple/usr/bin" + - "/Library/TeX/texbin" + - + kind: 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"/opt/homebrew/share/cmake/Modules/CMakeDetermineCXXCompiler.cmake:125 (CMAKE_DETERMINE_COMPILER_ID)" + - "CMakeLists.txt:3 (project)" + message: | + Detecting CXX compiler apple sysroot: "/usr/bin/c++" "-E" "apple-sdk.cpp" + # 1 "apple-sdk.cpp" + # 1 "" 1 + # 1 "" 3 + # 513 "" 3 + # 1 "" 1 + # 1 "" 2 + # 1 "apple-sdk.cpp" 2 + # 1 "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/AvailabilityMacros.h" 1 3 4 + # 89 "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/AvailabilityMacros.h" 3 4 + # 1 "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/AvailabilityVersions.h" 1 3 4 + # 90 "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/AvailabilityMacros.h" 2 3 4 + # 1 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- -#elif defined(__FUJITSU) -# define COMPILER_ID "Fujitsu" -# if defined(__FCC_version__) -# define COMPILER_VERSION __FCC_version__ -# elif defined(__FCC_major__) -# define COMPILER_VERSION_MAJOR DEC(__FCC_major__) -# define COMPILER_VERSION_MINOR DEC(__FCC_minor__) -# define COMPILER_VERSION_PATCH DEC(__FCC_patchlevel__) -# endif -# if defined(__fcc_version) -# define COMPILER_VERSION_INTERNAL DEC(__fcc_version) -# elif defined(__FCC_VERSION) -# define COMPILER_VERSION_INTERNAL DEC(__FCC_VERSION) -# endif - - -#elif defined(__ghs__) -# define COMPILER_ID "GHS" -/* __GHS_VERSION_NUMBER = VVVVRP */ -# ifdef __GHS_VERSION_NUMBER -# define COMPILER_VERSION_MAJOR DEC(__GHS_VERSION_NUMBER / 100) -# define COMPILER_VERSION_MINOR DEC(__GHS_VERSION_NUMBER / 10 % 10) -# define COMPILER_VERSION_PATCH DEC(__GHS_VERSION_NUMBER % 10) -# endif - -#elif defined(__TASKING__) -# define COMPILER_ID "Tasking" - # define COMPILER_VERSION_MAJOR DEC(__VERSION__/1000) - # define COMPILER_VERSION_MINOR DEC(__VERSION__ % 100) -# define COMPILER_VERSION_INTERNAL DEC(__VERSION__) - -#elif defined(__ORANGEC__) -# define COMPILER_ID "OrangeC" -# define COMPILER_VERSION_MAJOR DEC(__ORANGEC_MAJOR__) -# define COMPILER_VERSION_MINOR DEC(__ORANGEC_MINOR__) -# define COMPILER_VERSION_PATCH DEC(__ORANGEC_PATCHLEVEL__) - -#elif defined(__RENESAS__) -# define COMPILER_ID "Renesas" -/* __RENESAS_VERSION__ = 0xVVRRPP00 */ -# define COMPILER_VERSION_MAJOR HEX(__RENESAS_VERSION__ >> 24 & 0xFF) -# define COMPILER_VERSION_MINOR HEX(__RENESAS_VERSION__ >> 16 & 0xFF) -# define COMPILER_VERSION_PATCH HEX(__RENESAS_VERSION__ >> 8 & 0xFF) - -#elif defined(__TINYC__) -# define COMPILER_ID "TinyCC" - -#elif defined(__BCC__) -# define COMPILER_ID "Bruce" - -#elif defined(__SCO_VERSION__) -# define COMPILER_ID "SCO" - -#elif defined(__ARMCC_VERSION) && !defined(__clang__) -# define COMPILER_ID "ARMCC" -#if __ARMCC_VERSION >= 1000000 - /* __ARMCC_VERSION = VRRPPPP */ - # define COMPILER_VERSION_MAJOR DEC(__ARMCC_VERSION/1000000) - # define COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 100) - 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# define COMPILER_VERSION_MINOR DEC(__ARMCOMPILER_VERSION/10000 % 100) - # define COMPILER_VERSION_PATCH DEC(__ARMCOMPILER_VERSION/100 % 100) -# define COMPILER_VERSION_INTERNAL DEC(__ARMCOMPILER_VERSION) - -#elif defined(__clang__) && defined(__ti__) -# define COMPILER_ID "TIClang" - # define COMPILER_VERSION_MAJOR DEC(__ti_major__) - # define COMPILER_VERSION_MINOR DEC(__ti_minor__) - # define COMPILER_VERSION_PATCH DEC(__ti_patchlevel__) -# define COMPILER_VERSION_INTERNAL DEC(__ti_version__) - -#elif defined(__clang__) -# define COMPILER_ID "Clang" -# if defined(_MSC_VER) -# define SIMULATE_ID "MSVC" -# endif -# define COMPILER_VERSION_MAJOR DEC(__clang_major__) -# define COMPILER_VERSION_MINOR DEC(__clang_minor__) -# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__) -# if defined(_MSC_VER) - /* _MSC_VER = VVRR */ -# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100) -# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100) -# endif - -#elif defined(__LCC__) && (defined(__GNUC__) || defined(__GNUG__) || defined(__MCST__)) -# define COMPILER_ID "LCC" -# define COMPILER_VERSION_MAJOR DEC(__LCC__ / 100) -# define COMPILER_VERSION_MINOR DEC(__LCC__ % 100) -# if defined(__LCC_MINOR__) -# define COMPILER_VERSION_PATCH DEC(__LCC_MINOR__) -# endif -# if defined(__GNUC__) && defined(__GNUC_MINOR__) -# define SIMULATE_ID "GNU" -# define SIMULATE_VERSION_MAJOR DEC(__GNUC__) -# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__) -# if defined(__GNUC_PATCHLEVEL__) -# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__) -# endif -# endif - 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# define COMPILER_VERSION_MINOR DEC(__VERSION_MINOR_NUMBER__) - # define COMPILER_VERSION_PATCH DEC(__VERSION_ARCH_FEATURE_NUMBER__) - # define COMPILER_VERSION_TWEAK DEC(__VERSION_BUG_FIX_NUMBER__) - - -#elif defined(__SDCC_VERSION_MAJOR) || defined(SDCC) -# define COMPILER_ID "SDCC" -# if defined(__SDCC_VERSION_MAJOR) -# define COMPILER_VERSION_MAJOR DEC(__SDCC_VERSION_MAJOR) -# define COMPILER_VERSION_MINOR DEC(__SDCC_VERSION_MINOR) -# define COMPILER_VERSION_PATCH DEC(__SDCC_VERSION_PATCH) -# else - /* SDCC = VRP */ -# define COMPILER_VERSION_MAJOR DEC(SDCC/100) -# define COMPILER_VERSION_MINOR DEC(SDCC/10 % 10) -# define COMPILER_VERSION_PATCH DEC(SDCC % 10) -# endif - - -/* These compilers are either not known or too old to define an - identification macro. Try to identify the platform and guess that - it is the native compiler. */ -#elif defined(__hpux) || defined(__hpua) -# define COMPILER_ID "HP" - -#else /* unknown compiler */ -# define COMPILER_ID "" -#endif - -/* Construct the string literal in pieces to prevent the source from - getting matched. Store it in a pointer rather than an array - because some compilers will just produce instructions to fill the - array rather than assigning a pointer to a static array. */ -char const* info_compiler = "INFO" ":" "compiler[" COMPILER_ID "]"; -#ifdef SIMULATE_ID -char const* info_simulate = "INFO" ":" "simulate[" SIMULATE_ID "]"; -#endif - -#ifdef __QNXNTO__ -char const* qnxnto = "INFO" ":" "qnxnto[]"; -#endif - -#if defined(__CRAYXT_COMPUTE_LINUX_TARGET) -char const *info_cray = "INFO" ":" "compiler_wrapper[CrayPrgEnv]"; -#endif - -#define STRINGIFY_HELPER(X) #X -#define STRINGIFY(X) STRINGIFY_HELPER(X) - -/* Identify known platforms by name. */ -#if defined(__linux) || defined(__linux__) || defined(linux) -# define PLATFORM_ID "Linux" - -#elif defined(__MSYS__) -# define PLATFORM_ID "MSYS" - -#elif defined(__CYGWIN__) -# define PLATFORM_ID "Cygwin" - -#elif defined(__MINGW32__) -# define PLATFORM_ID "MinGW" - -#elif defined(__APPLE__) -# define PLATFORM_ID "Darwin" - -#elif defined(_WIN32) || defined(__WIN32__) || defined(WIN32) -# define PLATFORM_ID "Windows" - -#elif defined(__FreeBSD__) || defined(__FreeBSD) -# define PLATFORM_ID "FreeBSD" - -#elif defined(__NetBSD__) || defined(__NetBSD) -# define PLATFORM_ID "NetBSD" - -#elif defined(__OpenBSD__) || defined(__OPENBSD) -# define PLATFORM_ID "OpenBSD" - -#elif defined(__sun) || defined(sun) -# define PLATFORM_ID "SunOS" - -#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__) -# define PLATFORM_ID "AIX" - -#elif defined(__hpux) || defined(__hpux__) -# define PLATFORM_ID "HP-UX" - -#elif defined(__HAIKU__) -# define PLATFORM_ID "Haiku" - -#elif defined(__BeOS) || defined(__BEOS__) || defined(_BEOS) -# define PLATFORM_ID "BeOS" - -#elif defined(__QNX__) || defined(__QNXNTO__) -# define PLATFORM_ID "QNX" - -#elif defined(__tru64) || defined(_tru64) || defined(__TRU64__) -# define PLATFORM_ID "Tru64" - -#elif defined(__riscos) || defined(__riscos__) -# define PLATFORM_ID "RISCos" - -#elif defined(__sinix) || defined(__sinix__) || defined(__SINIX__) -# define PLATFORM_ID "SINIX" - -#elif defined(__UNIX_SV__) -# define PLATFORM_ID "UNIX_SV" - -#elif defined(__bsdos__) -# define PLATFORM_ID "BSDOS" - -#elif defined(_MPRAS) || defined(MPRAS) -# define PLATFORM_ID "MP-RAS" - -#elif defined(__osf) || defined(__osf__) -# define PLATFORM_ID "OSF1" - -#elif defined(_SCO_SV) || defined(SCO_SV) || defined(sco_sv) -# define PLATFORM_ID "SCO_SV" - -#elif defined(__ultrix) || defined(__ultrix__) || defined(_ULTRIX) -# define PLATFORM_ID "ULTRIX" - -#elif defined(__XENIX__) || defined(_XENIX) || defined(XENIX) -# define PLATFORM_ID "Xenix" - -#elif defined(__WATCOMC__) -# if defined(__LINUX__) -# define PLATFORM_ID "Linux" - -# elif defined(__DOS__) -# define PLATFORM_ID "DOS" - -# elif defined(__OS2__) -# define PLATFORM_ID "OS2" - -# elif defined(__WINDOWS__) -# define PLATFORM_ID "Windows3x" - -# elif defined(__VXWORKS__) -# define PLATFORM_ID "VxWorks" - -# else /* unknown platform */ -# define PLATFORM_ID -# endif - -#elif defined(__INTEGRITY) -# if defined(INT_178B) -# define PLATFORM_ID "Integrity178" - -# else /* regular Integrity */ -# define PLATFORM_ID "Integrity" -# endif - -# elif defined(_ADI_COMPILER) -# define PLATFORM_ID "ADSP" - -#else /* unknown platform */ -# define PLATFORM_ID - -#endif - -/* For windows compilers MSVC and Intel we can determine - the architecture of the compiler being used. This is because - the compilers do not have flags that can change the architecture, - but rather depend on which compiler is being used -*/ -#if defined(_WIN32) && defined(_MSC_VER) -# if defined(_M_IA64) -# define ARCHITECTURE_ID "IA64" - -# elif defined(_M_ARM64EC) -# define ARCHITECTURE_ID "ARM64EC" - -# elif defined(_M_X64) || defined(_M_AMD64) -# define ARCHITECTURE_ID "x64" - -# elif defined(_M_IX86) -# define ARCHITECTURE_ID "X86" - -# elif defined(_M_ARM64) -# define ARCHITECTURE_ID "ARM64" - -# elif defined(_M_ARM) -# if _M_ARM == 4 -# define ARCHITECTURE_ID "ARMV4I" -# elif _M_ARM == 5 -# define ARCHITECTURE_ID "ARMV5I" -# else -# define ARCHITECTURE_ID "ARMV" STRINGIFY(_M_ARM) -# endif - -# elif defined(_M_MIPS) -# define ARCHITECTURE_ID "MIPS" - -# elif defined(_M_SH) -# define ARCHITECTURE_ID "SHx" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__WATCOMC__) -# if defined(_M_I86) -# define ARCHITECTURE_ID "I86" - -# elif defined(_M_IX86) -# define ARCHITECTURE_ID "X86" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC) -# if defined(__ICCARM__) -# define ARCHITECTURE_ID "ARM" - -# elif defined(__ICCRX__) -# define ARCHITECTURE_ID "RX" - -# elif defined(__ICCRH850__) -# define ARCHITECTURE_ID "RH850" - -# elif defined(__ICCRL78__) -# define ARCHITECTURE_ID "RL78" - -# elif defined(__ICCRISCV__) -# define ARCHITECTURE_ID "RISCV" - -# elif defined(__ICCAVR__) -# define ARCHITECTURE_ID "AVR" - -# elif defined(__ICC430__) -# define ARCHITECTURE_ID "MSP430" - -# elif defined(__ICCV850__) -# define ARCHITECTURE_ID "V850" - -# elif defined(__ICC8051__) -# define ARCHITECTURE_ID "8051" - -# elif defined(__ICCSTM8__) -# define ARCHITECTURE_ID "STM8" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__ghs__) -# if defined(__PPC64__) -# define ARCHITECTURE_ID "PPC64" - -# elif defined(__ppc__) -# define ARCHITECTURE_ID "PPC" - -# elif defined(__ARM__) -# define ARCHITECTURE_ID "ARM" - -# elif defined(__x86_64__) -# define ARCHITECTURE_ID "x64" - -# elif defined(__i386__) -# define ARCHITECTURE_ID "X86" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__clang__) && defined(__ti__) -# if defined(__ARM_ARCH) -# define ARCHITECTURE_ID "ARM" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__TI_COMPILER_VERSION__) -# if defined(__TI_ARM__) -# define ARCHITECTURE_ID "ARM" - -# elif defined(__MSP430__) -# define ARCHITECTURE_ID "MSP430" - -# elif defined(__TMS320C28XX__) -# define ARCHITECTURE_ID "TMS320C28x" - -# elif defined(__TMS320C6X__) || defined(_TMS320C6X) -# define ARCHITECTURE_ID "TMS320C6x" - -# else /* unknown architecture */ -# define ARCHITECTURE_ID "" -# endif - -# elif defined(__ADSPSHARC__) -# define ARCHITECTURE_ID "SHARC" - -# elif defined(__ADSPBLACKFIN__) -# define ARCHITECTURE_ID "Blackfin" - -#elif defined(__TASKING__) - -# if defined(__CTC__) || defined(__CPTC__) -# define ARCHITECTURE_ID "TriCore" - -# elif defined(__CMCS__) -# define ARCHITECTURE_ID "MCS" - -# elif defined(__CARM__) || defined(__CPARM__) -# define ARCHITECTURE_ID "ARM" - -# elif defined(__CARC__) -# define ARCHITECTURE_ID "ARC" - -# elif defined(__C51__) -# define ARCHITECTURE_ID "8051" - -# elif defined(__CPCP__) -# define ARCHITECTURE_ID "PCP" - -# else -# define ARCHITECTURE_ID "" -# endif - -#elif defined(__RENESAS__) -# if defined(__CCRX__) -# define ARCHITECTURE_ID "RX" - -# elif defined(__CCRL__) -# define ARCHITECTURE_ID "RL78" - -# elif defined(__CCRH__) -# define ARCHITECTURE_ID "RH850" - -# else -# define ARCHITECTURE_ID "" -# endif - -#else -# define ARCHITECTURE_ID -#endif - -/* Convert integer to decimal digit literals. */ -#define DEC(n) \ - ('0' + (((n) / 10000000)%10)), \ - ('0' + (((n) / 1000000)%10)), \ - ('0' + (((n) / 100000)%10)), \ - ('0' + (((n) / 10000)%10)), \ - ('0' + (((n) / 1000)%10)), \ - ('0' + (((n) / 100)%10)), \ - ('0' + (((n) / 10)%10)), \ - ('0' + ((n) % 10)) - -/* Convert integer to hex digit literals. */ -#define HEX(n) \ - ('0' + ((n)>>28 & 0xF)), \ - ('0' + ((n)>>24 & 0xF)), \ - ('0' + ((n)>>20 & 0xF)), \ - ('0' + ((n)>>16 & 0xF)), \ - ('0' + ((n)>>12 & 0xF)), \ - ('0' + ((n)>>8 & 0xF)), \ - ('0' + ((n)>>4 & 0xF)), \ - ('0' + ((n) & 0xF)) - -/* Construct a string literal encoding the version number. */ -#ifdef COMPILER_VERSION -char const* info_version = "INFO" ":" "compiler_version[" COMPILER_VERSION "]"; - -/* Construct a string literal encoding the version number components. */ -#elif defined(COMPILER_VERSION_MAJOR) -char const info_version[] = { - 'I', 'N', 'F', 'O', ':', - 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','[', - COMPILER_VERSION_MAJOR, -# ifdef COMPILER_VERSION_MINOR - '.', COMPILER_VERSION_MINOR, -# ifdef COMPILER_VERSION_PATCH - '.', COMPILER_VERSION_PATCH, -# ifdef COMPILER_VERSION_TWEAK - '.', COMPILER_VERSION_TWEAK, -# endif -# endif -# endif - ']','\0'}; -#endif - -/* Construct a string literal encoding the internal version number. */ -#ifdef COMPILER_VERSION_INTERNAL -char const info_version_internal[] = { - 'I', 'N', 'F', 'O', ':', - 'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','_', - 'i','n','t','e','r','n','a','l','[', - COMPILER_VERSION_INTERNAL,']','\0'}; -#elif defined(COMPILER_VERSION_INTERNAL_STR) -char const* info_version_internal = "INFO" ":" "compiler_version_internal[" COMPILER_VERSION_INTERNAL_STR "]"; -#endif - -/* Construct a string literal encoding the version number components. */ -#ifdef SIMULATE_VERSION_MAJOR -char const info_simulate_version[] = { - 'I', 'N', 'F', 'O', ':', - 's','i','m','u','l','a','t','e','_','v','e','r','s','i','o','n','[', - SIMULATE_VERSION_MAJOR, -# ifdef SIMULATE_VERSION_MINOR - '.', SIMULATE_VERSION_MINOR, -# ifdef SIMULATE_VERSION_PATCH - '.', SIMULATE_VERSION_PATCH, -# ifdef SIMULATE_VERSION_TWEAK - '.', SIMULATE_VERSION_TWEAK, -# endif -# endif -# endif - ']','\0'}; -#endif - -/* Construct the string literal in pieces to prevent the source from - getting matched. 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a/test/constructors/complexmatrix_array_constructor.morpho b/newlinalg/test/constructors/complexmatrix_array_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_array_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_array_constructor.morpho diff --git a/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho b/newlinalg/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho similarity index 100% rename from test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho rename to newlinalg/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho diff --git a/test/constructors/complexmatrix_constructor.morpho b/newlinalg/test/constructors/complexmatrix_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_constructor.morpho diff --git a/test/constructors/complexmatrix_constructor_edge_cases.morpho b/newlinalg/test/constructors/complexmatrix_constructor_edge_cases.morpho similarity index 100% rename from test/constructors/complexmatrix_constructor_edge_cases.morpho rename to newlinalg/test/constructors/complexmatrix_constructor_edge_cases.morpho diff --git a/test/constructors/complexmatrix_constructor_invalid_args.morpho b/newlinalg/test/constructors/complexmatrix_constructor_invalid_args.morpho similarity index 100% rename from test/constructors/complexmatrix_constructor_invalid_args.morpho rename to newlinalg/test/constructors/complexmatrix_constructor_invalid_args.morpho diff --git a/test/constructors/complexmatrix_list_constructor.morpho b/newlinalg/test/constructors/complexmatrix_list_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_list_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_list_constructor.morpho diff --git a/test/constructors/complexmatrix_list_vector_constructor.morpho b/newlinalg/test/constructors/complexmatrix_list_vector_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_list_vector_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_list_vector_constructor.morpho diff --git a/test/constructors/complexmatrix_matrix_constructor.morpho b/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_matrix_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho diff --git a/test/constructors/complexmatrix_tuple_column_constructor.morpho b/newlinalg/test/constructors/complexmatrix_tuple_column_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_tuple_column_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_tuple_column_constructor.morpho diff --git a/test/constructors/complexmatrix_tuple_constructor.morpho b/newlinalg/test/constructors/complexmatrix_tuple_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_tuple_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_tuple_constructor.morpho diff --git a/test/constructors/complexmatrix_vector_constructor.morpho b/newlinalg/test/constructors/complexmatrix_vector_constructor.morpho similarity index 100% rename from test/constructors/complexmatrix_vector_constructor.morpho rename to newlinalg/test/constructors/complexmatrix_vector_constructor.morpho diff --git a/test/constructors/matrix_array_constructor.morpho b/newlinalg/test/constructors/matrix_array_constructor.morpho similarity index 100% rename from test/constructors/matrix_array_constructor.morpho rename to newlinalg/test/constructors/matrix_array_constructor.morpho diff --git a/test/constructors/matrix_array_constructor_invalid_dimensions.morpho b/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho similarity index 100% rename from test/constructors/matrix_array_constructor_invalid_dimensions.morpho rename to newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho diff --git a/test/constructors/matrix_constructor.morpho b/newlinalg/test/constructors/matrix_constructor.morpho similarity index 100% rename from test/constructors/matrix_constructor.morpho rename to newlinalg/test/constructors/matrix_constructor.morpho diff --git a/test/constructors/matrix_constructor_edge_cases.morpho b/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho similarity index 100% rename from test/constructors/matrix_constructor_edge_cases.morpho rename to newlinalg/test/constructors/matrix_constructor_edge_cases.morpho diff --git a/test/constructors/matrix_identity_constructor.morpho b/newlinalg/test/constructors/matrix_identity_constructor.morpho similarity index 100% rename from test/constructors/matrix_identity_constructor.morpho rename to newlinalg/test/constructors/matrix_identity_constructor.morpho diff --git a/test/constructors/matrix_list_constructor.morpho b/newlinalg/test/constructors/matrix_list_constructor.morpho similarity index 100% rename from test/constructors/matrix_list_constructor.morpho rename to newlinalg/test/constructors/matrix_list_constructor.morpho diff --git a/test/constructors/matrix_list_vector_constructor.morpho b/newlinalg/test/constructors/matrix_list_vector_constructor.morpho similarity index 100% rename from test/constructors/matrix_list_vector_constructor.morpho rename to newlinalg/test/constructors/matrix_list_vector_constructor.morpho diff --git a/test/constructors/matrix_tuple_constructor.morpho b/newlinalg/test/constructors/matrix_tuple_constructor.morpho similarity index 100% rename from test/constructors/matrix_tuple_constructor.morpho rename to newlinalg/test/constructors/matrix_tuple_constructor.morpho diff --git 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b/newlinalg/test/index/complexmatrix_setcolumn.morpho similarity index 100% rename from test/index/complexmatrix_setcolumn.morpho rename to newlinalg/test/index/complexmatrix_setcolumn.morpho diff --git a/test/index/complexmatrix_setindex.morpho b/newlinalg/test/index/complexmatrix_setindex.morpho similarity index 100% rename from test/index/complexmatrix_setindex.morpho rename to newlinalg/test/index/complexmatrix_setindex.morpho diff --git a/test/index/complexmatrix_setindex_real.morpho b/newlinalg/test/index/complexmatrix_setindex_real.morpho similarity index 100% rename from test/index/complexmatrix_setindex_real.morpho rename to newlinalg/test/index/complexmatrix_setindex_real.morpho diff --git a/test/index/complexmatrix_setslice.morpho b/newlinalg/test/index/complexmatrix_setslice.morpho similarity index 100% rename from test/index/complexmatrix_setslice.morpho rename to newlinalg/test/index/complexmatrix_setslice.morpho diff --git a/test/index/complexmatrix_slice.morpho 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to newlinalg/test/index/matrix_setindex.morpho diff --git a/test/index/matrix_setslice.morpho b/newlinalg/test/index/matrix_setslice.morpho similarity index 100% rename from test/index/matrix_setslice.morpho rename to newlinalg/test/index/matrix_setslice.morpho diff --git a/test/index/matrix_slice.morpho b/newlinalg/test/index/matrix_slice.morpho similarity index 100% rename from test/index/matrix_slice.morpho rename to newlinalg/test/index/matrix_slice.morpho diff --git a/test/index/matrix_slice_bounds.morpho b/newlinalg/test/index/matrix_slice_bounds.morpho similarity index 100% rename from test/index/matrix_slice_bounds.morpho rename to newlinalg/test/index/matrix_slice_bounds.morpho diff --git a/test/index/matrix_slice_infinite_range.morpho b/newlinalg/test/index/matrix_slice_infinite_range.morpho similarity index 100% rename from test/index/matrix_slice_infinite_range.morpho rename to newlinalg/test/index/matrix_slice_infinite_range.morpho diff --git a/test/methods/complexmatrix_conj.morpho b/newlinalg/test/methods/complexmatrix_conj.morpho similarity index 100% rename from test/methods/complexmatrix_conj.morpho rename to newlinalg/test/methods/complexmatrix_conj.morpho diff --git a/test/methods/complexmatrix_conjTranspose.morpho b/newlinalg/test/methods/complexmatrix_conjTranspose.morpho similarity index 100% rename from test/methods/complexmatrix_conjTranspose.morpho rename to newlinalg/test/methods/complexmatrix_conjTranspose.morpho diff --git a/test/methods/complexmatrix_count.morpho b/newlinalg/test/methods/complexmatrix_count.morpho similarity index 100% rename from test/methods/complexmatrix_count.morpho rename to newlinalg/test/methods/complexmatrix_count.morpho diff --git a/test/methods/complexmatrix_dimensions.morpho b/newlinalg/test/methods/complexmatrix_dimensions.morpho similarity index 100% rename from test/methods/complexmatrix_dimensions.morpho rename to newlinalg/test/methods/complexmatrix_dimensions.morpho diff --git a/test/methods/complexmatrix_eigensystem.morpho b/newlinalg/test/methods/complexmatrix_eigensystem.morpho similarity index 100% rename from test/methods/complexmatrix_eigensystem.morpho rename to newlinalg/test/methods/complexmatrix_eigensystem.morpho diff --git a/test/methods/complexmatrix_eigenvalues.morpho b/newlinalg/test/methods/complexmatrix_eigenvalues.morpho similarity index 100% rename from test/methods/complexmatrix_eigenvalues.morpho rename to newlinalg/test/methods/complexmatrix_eigenvalues.morpho diff --git a/test/methods/complexmatrix_enumerate.morpho b/newlinalg/test/methods/complexmatrix_enumerate.morpho similarity index 100% rename from test/methods/complexmatrix_enumerate.morpho rename to newlinalg/test/methods/complexmatrix_enumerate.morpho diff --git a/test/methods/complexmatrix_format.morpho b/newlinalg/test/methods/complexmatrix_format.morpho similarity index 100% rename from test/methods/complexmatrix_format.morpho rename to newlinalg/test/methods/complexmatrix_format.morpho diff --git a/test/methods/complexmatrix_imag.morpho b/newlinalg/test/methods/complexmatrix_imag.morpho similarity index 100% rename from test/methods/complexmatrix_imag.morpho rename to newlinalg/test/methods/complexmatrix_imag.morpho diff --git a/test/methods/complexmatrix_inner.morpho b/newlinalg/test/methods/complexmatrix_inner.morpho similarity index 100% rename from test/methods/complexmatrix_inner.morpho rename to newlinalg/test/methods/complexmatrix_inner.morpho diff --git a/test/methods/complexmatrix_inverse.morpho b/newlinalg/test/methods/complexmatrix_inverse.morpho similarity index 100% rename from test/methods/complexmatrix_inverse.morpho rename to newlinalg/test/methods/complexmatrix_inverse.morpho diff --git a/test/methods/complexmatrix_inverse_singular.morpho b/newlinalg/test/methods/complexmatrix_inverse_singular.morpho similarity index 100% rename from test/methods/complexmatrix_inverse_singular.morpho rename to newlinalg/test/methods/complexmatrix_inverse_singular.morpho diff --git a/test/methods/complexmatrix_norm.morpho b/newlinalg/test/methods/complexmatrix_norm.morpho similarity index 100% rename from test/methods/complexmatrix_norm.morpho rename to newlinalg/test/methods/complexmatrix_norm.morpho diff --git a/test/methods/complexmatrix_outer.morpho b/newlinalg/test/methods/complexmatrix_outer.morpho similarity index 100% rename from test/methods/complexmatrix_outer.morpho rename to newlinalg/test/methods/complexmatrix_outer.morpho diff --git a/test/methods/complexmatrix_qr.morpho b/newlinalg/test/methods/complexmatrix_qr.morpho similarity index 100% rename from test/methods/complexmatrix_qr.morpho rename to newlinalg/test/methods/complexmatrix_qr.morpho diff --git a/test/methods/complexmatrix_real.morpho b/newlinalg/test/methods/complexmatrix_real.morpho similarity index 100% rename from test/methods/complexmatrix_real.morpho rename to newlinalg/test/methods/complexmatrix_real.morpho diff --git a/test/methods/complexmatrix_reshape.morpho b/newlinalg/test/methods/complexmatrix_reshape.morpho similarity index 100% rename from test/methods/complexmatrix_reshape.morpho rename to newlinalg/test/methods/complexmatrix_reshape.morpho diff --git a/test/methods/complexmatrix_roll.morpho b/newlinalg/test/methods/complexmatrix_roll.morpho similarity index 100% rename from test/methods/complexmatrix_roll.morpho rename to newlinalg/test/methods/complexmatrix_roll.morpho diff --git a/test/methods/complexmatrix_roll_negative.morpho b/newlinalg/test/methods/complexmatrix_roll_negative.morpho similarity index 100% rename from test/methods/complexmatrix_roll_negative.morpho rename to newlinalg/test/methods/complexmatrix_roll_negative.morpho diff --git a/test/methods/complexmatrix_sum.morpho b/newlinalg/test/methods/complexmatrix_sum.morpho similarity index 100% rename from test/methods/complexmatrix_sum.morpho rename to newlinalg/test/methods/complexmatrix_sum.morpho diff --git a/test/methods/complexmatrix_svd.morpho b/newlinalg/test/methods/complexmatrix_svd.morpho similarity index 100% rename from test/methods/complexmatrix_svd.morpho rename to newlinalg/test/methods/complexmatrix_svd.morpho diff --git a/test/methods/complexmatrix_trace.morpho b/newlinalg/test/methods/complexmatrix_trace.morpho similarity index 100% rename from test/methods/complexmatrix_trace.morpho rename to newlinalg/test/methods/complexmatrix_trace.morpho diff --git a/test/methods/complexmatrix_transpose.morpho b/newlinalg/test/methods/complexmatrix_transpose.morpho similarity index 100% rename from test/methods/complexmatrix_transpose.morpho rename to newlinalg/test/methods/complexmatrix_transpose.morpho diff --git a/test/methods/matrix_count.morpho b/newlinalg/test/methods/matrix_count.morpho similarity index 100% rename from test/methods/matrix_count.morpho rename to newlinalg/test/methods/matrix_count.morpho diff --git a/test/methods/matrix_dimensions.morpho b/newlinalg/test/methods/matrix_dimensions.morpho similarity index 100% rename from test/methods/matrix_dimensions.morpho rename to newlinalg/test/methods/matrix_dimensions.morpho diff --git a/test/methods/matrix_eigensystem.morpho b/newlinalg/test/methods/matrix_eigensystem.morpho similarity index 100% rename from test/methods/matrix_eigensystem.morpho rename to newlinalg/test/methods/matrix_eigensystem.morpho diff --git a/test/methods/matrix_eigenvalues.morpho b/newlinalg/test/methods/matrix_eigenvalues.morpho similarity index 100% rename from test/methods/matrix_eigenvalues.morpho rename to newlinalg/test/methods/matrix_eigenvalues.morpho diff --git a/test/methods/matrix_enumerate.morpho b/newlinalg/test/methods/matrix_enumerate.morpho similarity index 100% rename from test/methods/matrix_enumerate.morpho rename to newlinalg/test/methods/matrix_enumerate.morpho diff --git a/test/methods/matrix_format.morpho b/newlinalg/test/methods/matrix_format.morpho similarity index 100% rename from test/methods/matrix_format.morpho rename to newlinalg/test/methods/matrix_format.morpho diff --git a/test/methods/matrix_inner.morpho b/newlinalg/test/methods/matrix_inner.morpho similarity index 100% rename from test/methods/matrix_inner.morpho rename to newlinalg/test/methods/matrix_inner.morpho diff --git a/test/methods/matrix_inverse.morpho b/newlinalg/test/methods/matrix_inverse.morpho similarity index 100% rename from test/methods/matrix_inverse.morpho rename to newlinalg/test/methods/matrix_inverse.morpho diff --git a/test/methods/matrix_inverse_singular.morpho b/newlinalg/test/methods/matrix_inverse_singular.morpho similarity index 100% rename from test/methods/matrix_inverse_singular.morpho rename to newlinalg/test/methods/matrix_inverse_singular.morpho diff --git a/test/methods/matrix_norm.morpho b/newlinalg/test/methods/matrix_norm.morpho similarity index 100% rename from test/methods/matrix_norm.morpho rename to newlinalg/test/methods/matrix_norm.morpho diff --git a/test/methods/matrix_outer.morpho b/newlinalg/test/methods/matrix_outer.morpho similarity index 100% rename from test/methods/matrix_outer.morpho rename to newlinalg/test/methods/matrix_outer.morpho diff --git a/test/methods/matrix_qr.morpho b/newlinalg/test/methods/matrix_qr.morpho similarity index 100% rename from test/methods/matrix_qr.morpho rename to newlinalg/test/methods/matrix_qr.morpho diff --git a/test/methods/matrix_reshape.morpho b/newlinalg/test/methods/matrix_reshape.morpho similarity index 100% rename from test/methods/matrix_reshape.morpho rename to newlinalg/test/methods/matrix_reshape.morpho diff --git a/test/methods/matrix_roll.morpho b/newlinalg/test/methods/matrix_roll.morpho similarity index 100% rename from test/methods/matrix_roll.morpho rename to newlinalg/test/methods/matrix_roll.morpho diff --git a/test/methods/matrix_sum.morpho b/newlinalg/test/methods/matrix_sum.morpho similarity index 100% rename from test/methods/matrix_sum.morpho rename to newlinalg/test/methods/matrix_sum.morpho diff --git a/test/methods/matrix_svd.morpho b/newlinalg/test/methods/matrix_svd.morpho similarity index 100% rename from test/methods/matrix_svd.morpho rename to newlinalg/test/methods/matrix_svd.morpho diff --git a/test/methods/matrix_trace.morpho b/newlinalg/test/methods/matrix_trace.morpho similarity index 100% rename from test/methods/matrix_trace.morpho rename to newlinalg/test/methods/matrix_trace.morpho diff --git a/test/methods/matrix_transpose.morpho b/newlinalg/test/methods/matrix_transpose.morpho similarity index 100% rename from test/methods/matrix_transpose.morpho rename to newlinalg/test/methods/matrix_transpose.morpho diff --git a/test/test.py b/newlinalg/test/test.py similarity index 100% rename from test/test.py rename to newlinalg/test/test.py From 21bd64220ca8e07fb76737179579b4067a059f18 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 12:42:25 -0500 Subject: [PATCH 094/156] Change xmatrix_ and xcomplexmatrix_ in newlinalg to correct filenames --- newlinalg/src/CMakeLists.txt | 4 ++-- newlinalg/src/{xcomplexmatrix.c => complexmatrix.c} | 6 +++--- newlinalg/src/{xcomplexmatrix.h => complexmatrix.h} | 6 +++--- newlinalg/src/{xmatrix.c => matrix.c} | 2 +- newlinalg/src/{xmatrix.h => matrix.h} | 6 +++--- newlinalg/src/newlinalg.h | 4 ++-- 6 files changed, 14 insertions(+), 14 deletions(-) rename newlinalg/src/{xcomplexmatrix.c => complexmatrix.c} (99%) rename newlinalg/src/{xcomplexmatrix.h => complexmatrix.h} (83%) rename newlinalg/src/{xmatrix.c => matrix.c} (99%) rename newlinalg/src/{xmatrix.h => matrix.h} (99%) diff --git a/newlinalg/src/CMakeLists.txt b/newlinalg/src/CMakeLists.txt index 9fd5edf2..e69c0c5c 100644 --- a/newlinalg/src/CMakeLists.txt +++ b/newlinalg/src/CMakeLists.txt @@ -1,6 +1,6 @@ target_sources(newlinalg PRIVATE newlinalg.c newlinalg.h - xmatrix.c xmatrix.h - xcomplexmatrix.c xcomplexmatrix.h + matrix.c matrix.h + complexmatrix.c complexmatrix.h ) \ No newline at end of file diff --git a/newlinalg/src/xcomplexmatrix.c b/newlinalg/src/complexmatrix.c similarity index 99% rename from newlinalg/src/xcomplexmatrix.c rename to newlinalg/src/complexmatrix.c index 3a860f77..5f85e8dc 100644 --- a/newlinalg/src/xcomplexmatrix.c +++ b/newlinalg/src/complexmatrix.c @@ -1,4 +1,4 @@ -/** @file xcomplexmatrix.c +/** @file complexmatrix.c * @author T J Atherton * * @brief New linear algebra library @@ -10,8 +10,8 @@ #include #include "newlinalg.h" -#include "xmatrix.h" -#include "xcomplexmatrix.h" +#include "matrix.h" +#include "complexmatrix.h" #include "format.h" #include "cmplx.h" diff --git a/newlinalg/src/xcomplexmatrix.h b/newlinalg/src/complexmatrix.h similarity index 83% rename from newlinalg/src/xcomplexmatrix.h rename to newlinalg/src/complexmatrix.h index a048eda9..cdb7bdd8 100644 --- a/newlinalg/src/xcomplexmatrix.h +++ b/newlinalg/src/complexmatrix.h @@ -1,11 +1,11 @@ -/** @file xcomplexmatrix.h +/** @file complexmatrix.h * @author T J Atherton * * @brief New linear algebra library */ -#ifndef xcomplexmatrix_h -#define xcomplexmatrix_h +#ifndef complexmatrix_h +#define complexmatrix_h /* ------------------------------------------------------- * ComplexMatrix veneer class diff --git a/newlinalg/src/xmatrix.c b/newlinalg/src/matrix.c similarity index 99% rename from newlinalg/src/xmatrix.c rename to newlinalg/src/matrix.c index b470ab7e..823f8726 100644 --- a/newlinalg/src/xmatrix.c +++ b/newlinalg/src/matrix.c @@ -1,4 +1,4 @@ -/** @file xmatrix.c +/** @file matrix.c * @author T J Atherton * * @brief New matrices diff --git a/newlinalg/src/xmatrix.h b/newlinalg/src/matrix.h similarity index 99% rename from newlinalg/src/xmatrix.h rename to newlinalg/src/matrix.h index dcac0931..b91b016f 100644 --- a/newlinalg/src/xmatrix.h +++ b/newlinalg/src/matrix.h @@ -1,11 +1,11 @@ -/** @file xmatrix.h +/** @file matrix.h * @author T J Atherton * * @brief New linear algebra library */ -#ifndef xmatrix_h -#define xmatrix_h +#ifndef matrix_h +#define matrix_h #define LINALG_MAXMATRIXDEFNS 4 diff --git a/newlinalg/src/newlinalg.h b/newlinalg/src/newlinalg.h index 70d3f237..c579c746 100644 --- a/newlinalg/src/newlinalg.h +++ b/newlinalg/src/newlinalg.h @@ -87,7 +87,7 @@ void linalg_raiseerror(vm *v, linalgError_t err); * Include the rest of the library * ------------------------------------------------------- */ -#include "xmatrix.h" -#include "xcomplexmatrix.h" +#include "matrix.h" +#include "complexmatrix.h" #endif From 2122542c6f39626f4c495e1a71609af44dcb873d Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 18:00:48 -0500 Subject: [PATCH 095/156] Update function and type names for xmatrix integration --- newlinalg/src/complexmatrix.c | 44 +++--- newlinalg/src/matrix.c | 288 +++++++++++++++++----------------- newlinalg/src/matrix.h | 90 +++++------ newlinalg/src/newlinalg.c | 2 +- 4 files changed, 212 insertions(+), 212 deletions(-) diff --git a/newlinalg/src/complexmatrix.c b/newlinalg/src/complexmatrix.c index 5f85e8dc..572df16b 100644 --- a/newlinalg/src/complexmatrix.c +++ b/newlinalg/src/complexmatrix.c @@ -57,8 +57,8 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { } /** Evaluate norms */ -static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { - char cnrm = xmatrix_normtolapack(nrm); +static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { + char cnrm = matrix_normtolapack(nrm); int nrows=a->nrows, ncols=a->ncols; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -167,7 +167,7 @@ static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { // Extract R (upper triangle of a) into r // Copy entire matrix first then zero out below the diagonal - xmatrix_copy(a, r); + matrix_copy(a, r); __LAPACK_double_complex *relems = (__LAPACK_double_complex *) r->elements; for (int j = 0; j < n && j < m - 1; j++) { memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(__LAPACK_double_complex)); @@ -221,7 +221,7 @@ matrixinterfacedefn complexmatrixdefn = { /** Create a new complex matrix */ objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { - return (objectcomplexmatrix *) xmatrix_newwithtype(OBJECT_COMPLEXMATRIX, nrows, ncols, 2, zero); + return (objectcomplexmatrix *) matrix_newwithtype(OBJECT_COMPLEXMATRIX, nrows, ncols, 2, zero); } /* ---------------------- @@ -281,7 +281,7 @@ linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxm } /** Scales a matrix x <- scale * x >*/ -void complexmatrix_scale(objectxmatrix *a, MorphoComplex scale) { +void complematrix_scale(objectxmatrix *a, MorphoComplex scale) { cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); } @@ -357,7 +357,7 @@ value complexmatrix_constructor__int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -value complexmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { +value complematrix_constructor__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); @@ -367,7 +367,7 @@ value complexmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { /** Constructs a complexmatrix from a list of lists or tuples */ value complexmatrix_constructor__list(vm *v, int nargs, value *args) { - objectxmatrix *new = xmatrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); + objectxmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); return morpho_wrapandbind(v, (object *) new); } @@ -376,7 +376,7 @@ value complexmatrix_constructor__array(vm *v, int nargs, value *args) { objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - objectxmatrix *new = xmatrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); + objectxmatrix *new = matrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); return morpho_wrapandbind(v, (object *) new); } @@ -398,7 +398,7 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); if (new) { complexmatrix_promote(b, new); - xmatrix_axpy(alpha, a, new); + matrix_axpy(alpha, a, new); } out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); @@ -411,7 +411,7 @@ value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { value ComplexMatrix_sub__xmatrix(vm *v, int nargs, value *args) { value out = _axpy(v, nargs, args, -1.0); - if (xmatrix_isamatrix(out)) xmatrix_scale(MORPHO_GETXMATRIX(out), -1.0); // -(-A + B) + if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETXMATRIX(out), -1.0); // -(-A + B) return out; } @@ -422,8 +422,8 @@ value ComplexMatrix_subr__xmatrix(vm *v, int nargs, value *args) { value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = xmatrix_clone(a); - if (new) complexmatrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); + objectxmatrix *new = matrix_clone(a); + if (new) complematrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); return morpho_wrapandbind(v, (object *) new); } @@ -464,14 +464,14 @@ value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { value ComplexMatrix_div__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; - objectxmatrix *new=xmatrix_clone(b); - if (new && _promote(v, A, &ap)) xmatrix_solve(ap, new); + objectxmatrix *new=matrix_clone(b); + if (new && _promote(v, A, &ap)) matrix_solve(ap, new); return morpho_wrapandbind(v, (object *) new); } value ComplexMatrix_divr__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *A=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; - if (_promote(v, b, &bp)) xmatrix_solve(A, bp); // Promote the matrix that will contain the solution anyway + if (_promote(v, b, &bp)) matrix_solve(A, bp); // Promote the matrix that will contain the solution anyway return morpho_wrapandbind(v, (object *) bp); } @@ -489,7 +489,7 @@ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; - objectcomplexmatrix *new = xmatrix_clone(a); + objectcomplexmatrix *new = matrix_clone(a); out = morpho_wrapandbind(v, (object *) new); if (new) LINALG_ERRCHECKVM(complexmatrix_inverse(new)); @@ -498,7 +498,7 @@ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { static value _realimag(vm *v, int nargs, value *args, bool imag) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=xmatrix_new(a->nrows, a->ncols, false); + objectxmatrix *new=matrix_new(a->nrows, a->ncols, false); if (new) complexmatrix_demote(a, new, imag); return morpho_wrapandbind(v, (object *) new); } @@ -515,9 +515,9 @@ value ComplexMatrix_imag(vm *v, int nargs, value *args) { static value _conj(vm *v, int nargs, value *args, bool trans) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=xmatrix_clone(a); + objectxmatrix *new=matrix_clone(a); if (new) { - if (trans) xmatrix_transpose(a, new); + if (trans) matrix_transpose(a, new); cblas_dscal(a->nrows*a->ncols, -1.0, new->elements+1, new->nvals); } return morpho_wrapandbind(v, (object *) new); @@ -631,7 +631,7 @@ MORPHO_ENDCLASS void complexmatrix_initialize(void) { objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); - xmatrix_addinterface(&complexmatrixdefn); + matrix_addinterface(&complexmatrixdefn); objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); @@ -641,8 +641,8 @@ void complexmatrix_initialize(void) { morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complexmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complematrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/newlinalg/src/matrix.c b/newlinalg/src/matrix.c index 823f8726..cae32415 100644 --- a/newlinalg/src/matrix.c +++ b/newlinalg/src/matrix.c @@ -18,21 +18,21 @@ static matrixinterfacedefn _matrixdefn[LINALG_MAXMATRIXDEFNS]; objecttype matrixinterfacedefnnext=0; /** Type of the next object definition */ -void xmatrix_addinterface(matrixinterfacedefn *defn) { +void matrix_addinterface(matrixinterfacedefn *defn) { if (matrixinterfacedefnnextobj.type-OBJECT_XMATRIX; if (iindxtype-OBJECT_XMATRIX; return iindx>=0 && iindxnels; } -void objectxmatrix_printfn(object *obj, void *v) { +void objectmatrix_printfn(object *obj, void *v) { objectclass *klass=object_getveneerclass(obj->type); morpho_printf(v, "<"); morpho_printvalue(v, klass->name); @@ -57,7 +57,7 @@ void objectxmatrix_printfn(object *obj, void *v) { } objecttypedefn objectxmatrixdefn = { - .printfn=objectxmatrix_printfn, + .printfn=objectmatrix_printfn, .markfn=NULL, .freefn=NULL, .sizefn=objectxmatrix_sizefn, @@ -91,8 +91,8 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { return LINALGERR_OK; } -/** Convert xmatrix_norm_t to a character for use with lapack routines */ -char xmatrix_normtolapack(xmatrix_norm_t norm) { +/** Convert matrix_norm_t to a character for use with lapack routines */ +char matrix_normtolapack(matrix_norm_t norm) { switch (norm) { case XMATRIX_NORM_MAX: return 'M'; case XMATRIX_NORM_L1: return '1'; @@ -103,8 +103,8 @@ char xmatrix_normtolapack(xmatrix_norm_t norm) { } /** Evaluate norms */ -static double _normfn(objectxmatrix *a, xmatrix_norm_t nrm) { - char cnrm = xmatrix_normtolapack(nrm); +static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { + char cnrm = matrix_normtolapack(nrm); int nrows=a->nrows, ncols=a->ncols; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -206,7 +206,7 @@ static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { // Extract R (upper triangle of a) into r // Copy entire matrix first, then zero out below the diagonal - xmatrix_copy(a, r); + matrix_copy(a, r); // Only process columns where there are rows below the diagonal (j < m - 1) for (int j = 0; j < n && j < m - 1; j++) { memset(&r->elements[j * m + (j + 1)], 0, (m - j - 1) * sizeof(double)); @@ -256,7 +256,7 @@ matrixinterfacedefn xmatrixdefn = { * ---------------------- */ /** Create a generic matrix with given type and layout */ -objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { +objectxmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { MatrixCount_t nels = nrows*ncols*nvals; objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), type); @@ -273,13 +273,13 @@ objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx } /** Create a new real matrix */ -objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { - return xmatrix_newwithtype(OBJECT_XMATRIX, nrows, ncols, 1, zero); +objectxmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return matrix_newwithtype(OBJECT_XMATRIX, nrows, ncols, 1, zero); } /** Clone a matrix */ -objectxmatrix *xmatrix_clone(objectxmatrix *in) { - objectxmatrix *new = xmatrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); +objectxmatrix *matrix_clone(objectxmatrix *in) { + objectxmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); return new; @@ -308,7 +308,7 @@ static bool _length(value v, int *len) { } /** Create a matrix from a list of lists (or tuples) */ -objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { +objectxmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { value iel, jel; int nrows=0, ncols=0, rlen; @@ -321,14 +321,14 @@ objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, Matrix } } - objectxmatrix *new=xmatrix_newwithtype(type, nrows, ncols, nvals, true); + objectxmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); if (!new) return NULL; for (int i=0; isetelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); + matrix_getinterface(new)->setelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); } } } @@ -337,11 +337,11 @@ objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, Matrix } /** Construct a matrix from an array */ -objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals) { +objectxmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals) { int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); - objectxmatrix *new=xmatrix_newwithtype(type, nrows, ncols, nvals, true); + objectxmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); if (!new) return NULL; for (int i=0; isetelfn(v, el, new->elements+(j*nrows + i)*new->nvals); + matrix_getinterface(new)->setelfn(v, el, new->elements+(j*nrows + i)*new->nvals); } } } @@ -362,7 +362,7 @@ objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, /** @brief Sets a matrix element. @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { +linalgError_t matrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; @@ -371,7 +371,7 @@ linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixI /** @brief Gets a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { +linalgError_t matrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; @@ -380,7 +380,7 @@ linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixI /** @brief Gets a pointer to a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { +linalgError_t matrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); @@ -388,7 +388,7 @@ linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, Matr } /** Copies the column col of matrix a into the column vector b */ -linalgError_t xmatrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { +linalgError_t matrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; @@ -397,7 +397,7 @@ linalgError_t xmatrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix } /** Copies the column vector b into column col of matrix a */ -linalgError_t xmatrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { +linalgError_t matrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; @@ -410,7 +410,7 @@ linalgError_t xmatrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix * ---------------------- */ /** Vector addition: Performs y <- alpha*x + y */ -linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); @@ -418,7 +418,7 @@ linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { } /** Copies a matrix y <- x */ -linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_copy(objectxmatrix *x, objectxmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); @@ -426,12 +426,12 @@ linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y) { } /** Scales a matrix x <- scale * x >*/ -void xmatrix_scale(objectxmatrix *x, double scale) { +void matrix_scale(objectxmatrix *x, double scale) { cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); } /** Loads the identity matrix a <- I(n) */ -linalgError_t xmatrix_identity(objectxmatrix *x) { +linalgError_t matrix_identity(objectxmatrix *x) { if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; @@ -439,7 +439,7 @@ linalgError_t xmatrix_identity(objectxmatrix *x) { } /** Performs z <- alpha*(x*y) + beta*z */ -linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { +linalgError_t matrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { if (!(x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols)) return LINALGERR_INCOMPATIBLE_DIM; cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); @@ -447,7 +447,7 @@ linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, dou } /** Performs x <- alpha*x + beta */ -linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta) { +linalgError_t matrix_addscalar(objectxmatrix *x, double alpha, double beta) { for (MatrixCount_t i=0; incols*x->nrows; i++) { for (int k=0; knvals; k++) { x->elements[i*x->nvals+k]*=alpha; @@ -458,7 +458,7 @@ linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta) { } /** Performs y <- x^T>*/ -linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_transpose(objectxmatrix *x, objectxmatrix *y) { if (!(x->ncols==y->nrows && x->nrows==y->ncols)) return LINALGERR_INCOMPATIBLE_DIM; for (MatrixCount_t i=0; incols; i++) { @@ -476,12 +476,12 @@ linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y) { * ---------------------- */ /** Computes various matrix norms */ -double xmatrix_norm(objectxmatrix *a, xmatrix_norm_t norm) { - return xmatrix_getinterface(a)->normfn(a, norm); +double matrix_norm(objectxmatrix *a, matrix_norm_t norm) { + return matrix_getinterface(a)->normfn(a, norm); } /** Computes the sum of all elements in a matrix */ -void xmatrix_sum(objectxmatrix *a, double *sum) { +void matrix_sum(objectxmatrix *a, double *sum) { double c[a->nvals], y, t; for (int i=0; invals; i++) { sum[i]=0; c[i]=0; } @@ -496,7 +496,7 @@ void xmatrix_sum(objectxmatrix *a, double *sum) { } /** Calculate the trace of a matrix */ -linalgError_t xmatrix_trace(objectxmatrix *a, double *out) { +linalgError_t matrix_trace(objectxmatrix *a, double *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; *out = 0.0; for (int i = 0; i < a->nrows; i++) { @@ -511,7 +511,7 @@ linalgError_t xmatrix_trace(objectxmatrix *a, double *out) { * ---------------------- */ /** Finds the Frobenius inner product of two matrices */ -linalgError_t xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { +linalgError_t matrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); @@ -519,7 +519,7 @@ linalgError_t xmatrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { } /** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ -linalgError_t xmatrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, objectxmatrix *c) { +linalgError_t matrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, objectxmatrix *c) { MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; @@ -528,21 +528,21 @@ linalgError_t xmatrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, } /** Solve the linear system a.x = b using stack allocated memory for temporary */ -linalgError_t xmatrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { +linalgError_t matrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { int pivot[a->nrows]; double els[a->nels]; objectxmatrix A = MORPHO_STATICXMATRIX(els, a->nrows, a->ncols); - xmatrix_copy(a, &A); - return (xmatrix_getinterface(a)->solvefn) (&A, b, pivot); + matrix_copy(a, &A); + return (matrix_getinterface(a)->solvefn) (&A, b, pivot); } /** Solve the linear system a.x = b using heap allocated memory for temporary */ -linalgError_t xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { +linalgError_t matrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); - objectxmatrix *A = xmatrix_clone(a); + objectxmatrix *A = matrix_clone(a); linalgError_t out = LINALGERR_ALLOC; if (pivot && A) { - out = (xmatrix_getinterface(a)->solvefn) (A, b, pivot); + out = (matrix_getinterface(a)->solvefn) (A, b, pivot); } if (A) object_free((object *) A); if (pivot) MORPHO_FREE(pivot); @@ -553,15 +553,15 @@ linalgError_t xmatrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { * @param[in] a lhs * @param[in|out] b rhs — overwritten by the solution * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b) { - if (MATRIX_ISSMALL(a)) return xmatrix_solvesmall(a, b); - else return xmatrix_solvelarge(a, b); +linalgError_t matrix_solve(objectxmatrix *a, objectxmatrix *b) { + if (MATRIX_ISSMALL(a)) return matrix_solvesmall(a, b); + else return matrix_solvelarge(a, b); } /** Inverts the matrix a * @param[in] a matrix to be inverted * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t xmatrix_inverse(objectxmatrix *a) { +linalgError_t matrix_inverse(objectxmatrix *a) { int nrows=a->nrows, ncols=a->ncols, info; int pivot[nrows]; @@ -583,14 +583,14 @@ linalgError_t xmatrix_inverse(objectxmatrix *a) { } /** Interface to eigensystem */ -linalgError_t xmatrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { +linalgError_t matrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - xmatrix_eigenfn_t efn = xmatrix_getinterface(a)->eigenfn; + matrix_eigenfn_t efn = matrix_getinterface(a)->eigenfn; if (!efn) return LINALGERR_NOT_SUPPORTED; - objectxmatrix *temp = xmatrix_clone(a); + objectxmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; return efn(temp, w, vec); @@ -601,13 +601,13 @@ linalgError_t xmatrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v * ---------------------- */ /** Prints a matrix */ -void xmatrix_print(vm *v, objectxmatrix *m) { - matrixinterfacedefn *interface=xmatrix_getinterface(m); +void matrix_print(vm *v, objectxmatrix *m) { + matrixinterfacedefn *interface=matrix_getinterface(m); double *elptr; for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m morpho_printf(v, "[ "); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - xmatrix_getelementptr(m, i, j, &elptr); + matrix_getelementptr(m, i, j, &elptr); (*interface->printelfn) (v, elptr); morpho_printf(v, " "); } @@ -616,14 +616,14 @@ void xmatrix_print(vm *v, objectxmatrix *m) { } /** Prints a matrix to a buffer */ -bool xmatrix_printtobuffer(objectxmatrix *m, char *format, varray_char *out) { - matrixinterfacedefn *interface=xmatrix_getinterface(m); +bool matrix_printtobuffer(objectxmatrix *m, char *format, varray_char *out) { + matrixinterfacedefn *interface=matrix_getinterface(m); double *elptr; for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m varray_charadd(out, "[ ", 2); for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - xmatrix_getelementptr(m, i, j, &elptr); + matrix_getelementptr(m, i, j, &elptr); if (!(*interface->printeltobufffn) (out, format, elptr)) return false; varray_charadd(out, " ", 1); } @@ -660,7 +660,7 @@ static void _copyrow(objectxmatrix *a, MatrixIdx_t arow, objectxmatrix *b, Matri } /** Rolls a list by a number of elements along a given axis; stores the result in b */ -linalgError_t xmatrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatrix *b) { +linalgError_t matrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatrix *b) { if (!(a->nrows==b->nrows && a->ncols==b->ncols && a->nvals==b->nvals)) return LINALGERR_INCOMPATIBLE_DIM; switch(axis) { @@ -682,53 +682,53 @@ linalgError_t xmatrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatri * XMatrix constructors * ********************************************************************** */ -value xmatrix_constructor__int_int(vm *v, int nargs, value *args) { +value matrix_constructor__int_int(vm *v, int nargs, value *args) { MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - objectxmatrix *new=xmatrix_new(nrows, ncols, true); + objectxmatrix *new=matrix_new(nrows, ncols, true); return morpho_wrapandbind(v, (object *) new); } -value xmatrix_constructor__int(vm *v, int nargs, value *args) { +value matrix_constructor__int(vm *v, int nargs, value *args) { MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - objectxmatrix *new=xmatrix_new(nrows, 1, true); + objectxmatrix *new=matrix_new(nrows, 1, true); return morpho_wrapandbind(v, (object *) new); } /** Clones a matrix */ -value xmatrix_constructor__xmatrix(vm *v, int nargs, value *args) { +value matrix_constructor__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - return morpho_wrapandbind(v, (object *) xmatrix_clone(a)); + return morpho_wrapandbind(v, (object *) matrix_clone(a)); } /** Constructs a matrix from a list of lists or tuples */ -value xmatrix_constructor__list(vm *v, int nargs, value *args) { - objectxmatrix *new = xmatrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_XMATRIX, 1); +value matrix_constructor__list(vm *v, int nargs, value *args) { + objectxmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_XMATRIX, 1); return morpho_wrapandbind(v, (object *) new); } /** Constructs a matrix from an array */ -value xmatrix_constructor__array(vm *v, int nargs, value *args) { +value matrix_constructor__array(vm *v, int nargs, value *args) { objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - objectxmatrix *new = xmatrix_arrayconstructor(v, a, OBJECT_XMATRIX, 1); + objectxmatrix *new = matrix_arrayconstructor(v, a, OBJECT_XMATRIX, 1); return morpho_wrapandbind(v, (object *) new); } -value xmatrix_constructor__err(vm *v, int nargs, value *args) { +value matrix_constructor__err(vm *v, int nargs, value *args) { morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; } /** Creates an identity matrix */ -value xmatrix_identityconstructor(vm *v, int nargs, value *args) { +value matrix_identityconstructor(vm *v, int nargs, value *args) { MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - objectxmatrix *new = xmatrix_new(n,n,false); - if (new) xmatrix_identity(new); + objectxmatrix *new = matrix_new(n,n,false); + if (new) matrix_identity(new); return morpho_wrapandbind(v, (object *) new); } @@ -744,7 +744,7 @@ value xmatrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value XMatrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - xmatrix_print(v, m); + matrix_print(v, m); return MORPHO_NIL; } @@ -754,7 +754,7 @@ value XMatrix_format(vm *v, int nargs, value *args) { varray_char str; varray_charinit(&str); - if (xmatrix_printtobuffer(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + if (matrix_printtobuffer(MORPHO_GETXMATRIX(MORPHO_SELF(args)), MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), &str)) { out = object_stringfromvarraychar(&str); @@ -769,14 +769,14 @@ value XMatrix_format(vm *v, int nargs, value *args) { value XMatrix_assign(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - LINALG_ERRCHECKVM(xmatrix_copy(b, a)); + LINALG_ERRCHECKVM(matrix_copy(b, a)); return MORPHO_NIL; } /** Clones a matrix */ value XMatrix_clone(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=xmatrix_clone(a); + objectxmatrix *new=matrix_clone(a); return morpho_wrapandbind(v, (object *) new); } @@ -791,9 +791,9 @@ value XMatrix_index__int_int(vm *v, int nargs, value *args) { value out=MORPHO_NIL; double *elptr=NULL; - LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); + LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); - if (elptr) out=xmatrix_getinterface(m)->getelfn(v, elptr); + if (elptr) out=matrix_getinterface(m)->getelfn(v, elptr); return out; } @@ -827,8 +827,8 @@ static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx for (MatrixIdx_t i=0; invals); else memcpy(bel, ael, sizeof(double)*b->nvals); } @@ -844,7 +844,7 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); - new=xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); + new=matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } linalgError_t err=_slice_copy(iv, jv, icnt, jcnt, m, new, false); @@ -860,8 +860,8 @@ value XMatrix_index__x_x(vm *v, int nargs, value *args) { static void _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { double *elptr=NULL; - LINALG_ERRCHECKVM(xmatrix_getelementptr(m, i, j, &elptr)); - if (elptr) LINALG_ERRCHECKVM(xmatrix_getinterface(m)->setelfn(v, in, elptr)); + LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); + if (elptr) LINALG_ERRCHECKVM(matrix_getinterface(m)->setelfn(v, in, elptr)); } value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { @@ -900,8 +900,8 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { value out=MORPHO_NIL; if (i>=0 && incols) { - objectxmatrix *new=xmatrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); - if (new) xmatrix_getcolumn(a, i, new); + objectxmatrix *new=matrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); + if (new) matrix_getcolumn(a, i, new); out=morpho_wrapandbind(v, (object *)new); } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); @@ -909,7 +909,7 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { } value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { - LINALG_ERRCHECKVM(xmatrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); return MORPHO_NIL; @@ -927,8 +927,8 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { value out=MORPHO_NIL; if (a->ncols==b->ncols && a->nrows==b->nrows) { - new=xmatrix_clone(a); - if (new) LINALG_ERRCHECKVM(xmatrix_axpy(alpha, b, new)); + new=matrix_clone(a); + if (new) LINALG_ERRCHECKVM(matrix_axpy(alpha, b, new)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); @@ -943,8 +943,8 @@ static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { double beta; if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &beta)) { - new = xmatrix_clone(a); - if (new) LINALG_ERRCHECKVM(xmatrix_addscalar(new, sgna, beta*sgnb)); + new = matrix_clone(a); + if (new) LINALG_ERRCHECKVM(matrix_addscalar(new, sgna, beta*sgnb)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INVLDARGS); @@ -960,7 +960,7 @@ value XMatrix_add__nil(vm *v, int nargs, value *args) { } value XMatrix_add__x(vm *v, int nargs, value *args) { - if (xmatrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr + if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr return _xpa(v,nargs,args,1.0,1.0); } @@ -969,7 +969,7 @@ value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { } value XMatrix_sub__x(vm *v, int nargs, value *args) { - if (xmatrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr + if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr return _xpa(v,nargs,args,1.0,-1.0); } @@ -983,8 +983,8 @@ value XMatrix_mul__float(vm *v, int nargs, value *args) { double scale; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; - objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_scale(new, scale); + objectxmatrix *new = matrix_clone(a); + if (new) matrix_scale(new, scale); return morpho_wrapandbind(v, (object *) new); } @@ -994,8 +994,8 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { value out=MORPHO_NIL; if (a->ncols==b->nrows) { - objectxmatrix *new = xmatrix_new(a->nrows, b->ncols, false); - if (new) LINALG_ERRCHECKVM(xmatrix_mmul(1.0, a, b, 0.0, new)); + objectxmatrix *new = matrix_new(a->nrows, b->ncols, false); + if (new) LINALG_ERRCHECKVM(matrix_mmul(1.0, a, b, 0.0, new)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; @@ -1009,8 +1009,8 @@ value XMatrix_div__float(vm *v, int nargs, value *args) { scale = 1.0/scale; if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); - objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_scale(new, scale); + objectxmatrix *new = matrix_clone(a); + if (new) matrix_scale(new, scale); return morpho_wrapandbind(v, (object *) new); } @@ -1018,8 +1018,8 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument - objectxmatrix *sol = xmatrix_clone(b); - if (sol) LINALG_ERRCHECKVM(xmatrix_solve(a, sol)); + objectxmatrix *sol = matrix_clone(b); + if (sol) LINALG_ERRCHECKVM(matrix_solve(a, sol)); return morpho_wrapandbind(v, (object *) sol); } @@ -1032,7 +1032,7 @@ value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { double alpha=1.0; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } - LINALG_ERRCHECKVM(xmatrix_axpy(alpha, b, a)); + LINALG_ERRCHECKVM(matrix_axpy(alpha, b, a)); return MORPHO_NIL; } @@ -1047,9 +1047,9 @@ value XMatrix_norm__x(vm *v, int nargs, value *args) { if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { if (fabs(n-1.0)nvals]; - xmatrix_sum(a, sum); - return xmatrix_getinterface(a)->getelfn(v, sum); + matrix_sum(a, sum); + return matrix_getinterface(a)->getelfn(v, sum); } /** Computes the trace */ value XMatrix_trace(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); double out=0.0; - LINALG_ERRCHECKVM(xmatrix_trace(a, &out)); + LINALG_ERRCHECKVM(matrix_trace(a, &out)); return MORPHO_FLOAT(out); } /** Inverts a matrix */ value XMatrix_transpose(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = xmatrix_clone(a); + objectxmatrix *new = matrix_clone(a); if (new) { new->ncols=a->nrows; new->nrows=a->ncols; - LINALG_ERRCHECKVM(xmatrix_transpose(a, new)); + LINALG_ERRCHECKVM(matrix_transpose(a, new)); } return morpho_wrapandbind(v, (object *) new); } @@ -1094,8 +1094,8 @@ value XMatrix_transpose(vm *v, int nargs, value *args) { /** Inverts a matrix */ value XMatrix_inverse(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = xmatrix_clone(a); - if (new) LINALG_ERRCHECKVM(xmatrix_inverse(new)); + objectxmatrix *new = matrix_clone(a); + if (new) LINALG_ERRCHECKVM(matrix_inverse(new)); return morpho_wrapandbind(v, (object *) new); } @@ -1135,7 +1135,7 @@ value XMatrix_eigenvalues(vm *v, int nargs, value *args) { MatrixIdx_t n=a->ncols; MorphoComplex w[n]; - linalgError_t err=xmatrix_eigen(a, w, NULL); + linalgError_t err=matrix_eigen(a, w, NULL); if (err==LINALGERR_OK) { if (_processeigenvalues(v, n, w, &out)) { morpho_bindobjects(v, 1, &out); @@ -1158,10 +1158,10 @@ value XMatrix_eigensystem(vm *v, int nargs, value *args) { MatrixIdx_t n=a->ncols; MorphoComplex w[n]; - evec=xmatrix_clone(a); + evec=matrix_clone(a); _CHK(evec); - linalgError_t err=xmatrix_eigen(a, w, evec); + linalgError_t err=matrix_eigen(a, w, evec); if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto _eigensystem_cleanup; } _CHK(_processeigenvalues(v, n, w, &ev)); @@ -1191,14 +1191,14 @@ value XMatrix_eigensystem(vm *v, int nargs, value *args) { * ---------------- */ /** Interface to SVD */ -linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { +linalgError_t matrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { if (u && ((a->nrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; if (vt && ((a->ncols != vt->nrows) || (a->ncols != vt->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - objectxmatrix *temp = xmatrix_clone(a); + objectxmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; - linalgError_t err = xmatrix_getinterface(a)->svdfn (temp, s, u, vt); + linalgError_t err = matrix_getinterface(a)->svdfn (temp, s, u, vt); object_free((object *) temp); return err; } @@ -1208,14 +1208,14 @@ linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx * ---------------- */ /** Interface to QR decomposition */ -linalgError_t xmatrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { +linalgError_t matrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { if (q && ((a->nrows != q->nrows) || (a->nrows != q->ncols))) return LINALGERR_INCOMPATIBLE_DIM; if (r && ((a->nrows != r->nrows) || (a->ncols != r->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - objectxmatrix *temp = xmatrix_clone(a); + objectxmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; - linalgError_t err = xmatrix_getinterface(a)->qrfn (temp, q, r); + linalgError_t err = matrix_getinterface(a)->qrfn (temp, q, r); object_free((object *) temp); return err; } @@ -1247,13 +1247,13 @@ value XMatrix_svd(vm *v, int nargs, value *args) { double singular_values[minmn]; // Allocate U (m×m) and VT (n×n) matrices - u = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); + u = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); _CHK_SVD(u); - vt = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), n, n, a->nvals, false); + vt = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), n, n, a->nvals, false); _CHK_SVD(vt); - linalgError_t err = xmatrix_svd(a, singular_values, u, vt); + linalgError_t err = matrix_svd(a, singular_values, u, vt); if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _svd_cleanup; } _CHK_SVD(_processsingularvalues(v, minmn, singular_values, &s)); @@ -1290,13 +1290,13 @@ value XMatrix_qr(vm *v, int nargs, value *args) { MatrixIdx_t m = a->nrows, n = a->ncols; // Allocate Q (m×m) and R (m×n) matrices - q = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); + q = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); _CHK_QR(q); - r = xmatrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, n, a->nvals, false); + r = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, n, a->nvals, false); _CHK_QR(r); - linalgError_t err = xmatrix_qr(a, q, r); + linalgError_t err = matrix_qr(a, q, r); if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _qr_cleanup; } value outtuple[2] = { MORPHO_OBJECT(q), MORPHO_OBJECT(r) }; @@ -1324,7 +1324,7 @@ value XMatrix_inner(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); double prod=0.0; - LINALG_ERRCHECKVM(xmatrix_inner(a, b, &prod)); + LINALG_ERRCHECKVM(matrix_inner(a, b, &prod)); return MORPHO_FLOAT(prod); } @@ -1334,8 +1334,8 @@ value XMatrix_outer(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); - objectxmatrix *new=xmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); - if (new) LINALG_ERRCHECKVM(xmatrix_r1update(1.0, a, b, new)); + objectxmatrix *new=matrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + if (new) LINALG_ERRCHECKVM(matrix_r1update(1.0, a, b, new)); return morpho_wrapandbind(v, (object *) new); } @@ -1359,8 +1359,8 @@ value XMatrix_reshape(vm *v, int nargs, value *args) { } static value _roll(vm *v, objectxmatrix *a, int roll, int axis) { - objectxmatrix *new = xmatrix_clone(a); - if (new) xmatrix_roll(a, roll, axis, new); + objectxmatrix *new = matrix_clone(a); + if (new) matrix_roll(a, roll, axis, new); return morpho_wrapandbind(v, (object *) new); } @@ -1388,7 +1388,7 @@ value XMatrix_enumerate(vm *v, int nargs, value *args) { if (i<0) { out=MORPHO_INTEGER(a->ncols*a->nrows); } else if (incols*a->nrows) { - out=xmatrix_getinterface(a)->getelfn(v, a->elements+i*a->nvals); + out=matrix_getinterface(a)->getelfn(v, a->elements+i*a->nvals); } else { linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); } @@ -1464,9 +1464,9 @@ MORPHO_ENDCLASS * Initialization * ********************************************************************** */ -void xmatrix_initialize(void) { +void matrix_initialize(void) { objectxmatrixtype=object_addtype(&objectxmatrixdefn); - xmatrix_addinterface(&xmatrixdefn); + matrix_addinterface(&xmatrixdefn); objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); @@ -1474,15 +1474,15 @@ void xmatrix_initialize(void) { value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), objclass); object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", xmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int)", xmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (XMatrix)", xmatrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Tuple)", xmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Array)", xmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "(...)", xmatrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (XMatrix)", matrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", xmatrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(XMATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); - complexmatrix_initialize(); + complematrix_initialize(); } diff --git a/newlinalg/src/matrix.h b/newlinalg/src/matrix.h index b91b016f..4ceb4c65 100644 --- a/newlinalg/src/matrix.h +++ b/newlinalg/src/matrix.h @@ -56,47 +56,47 @@ typedef struct { * ------------------------------------------------------- */ /** Function that prints a single matrix element */ -typedef void (*xmatrix_printelfn_t) (vm *, double *); +typedef void (*matrix_printelfn_t) (vm *, double *); /** Function that prints a single matrix element to a text buffer * @param[in] out - buffer to write to * @param[in] format - format string * @param[in] el - pointer to matrix element data * @returns true on success */ -typedef bool (*xmatrix_printeltobufffn_t) (varray_char *out, char *format, double *el); +typedef bool (*matrix_printeltobufffn_t) (varray_char *out, char *format, double *el); /** Function that materializes a value from a pointer to an element */ -typedef value (*xmatrix_getelfn_t) (vm *, double *); +typedef value (*matrix_getelfn_t) (vm *, double *); /** Function that sets the an element given a value */ -typedef linalgError_t (*xmatrix_setelfn_t) (vm *, value, double *); +typedef linalgError_t (*matrix_setelfn_t) (vm *, value, double *); typedef enum { XMATRIX_NORM_MAX, XMATRIX_NORM_L1, XMATRIX_NORM_INF, XMATRIX_NORM_FROBENIUS, -} xmatrix_norm_t; +} matrix_norm_t; -/** Convert xmatrix_norm_t to a character for use with lapack routines */ -char xmatrix_normtolapack(xmatrix_norm_t norm); +/** Convert matrix_norm_t to a character for use with lapack routines */ +char matrix_normtolapack(matrix_norm_t norm); /** Compute various matrix norms */ -typedef double (*xmatrix_normfn_t) (objectxmatrix *a, xmatrix_norm_t nrm); +typedef double (*matrix_normfn_t) (objectxmatrix *a, matrix_norm_t nrm); /** Function that solves the linear system a.x = b * @param[in|out] a - lhs; overwritten by LU decomposition * @param[in|out] b - rhs; overwritten by solution * @param[out] pivot - you must provide an array with the same number of rows as a. * @returns a matrix error code */ -typedef linalgError_t (*xmatrix_solvefn_t) (objectxmatrix *a, objectxmatrix *b, int *pivot); +typedef linalgError_t (*matrix_solvefn_t) (objectxmatrix *a, objectxmatrix *b, int *pivot); /** Function that finds the eigenvalues of a matrix * @param[in|out] a - matrix to diagonalize; overwritten * @param[out] w - eigenvalues; dimension N * @param[out] vec - right eigenvectors. Can be NULL if only eigenvalues requested * @returns a matrix error code */ -typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec); +typedef linalgError_t (*matrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec); /** Function that finds the svd of a matrix * @param[in|out] a - overwritten @@ -104,29 +104,29 @@ typedef linalgError_t (*xmatrix_eigenfn_t) (objectxmatrix *a, MorphoComplex *w, * @param[out] u - left singular vectors * @param[out] v - right singular vectors (transposed so columns contain singular vectors) * @returns a matrix error code */ -typedef linalgError_t (*xmatrix_svdfn_t) (objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); +typedef linalgError_t (*matrix_svdfn_t) (objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); /** Function that finds the QR decomposition of a matrix * @param[in|out] a - overwritten with R in upper triangle and reflectors below * @param[out] q - orthogonal matrix Q * @param[out] r - upper triangular matrix R * @returns a matrix error code */ -typedef linalgError_t (*xmatrix_qrfn_t) (objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); +typedef linalgError_t (*matrix_qrfn_t) (objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); typedef struct { - xmatrix_printelfn_t printelfn; - xmatrix_printeltobufffn_t printeltobufffn; - xmatrix_getelfn_t getelfn; - xmatrix_setelfn_t setelfn; - xmatrix_normfn_t normfn; - xmatrix_solvefn_t solvefn; - xmatrix_eigenfn_t eigenfn; - xmatrix_svdfn_t svdfn; - xmatrix_qrfn_t qrfn; + matrix_printelfn_t printelfn; + matrix_printeltobufffn_t printeltobufffn; + matrix_getelfn_t getelfn; + matrix_setelfn_t setelfn; + matrix_normfn_t normfn; + matrix_solvefn_t solvefn; + matrix_eigenfn_t eigenfn; + matrix_svdfn_t svdfn; + matrix_qrfn_t qrfn; } matrixinterfacedefn; -void xmatrix_addinterface(matrixinterfacedefn *defn); -matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); +void matrix_addinterface(matrixinterfacedefn *defn); +matrixinterfacedefn *matrix_getinterface(objectxmatrix *a); /* ------------------------------------------------------- * Matrix veneer class @@ -152,11 +152,11 @@ matrixinterfacedefn *xmatrix_getinterface(objectxmatrix *a); #define XMATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" -void xmatrix_initialize(void); +void matrix_initialize(void); #define IMPLEMENTATIONFN(fn) value fn (vm *v, int nargs, value *args) -IMPLEMENTATIONFN(xmatrix_constructor__xmatrix); +IMPLEMENTATIONFN(matrix_constructor__xmatrix); IMPLEMENTATIONFN(XMatrix_print); IMPLEMENTATIONFN(XMatrix_format); @@ -205,32 +205,32 @@ IMPLEMENTATIONFN(XMatrix_dimensions); * Interface * ------------------------------------------------------- */ -bool xmatrix_isamatrix(value val); +bool matrix_isamatrix(value val); -objectxmatrix *xmatrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); -objectxmatrix *xmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero); -objectxmatrix *xmatrix_clone(objectxmatrix *in); -objectxmatrix *xmatrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); -objectxmatrix *xmatrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); +objectxmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero); +objectxmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero); +objectxmatrix *matrix_clone(objectxmatrix *in); +objectxmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); +objectxmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); -linalgError_t xmatrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y); -linalgError_t xmatrix_copy(objectxmatrix *x, objectxmatrix *y); -void xmatrix_scale(objectxmatrix *x, double scale); -linalgError_t xmatrix_identity(objectxmatrix *x); -linalgError_t xmatrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z); -linalgError_t xmatrix_addscalar(objectxmatrix *x, double alpha, double beta); -linalgError_t xmatrix_transpose(objectxmatrix *x, objectxmatrix *y); +linalgError_t matrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y); +linalgError_t matrix_copy(objectxmatrix *x, objectxmatrix *y); +void matrix_scale(objectxmatrix *x, double scale); +linalgError_t matrix_identity(objectxmatrix *x); +linalgError_t matrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z); +linalgError_t matrix_addscalar(objectxmatrix *x, double alpha, double beta); +linalgError_t matrix_transpose(objectxmatrix *x, objectxmatrix *y); -linalgError_t xmatrix_solve(objectxmatrix *a, objectxmatrix *b); +linalgError_t matrix_solve(objectxmatrix *a, objectxmatrix *b); -linalgError_t xmatrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); +linalgError_t matrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt); -linalgError_t xmatrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); +linalgError_t matrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r); -linalgError_t xmatrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); -linalgError_t xmatrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); -linalgError_t xmatrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); +linalgError_t matrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); +linalgError_t matrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); +linalgError_t matrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); -void xmatrix_print(vm *v, objectxmatrix *m); +void matrix_print(vm *v, objectxmatrix *m); #endif diff --git a/newlinalg/src/newlinalg.c b/newlinalg/src/newlinalg.c index 4caadffb..81beb96b 100644 --- a/newlinalg/src/newlinalg.c +++ b/newlinalg/src/newlinalg.c @@ -34,7 +34,7 @@ void linalg_raiseerror(vm *v, linalgError_t err) { * ------------------------------------------------------- */ void newlinalg_initialize(void) { - xmatrix_initialize(); + matrix_initialize(); morpho_defineerror(LINALG_INCOMPATIBLEMATRICES, ERROR_HALT, LINALG_INCOMPATIBLEMATRICES_MSG); morpho_defineerror(LINALG_INDICESOUTSIDEBOUNDS, ERROR_HALT, LINALG_INDICESOUTSIDEBOUNDS_MSG); From 1523bd927402d1e98606ec598a82d1b96ef70c6e Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 18:14:12 -0500 Subject: [PATCH 096/156] Update macros and method implementations --- newlinalg/src/complexmatrix.c | 124 ++++++++++----------- newlinalg/src/matrix.c | 204 +++++++++++++++++----------------- newlinalg/src/matrix.h | 130 +++++++++++----------- 3 files changed, 229 insertions(+), 229 deletions(-) diff --git a/newlinalg/src/complexmatrix.c b/newlinalg/src/complexmatrix.c index 572df16b..ecb8a455 100644 --- a/newlinalg/src/complexmatrix.c +++ b/newlinalg/src/complexmatrix.c @@ -357,7 +357,7 @@ value complexmatrix_constructor__int(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -value complematrix_constructor__xmatrix(vm *v, int nargs, value *args) { +value complematrix_constructor__matrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); @@ -405,17 +405,17 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { return out; } -value ComplexMatrix_add__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_add__matrix(vm *v, int nargs, value *args) { return _axpy(v, nargs, args, 1.0); } -value ComplexMatrix_sub__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_sub__matrix(vm *v, int nargs, value *args) { value out = _axpy(v, nargs, args, -1.0); if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETXMATRIX(out), -1.0); // -(-A + B) return out; } -value ComplexMatrix_subr__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_subr__matrix(vm *v, int nargs, value *args) { return _axpy(v, nargs, args, -1.0); } @@ -454,22 +454,22 @@ value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), false, false); } -value ComplexMatrix_mul__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_mul__matrix(vm *v, int nargs, value *args) { return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, false); } -value ComplexMatrix_mulr__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_mulr__matrix(vm *v, int nargs, value *args) { return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, true); } -value ComplexMatrix_div__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_div__matrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; objectxmatrix *new=matrix_clone(b); if (new && _promote(v, A, &ap)) matrix_solve(ap, new); return morpho_wrapandbind(v, (object *) new); } -value ComplexMatrix_divr__xmatrix(vm *v, int nargs, value *args) { +value ComplexMatrix_divr__matrix(vm *v, int nargs, value *args) { objectxmatrix *A=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; if (_promote(v, b, &bp)) matrix_solve(A, bp); // Promote the matrix that will contain the solution anyway return morpho_wrapandbind(v, (object *) bp); @@ -564,65 +564,65 @@ value ComplexMatrix_outer(vm *v, int nargs, value *args) { } MORPHO_BEGINCLASS(ComplexMatrix) -MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", XMatrix_index__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", XMatrix_index__x_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", XMatrix_setindex__x_x_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_subr__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index_x_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mulr__xmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_divr__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", XMatrix_sum, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", Matrix_sum, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "XMatrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "XMatrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_QR_METHOD, "Tuple ()", XMatrix_qr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** @@ -641,8 +641,8 @@ void complexmatrix_initialize(void) { morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complematrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complematrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/newlinalg/src/matrix.c b/newlinalg/src/matrix.c index cae32415..3c6cb68c 100644 --- a/newlinalg/src/matrix.c +++ b/newlinalg/src/matrix.c @@ -94,10 +94,10 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { /** Convert matrix_norm_t to a character for use with lapack routines */ char matrix_normtolapack(matrix_norm_t norm) { switch (norm) { - case XMATRIX_NORM_MAX: return 'M'; - case XMATRIX_NORM_L1: return '1'; - case XMATRIX_NORM_INF: return 'I'; - case XMATRIX_NORM_FROBENIUS: return 'F'; + case MATRIX_NORM_MAX: return 'M'; + case MATRIX_NORM_L1: return '1'; + case MATRIX_NORM_INF: return 'I'; + case MATRIX_NORM_FROBENIUS: return 'F'; } return '\0'; } @@ -698,7 +698,7 @@ value matrix_constructor__int(vm *v, int nargs, value *args) { } /** Clones a matrix */ -value matrix_constructor__xmatrix(vm *v, int nargs, value *args) { +value matrix_constructor__matrix(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); return morpho_wrapandbind(v, (object *) matrix_clone(a)); } @@ -742,14 +742,14 @@ value matrix_identityconstructor(vm *v, int nargs, value *args) { * ---------------------- */ /** Prints a matrix */ -value XMatrix_print(vm *v, int nargs, value *args) { +value Matrix_print(vm *v, int nargs, value *args) { objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); matrix_print(v, m); return MORPHO_NIL; } /** Formatted conversion to a string */ -value XMatrix_format(vm *v, int nargs, value *args) { +value Matrix_format(vm *v, int nargs, value *args) { value out=MORPHO_NIL; varray_char str; varray_charinit(&str); @@ -766,7 +766,7 @@ value XMatrix_format(vm *v, int nargs, value *args) { } /** Copies the contents of one matrix into another */ -value XMatrix_assign(vm *v, int nargs, value *args) { +value Matrix_assign(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); LINALG_ERRCHECKVM(matrix_copy(b, a)); @@ -774,7 +774,7 @@ value XMatrix_assign(vm *v, int nargs, value *args) { } /** Clones a matrix */ -value XMatrix_clone(vm *v, int nargs, value *args) { +value Matrix_clone(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *new=matrix_clone(a); return morpho_wrapandbind(v, (object *) new); @@ -784,7 +784,7 @@ value XMatrix_clone(vm *v, int nargs, value *args) { * index() * --------- */ -value XMatrix_index__int_int(vm *v, int nargs, value *args) { +value Matrix_index_int_int(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -836,7 +836,7 @@ static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx return LINALGERR_OK; } -value XMatrix_index__x_x(vm *v, int nargs, value *args) { +value Matrix_index_x_x(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)), *new=NULL; value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); value out=MORPHO_NIL; @@ -864,20 +864,20 @@ static void _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, val if (elptr) LINALG_ERRCHECKVM(matrix_getinterface(m)->setelfn(v, in, elptr)); } -value XMatrix_setindex__int_x(vm *v, int nargs, value *args) { +value Matrix_setindex_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); return MORPHO_NIL; } -value XMatrix_setindex__int_int_x(vm *v, int nargs, value *args) { +value Matrix_setindex_int_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); return MORPHO_NIL; } -value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { +value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *msrc = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 2)); value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); @@ -894,7 +894,7 @@ value XMatrix_setindex__x_x_xmatrix(vm *v, int nargs, value *args) { * column * --------- */ -value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { +value Matrix_getcolumn_int(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -908,7 +908,7 @@ value XMatrix_getcolumn__int(vm *v, int nargs, value *args) { return out; } -value XMatrix_setcolumn__int_xmatrix(vm *v, int nargs, value *args) { +value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); @@ -951,33 +951,33 @@ static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { return out; } -value XMatrix_add__xmatrix(vm *v, int nargs, value *args) { +value Matrix_add__matrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,1.0); } -value XMatrix_add__nil(vm *v, int nargs, value *args) { +value Matrix_add_nil(vm *v, int nargs, value *args) { return MORPHO_SELF(args); } -value XMatrix_add__x(vm *v, int nargs, value *args) { +value Matrix_add_x(vm *v, int nargs, value *args) { if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr return _xpa(v,nargs,args,1.0,1.0); } -value XMatrix_sub__xmatrix(vm *v, int nargs, value *args) { +value Matrix_sub__matrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,-1.0); } -value XMatrix_sub__x(vm *v, int nargs, value *args) { +value Matrix_sub_x(vm *v, int nargs, value *args) { if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr return _xpa(v,nargs,args,1.0,-1.0); } -value XMatrix_subr__x(vm *v, int nargs, value *args) { +value Matrix_subr_x(vm *v, int nargs, value *args) { return _xpa(v,nargs,args,-1.0,1.0); } -value XMatrix_mul__float(vm *v, int nargs, value *args) { +value Matrix_mul_float(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); double scale; @@ -988,7 +988,7 @@ value XMatrix_mul__float(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { +value Matrix_mul__matrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -1001,7 +1001,7 @@ value XMatrix_mul__xmatrix(vm *v, int nargs, value *args) { return out; } -value XMatrix_div__float(vm *v, int nargs, value *args) { +value Matrix_div_float(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); double scale; @@ -1014,7 +1014,7 @@ value XMatrix_div__float(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { +value Matrix_div__matrix(vm *v, int nargs, value *args) { objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument @@ -1025,7 +1025,7 @@ value XMatrix_div__xmatrix(vm *v, int nargs, value *args) { } /** Accumulate in place */ -value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { +value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)); @@ -1041,15 +1041,15 @@ value XMatrix_acc__x_xmatrix(vm *v, int nargs, value *args) { * ---------------- */ /** Matrix norm */ -value XMatrix_norm__x(vm *v, int nargs, value *args) { +value Matrix_norm_x(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); double n; if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { if (fabs(n-1.0)nvals]; @@ -1072,7 +1072,7 @@ value XMatrix_sum(vm *v, int nargs, value *args) { } /** Computes the trace */ -value XMatrix_trace(vm *v, int nargs, value *args) { +value Matrix_trace(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); double out=0.0; LINALG_ERRCHECKVM(matrix_trace(a, &out)); @@ -1080,7 +1080,7 @@ value XMatrix_trace(vm *v, int nargs, value *args) { } /** Inverts a matrix */ -value XMatrix_transpose(vm *v, int nargs, value *args) { +value Matrix_transpose(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *new = matrix_clone(a); if (new) { @@ -1092,7 +1092,7 @@ value XMatrix_transpose(vm *v, int nargs, value *args) { } /** Inverts a matrix */ -value XMatrix_inverse(vm *v, int nargs, value *args) { +value Matrix_inverse(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *new = matrix_clone(a); if (new) LINALG_ERRCHECKVM(matrix_inverse(new)); @@ -1129,7 +1129,7 @@ static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *o } /** Finds the eigenvalues of a matrix */ -value XMatrix_eigenvalues(vm *v, int nargs, value *args) { +value Matrix_eigenvalues(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value out = MORPHO_NIL; @@ -1148,7 +1148,7 @@ value XMatrix_eigenvalues(vm *v, int nargs, value *args) { #define _CHK(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _eigensystem_cleanup; } /** Finds the eigenvalues and eigenvectors of a matrix */ -value XMatrix_eigensystem(vm *v, int nargs, value *args) { +value Matrix_eigensystem(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value ev=MORPHO_NIL; // Will hold eigenvalues @@ -1234,7 +1234,7 @@ static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) #define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } /** Singular Value Decomposition */ -value XMatrix_svd(vm *v, int nargs, value *args) { +value Matrix_svd(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); value s = MORPHO_NIL; // Will hold singular values @@ -1280,7 +1280,7 @@ value XMatrix_svd(vm *v, int nargs, value *args) { #define _CHK_QR(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _qr_cleanup; } /** QR Decomposition */ -value XMatrix_qr(vm *v, int nargs, value *args) { +value Matrix_qr(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *q = NULL; // Orthogonal matrix Q @@ -1319,7 +1319,7 @@ value XMatrix_qr(vm *v, int nargs, value *args) { * --------- */ /** Frobenius inner product */ -value XMatrix_inner(vm *v, int nargs, value *args) { +value Matrix_inner(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); double prod=0.0; @@ -1330,7 +1330,7 @@ value XMatrix_inner(vm *v, int nargs, value *args) { } /** Outer product */ -value XMatrix_outer(vm *v, int nargs, value *args) { +value Matrix_outer(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); @@ -1345,7 +1345,7 @@ value XMatrix_outer(vm *v, int nargs, value *args) { * --------- */ /** Reshape a matrix */ -value XMatrix_reshape(vm *v, int nargs, value *args) { +value Matrix_reshape(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -1365,7 +1365,7 @@ static value _roll(vm *v, objectxmatrix *a, int roll, int axis) { } /** Roll a matrix */ -value XMatrix_roll__int_int(vm *v, int nargs, value *args) { +value Matrix_roll_int_int(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), axis = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -1373,14 +1373,14 @@ value XMatrix_roll__int_int(vm *v, int nargs, value *args) { } /** Roll a matrix by row */ -value XMatrix_roll__int(vm *v, int nargs, value *args) { +value Matrix_roll_int(vm *v, int nargs, value *args) { objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); return _roll(v, a, roll, 0); } /** Enumerate protocol */ -value XMatrix_enumerate(vm *v, int nargs, value *args) { +value Matrix_enumerate(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -1397,13 +1397,13 @@ value XMatrix_enumerate(vm *v, int nargs, value *args) { } /** Number of matrix elements */ -value XMatrix_count(vm *v, int nargs, value *args) { +value Matrix_count(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); return MORPHO_INTEGER(a->ncols*a->nrows); } /** Matrix dimensions */ -value XMatrix_dimensions(vm *v, int nargs, value *args) { +value Matrix_dimensions(vm *v, int nargs, value *args) { objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); value dim[2] = { MORPHO_INTEGER(a->nrows), MORPHO_INTEGER(a->ncols) }; @@ -1413,51 +1413,51 @@ value XMatrix_dimensions(vm *v, int nargs, value *args) { } MORPHO_BEGINCLASS(XMatrix) -MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", XMatrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", XMatrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", XMatrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", XMatrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", XMatrix_enumerate, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", XMatrix_index__int_int, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "XMatrix (_,_)", XMatrix_index__x_x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", XMatrix_setindex__int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", XMatrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,XMatrix)", XMatrix_setindex__x_x_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", XMatrix_getcolumn__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", XMatrix_setcolumn__int_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", XMatrix_add__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (_)", XMatrix_add__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", XMatrix_sub__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", XMatrix_add__nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", XMatrix_sub__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "XMatrix (_)", XMatrix_subr__x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", XMatrix_mul__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (_)", XMatrix_mul__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", XMatrix_div__xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (_)", XMatrix_div__float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", XMatrix_acc__x_xmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INVERSE_METHOD, "XMatrix ()", XMatrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float (_)", XMatrix_norm__x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_NORM_METHOD, "Float ()", XMatrix_norm, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", XMatrix_sum, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRACE_METHOD, "Float ()", XMatrix_trace, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_TRANSPOSE_METHOD, "XMatrix ()", XMatrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_INNER_METHOD, "Float (XMatrix)", XMatrix_inner, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_OUTER_METHOD, "XMatrix (XMatrix)", XMatrix_outer, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENVALUES_METHOD, "Tuple ()", XMatrix_eigenvalues, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_EIGENSYSTEM_METHOD, "Tuple ()", XMatrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_SVD_METHOD, "Tuple ()", XMatrix_svd, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_QR_METHOD, "Tuple ()", XMatrix_qr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_RESHAPE_METHOD, "(Int,Int)", XMatrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int)", XMatrix_roll__int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(XMATRIX_ROLL_METHOD, "XMatrix (Int,Int)", XMatrix_roll__int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", XMatrix_enumerate, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", XMatrix_count, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(XMATRIX_DIMENSIONS_METHOD, "Tuple ()", XMatrix_dimensions, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index_int_int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "XMatrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,XMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "XMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "XMatrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", Matrix_sum, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Float ()", Matrix_trace, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "XMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Float (XMatrix)", Matrix_inner, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "XMatrix (XMatrix)", Matrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "XMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "XMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** @@ -1471,18 +1471,18 @@ void matrix_initialize(void) { objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); - value xmatrixclass=builtin_addclass(XMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), objclass); + value xmatrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), objclass); object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (XMatrix)", matrix_constructor__xmatrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "XMatrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (XMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(XMATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); complematrix_initialize(); } diff --git a/newlinalg/src/matrix.h b/newlinalg/src/matrix.h index 4ceb4c65..b4d80083 100644 --- a/newlinalg/src/matrix.h +++ b/newlinalg/src/matrix.h @@ -72,10 +72,10 @@ typedef value (*matrix_getelfn_t) (vm *, double *); typedef linalgError_t (*matrix_setelfn_t) (vm *, value, double *); typedef enum { - XMATRIX_NORM_MAX, - XMATRIX_NORM_L1, - XMATRIX_NORM_INF, - XMATRIX_NORM_FROBENIUS, + MATRIX_NORM_MAX, + MATRIX_NORM_L1, + MATRIX_NORM_INF, + MATRIX_NORM_FROBENIUS, } matrix_norm_t; /** Convert matrix_norm_t to a character for use with lapack routines */ @@ -132,72 +132,72 @@ matrixinterfacedefn *matrix_getinterface(objectxmatrix *a); * Matrix veneer class * ------------------------------------------------------- */ -#define XMATRIX_CLASSNAME "XMatrix" - -#define XMATRIX_GETCOLUMN_METHOD "column" -#define XMATRIX_DIMENSIONS_METHOD "dimensions" -#define XMATRIX_EIGENVALUES_METHOD "eigenvalues" -#define XMATRIX_EIGENSYSTEM_METHOD "eigensystem" -#define XMATRIX_SVD_METHOD "svd" -#define XMATRIX_QR_METHOD "qr" -#define XMATRIX_INNER_METHOD "inner" -#define XMATRIX_INVERSE_METHOD "inverse" -#define XMATRIX_NORM_METHOD "norm" -#define XMATRIX_OUTER_METHOD "outer" -#define XMATRIX_RESHAPE_METHOD "reshape" -#define XMATRIX_ROLL_METHOD "roll" -#define XMATRIX_SETCOLUMN_METHOD "setColumn" -#define XMATRIX_TRACE_METHOD "trace" -#define XMATRIX_TRANSPOSE_METHOD "transpose" - -#define XMATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" +#define MATRIX_CLASSNAME "XMatrix" + +#define MATRIX_GETCOLUMN_METHOD "column" +#define MATRIX_DIMENSIONS_METHOD "dimensions" +#define MATRIX_EIGENVALUES_METHOD "eigenvalues" +#define MATRIX_EIGENSYSTEM_METHOD "eigensystem" +#define MATRIX_SVD_METHOD "svd" +#define MATRIX_QR_METHOD "qr" +#define MATRIX_INNER_METHOD "inner" +#define MATRIX_INVERSE_METHOD "inverse" +#define MATRIX_NORM_METHOD "norm" +#define MATRIX_OUTER_METHOD "outer" +#define MATRIX_RESHAPE_METHOD "reshape" +#define MATRIX_ROLL_METHOD "roll" +#define MATRIX_SETCOLUMN_METHOD "setColumn" +#define MATRIX_TRACE_METHOD "trace" +#define MATRIX_TRANSPOSE_METHOD "transpose" + +#define MATRIX_IDENTITYCONSTRUCTOR "IdentityXMatrix" void matrix_initialize(void); #define IMPLEMENTATIONFN(fn) value fn (vm *v, int nargs, value *args) -IMPLEMENTATIONFN(matrix_constructor__xmatrix); - -IMPLEMENTATIONFN(XMatrix_print); -IMPLEMENTATIONFN(XMatrix_format); -IMPLEMENTATIONFN(XMatrix_assign); -IMPLEMENTATIONFN(XMatrix_clone); - -IMPLEMENTATIONFN(XMatrix_index__int); -IMPLEMENTATIONFN(XMatrix_index__int_int); -IMPLEMENTATIONFN(XMatrix_index__x_x); -IMPLEMENTATIONFN(XMatrix_setindex__int_x); -IMPLEMENTATIONFN(XMatrix_setindex__int_int_x); -IMPLEMENTATIONFN(XMatrix_setindex__x_x_xmatrix); - -IMPLEMENTATIONFN(XMatrix_getcolumn__int); -IMPLEMENTATIONFN(XMatrix_setcolumn__int_xmatrix); - -IMPLEMENTATIONFN(XMatrix_add__xmatrix); -IMPLEMENTATIONFN(XMatrix_add__nil); -IMPLEMENTATIONFN(XMatrix_add__x); -IMPLEMENTATIONFN(XMatrix_sub__xmatrix); -IMPLEMENTATIONFN(XMatrix_sub__x); -IMPLEMENTATIONFN(XMatrix_subr__x); -IMPLEMENTATIONFN(XMatrix_mul__float); -IMPLEMENTATIONFN(XMatrix_div__float); -IMPLEMENTATIONFN(XMatrix_div__xmatrix); -IMPLEMENTATIONFN(XMatrix_acc__x_xmatrix); - -IMPLEMENTATIONFN(XMatrix_norm__x); -IMPLEMENTATIONFN(XMatrix_norm); -IMPLEMENTATIONFN(XMatrix_sum); -IMPLEMENTATIONFN(XMatrix_transpose); -IMPLEMENTATIONFN(XMatrix_eigenvalues); -IMPLEMENTATIONFN(XMatrix_eigensystem); -IMPLEMENTATIONFN(XMatrix_svd); -IMPLEMENTATIONFN(XMatrix_qr); -IMPLEMENTATIONFN(XMatrix_reshape); -IMPLEMENTATIONFN(XMatrix_roll__int); -IMPLEMENTATIONFN(XMatrix_roll__int_int); -IMPLEMENTATIONFN(XMatrix_enumerate); -IMPLEMENTATIONFN(XMatrix_count); -IMPLEMENTATIONFN(XMatrix_dimensions); +IMPLEMENTATIONFN(matrix_constructor__matrix); + +IMPLEMENTATIONFN(Matrix_print); +IMPLEMENTATIONFN(Matrix_format); +IMPLEMENTATIONFN(Matrix_assign); +IMPLEMENTATIONFN(Matrix_clone); + +IMPLEMENTATIONFN(Matrix_index_int); +IMPLEMENTATIONFN(Matrix_index_int_int); +IMPLEMENTATIONFN(Matrix_index_x_x); +IMPLEMENTATIONFN(Matrix_setindex_int_x); +IMPLEMENTATIONFN(Matrix_setindex_int_int_x); +IMPLEMENTATIONFN(Matrix_setindex_x_x__matrix); + +IMPLEMENTATIONFN(Matrix_getcolumn_int); +IMPLEMENTATIONFN(Matrix_setcolumn_int__matrix); + +IMPLEMENTATIONFN(Matrix_add__matrix); +IMPLEMENTATIONFN(Matrix_add_nil); +IMPLEMENTATIONFN(Matrix_add_x); +IMPLEMENTATIONFN(Matrix_sub__matrix); +IMPLEMENTATIONFN(Matrix_sub_x); +IMPLEMENTATIONFN(Matrix_subr_x); +IMPLEMENTATIONFN(Matrix_mul_float); +IMPLEMENTATIONFN(Matrix_div_float); +IMPLEMENTATIONFN(Matrix_div__matrix); +IMPLEMENTATIONFN(Matrix_acc_x_x__matrix); + +IMPLEMENTATIONFN(Matrix_norm_x); +IMPLEMENTATIONFN(Matrix_norm); +IMPLEMENTATIONFN(Matrix_sum); +IMPLEMENTATIONFN(Matrix_transpose); +IMPLEMENTATIONFN(Matrix_eigenvalues); +IMPLEMENTATIONFN(Matrix_eigensystem); +IMPLEMENTATIONFN(Matrix_svd); +IMPLEMENTATIONFN(Matrix_qr); +IMPLEMENTATIONFN(Matrix_reshape); +IMPLEMENTATIONFN(Matrix_roll_int); +IMPLEMENTATIONFN(Matrix_roll_int_int); +IMPLEMENTATIONFN(Matrix_enumerate); +IMPLEMENTATIONFN(Matrix_count); +IMPLEMENTATIONFN(Matrix_dimensions); #undef DECLARE_IMPLEMENTATIONFN From b2376127b2551ab7383e37352f49c9dbb0fe17dd Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 18:24:16 -0500 Subject: [PATCH 097/156] Update objectxmatrix, method signatures and a few other pieces of the X* nomenclature --- newlinalg/src/complexmatrix.c | 96 +++++----- newlinalg/src/matrix.c | 346 +++++++++++++++++----------------- newlinalg/src/matrix.h | 68 +++---- 3 files changed, 255 insertions(+), 255 deletions(-) diff --git a/newlinalg/src/complexmatrix.c b/newlinalg/src/complexmatrix.c index ecb8a455..89f2d8b4 100644 --- a/newlinalg/src/complexmatrix.c +++ b/newlinalg/src/complexmatrix.c @@ -18,7 +18,7 @@ objecttype objectcomplexmatrixtype; #define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype -typedef objectxmatrix objectcomplexmatrix; +typedef objectmatrix objectcomplexmatrix; /* ********************************************************************** * ComplexMatrix utility functions @@ -57,7 +57,7 @@ static linalgError_t _setelfn(vm *v, value in, double *el) { } /** Evaluate norms */ -static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { +static double _normfn(objectmatrix *a, matrix_norm_t nrm) { char cnrm = matrix_normtolapack(nrm); int nrows=a->nrows, ncols=a->ncols; @@ -70,7 +70,7 @@ static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { } /** Low level linear solve */ -static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { +static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -84,7 +84,7 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { } /** Low level eigensolver */ -static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { +static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { int info, n=a->nrows; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -98,7 +98,7 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v } /** Low level SVD */ -static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { +static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { int info, m=a->nrows, n=a->ncols; int minmn = (m < n) ? m : n; @@ -139,7 +139,7 @@ static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx } /** Low level QR decomposition */ -static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { +static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { int info, m=a->nrows, n=a->ncols; int minmn = (m < n) ? m : n; __LAPACK_double_complex tau[minmn]; @@ -248,19 +248,19 @@ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t } /** Copies a real matrix x into a complex matrix y */ -static linalgError_t _stridedcopy(objectxmatrix *x, objectxmatrix *y, int offset) { +static linalgError_t _stridedcopy(objectmatrix *x, objectmatrix *y, int offset) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; cblas_dcopy((__LAPACK_int) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); return LINALGERR_OK; } -linalgError_t complexmatrix_promote(objectxmatrix *x, objectcomplexmatrix *y) { +linalgError_t complexmatrix_promote(objectmatrix *x, objectcomplexmatrix *y) { return _stridedcopy(x, y, 0); } /** Copies the real part of a complex matrix y into */ -linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectxmatrix *y, bool imag) { +linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectmatrix *y, bool imag) { return _stridedcopy(x, y, (imag?1:0)); } @@ -269,7 +269,7 @@ linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectxmatrix *y, boo * ---------------------- */ /** Performs c <- alpha*(a*b) + beta*c with complex matrices */ -linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxmatrix *b, MorphoComplex beta, objectxmatrix *c) { +linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectmatrix *a, objectmatrix *b, MorphoComplex beta, objectmatrix *c) { if (!(a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, @@ -281,7 +281,7 @@ linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectxmatrix *a, objectxm } /** Scales a matrix x <- scale * x >*/ -void complematrix_scale(objectxmatrix *a, MorphoComplex scale) { +void complematrix_scale(objectmatrix *a, MorphoComplex scale) { cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); } @@ -358,7 +358,7 @@ value complexmatrix_constructor__int(vm *v, int nargs, value *args) { } value complematrix_constructor__matrix(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); if (new) complexmatrix_promote(a, new); @@ -367,7 +367,7 @@ value complematrix_constructor__matrix(vm *v, int nargs, value *args) { /** Constructs a complexmatrix from a list of lists or tuples */ value complexmatrix_constructor__list(vm *v, int nargs, value *args) { - objectxmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); + objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); return morpho_wrapandbind(v, (object *) new); } @@ -376,7 +376,7 @@ value complexmatrix_constructor__array(vm *v, int nargs, value *args) { objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - objectxmatrix *new = matrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); + objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); return morpho_wrapandbind(v, (object *) new); } @@ -390,8 +390,8 @@ value complexmatrix_constructor__array(vm *v, int nargs, value *args) { /** Add a vector */ static value _axpy(vm *v, int nargs, value *args, double alpha) { - objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; if (a->ncols==b->ncols && a->nrows==b->nrows) { @@ -411,7 +411,7 @@ value ComplexMatrix_add__matrix(vm *v, int nargs, value *args) { value ComplexMatrix_sub__matrix(vm *v, int nargs, value *args) { value out = _axpy(v, nargs, args, -1.0); - if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETXMATRIX(out), -1.0); // -(-A + B) + if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETMATRIX(out), -1.0); // -(-A + B) return out; } @@ -420,21 +420,21 @@ value ComplexMatrix_subr__matrix(vm *v, int nargs, value *args) { } value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = matrix_clone(a); + objectmatrix *new = matrix_clone(a); if (new) complematrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); return morpho_wrapandbind(v, (object *) new); } /** Multiplication by a complexmatrix or a regular matrix */ -static bool _promote(vm *v, objectxmatrix *b, objectxmatrix **bp) { // Promotes b to a complexmatrix +static bool _promote(vm *v, objectmatrix *b, objectmatrix **bp) { // Promotes b to a complexmatrix *bp=complexmatrix_new(b->nrows, b->ncols, true); if (!*bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } return complexmatrix_promote(b, *bp)==LINALGERR_OK; } -static value _axb(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b returning a wrapped value +static value _axb(vm *v, objectmatrix *a, objectmatrix *b) { // Performs a*b returning a wrapped value if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } @@ -443,7 +443,7 @@ static value _axb(vm *v, objectxmatrix *a, objectxmatrix *b) { // Performs a*b r } static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { // Driver routine for a*b - objectxmatrix *A=MORPHO_GETXMATRIX(a), *B=MORPHO_GETXMATRIX(b), *bp=NULL; + objectmatrix *A=MORPHO_GETMATRIX(a), *B=MORPHO_GETMATRIX(b), *bp=NULL; if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } // Promote b if requested value out = (swap ? _axb(v, B, A) : _axb(v, A, B)); // Multiply, swapping arguments if requested if (bp) object_free((object *) bp); @@ -463,21 +463,21 @@ value ComplexMatrix_mulr__matrix(vm *v, int nargs, value *args) { } value ComplexMatrix_div__matrix(vm *v, int nargs, value *args) { - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; - objectxmatrix *new=matrix_clone(b); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; + objectmatrix *new=matrix_clone(b); if (new && _promote(v, A, &ap)) matrix_solve(ap, new); return morpho_wrapandbind(v, (object *) new); } value ComplexMatrix_divr__matrix(vm *v, int nargs, value *args) { - objectxmatrix *A=MORPHO_GETXMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; + objectmatrix *A=MORPHO_GETMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; if (_promote(v, b, &bp)) matrix_solve(A, bp); // Promote the matrix that will contain the solution anyway return morpho_wrapandbind(v, (object *) bp); } /** Computes the trace */ value ComplexMatrix_trace(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); MorphoComplex tr=MCBuild(0,0); LINALG_ERRCHECKVM(complexmatrix_trace(a, &tr)); objectcomplex *new = object_newcomplex(creal(tr), cimag(tr)); @@ -486,7 +486,7 @@ value ComplexMatrix_trace(vm *v, int nargs, value *args) { /** Inverts a matrix */ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); value out=MORPHO_NIL; objectcomplexmatrix *new = matrix_clone(a); @@ -497,8 +497,8 @@ value ComplexMatrix_inverse(vm *v, int nargs, value *args) { } static value _realimag(vm *v, int nargs, value *args, bool imag) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=matrix_new(a->nrows, a->ncols, false); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_new(a->nrows, a->ncols, false); if (new) complexmatrix_demote(a, new, imag); return morpho_wrapandbind(v, (object *) new); } @@ -514,8 +514,8 @@ value ComplexMatrix_imag(vm *v, int nargs, value *args) { } static value _conj(vm *v, int nargs, value *args, bool trans) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=matrix_clone(a); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_clone(a); if (new) { if (trans) matrix_transpose(a, new); cblas_dscal(a->nrows*a->ncols, -1.0, new->elements+1, new->nvals); @@ -539,8 +539,8 @@ value ComplexMatrix_conjTranspose(vm *v, int nargs, value *args) { /** Frobenius inner product */ value ComplexMatrix_inner(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectcomplexmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); MorphoComplex prod=MCBuild(0.0, 0.0); value out = MORPHO_NIL; @@ -554,8 +554,8 @@ value ComplexMatrix_inner(vm *v, int nargs, value *args) { /** Outer product */ value ComplexMatrix_outer(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectcomplexmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); objectcomplexmatrix *new=complexmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); if (new) LINALG_ERRCHECKVM(complexmatrix_r1update(MCBuild(1.0,0.0), a, b, new)); @@ -577,29 +577,29 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_se MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (XMatrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), @@ -607,11 +607,11 @@ MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_P MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", Matrix_sum, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "XMatrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "XMatrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "Matrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "Matrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Complex (XMatrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Complex (Matrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), @@ -630,7 +630,7 @@ MORPHO_ENDCLASS * ********************************************************************** */ void complexmatrix_initialize(void) { - objectcomplexmatrixtype=object_addtype(&objectxmatrixdefn); + objectcomplexmatrixtype=object_addtype(&objectmatrixdefn); matrix_addinterface(&complexmatrixdefn); objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); @@ -642,7 +642,7 @@ void complexmatrix_initialize(void) { morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (XMatrix)", complematrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Matrix)", complematrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/newlinalg/src/matrix.c b/newlinalg/src/matrix.c index 3c6cb68c..8c725680 100644 --- a/newlinalg/src/matrix.c +++ b/newlinalg/src/matrix.c @@ -25,8 +25,8 @@ void matrix_addinterface(matrixinterfacedefn *defn) { } else UNREACHABLE("Too many matrix interface definitions."); } -matrixinterfacedefn *matrix_getinterface(objectxmatrix *a) { - int iindx = a->obj.type-OBJECT_XMATRIX; +matrixinterfacedefn *matrix_getinterface(objectmatrix *a) { + int iindx = a->obj.type-OBJECT_MATRIX; if (iindxtype-OBJECT_XMATRIX; + int iindx=MORPHO_GETOBJECT(val)->type-OBJECT_MATRIX; return iindx>=0 && iindxnels; +size_t objectmatrix_sizefn(object *obj) { + return sizeof(objectmatrix)+sizeof(double) * ((objectmatrix *) obj)->nels; } void objectmatrix_printfn(object *obj, void *v) { @@ -56,21 +56,21 @@ void objectmatrix_printfn(object *obj, void *v) { morpho_printf(v, ">"); } -objecttypedefn objectxmatrixdefn = { +objecttypedefn objectmatrixdefn = { .printfn=objectmatrix_printfn, .markfn=NULL, .freefn=NULL, - .sizefn=objectxmatrix_sizefn, + .sizefn=objectmatrix_sizefn, .hashfn=NULL, .cmpfn=NULL }; /* ********************************************************************** - * XMatrix utility functions + * Matrix utility functions * ********************************************************************** */ /* ---------------------- - * XMatrix interface + * Matrix interface * ---------------------- */ static void _printelfn(vm *v, double *el) { @@ -103,7 +103,7 @@ char matrix_normtolapack(matrix_norm_t norm) { } /** Evaluate norms */ -static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { +static double _normfn(objectmatrix *a, matrix_norm_t nrm) { char cnrm = matrix_normtolapack(nrm); int nrows=a->nrows, ncols=a->ncols; @@ -116,7 +116,7 @@ static double _normfn(objectxmatrix *a, matrix_norm_t nrm) { } /** Low level linear solve */ -static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { +static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE @@ -129,7 +129,7 @@ static linalgError_t _solve(objectxmatrix *a, objectxmatrix *b, int *pivot) { } /** Low level eigensolver */ -static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { +static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { int info, n=a->nrows; double wr[n], wi[n]; @@ -145,7 +145,7 @@ static linalgError_t _eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *v } /** Low level SVD */ -static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { +static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { int info, m=a->nrows, n=a->ncols; int minmn = (m < n) ? m : n; @@ -179,7 +179,7 @@ static linalgError_t _svd(objectxmatrix *a, double *s, objectxmatrix *u, objectx } /** Low level QR decomposition without pivoting */ -static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { +static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { int info, m=a->nrows, n=a->ncols; int minmn = (m < n) ? m : n; double tau[minmn]; @@ -239,7 +239,7 @@ static linalgError_t _qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { * Interface definition * ---------------------- */ -matrixinterfacedefn xmatrixdefn = { +matrixinterfacedefn matrixdefn = { .printelfn = _printelfn, .printeltobufffn = _printeltobufffn, .getelfn = _getelfn, @@ -256,9 +256,9 @@ matrixinterfacedefn xmatrixdefn = { * ---------------------- */ /** Create a generic matrix with given type and layout */ -objectxmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { +objectmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { MatrixCount_t nels = nrows*ncols*nvals; - objectxmatrix *new = (objectxmatrix *) object_new(sizeof(objectxmatrix) + nels*sizeof(double), type); + objectmatrix *new = (objectmatrix *) object_new(sizeof(objectmatrix) + nels*sizeof(double), type); if (new) { new->nrows=nrows; @@ -273,13 +273,13 @@ objectxmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_ } /** Create a new real matrix */ -objectxmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { - return matrix_newwithtype(OBJECT_XMATRIX, nrows, ncols, 1, zero); +objectmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return matrix_newwithtype(OBJECT_MATRIX, nrows, ncols, 1, zero); } /** Clone a matrix */ -objectxmatrix *matrix_clone(objectxmatrix *in) { - objectxmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); +objectmatrix *matrix_clone(objectmatrix *in) { + objectmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); return new; @@ -308,7 +308,7 @@ static bool _length(value v, int *len) { } /** Create a matrix from a list of lists (or tuples) */ -objectxmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { +objectmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { value iel, jel; int nrows=0, ncols=0, rlen; @@ -321,7 +321,7 @@ objectxmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixI } } - objectxmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); + objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); if (!new) return NULL; for (int i=0; idimensions[0]); int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); - objectxmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); + objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); if (!new) return NULL; for (int i=0; incols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; @@ -371,7 +371,7 @@ linalgError_t matrix_setelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixId /** @brief Gets a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t matrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { +linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; @@ -380,7 +380,7 @@ linalgError_t matrix_getelement(objectxmatrix *matrix, MatrixIdx_t row, MatrixId /** @brief Gets a pointer to a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t matrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { +linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); @@ -388,7 +388,7 @@ linalgError_t matrix_getelementptr(objectxmatrix *matrix, MatrixIdx_t row, Matri } /** Copies the column col of matrix a into the column vector b */ -linalgError_t matrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { +linalgError_t matrix_getcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; @@ -397,7 +397,7 @@ linalgError_t matrix_getcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix } /** Copies the column vector b into column col of matrix a */ -linalgError_t matrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix *b) { +linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; @@ -410,7 +410,7 @@ linalgError_t matrix_setcolumn(objectxmatrix *a, MatrixIdx_t col, objectxmatrix * ---------------------- */ /** Vector addition: Performs y <- alpha*x + y */ -linalgError_t matrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); @@ -418,7 +418,7 @@ linalgError_t matrix_axpy(double alpha, objectxmatrix *x, objectxmatrix *y) { } /** Copies a matrix y <- x */ -linalgError_t matrix_copy(objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); @@ -426,12 +426,12 @@ linalgError_t matrix_copy(objectxmatrix *x, objectxmatrix *y) { } /** Scales a matrix x <- scale * x >*/ -void matrix_scale(objectxmatrix *x, double scale) { +void matrix_scale(objectmatrix *x, double scale) { cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); } /** Loads the identity matrix a <- I(n) */ -linalgError_t matrix_identity(objectxmatrix *x) { +linalgError_t matrix_identity(objectmatrix *x) { if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; @@ -439,7 +439,7 @@ linalgError_t matrix_identity(objectxmatrix *x) { } /** Performs z <- alpha*(x*y) + beta*z */ -linalgError_t matrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, double beta, objectxmatrix *z) { +linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double beta, objectmatrix *z) { if (!(x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols)) return LINALGERR_INCOMPATIBLE_DIM; cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); @@ -447,7 +447,7 @@ linalgError_t matrix_mmul(double alpha, objectxmatrix *x, objectxmatrix *y, doub } /** Performs x <- alpha*x + beta */ -linalgError_t matrix_addscalar(objectxmatrix *x, double alpha, double beta) { +linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta) { for (MatrixCount_t i=0; incols*x->nrows; i++) { for (int k=0; knvals; k++) { x->elements[i*x->nvals+k]*=alpha; @@ -458,7 +458,7 @@ linalgError_t matrix_addscalar(objectxmatrix *x, double alpha, double beta) { } /** Performs y <- x^T>*/ -linalgError_t matrix_transpose(objectxmatrix *x, objectxmatrix *y) { +linalgError_t matrix_transpose(objectmatrix *x, objectmatrix *y) { if (!(x->ncols==y->nrows && x->nrows==y->ncols)) return LINALGERR_INCOMPATIBLE_DIM; for (MatrixCount_t i=0; incols; i++) { @@ -476,12 +476,12 @@ linalgError_t matrix_transpose(objectxmatrix *x, objectxmatrix *y) { * ---------------------- */ /** Computes various matrix norms */ -double matrix_norm(objectxmatrix *a, matrix_norm_t norm) { +double matrix_norm(objectmatrix *a, matrix_norm_t norm) { return matrix_getinterface(a)->normfn(a, norm); } /** Computes the sum of all elements in a matrix */ -void matrix_sum(objectxmatrix *a, double *sum) { +void matrix_sum(objectmatrix *a, double *sum) { double c[a->nvals], y, t; for (int i=0; invals; i++) { sum[i]=0; c[i]=0; } @@ -496,7 +496,7 @@ void matrix_sum(objectxmatrix *a, double *sum) { } /** Calculate the trace of a matrix */ -linalgError_t matrix_trace(objectxmatrix *a, double *out) { +linalgError_t matrix_trace(objectmatrix *a, double *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; *out = 0.0; for (int i = 0; i < a->nrows; i++) { @@ -511,7 +511,7 @@ linalgError_t matrix_trace(objectxmatrix *a, double *out) { * ---------------------- */ /** Finds the Frobenius inner product of two matrices */ -linalgError_t matrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { +linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); @@ -519,7 +519,7 @@ linalgError_t matrix_inner(objectxmatrix *x, objectxmatrix *y, double *out) { } /** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ -linalgError_t matrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, objectxmatrix *c) { +linalgError_t matrix_r1update(double alpha, objectmatrix *a, objectmatrix *b, objectmatrix *c) { MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; @@ -528,18 +528,18 @@ linalgError_t matrix_r1update(double alpha, objectxmatrix *a, objectxmatrix *b, } /** Solve the linear system a.x = b using stack allocated memory for temporary */ -linalgError_t matrix_solvesmall(objectxmatrix *a, objectxmatrix *b) { +linalgError_t matrix_solvesmall(objectmatrix *a, objectmatrix *b) { int pivot[a->nrows]; double els[a->nels]; - objectxmatrix A = MORPHO_STATICXMATRIX(els, a->nrows, a->ncols); + objectmatrix A = MORPHO_STATICMATRIX(els, a->nrows, a->ncols); matrix_copy(a, &A); return (matrix_getinterface(a)->solvefn) (&A, b, pivot); } /** Solve the linear system a.x = b using heap allocated memory for temporary */ -linalgError_t matrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { +linalgError_t matrix_solvelarge(objectmatrix *a, objectmatrix *b) { int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); - objectxmatrix *A = matrix_clone(a); + objectmatrix *A = matrix_clone(a); linalgError_t out = LINALGERR_ALLOC; if (pivot && A) { out = (matrix_getinterface(a)->solvefn) (A, b, pivot); @@ -553,7 +553,7 @@ linalgError_t matrix_solvelarge(objectxmatrix *a, objectxmatrix *b) { * @param[in] a lhs * @param[in|out] b rhs — overwritten by the solution * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t matrix_solve(objectxmatrix *a, objectxmatrix *b) { +linalgError_t matrix_solve(objectmatrix *a, objectmatrix *b) { if (MATRIX_ISSMALL(a)) return matrix_solvesmall(a, b); else return matrix_solvelarge(a, b); } @@ -561,7 +561,7 @@ linalgError_t matrix_solve(objectxmatrix *a, objectxmatrix *b) { /** Inverts the matrix a * @param[in] a matrix to be inverted * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t matrix_inverse(objectxmatrix *a) { +linalgError_t matrix_inverse(objectmatrix *a) { int nrows=a->nrows, ncols=a->ncols, info; int pivot[nrows]; @@ -583,14 +583,14 @@ linalgError_t matrix_inverse(objectxmatrix *a) { } /** Interface to eigensystem */ -linalgError_t matrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *vec) { +linalgError_t matrix_eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return LINALGERR_INCOMPATIBLE_DIM; matrix_eigenfn_t efn = matrix_getinterface(a)->eigenfn; if (!efn) return LINALGERR_NOT_SUPPORTED; - objectxmatrix *temp = matrix_clone(a); + objectmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; return efn(temp, w, vec); @@ -601,7 +601,7 @@ linalgError_t matrix_eigen(objectxmatrix *a, MorphoComplex *w, objectxmatrix *ve * ---------------------- */ /** Prints a matrix */ -void matrix_print(vm *v, objectxmatrix *m) { +void matrix_print(vm *v, objectmatrix *m) { matrixinterfacedefn *interface=matrix_getinterface(m); double *elptr; for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m @@ -616,7 +616,7 @@ void matrix_print(vm *v, objectxmatrix *m) { } /** Prints a matrix to a buffer */ -bool matrix_printtobuffer(objectxmatrix *m, char *format, varray_char *out) { +bool matrix_printtobuffer(objectmatrix *m, char *format, varray_char *out) { matrixinterfacedefn *interface=matrix_getinterface(m); double *elptr; for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m @@ -638,7 +638,7 @@ bool matrix_printtobuffer(objectxmatrix *m, char *format, varray_char *out) { * ---------------------- */ /** Rolls the matrix list */ -static void _rollflat(objectxmatrix *a, objectxmatrix *b, int nplaces) { +static void _rollflat(objectmatrix *a, objectmatrix *b, int nplaces) { MatrixCount_t N=a->nrows*a->ncols*a->nvals; MatrixCount_t n = abs(nplaces)*a->nvals; if (n>N) n = n % N; @@ -654,13 +654,13 @@ static void _rollflat(objectxmatrix *a, objectxmatrix *b, int nplaces) { } /** Copies a arow from matrix a into brow for matrix b */ -static void _copyrow(objectxmatrix *a, MatrixIdx_t arow, objectxmatrix *b, MatrixIdx_t brow) { +static void _copyrow(objectmatrix *a, MatrixIdx_t arow, objectmatrix *b, MatrixIdx_t brow) { for (MatrixIdx_t i=0; incols; i++) memcpy(b->elements+b->nvals*(i*b->nrows+brow), a->elements+a->nvals*(i*a->nrows+arow), sizeof(double)*a->nvals); } /** Rolls a list by a number of elements along a given axis; stores the result in b */ -linalgError_t matrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatrix *b) { +linalgError_t matrix_roll(objectmatrix *a, int nplaces, int axis, objectmatrix *b) { if (!(a->nrows==b->nrows && a->ncols==b->ncols && a->nvals==b->nvals)) return LINALGERR_INCOMPATIBLE_DIM; switch(axis) { @@ -679,33 +679,33 @@ linalgError_t matrix_roll(objectxmatrix *a, int nplaces, int axis, objectxmatrix } /* ********************************************************************** - * XMatrix constructors + * Matrix constructors * ********************************************************************** */ value matrix_constructor__int_int(vm *v, int nargs, value *args) { MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - objectxmatrix *new=matrix_new(nrows, ncols, true); + objectmatrix *new=matrix_new(nrows, ncols, true); return morpho_wrapandbind(v, (object *) new); } value matrix_constructor__int(vm *v, int nargs, value *args) { MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - objectxmatrix *new=matrix_new(nrows, 1, true); + objectmatrix *new=matrix_new(nrows, 1, true); return morpho_wrapandbind(v, (object *) new); } /** Clones a matrix */ value matrix_constructor__matrix(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); return morpho_wrapandbind(v, (object *) matrix_clone(a)); } /** Constructs a matrix from a list of lists or tuples */ value matrix_constructor__list(vm *v, int nargs, value *args) { - objectxmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_XMATRIX, 1); + objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_MATRIX, 1); return morpho_wrapandbind(v, (object *) new); } @@ -714,7 +714,7 @@ value matrix_constructor__array(vm *v, int nargs, value *args) { objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - objectxmatrix *new = matrix_arrayconstructor(v, a, OBJECT_XMATRIX, 1); + objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_MATRIX, 1); return morpho_wrapandbind(v, (object *) new); } @@ -727,14 +727,14 @@ value matrix_constructor__err(vm *v, int nargs, value *args) { value matrix_identityconstructor(vm *v, int nargs, value *args) { MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - objectxmatrix *new = matrix_new(n,n,false); + objectmatrix *new = matrix_new(n,n,false); if (new) matrix_identity(new); return morpho_wrapandbind(v, (object *) new); } /* ********************************************************************** - * XMatrix veneer class + * Matrix veneer class * ********************************************************************** */ /* ---------------------- @@ -743,7 +743,7 @@ value matrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value Matrix_print(vm *v, int nargs, value *args) { - objectxmatrix *m=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); matrix_print(v, m); return MORPHO_NIL; } @@ -754,7 +754,7 @@ value Matrix_format(vm *v, int nargs, value *args) { varray_char str; varray_charinit(&str); - if (matrix_printtobuffer(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + if (matrix_printtobuffer(MORPHO_GETMATRIX(MORPHO_SELF(args)), MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), &str)) { out = object_stringfromvarraychar(&str); @@ -767,16 +767,16 @@ value Matrix_format(vm *v, int nargs, value *args) { /** Copies the contents of one matrix into another */ value Matrix_assign(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); LINALG_ERRCHECKVM(matrix_copy(b, a)); return MORPHO_NIL; } /** Clones a matrix */ value Matrix_clone(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=matrix_clone(a); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_clone(a); return morpho_wrapandbind(v, (object *) new); } @@ -785,7 +785,7 @@ value Matrix_clone(vm *v, int nargs, value *args) { * --------- */ value Matrix_index_int_int(vm *v, int nargs, value *args) { - objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); value out=MORPHO_NIL; @@ -819,7 +819,7 @@ static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, Matr return LINALGERR_OK; } -static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx_t jcnt, objectxmatrix *a, objectxmatrix *b, bool swap) { +static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx_t jcnt, objectmatrix *a, objectmatrix *b, bool swap) { double *ael, *bel; for (MatrixIdx_t j=0; jsetelfn(v, in, elptr)); @@ -866,20 +866,20 @@ static void _setindex(vm *v, objectxmatrix *m, MatrixIdx_t i, MatrixIdx_t j, val value Matrix_setindex_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); + _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); return MORPHO_NIL; } value Matrix_setindex_int_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - _setindex(v, MORPHO_GETXMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); + _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); return MORPHO_NIL; } value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { - objectxmatrix *m = MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *msrc = MORPHO_GETXMATRIX(MORPHO_GETARG(args, 2)); + objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *msrc = MORPHO_GETMATRIX(MORPHO_GETARG(args, 2)); value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); MatrixIdx_t icnt=0, jcnt=0; @@ -895,12 +895,12 @@ value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { * --------- */ value Matrix_getcolumn_int(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; if (i>=0 && incols) { - objectxmatrix *new=matrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); + objectmatrix *new=matrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); if (new) matrix_getcolumn(a, i, new); out=morpho_wrapandbind(v, (object *)new); } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); @@ -909,9 +909,9 @@ value Matrix_getcolumn_int(vm *v, int nargs, value *args) { } value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { - LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETXMATRIX(MORPHO_SELF(args)), + LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETMATRIX(MORPHO_SELF(args)), MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)))); + MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)))); return MORPHO_NIL; } @@ -921,9 +921,9 @@ value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { /** Add a vector */ static value _axpy(vm *v, int nargs, value *args, double alpha) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Receiver is left hand operand - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // Argument is right hand operand - objectxmatrix *new = NULL; + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); // Receiver is left hand operand + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); // Argument is right hand operand + objectmatrix *new = NULL; value out=MORPHO_NIL; if (a->ncols==b->ncols && a->nrows==b->nrows) { @@ -937,8 +937,8 @@ static value _axpy(vm *v, int nargs, value *args, double alpha) { /** Add a scalar */ static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new=NULL; + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=NULL; value out=MORPHO_NIL; double beta; @@ -978,23 +978,23 @@ value Matrix_subr_x(vm *v, int nargs, value *args) { } value Matrix_mul_float(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double scale; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; - objectxmatrix *new = matrix_clone(a); + objectmatrix *new = matrix_clone(a); if (new) matrix_scale(new, scale); return morpho_wrapandbind(v, (object *) new); } value Matrix_mul__matrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; if (a->ncols==b->nrows) { - objectxmatrix *new = matrix_new(a->nrows, b->ncols, false); + objectmatrix *new = matrix_new(a->nrows, b->ncols, false); if (new) LINALG_ERRCHECKVM(matrix_mmul(1.0, a, b, 0.0, new)); out = morpho_wrapandbind(v, (object *) new); } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); @@ -1002,23 +1002,23 @@ value Matrix_mul__matrix(vm *v, int nargs, value *args) { } value Matrix_div_float(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double scale; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; scale = 1.0/scale; if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); - objectxmatrix *new = matrix_clone(a); + objectmatrix *new = matrix_clone(a); if (new) matrix_scale(new, scale); return morpho_wrapandbind(v, (object *) new); } value Matrix_div__matrix(vm *v, int nargs, value *args) { - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument - objectxmatrix *sol = matrix_clone(b); + objectmatrix *sol = matrix_clone(b); if (sol) LINALG_ERRCHECKVM(matrix_solve(a, sol)); return morpho_wrapandbind(v, (object *) sol); @@ -1026,8 +1026,8 @@ value Matrix_div__matrix(vm *v, int nargs, value *args) { /** Accumulate in place */ value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 1)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); double alpha=1.0; if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } @@ -1042,7 +1042,7 @@ value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { /** Matrix norm */ value Matrix_norm_x(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double n; if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { @@ -1058,13 +1058,13 @@ value Matrix_norm_x(vm *v, int nargs, value *args) { /** Frobenius norm */ value Matrix_norm(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); return MORPHO_FLOAT(matrix_norm(a, MATRIX_NORM_FROBENIUS)); } /** Sums all matrix values */ value Matrix_sum(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double sum[a->nvals]; matrix_sum(a, sum); @@ -1073,7 +1073,7 @@ value Matrix_sum(vm *v, int nargs, value *args) { /** Computes the trace */ value Matrix_trace(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double out=0.0; LINALG_ERRCHECKVM(matrix_trace(a, &out)); return MORPHO_FLOAT(out); @@ -1081,8 +1081,8 @@ value Matrix_trace(vm *v, int nargs, value *args) { /** Inverts a matrix */ value Matrix_transpose(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = matrix_clone(a); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new = matrix_clone(a); if (new) { new->ncols=a->nrows; new->nrows=a->ncols; @@ -1093,8 +1093,8 @@ value Matrix_transpose(vm *v, int nargs, value *args) { /** Inverts a matrix */ value Matrix_inverse(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *new = matrix_clone(a); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new = matrix_clone(a); if (new) LINALG_ERRCHECKVM(matrix_inverse(new)); return morpho_wrapandbind(v, (object *) new); @@ -1130,7 +1130,7 @@ static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *o /** Finds the eigenvalues of a matrix */ value Matrix_eigenvalues(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); value out = MORPHO_NIL; MatrixIdx_t n=a->ncols; @@ -1149,10 +1149,10 @@ value Matrix_eigenvalues(vm *v, int nargs, value *args) { /** Finds the eigenvalues and eigenvectors of a matrix */ value Matrix_eigensystem(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); value ev=MORPHO_NIL; // Will hold eigenvalues - objectxmatrix *evec=NULL; // Holds eigenvectors + objectmatrix *evec=NULL; // Holds eigenvectors objecttuple *otuple=NULL; // Tuple to return everything MatrixIdx_t n=a->ncols; @@ -1191,11 +1191,11 @@ value Matrix_eigensystem(vm *v, int nargs, value *args) { * ---------------- */ /** Interface to SVD */ -linalgError_t matrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxmatrix *vt) { +linalgError_t matrix_svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { if (u && ((a->nrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; if (vt && ((a->ncols != vt->nrows) || (a->ncols != vt->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - objectxmatrix *temp = matrix_clone(a); + objectmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; linalgError_t err = matrix_getinterface(a)->svdfn (temp, s, u, vt); @@ -1208,11 +1208,11 @@ linalgError_t matrix_svd(objectxmatrix *a, double *s, objectxmatrix *u, objectxm * ---------------- */ /** Interface to QR decomposition */ -linalgError_t matrix_qr(objectxmatrix *a, objectxmatrix *q, objectxmatrix *r) { +linalgError_t matrix_qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { if (q && ((a->nrows != q->nrows) || (a->nrows != q->ncols))) return LINALGERR_INCOMPATIBLE_DIM; if (r && ((a->nrows != r->nrows) || (a->ncols != r->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - objectxmatrix *temp = matrix_clone(a); + objectmatrix *temp = matrix_clone(a); if (!temp) return LINALGERR_ALLOC; linalgError_t err = matrix_getinterface(a)->qrfn (temp, q, r); @@ -1235,11 +1235,11 @@ static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) #define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } /** Singular Value Decomposition */ value Matrix_svd(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); value s = MORPHO_NIL; // Will hold singular values - objectxmatrix *u = NULL; // Left singular vectors - objectxmatrix *vt = NULL; // Right singular vectors (transposed) + objectmatrix *u = NULL; // Left singular vectors + objectmatrix *vt = NULL; // Right singular vectors (transposed) objecttuple *otuple = NULL; // Tuple to return everything MatrixIdx_t m = a->nrows, n = a->ncols; @@ -1281,10 +1281,10 @@ value Matrix_svd(vm *v, int nargs, value *args) { #define _CHK_QR(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _qr_cleanup; } /** QR Decomposition */ value Matrix_qr(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectxmatrix *q = NULL; // Orthogonal matrix Q - objectxmatrix *r = NULL; // Upper triangular matrix R + objectmatrix *q = NULL; // Orthogonal matrix Q + objectmatrix *r = NULL; // Upper triangular matrix R objecttuple *otuple = NULL; // Tuple to return everything MatrixIdx_t m = a->nrows, n = a->ncols; @@ -1320,8 +1320,8 @@ value Matrix_qr(vm *v, int nargs, value *args) { /** Frobenius inner product */ value Matrix_inner(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); double prod=0.0; LINALG_ERRCHECKVM(matrix_inner(a, b, &prod)); @@ -1331,10 +1331,10 @@ value Matrix_inner(vm *v, int nargs, value *args) { /** Outer product */ value Matrix_outer(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); - objectxmatrix *b=MORPHO_GETXMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - objectxmatrix *new=matrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + objectmatrix *new=matrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); if (new) LINALG_ERRCHECKVM(matrix_r1update(1.0, a, b, new)); return morpho_wrapandbind(v, (object *) new); @@ -1346,7 +1346,7 @@ value Matrix_outer(vm *v, int nargs, value *args) { /** Reshape a matrix */ value Matrix_reshape(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -1358,15 +1358,15 @@ value Matrix_reshape(vm *v, int nargs, value *args) { return MORPHO_NIL; } -static value _roll(vm *v, objectxmatrix *a, int roll, int axis) { - objectxmatrix *new = matrix_clone(a); +static value _roll(vm *v, objectmatrix *a, int roll, int axis) { + objectmatrix *new = matrix_clone(a); if (new) matrix_roll(a, roll, axis, new); return morpho_wrapandbind(v, (object *) new); } /** Roll a matrix */ value Matrix_roll_int_int(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), axis = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); return _roll(v, a, roll, axis); @@ -1374,14 +1374,14 @@ value Matrix_roll_int_int(vm *v, int nargs, value *args) { /** Roll a matrix by row */ value Matrix_roll_int(vm *v, int nargs, value *args) { - objectxmatrix *a = MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); return _roll(v, a, roll, 0); } /** Enumerate protocol */ value Matrix_enumerate(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -1398,13 +1398,13 @@ value Matrix_enumerate(vm *v, int nargs, value *args) { /** Number of matrix elements */ value Matrix_count(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); return MORPHO_INTEGER(a->ncols*a->nrows); } /** Matrix dimensions */ value Matrix_dimensions(vm *v, int nargs, value *args) { - objectxmatrix *a=MORPHO_GETXMATRIX(MORPHO_SELF(args)); + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); value dim[2] = { MORPHO_INTEGER(a->nrows), MORPHO_INTEGER(a->ncols) }; objecttuple *new=object_newtuple(2, dim); @@ -1412,49 +1412,49 @@ value Matrix_dimensions(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } -MORPHO_BEGINCLASS(XMatrix) +MORPHO_BEGINCLASS(Matrix) MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(XMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "XMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(Matrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "Matrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index_int_int, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "XMatrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,XMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "XMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, XMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (XMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "XMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (XMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "XMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "XMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "XMatrix (XMatrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "XMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (XMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "XMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, XMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "XMatrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Matrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Matrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (Matrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (Matrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, Matrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "Matrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", Matrix_sum, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Float ()", Matrix_trace, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "XMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Float (XMatrix)", Matrix_inner, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "XMatrix (XMatrix)", Matrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "Matrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Float (Matrix)", Matrix_inner, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "Matrix (Matrix)", Matrix_outer, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "XMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "XMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) @@ -1465,24 +1465,24 @@ MORPHO_ENDCLASS * ********************************************************************** */ void matrix_initialize(void) { - objectxmatrixtype=object_addtype(&objectxmatrixdefn); - matrix_addinterface(&xmatrixdefn); + objectmatrixtype=object_addtype(&objectmatrixdefn); + matrix_addinterface(&matrixdefn); objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); - value xmatrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(XMatrix), objclass); - object_setveneerclass(OBJECT_XMATRIX, xmatrixclass); + value matrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(Matrix), objclass); + object_setveneerclass(OBJECT_MATRIX, matrixclass); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (XMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "XMatrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Matrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "XMatrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); complematrix_initialize(); } diff --git a/newlinalg/src/matrix.h b/newlinalg/src/matrix.h index b4d80083..7fa15bd3 100644 --- a/newlinalg/src/matrix.h +++ b/newlinalg/src/matrix.h @@ -13,10 +13,10 @@ * Matrix object type * ------------------------------------------------------- */ -extern objecttype objectxmatrixtype; -#define OBJECT_XMATRIX objectxmatrixtype +extern objecttype objectmatrixtype; +#define OBJECT_MATRIX objectmatrixtype -extern objecttypedefn objectxmatrixdefn; +extern objecttypedefn objectmatrixdefn; typedef int MatrixIdx_t; // Type used for matrix indices typedef size_t MatrixCount_t; // Type used to count total number of elements @@ -35,17 +35,17 @@ typedef struct { MatrixCount_t nels; // Total number of entries (nrows*ncols*nvals) double *elements; double matrixdata[]; -} objectxmatrix; +} objectmatrix; /** Tests whether an object is a matrix */ -#define MORPHO_ISXMATRIX(val) object_istype(val, OBJECT_XMATRIX) +#define MORPHO_ISMATRIX(val) object_istype(val, OBJECT_MATRIX) /** Gets the object as an matrix */ -#define MORPHO_GETXMATRIX(val) ((objectxmatrix *) MORPHO_GETOBJECT(val)) +#define MORPHO_GETMATRIX(val) ((objectmatrix *) MORPHO_GETOBJECT(val)) /** @brief Use to create static matrices on the C stack @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ -#define MORPHO_STATICXMATRIX(darray, nr, nc) { .obj.type=OBJECT_XMATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } +#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } /** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ #define MATRIX_ISSMALL(m) (m->nrows*m->ncols Date: Wed, 14 Jan 2026 19:16:03 -0500 Subject: [PATCH 098/156] Transfer new libary into the source tree --- src/linalg/CMakeLists.txt | 4 + src/linalg/complexmatrix.c | 649 ++++++++++ src/linalg/complexmatrix.h | 20 + src/linalg/matrix.c | 2361 +++++++++++++++++------------------- src/linalg/matrix.h | 321 ++--- src/linalg/newlinalg.c | 52 + src/linalg/newlinalg.h | 93 ++ src/linalg/xmatrix.c | 1585 ++++++++++++++++++++++++ src/linalg/xmatrix.h | 205 ++++ 9 files changed, 3916 insertions(+), 1374 deletions(-) create mode 100644 src/linalg/complexmatrix.c create mode 100644 src/linalg/complexmatrix.h create mode 100644 src/linalg/newlinalg.c create mode 100644 src/linalg/newlinalg.h create mode 100644 src/linalg/xmatrix.c create mode 100644 src/linalg/xmatrix.h diff --git a/src/linalg/CMakeLists.txt b/src/linalg/CMakeLists.txt index b767d8fe..98b7f0b7 100644 --- a/src/linalg/CMakeLists.txt +++ b/src/linalg/CMakeLists.txt @@ -1,5 +1,7 @@ target_sources(morpho PRIVATE + complexmatrix.c complexmatrix.h + linalg.c linalg.h matrix.c matrix.h sparse.c sparse.h ) @@ -9,6 +11,8 @@ target_sources(morpho FILE_SET public_headers TYPE HEADERS FILES + linalg.h matrix.h + complexmatrix.h sparse.h ) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c new file mode 100644 index 00000000..89f2d8b4 --- /dev/null +++ b/src/linalg/complexmatrix.c @@ -0,0 +1,649 @@ +/** @file complexmatrix.c + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#define ACCELERATE_NEW_LAPACK +#define MORPHO_INCLUDE_LINALG + +#include + +#include "newlinalg.h" +#include "matrix.h" +#include "complexmatrix.h" +#include "format.h" +#include "cmplx.h" + +objecttype objectcomplexmatrixtype; +#define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype + +typedef objectmatrix objectcomplexmatrix; + +/* ********************************************************************** + * ComplexMatrix utility functions + * ********************************************************************** */ + +/* ---------------------- + * Callbacks + * ---------------------- */ + +static void _printelfn(vm *v, double *el) { + objectcomplex cmplx = MORPHO_STATICCOMPLEX(el[0], el[1]); + complex_print(v, &cmplx); +} + +static bool _printeltobufffn(varray_char *out, char *format, double *el) { + if (!format_printtobuffer(MORPHO_FLOAT(el[0]), format, out)) return false; + varray_charadd(out, " ", 1); + varray_charadd(out, (el[1]<0 ? "-" : "+"), 1); + if (!format_printtobuffer(MORPHO_FLOAT(fabs(el[1])), format, out)) return false; + varray_charadd(out, "im", 2); + return true; +} + +static value _getelfn(vm *v, double *el) { + objectcomplex *new = object_newcomplex(el[0], el[1]); + return morpho_wrapandbind(v, (object *) new); +} + +static linalgError_t _setelfn(vm *v, value in, double *el) { + if (MORPHO_ISCOMPLEX(in)) { + *((MorphoComplex *) el) = MORPHO_GETCOMPLEX(in)->Z; + } else if (morpho_valuetofloat(in, el)) { + el[1] = 0.0; // Set imaginary part to zero + } else return LINALGERR_NON_NUMERICAL; + return LINALGERR_OK; +} + +/** Evaluate norms */ +static double _normfn(objectmatrix *a, matrix_norm_t nrm) { + char cnrm = matrix_normtolapack(nrm); + int nrows=a->nrows, ncols=a->ncols; + +#ifdef MORPHO_LINALG_USE_LAPACKE + return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); +#else + double work[a->nrows]; + return zlange_(&cnrm, &nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, work); +#endif +} + +/** Low level linear solve */ +static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); +#else + zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, + &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/** Low level eigensolver */ +static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { + int info, n=a->nrows; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, (__LAPACK_double_complex *) w, NULL, n, (vec ? vec->elements : NULL), n); +#else + int lwork=4*n; MorphoComplex work[4*n]; double rwork[2*n]; + zgeev_("N", (vec ? "V" : "N"), &n, (__LAPACK_double_complex *) a->elements, &n, (__LAPACK_double_complex *) w, NULL, &n, (__LAPACK_double_complex *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/** Low level SVD */ +static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zgesvd(LAPACK_COL_MAJOR, + (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U + (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT + m, n, + (__LAPACK_double_complex *) a->elements, m, // input matrix A (overwritten) + s, // singular values (min(m,n)) + (__LAPACK_double_complex *) (u ? u->elements : NULL), m, // U matrix (m×m) + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), n // VT matrix (n×n) + ); +#else + int lwork = -1; + __LAPACK_double_complex work_query; + double rwork[5 * minmn]; // rwork needs at least 5*min(m,n) for zgesvd + + // Query optimal work size + zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, + (__LAPACK_double_complex *) a->elements, &m, s, + (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + &work_query, &lwork, rwork, &info); + + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + lwork = (int)creal(work_query); + __LAPACK_double_complex work[lwork]; + zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, + (__LAPACK_double_complex *) a->elements, &m, s, + (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, + (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + work, &lwork, rwork, &info); +#endif + + return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/** Low level QR decomposition */ +static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + __LAPACK_double_complex tau[minmn]; + + // Compute QR factorization without pivoting: A = Q*R +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zgeqrf(LAPACK_COL_MAJOR, m, n, (__LAPACK_double_complex *) a->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + int lwork = -1; + __LAPACK_double_complex work_query; + + // Query optimal work size for ZGEQRF, which is reused for ZUNGQR + zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + int lwork_geqrf = (int) creal(work_query); + __LAPACK_double_complex work[lwork_geqrf]; + lwork = lwork_geqrf; + + // Compute QR factorization without pivoting + zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // Extract R (upper triangle of a) into r + // Copy entire matrix first then zero out below the diagonal + matrix_copy(a, r); + __LAPACK_double_complex *relems = (__LAPACK_double_complex *) r->elements; + for (int j = 0; j < n && j < m - 1; j++) { + memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(__LAPACK_double_complex)); + } + + // Generate Q from reflectors + if (q) { + // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) + // ZGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns + __LAPACK_double_complex *aelems = (__LAPACK_double_complex *) a->elements; + __LAPACK_double_complex *qelems = (__LAPACK_double_complex *) q->elements; + for (int j = 0; j < n; j++) { + cblas_zcopy(m, &aelems[j * m], 1, &qelems[j * m], 1); + } + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_zungqr(LAPACK_COL_MAJOR, m, minmn, minmn, (__LAPACK_double_complex *) q->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + lwork = lwork_geqrf; + zungqr_(&m, &minmn, &minmn, (__LAPACK_double_complex *) q->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // If Q should be m×m, zero out remaining columns if m > minmn + if (m > minmn) memset(&q->elements[minmn * m * q->nvals], 0, (m - minmn) * m * sizeof(__LAPACK_double_complex)); + } + + return LINALGERR_OK; +} + +/* ---------------------- + * Interface definition + * ---------------------- */ + +matrixinterfacedefn complexmatrixdefn = { + .printelfn = _printelfn, + .printeltobufffn = _printeltobufffn, + .getelfn = _getelfn, + .setelfn = _setelfn, + .normfn = _normfn, + .solvefn = _solve, + .eigenfn = _eigen, + .svdfn = _svd, + .qrfn = _qr +}; + +/* ---------------------- + * Constructor + * ---------------------- */ + +/** Create a new complex matrix */ +objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return (objectcomplexmatrix *) matrix_newwithtype(OBJECT_COMPLEXMATRIX, nrows, ncols, 2, zero); +} + +/* ---------------------- + * Element access + * ---------------------- */ + +/** Sets a matrix element. */ +linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; + + MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); + matrix->elements[ix]=creal(value); + matrix->elements[ix+1]=cimag(value); + return LINALGERR_OK; +} + +/** Gets a matrix element */ +linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; + + MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); + if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); + return LINALGERR_OK; +} + +/** Copies a real matrix x into a complex matrix y */ +static linalgError_t _stridedcopy(objectmatrix *x, objectmatrix *y, int offset) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); + return LINALGERR_OK; +} + +linalgError_t complexmatrix_promote(objectmatrix *x, objectcomplexmatrix *y) { + return _stridedcopy(x, y, 0); +} + +/** Copies the real part of a complex matrix y into */ +linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectmatrix *y, bool imag) { + return _stridedcopy(x, y, (imag?1:0)); +} + +/* ---------------------- + * Complex arithmetic + * ---------------------- */ + +/** Performs c <- alpha*(a*b) + beta*c with complex matrices */ +linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectmatrix *a, objectmatrix *b, MorphoComplex beta, objectmatrix *c) { + if (!(a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, + a->nrows, b->ncols, a->ncols, + &alpha, (__LAPACK_double_complex *) a->elements, + a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, + &beta, (__LAPACK_double_complex *) c->elements, c->nrows); + return LINALGERR_OK; +} + +/** Scales a matrix x <- scale * x >*/ +void complematrix_scale(objectmatrix *a, MorphoComplex scale) { + cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); +} + +/** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ +linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { + if (!(a->ncols==b->ncols && a->nrows==b->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, + (__LAPACK_double_complex *) b->elements, 1, + (__LAPACK_double_complex *) out); + return LINALGERR_OK; +} + +/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ +linalgError_t complexmatrix_r1update(MorphoComplex alpha, objectcomplexmatrix *a, objectcomplexmatrix *b, objectcomplexmatrix *c) { + MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; + if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_zgeru(CblasColMajor, m, n, (__LAPACK_double_complex *) &alpha, (__LAPACK_double_complex *) a->elements, 1, + (__LAPACK_double_complex *) b->elements, 1, + (__LAPACK_double_complex *) c->elements, c->nrows); + return LINALGERR_OK; +} + +/** Calculate the trace of a matrix */ +linalgError_t complexmatrix_trace(objectcomplexmatrix *a, MorphoComplex *out) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + MorphoComplex one = MCBuild(1.0, 0.0); + cblas_zdotu_sub(a->nrows, (__LAPACK_double_complex *) a->elements, a->ncols+1, (__LAPACK_double_complex *) &one, 0, (__LAPACK_double_complex *) out); + return LINALGERR_OK; +} + +/** Inverts the matrix a + * @param[in] a matrix to be inverted + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ +linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { + int nrows=a->nrows, ncols=a->ncols, info; + int pivot[nrows]; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); +#else + zgetrf_(&nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, pivot, &info); +#endif + if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_zgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); +#else + int lwork=nrows*ncols; __LAPACK_double_complex work[nrows*ncols]; + zgetri_(&nrows, (__LAPACK_double_complex *) a->elements, &nrows, pivot, work, &lwork, &info); +#endif + + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/* ********************************************************************** + * ComplexMatrix constructors + * ********************************************************************** */ + +value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + MatrixIdx_t ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + + objectcomplexmatrix *new=complexmatrix_new(nrows, ncols, true); + return morpho_wrapandbind(v, (object *) new); +} + +value complexmatrix_constructor__int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(nrows, 1, true); + return morpho_wrapandbind(v, (object *) new); +} + +value complematrix_constructor__matrix(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); + if (new) complexmatrix_promote(a, new); + return morpho_wrapandbind(v, (object *) new); +} + +/** Constructs a complexmatrix from a list of lists or tuples */ +value complexmatrix_constructor__list(vm *v, int nargs, value *args) { + objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); + return morpho_wrapandbind(v, (object *) new); +} + +/** Constructs a matrix from an array */ +value complexmatrix_constructor__array(vm *v, int nargs, value *args) { + objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); + if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); + return morpho_wrapandbind(v, (object *) new); +} + +/* ********************************************************************** + * ComplexMatrix veneer class + * ********************************************************************** */ + +/* ---------------------- + * Arithmetic + * ---------------------- */ + +/** Add a vector */ +static value _axpy(vm *v, int nargs, value *args, double alpha) { + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; + + if (a->ncols==b->ncols && a->nrows==b->nrows) { + objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); + if (new) { + complexmatrix_promote(b, new); + matrix_axpy(alpha, a, new); + } + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); + return out; +} + +value ComplexMatrix_add__matrix(vm *v, int nargs, value *args) { + return _axpy(v, nargs, args, 1.0); +} + +value ComplexMatrix_sub__matrix(vm *v, int nargs, value *args) { + value out = _axpy(v, nargs, args, -1.0); + if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETMATRIX(out), -1.0); // -(-A + B) + return out; +} + +value ComplexMatrix_subr__matrix(vm *v, int nargs, value *args) { + return _axpy(v, nargs, args, -1.0); +} + +value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + + objectmatrix *new = matrix_clone(a); + if (new) complematrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); + return morpho_wrapandbind(v, (object *) new); +} + +/** Multiplication by a complexmatrix or a regular matrix */ +static bool _promote(vm *v, objectmatrix *b, objectmatrix **bp) { // Promotes b to a complexmatrix + *bp=complexmatrix_new(b->nrows, b->ncols, true); + if (!*bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } + return complexmatrix_promote(b, *bp)==LINALGERR_OK; +} + +static value _axb(vm *v, objectmatrix *a, objectmatrix *b) { // Performs a*b returning a wrapped value + if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } + objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + complexmatrix_mmul(MCBuild(1.0, 0.0), a, b, MCBuild(0.0, 0.0), new); + return morpho_wrapandbind(v, (object *) new); +} + +static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { // Driver routine for a*b + objectmatrix *A=MORPHO_GETMATRIX(a), *B=MORPHO_GETMATRIX(b), *bp=NULL; + if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } // Promote b if requested + value out = (swap ? _axb(v, B, A) : _axb(v, A, B)); // Multiply, swapping arguments if requested + if (bp) object_free((object *) bp); + return out; +} + +value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), false, false); +} + +value ComplexMatrix_mul__matrix(vm *v, int nargs, value *args) { + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, false); +} + +value ComplexMatrix_mulr__matrix(vm *v, int nargs, value *args) { + return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, true); +} + +value ComplexMatrix_div__matrix(vm *v, int nargs, value *args) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; + objectmatrix *new=matrix_clone(b); + if (new && _promote(v, A, &ap)) matrix_solve(ap, new); + return morpho_wrapandbind(v, (object *) new); +} + +value ComplexMatrix_divr__matrix(vm *v, int nargs, value *args) { + objectmatrix *A=MORPHO_GETMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; + if (_promote(v, b, &bp)) matrix_solve(A, bp); // Promote the matrix that will contain the solution anyway + return morpho_wrapandbind(v, (object *) bp); +} + +/** Computes the trace */ +value ComplexMatrix_trace(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + MorphoComplex tr=MCBuild(0,0); + LINALG_ERRCHECKVM(complexmatrix_trace(a, &tr)); + objectcomplex *new = object_newcomplex(creal(tr), cimag(tr)); + return morpho_wrapandbind(v, (object *) new); +} + +/** Inverts a matrix */ +value ComplexMatrix_inverse(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + objectcomplexmatrix *new = matrix_clone(a); + out = morpho_wrapandbind(v, (object *) new); + if (new) LINALG_ERRCHECKVM(complexmatrix_inverse(new)); + + return out; +} + +static value _realimag(vm *v, int nargs, value *args, bool imag) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_new(a->nrows, a->ncols, false); + if (new) complexmatrix_demote(a, new, imag); + return morpho_wrapandbind(v, (object *) new); +} + +/** Extract real part */ +value ComplexMatrix_real(vm *v, int nargs, value *args) { + return _realimag(v, nargs, args, false); +} + +/** Extract imaginary part */ +value ComplexMatrix_imag(vm *v, int nargs, value *args) { + return _realimag(v, nargs, args, true); +} + +static value _conj(vm *v, int nargs, value *args, bool trans) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_clone(a); + if (new) { + if (trans) matrix_transpose(a, new); + cblas_dscal(a->nrows*a->ncols, -1.0, new->elements+1, new->nvals); + } + return morpho_wrapandbind(v, (object *) new); +} + +/** Extract imaginary part */ +value ComplexMatrix_conj(vm *v, int nargs, value *args) { + return _conj(v, nargs, args, false); +} + +/** Return conjugate transpose */ +value ComplexMatrix_conjTranspose(vm *v, int nargs, value *args) { + return _conj(v, nargs, args, true); +} + +/* --------- + * Products + * --------- */ + +/** Frobenius inner product */ +value ComplexMatrix_inner(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + MorphoComplex prod=MCBuild(0.0, 0.0); + value out = MORPHO_NIL; + + if (complexmatrix_inner(a, b, &prod)==LINALGERR_OK) { + objectcomplex *new = object_newcomplex(creal(prod), cimag(prod)); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); + + return out; +} + +/** Outer product */ +value ComplexMatrix_outer(vm *v, int nargs, value *args) { + objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + objectcomplexmatrix *new=complexmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + if (new) LINALG_ERRCHECKVM(complexmatrix_r1update(MCBuild(1.0,0.0), a, b, new)); + + return morpho_wrapandbind(v, (object *) new); +} + +MORPHO_BEGINCLASS(ComplexMatrix) +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index_x_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", Matrix_sum, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "Matrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "Matrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Complex (Matrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) +MORPHO_ENDCLASS + +/* ********************************************************************** + * Initialization + * ********************************************************************** */ + +void complexmatrix_initialize(void) { + objectcomplexmatrixtype=object_addtype(&objectmatrixdefn); + matrix_addinterface(&complexmatrixdefn); + + objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); + value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); + + value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), objclass); + object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); + + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Matrix)", complematrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); +} diff --git a/src/linalg/complexmatrix.h b/src/linalg/complexmatrix.h new file mode 100644 index 00000000..cdb7bdd8 --- /dev/null +++ b/src/linalg/complexmatrix.h @@ -0,0 +1,20 @@ +/** @file complexmatrix.h + * @author T J Atherton + * + * @brief New linear algebra library +*/ + +#ifndef complexmatrix_h +#define complexmatrix_h + +/* ------------------------------------------------------- + * ComplexMatrix veneer class + * ------------------------------------------------------- */ + +#define COMPLEXMATRIX_CLASSNAME "ComplexMatrix" + +#define COMPLEXMATRIX_CONJTRANSPOSE_METHOD "conjTranspose" + +void complexmatrix_initialize(void); + +#endif diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index b71e1aed..8c725680 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1,35 +1,59 @@ /** @file matrix.c * @author T J Atherton * - * @brief Veneer class over the objectmatrix type that interfaces with blas and lapack - */ + * @brief New matrices +*/ -#include "build.h" -#ifdef MORPHO_INCLUDE_LINALG +#define ACCELERATE_NEW_LAPACK +#define MORPHO_INCLUDE_LINALG -#include -#include "morpho.h" -#include "classes.h" - -#include "matrix.h" -#include "sparse.h" +#include "newlinalg.h" #include "format.h" +/* ********************************************************************** + * Matrix interface definitions + * ********************************************************************** */ + +/** Hold the matrix interface definitions as they're created */ +static matrixinterfacedefn _matrixdefn[LINALG_MAXMATRIXDEFNS]; +objecttype matrixinterfacedefnnext=0; /** Type of the next object definition */ + +void matrix_addinterface(matrixinterfacedefn *defn) { + if (matrixinterfacedefnnextobj.type-OBJECT_MATRIX; + if (iindxtype-OBJECT_MATRIX; + return iindx>=0 && iindxncols * - ((objectmatrix *) obj)->nrows; + return sizeof(objectmatrix)+sizeof(double) * ((objectmatrix *) obj)->nels; } void objectmatrix_printfn(object *obj, void *v) { - morpho_printf(v, ""); + objectclass *klass=object_getveneerclass(obj->type); + morpho_printf(v, "<"); + morpho_printvalue(v, klass->name); + morpho_printf(v, ">"); } objecttypedefn objectmatrixdefn = { @@ -41,1524 +65,1408 @@ objecttypedefn objectmatrixdefn = { .cmpfn=NULL }; -/** Creates a matrix object */ -objectmatrix *object_newmatrix(unsigned int nrows, unsigned int ncols, bool zero) { - unsigned int nel = nrows*ncols; - objectmatrix *new = (objectmatrix *) object_new(sizeof(objectmatrix)+nel*sizeof(double), OBJECT_MATRIX); - - if (new) { - new->ncols=ncols; - new->nrows=nrows; - new->elements=new->matrixdata; - if (zero) { - memset(new->elements, 0, sizeof(double)*nel); - } - } - - return new; -} - /* ********************************************************************** - * Other constructors + * Matrix utility functions * ********************************************************************** */ -/* - * Create matrices from array objects - */ - -void matrix_raiseerror(vm *v, objectmatrixerror err) { - switch(err) { - case MATRIX_OK: break; - case MATRIX_INCMPTBLDIM: morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); break; - case MATRIX_SING: morpho_runtimeerror(v, MATRIX_SINGULAR); break; - case MATRIX_INVLD: morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); break; - case MATRIX_BNDS: morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); break; - case MATRIX_NSQ: morpho_runtimeerror(v, MATRIX_NOTSQ); break; - case MATRIX_FAILED: morpho_runtimeerror(v, MATRIX_OPFAILED); break; - case MATRIX_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; - } +/* ---------------------- + * Matrix interface + * ---------------------- */ + +static void _printelfn(vm *v, double *el) { + double val=*el; + morpho_printf(v, "%g", (fabs(val)ndim; n++) { - int k=MORPHO_GETINTEGERVALUE(array->data[n]); - if (k>dim[n]) dim[n]=k; +static bool _printeltobufffn(varray_char *out, char *format, double *el) { + return format_printtobuffer(MORPHO_FLOAT(*el), format, out); +} + +static value _getelfn(vm *v, double *el) { + return MORPHO_FLOAT(*el); +} + +static linalgError_t _setelfn(vm *v, value in, double *el) { + if (!morpho_valuetofloat(in, el)) return LINALGERR_NON_NUMERICAL; + return LINALGERR_OK; +} + +/** Convert matrix_norm_t to a character for use with lapack routines */ +char matrix_normtolapack(matrix_norm_t norm) { + switch (norm) { + case MATRIX_NORM_MAX: return 'M'; + case MATRIX_NORM_L1: return '1'; + case MATRIX_NORM_INF: return 'I'; + case MATRIX_NORM_FROBENIUS: return 'F'; } + return '\0'; +} + +/** Evaluate norms */ +static double _normfn(objectmatrix *a, matrix_norm_t nrm) { + char cnrm = matrix_normtolapack(nrm); + int nrows=a->nrows, ncols=a->ncols; - if (maxdimndim) return false; +#ifdef MORPHO_LINALG_USE_LAPACKE + return LAPACKE_dlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); +#else + double work[a->nrows]; + return dlange_(&cnrm, &nrows, &ncols, a->elements, &nrows, work); +#endif +} + +/** Low level linear solve */ +static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; - for (unsigned int i=array->ndim; indim+array->nelements; i++) { - if (MORPHO_ISARRAY(array->data[i])) { - if (!matrix_getarraydimensions(MORPHO_GETARRAY(array->data[i]), dim+n, maxdim-n, &m)) return false; - } - } - *ndim=n+m; +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); +#else + dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); +#endif - return true; + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } -/** Looks up an array element recursively if necessary */ -value matrix_getarrayelement(objectarray *array, unsigned int ndim, unsigned int *indx) { - unsigned int na=array->ndim; - value out; +/** Low level eigensolver */ +static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { + int info, n=a->nrows; + double wr[n], wi[n]; - if (array_getelement(array, na, indx, &out)==ARRAY_OK) { - if (ndim==na) return out; - if (MORPHO_ISARRAY(out)) { - return matrix_getarrayelement(MORPHO_GETARRAY(out), ndim-na, indx+na); - } - } +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); +#else + int lwork=4*n; double work[4*n]; + dgeev_("N", (vec ? "V" : "N"), &n, a->elements, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); +#endif + for (int i=0; i0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); +} + +/** Low level SVD */ +static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, + (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U + (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT + m, n, + a->elements, m, // input matrix A (overwritten) + s, // singular values (min(m,n)) + (u ? u->elements : NULL), m, // U matrix (m×m) + (vt ? vt->elements : NULL), n // VT matrix (n×n) + ); +#else + int lwork = -1; + double work_query; + // Query optimal work size + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + lwork = (int)work_query; + double work[lwork]; + dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, + (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, + work, &lwork, &info); +#endif + + return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); } -/** Creates a new array from a list of values */ -objectmatrix *object_matrixfromarray(objectarray *array) { - unsigned int dim[2]={0,1}; // The 1 is to allow for vector arrays. - unsigned int ndim=0; - objectmatrix *ret=NULL; +/** Low level QR decomposition without pivoting */ +static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { + int info, m=a->nrows, n=a->ncols; + int minmn = (m < n) ? m : n; + double tau[minmn]; + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dgeqrf(LAPACK_COL_MAJOR, m, n, a->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + int lwork = -1; + double work_query; + + // Query optimal work size for DGEQRF, which is reused for DORGQR + dgeqrf_(&m, &n, a->elements, &m, tau, &work_query, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); + + int lwork_geqrf = (int) work_query; + double work[lwork_geqrf]; + lwork = lwork_geqrf; - if (matrix_getarraydimensions(array, dim, 2, &ndim)) { - ret=object_newmatrix(dim[0], dim[1], true); + // Compute QR factorization without pivoting + dgeqrf_(&m, &n, a->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // Extract R (upper triangle of a) into r + // Copy entire matrix first, then zero out below the diagonal + matrix_copy(a, r); + // Only process columns where there are rows below the diagonal (j < m - 1) + for (int j = 0; j < n && j < m - 1; j++) { + memset(&r->elements[j * m + (j + 1)], 0, (m - j - 1) * sizeof(double)); } - unsigned int indx[2]; - if (ret) for (unsigned int i=0; ielements[j*dim[0]+i]); - } else if (!MORPHO_ISNIL(f)) { - object_free((object *) ret); return NULL; - } - } + // Generate Q from reflectors + if (q) { + // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) + // DGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns + for (int j = 0; j < n; j++) cblas_dcopy(m, &a->elements[j * m], 1, &q->elements[j * m], 1); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info = LAPACKE_dorgqr(LAPACK_COL_MAJOR, m, minmn, minmn, q->elements, m, tau); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#else + lwork = lwork_geqrf; + dorgqr_(&m, &minmn, &minmn, q->elements, &m, tau, work, &lwork, &info); + if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); +#endif + + // If Q should be m×m, zero out remaining columns if m > minmn + // DORGQR only generates the first minmn columns, so we zero the rest + if (m > minmn) memset(&q->elements[minmn * m], 0, (m - minmn) * m * sizeof(double)); } - return ret; + return LINALGERR_OK; } -/* - * Create matrices from lists - */ +/* ---------------------- + * Interface definition + * ---------------------- */ + +matrixinterfacedefn matrixdefn = { + .printelfn = _printelfn, + .printeltobufffn = _printeltobufffn, + .getelfn = _getelfn, + .setelfn = _setelfn, + .normfn = _normfn, + .solvefn = _solve, + .eigenfn = _eigen, + .svdfn = _svd, + .qrfn = _qr +}; + +/* ---------------------- + * Constructors + * ---------------------- */ -/** Recurses into an objectlist to find the dimensions of the array and all child arrays - * @param[in] list - to search - * @param[out] dim - array of dimensions to be filled out (must be zero'd before initial call) - * @param[in] maxdim - maximum number of dimensions - * @param[out] ndim - number of dimensions of the array */ -bool matrix_getlistdimensions(objectlist *list, unsigned int dim[], unsigned int maxdim, unsigned int *ndim) { - unsigned int m=0; +/** Create a generic matrix with given type and layout */ +objectmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { + MatrixCount_t nels = nrows*ncols*nvals; + objectmatrix *new = (objectmatrix *) object_new(sizeof(objectmatrix) + nels*sizeof(double), type); - if (maxdim==0) return false; + if (new) { + new->nrows=nrows; + new->ncols=ncols; + new->nvals=nvals; + new->nels=nels; + new->elements=new->matrixdata; + if (zero) memset(new->elements, 0, nels*sizeof(double)); + } - /* Store the length */ - if (list->val.count>dim[0]) dim[0]=list->val.count; + return new; +} + +/** Create a new real matrix */ +objectmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { + return matrix_newwithtype(OBJECT_MATRIX, nrows, ncols, 1, zero); +} + +/** Clone a matrix */ +objectmatrix *matrix_clone(objectmatrix *in) { + objectmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); - for (unsigned int i=0; ival.count; i++) { - if (MORPHO_ISLIST(list->val.data[i]) && maxdim>0) { - matrix_getlistdimensions(MORPHO_GETLIST(list->val.data[i]), dim+1, maxdim-1, &m); - } + if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); + return new; +} + +static bool _getelement(value v, int i, value *out) { + if (MORPHO_ISLIST(v)) { + return list_getelement(MORPHO_GETLIST(v), i, out); + } else if (MORPHO_ISTUPLE(v)) { + return tuple_getelement(MORPHO_GETTUPLE(v), i, out); + } else if (MORPHO_ISNUMBER(v) || MORPHO_ISCOMPLEX(v)) { + if (i==0) { *out = v; return true; } } - *ndim=m+1; - - return true; + return false; } -/** Gets a matrix element from a (potentially nested) list. */ -bool matrix_getlistelement(objectlist *list, unsigned int ndim, unsigned int *indx, value *val) { - value out=MORPHO_NIL; - objectlist *l=list; - for (unsigned int i=0; ival.count) { - out=l->val.data[indx[i]]; - if (incols) { + ncols=rlen; + } } - if (ndim>2) return false; - - unsigned int indx[2]; - if (ret) for (unsigned int i=0; ielements[j*dim[0]+i]); - } else { - object_free((object *) ret); - return NULL; + objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); + if (!new) return NULL; + + for (int i=0; isetelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); } } } - return ret; + return new; } -/** Creates a matrix from a list of floats */ -objectmatrix *object_matrixfromfloats(unsigned int nrows, unsigned int ncols, double *list) { - objectmatrix *ret=NULL; +/** Construct a matrix from an array */ +objectmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals) { + int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); + int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); - ret=object_newmatrix(nrows, ncols, true); - if (ret) cblas_dcopy(ncols*nrows, list, 1, ret->elements, 1); - - return ret; -} - -/* - * Clone matrices - */ - -/** Clone a matrix */ -objectmatrix *object_clonematrix(objectmatrix *in) { - objectmatrix *new = object_newmatrix(in->nrows, in->ncols, false); + objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); + if (!new) return NULL; - if (new) { - cblas_dcopy(in->ncols * in->nrows, in->elements, 1, new->elements, 1); + for (int i=0; isetelfn(v, el, new->elements+(j*nrows + i)*new->nvals); + } + } } - return new; } -/* ********************************************************************** - * Matrix operations - * ********************************************************************* */ +/* ---------------------- + * Accessing elements + * ---------------------- */ /** @brief Sets a matrix element. @returns true if the element is in the range of the matrix, false otherwise */ -bool matrix_setelement(objectmatrix *matrix, unsigned int row, unsigned int col, double value) { - if (colncols && rownrows) { - matrix->elements[col*matrix->nrows+row]=value; - return true; - } - return false; +linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; + + matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; + return LINALGERR_OK; } /** @brief Gets a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -bool matrix_getelement(objectmatrix *matrix, unsigned int row, unsigned int col, double *value) { - if (colncols && rownrows) { - if (value) *value=matrix->elements[col*matrix->nrows+row]; - return true; - } - return false; +linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; + + if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; + return LINALGERR_OK; } -/** @brief Gets a column's entries - * @param[in] matrix - the matrix - * @param[in] col - column number - * @param[out] v - column entries (matrix->nrows in number) +/** @brief Gets a pointer to a matrix element * @returns true if the element is in the range of the matrix, false otherwise */ -bool matrix_getcolumn(objectmatrix *matrix, unsigned int col, double **v) { - if (colncols) { - *v=&matrix->elements[col*matrix->nrows]; - return true; - } - return false; +linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { + if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; + + if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); + return LINALGERR_OK; } -/** @brief Sets a column's entries - * @param[in] matrix - the matrix - * @param[in] col - column number - * @param[in] v - column entries (matrix->nrows in number) - * @returns true if the element is in the range of the matrix, false otherwise */ -bool matrix_setcolumn(objectmatrix *matrix, unsigned int col, double *v) { - if (colncols) { - cblas_dcopy(matrix->nrows, v, 1, &matrix->elements[col*matrix->nrows], 1); - return true; - } - return false; +/** Copies the column col of matrix a into the column vector b */ +linalgError_t matrix_getcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col*a->nrows, 1, b->elements, 1); + return LINALGERR_OK; } -/** @brief Add a vector to a column in a matrix - * @param[in] m - the matrix - * @param[in] col - column number - * @param[in] alpha - scale - * @param[out] v - column entries (matrix->nrows in number) [should have m->nrows entries] - * @returns true on success */ -bool matrix_addtocolumn(objectmatrix *m, unsigned int col, double alpha, double *v) { - if (colncols) { - cblas_daxpy(m->nrows, alpha, v, 1, &m->elements[col*m->nrows], 1); - return true; - } - return false; +/** Copies the column vector b into column col of matrix a */ +linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col*a->nrows, 1); + return LINALGERR_OK; } -/* ********************************************************************** - * Matrix arithmetic - * ********************************************************************* */ +/* ---------------------- + * Arithmetic operations + * ---------------------- */ + +/** Vector addition: Performs y <- alpha*x + y */ +linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); + return LINALGERR_OK; +} -/** Copies one matrix to another */ -unsigned int matrix_countdof(objectmatrix *a) { - return a->ncols*a->nrows; +/** Copies a matrix y <- x */ +linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + return LINALGERR_OK; } -/** Copies one matrix to another */ -objectmatrixerror matrix_copy(objectmatrix *a, objectmatrix *out) { - if (a->ncols==out->ncols && a->nrows==out->nrows) { - cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +/** Scales a matrix x <- scale * x >*/ +void matrix_scale(objectmatrix *x, double scale) { + cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); } -/** Copies a matrix to another at an arbitrary point */ -objectmatrixerror matrix_copyat(objectmatrix *a, objectmatrix *out, int row0, int col0) { - if (col0+a->ncols<=out->ncols && row0+a->nrows<=out->nrows) { - for (int j=0; jncols; j++) { - for (int i=0; inrows; i++) { - double value; - if (!matrix_getelement(a, i, j, &value)) return MATRIX_BNDS; - if (!matrix_setelement(out, row0+i, col0+j, value)) return MATRIX_BNDS; - } - } - - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +/** Loads the identity matrix a <- I(n) */ +linalgError_t matrix_identity(objectmatrix *x) { + if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; + memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); + for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; + return LINALGERR_OK; } -/** Performs a + b -> out. */ -objectmatrixerror matrix_add(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - if (a->ncols==b->ncols && a->ncols==out->ncols && - a->nrows==b->nrows && a->nrows==out->nrows) { - if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); - cblas_daxpy(a->ncols * a->nrows, 1.0, b->elements, 1, out->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +/** Performs z <- alpha*(x*y) + beta*z */ +linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double beta, objectmatrix *z) { + if (!(x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); + return LINALGERR_OK; } -/** Performs lambda*a + beta -> out. */ -objectmatrixerror matrix_addscalar(objectmatrix *a, double lambda, double beta, objectmatrix *out) { - if (a->ncols==out->ncols && a->nrows==out->nrows) { - for (unsigned int i=0; inrows*out->ncols; i++) { - out->elements[i]=lambda*a->elements[i]+beta; +/** Performs x <- alpha*x + beta */ +linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta) { + for (MatrixCount_t i=0; incols*x->nrows; i++) { + for (int k=0; knvals; k++) { + x->elements[i*x->nvals+k]*=alpha; + if (k==0) x->elements[i*x->nvals+k]+=beta; } - return MATRIX_OK; } - - return MATRIX_INCMPTBLDIM; + return LINALGERR_OK; } -/** Performs a + lambda*b -> a. */ -objectmatrixerror matrix_accumulate(objectmatrix *a, double lambda, objectmatrix *b) { - if (a->ncols==b->ncols && a->nrows==b->nrows ) { - cblas_daxpy(a->ncols * a->nrows, lambda, b->elements, 1, a->elements, 1); - return MATRIX_OK; +/** Performs y <- x^T>*/ +linalgError_t matrix_transpose(objectmatrix *x, objectmatrix *y) { + if (!(x->ncols==y->nrows && x->nrows==y->ncols)) return LINALGERR_INCOMPATIBLE_DIM; + + for (MatrixCount_t i=0; incols; i++) { + for (MatrixCount_t j=0; jnrows; j++) { + for (int k=0; knvals; k++) { + y->elements[j*y->nrows*y->nvals+i*y->nvals+k] = x->elements[i*x->nrows*x->nvals+j*x->nvals+k]; + } + } } - return MATRIX_INCMPTBLDIM; + return LINALGERR_OK; } -/** Performs a - b -> out */ -objectmatrixerror matrix_sub(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - if (a->ncols==b->ncols && a->ncols==out->ncols && - a->nrows==b->nrows && a->nrows==out->nrows) { - if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); - cblas_daxpy(a->ncols * a->nrows, -1.0, b->elements, 1, out->elements, 1); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; +/* ---------------------- + * Unary operations + * ---------------------- */ + +/** Computes various matrix norms */ +double matrix_norm(objectmatrix *a, matrix_norm_t norm) { + return matrix_getinterface(a)->normfn(a, norm); } -/** Performs a * b -> out */ -objectmatrixerror matrix_mul(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - if (a->ncols==b->nrows && a->nrows==out->nrows && b->ncols==out->ncols) { - cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, 1.0, a->elements, a->nrows, b->elements, b->nrows, 0.0, out->elements, out->nrows); - return MATRIX_OK; +/** Computes the sum of all elements in a matrix */ +void matrix_sum(objectmatrix *a, double *sum) { + double c[a->nvals], y, t; + for (int i=0; invals; i++) { sum[i]=0; c[i]=0; } + + for (MatrixCount_t i=0; inels; i+=a->nvals) { + for (int k=0; knvals; k++) { + y=a->elements[i+k]-c[k]; + t=sum[k]+y; + c[k]=(t-sum[k])-y; + sum[k]=t; + } } - return MATRIX_INCMPTBLDIM; } -/** Finds the Frobenius inner product of two matrices */ -objectmatrixerror matrix_inner(objectmatrix *a, objectmatrix *b, double *out) { - if (a->ncols==b->ncols && a->nrows==b->nrows) { - *out=cblas_ddot(a->ncols*a->nrows, a->elements, 1, b->elements, 1); - return MATRIX_OK; +/** Calculate the trace of a matrix */ +linalgError_t matrix_trace(objectmatrix *a, double *out) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + *out = 0.0; + for (int i = 0; i < a->nrows; i++) { + *out += a->elements[a->nvals * (i * a->nrows + i)]; } - return MATRIX_INCMPTBLDIM; + + return LINALGERR_OK; } -/** Computes the outer product of two matrices */ -objectmatrixerror matrix_outer(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - int m=a->nrows*a->ncols, n=b->nrows*b->ncols; - if (m==out->nrows && n==out->ncols) { - cblas_dger(CblasColMajor, m, n, 1, a->elements, 1, b->elements, 1, out->elements, out->nrows); - return MATRIX_OK; - } - return MATRIX_INCMPTBLDIM; -} - -/** Solves the system a.x = b - * @param[in] a lhs - * @param[in] b rhs - * @param[in] out - the solution x - * @param[out] lu - LU decomposition of a; you must provide an array the same size as a. - * @param[out] pivot - you must provide an array with the same number of rows as a. - * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. - * */ -static objectmatrixerror matrix_div(objectmatrix *a, objectmatrix *b, objectmatrix *out, double *lu, int *pivot) { - int n=a->nrows, nrhs = b->ncols, info; +/* ---------------------- + * Binary operations + * ---------------------- */ + +/** Finds the Frobenius inner product of two matrices */ +linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out) { + if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy(a->ncols * a->nrows, a->elements, 1, lu, 1); - if (b!=out) cblas_dcopy(b->ncols * b->nrows, b->elements, 1, out->elements, 1); -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, lu, n, pivot, out->elements, n); -#else - dgesv_(&n, &nrhs, lu, &n, pivot, out->elements, &n, &info); -#endif + *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + return LINALGERR_OK; +} + +/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ +linalgError_t matrix_r1update(double alpha, objectmatrix *a, objectmatrix *b, objectmatrix *c) { + MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; + if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); + cblas_dger(CblasColMajor, m, n, alpha, a->elements, 1, b->elements, 1, c->elements, c->nrows); + return LINALGERR_OK; } -/** Solves the system a.x = b for small matrices (test with MATRIX_ISSMALL) - * @warning Uses the C stack for storage, which avoids malloc but can cause stack overflow */ -objectmatrixerror matrix_divs(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - if (a->ncols==b->nrows && a->ncols == out->nrows) { - int pivot[a->nrows]; - double lu[a->nrows*a->ncols]; - - return matrix_div(a, b, out, lu, pivot); - } - return MATRIX_INCMPTBLDIM; +/** Solve the linear system a.x = b using stack allocated memory for temporary */ +linalgError_t matrix_solvesmall(objectmatrix *a, objectmatrix *b) { + int pivot[a->nrows]; + double els[a->nels]; + objectmatrix A = MORPHO_STATICMATRIX(els, a->nrows, a->ncols); + matrix_copy(a, &A); + return (matrix_getinterface(a)->solvefn) (&A, b, pivot); } -/** Solves the system a.x = b for large matrices (test with MATRIX_ISSMALL) */ -objectmatrixerror matrix_divl(objectmatrix *a, objectmatrix *b, objectmatrix *out) { - objectmatrixerror ret = MATRIX_ALLOC; // Returned if allocation fails - if (!(a->ncols==b->nrows && a->ncols == out->nrows)) return MATRIX_INCMPTBLDIM; - - int *pivot=MORPHO_MALLOC(sizeof(int)*a->nrows); - double *lu=MORPHO_MALLOC(sizeof(double)*a->nrows*a->ncols); - - if (pivot && lu) ret=matrix_div(a, b, out, lu, pivot); - +/** Solve the linear system a.x = b using heap allocated memory for temporary */ +linalgError_t matrix_solvelarge(objectmatrix *a, objectmatrix *b) { + int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); + objectmatrix *A = matrix_clone(a); + linalgError_t out = LINALGERR_ALLOC; + if (pivot && A) { + out = (matrix_getinterface(a)->solvefn) (A, b, pivot); + } + if (A) object_free((object *) A); if (pivot) MORPHO_FREE(pivot); - if (lu) MORPHO_FREE(lu); - - return ret; + return out; +} + +/** Solve the linear system a.x = b; automatrically allocates storage depending on size of the matrix + * @param[in] a lhs + * @param[in|out] b rhs — overwritten by the solution + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ +linalgError_t matrix_solve(objectmatrix *a, objectmatrix *b) { + if (MATRIX_ISSMALL(a)) return matrix_solvesmall(a, b); + else return matrix_solvelarge(a, b); } /** Inverts the matrix a - * @param[in] a lhs - * @param[in] out - the solution x - * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. - * */ -objectmatrixerror matrix_inverse(objectmatrix *a, objectmatrix *out) { + * @param[in] a matrix to be inverted + * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ +linalgError_t matrix_inverse(objectmatrix *a) { int nrows=a->nrows, ncols=a->ncols, info; - if (!(a->ncols==out->nrows && a->ncols == out->nrows)) return MATRIX_INCMPTBLDIM; - int pivot[nrows]; - cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgetrf(LAPACK_COL_MAJOR, nrows, ncols, out->elements, nrows, pivot); + info=LAPACKE_dgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); #else - dgetrf_(&nrows, &ncols, out->elements, &nrows, pivot, &info); + dgetrf_(&nrows, &ncols, a->elements, &nrows, pivot, &info); #endif - - if (info!=0) return (info>0 ? MATRIX_SING : MATRIX_INVLD); + if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgetri(LAPACK_COL_MAJOR, nrows, out->elements, nrows, pivot); + info=LAPACKE_dgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); #else int lwork=nrows*ncols; double work[nrows*ncols]; - dgetri_(&nrows, out->elements, &nrows, pivot, work, &lwork, &info); + dgetri_(&nrows, a->elements, &nrows, pivot, work, &lwork, &info); #endif - return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); + return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); } -/** Compute eigenvalues and eigenvectors of a matrix - * @param[in] a - an objectmatrix to diagonalize of size n - * @param[out] wr - a buffer of size n will hold the real part of the eigenvalues on exit - * @param[out] wi - a buffer of size n will hold the imag part of the eigenvalues on exit - * @param[out] vec - (optional) will be filled out with eigenvectors as columns (should be of size n) - * @returns an error code or MATRIX_OK on success */ -objectmatrixerror matrix_eigensystem(objectmatrix *a, double *wr, double *wi, objectmatrix *vec) { - int info, n=a->nrows; - if (a->nrows!=a->ncols) return MATRIX_NSQ; - if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return MATRIX_INCMPTBLDIM; - - // Copy a to prevent destruction - size_t size = ((size_t) n) * ((size_t) n) * sizeof(double); - double *acopy=MORPHO_MALLOC(size); - if (!acopy) return MATRIX_ALLOC; - cblas_dcopy(n*n, a->elements, 1, acopy, 1); +/** Interface to eigensystem */ +linalgError_t matrix_eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { + if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; + if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return LINALGERR_INCOMPATIBLE_DIM; -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, acopy, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); -#else - int lwork=4*n; double work[4*n]; - dgeev_("N", (vec ? "V" : "N"), &n, acopy, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); -#endif + matrix_eigenfn_t efn = matrix_getinterface(a)->eigenfn; + if (!efn) return LINALGERR_NOT_SUPPORTED; - if (acopy) MORPHO_FREE(acopy); // Free up buffer + objectmatrix *temp = matrix_clone(a); + if (!temp) return LINALGERR_ALLOC; - if (info!=0) return (info>0 ? MATRIX_FAILED : MATRIX_INVLD); - - return MATRIX_OK; + return efn(temp, w, vec); } +/* ---------------------- + * Display + * ---------------------- */ -/** Sums all elements of a matrix using Kahan summation */ -double matrix_sum(objectmatrix *a) { - unsigned int nel=a->ncols*a->nrows; - double sum=0.0, c=0.0, y,t; - - for (unsigned int i=0; ielements[i]-c; - t=sum+y; - c=(t-sum)-y; - sum=t; +/** Prints a matrix */ +void matrix_print(vm *v, objectmatrix *m) { + matrixinterfacedefn *interface=matrix_getinterface(m); + double *elptr; + for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m + morpho_printf(v, "[ "); + for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k + matrix_getelementptr(m, i, j, &elptr); + (*interface->printelfn) (v, elptr); + morpho_printf(v, " "); + } + morpho_printf(v, "]%s", (inrows-1 ? "\n" : "")); } - return sum; } -/** Norms */ - -/** Computes the Frobenius norm of a matrix */ -double matrix_norm(objectmatrix *a) { - double nrm2=cblas_dnrm2(a->ncols*a->nrows, a->elements, 1); - return nrm2; +/** Prints a matrix to a buffer */ +bool matrix_printtobuffer(objectmatrix *m, char *format, varray_char *out) { + matrixinterfacedefn *interface=matrix_getinterface(m); + double *elptr; + for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m + varray_charadd(out, "[ ", 2); + + for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k + matrix_getelementptr(m, i, j, &elptr); + if (!(*interface->printeltobufffn) (out, format, elptr)) return false; + varray_charadd(out, " ", 1); + } + varray_charadd(out, "]", 1); + if (inrows-1) varray_charadd(out, "\n", 1); + } + return true; } -/** Computes the L1 norm of a matrix */ -double matrix_L1norm(objectmatrix *a) { - unsigned int nel=a->ncols*a->nrows; - double sum=0.0, c=0.0, y,t; +/* ---------------------- + * Roll + * ---------------------- */ + +/** Rolls the matrix list */ +static void _rollflat(objectmatrix *a, objectmatrix *b, int nplaces) { + MatrixCount_t N=a->nrows*a->ncols*a->nvals; + MatrixCount_t n = abs(nplaces)*a->nvals; + if (n>N) n = n % N; + MatrixCount_t Np = N - n; // Number of elements to roll - for (unsigned int i=0; ielements[i])-c; - t=sum+y; - c=(t-sum)-y; - sum=t; + if (nplaces<0) { + memcpy(b->matrixdata, a->matrixdata+n, sizeof(double)*Np); + memcpy(b->matrixdata+Np, a->matrixdata, sizeof(double)*n); + } else { + memcpy(b->matrixdata+n, a->matrixdata, sizeof(double)*Np); + if (n>0) memcpy(b->matrixdata, a->matrixdata+Np, sizeof(double)*n); } - return sum; } -/** Computes the Ln norm of a matrix */ -double matrix_Lnnorm(objectmatrix *a, double n) { - unsigned int nel=a->ncols*a->nrows; - double sum=0.0, c=0.0, y,t; - - for (unsigned int i=0; ielements[i],n)-c; - t=sum+y; - c=(t-sum)-y; - sum=t; - } - return pow(sum,1.0/n); +/** Copies a arow from matrix a into brow for matrix b */ +static void _copyrow(objectmatrix *a, MatrixIdx_t arow, objectmatrix *b, MatrixIdx_t brow) { + for (MatrixIdx_t i=0; incols; i++) + memcpy(b->elements+b->nvals*(i*b->nrows+brow), a->elements+a->nvals*(i*a->nrows+arow), sizeof(double)*a->nvals); } -/** Computes the Linf norm of a matrix */ -double matrix_Linfnorm(objectmatrix *a) { - unsigned int nel=a->ncols*a->nrows; - double max=0.0; +/** Rolls a list by a number of elements along a given axis; stores the result in b */ +linalgError_t matrix_roll(objectmatrix *a, int nplaces, int axis, objectmatrix *b) { + if (!(a->nrows==b->nrows && a->ncols==b->ncols && a->nvals==b->nvals)) return LINALGERR_INCOMPATIBLE_DIM; - for (unsigned int i=0; ielements[i]); - if (y>max) max=y; + switch(axis) { + case 0: + for (int i=0; inrows; i++) { + int j = (i+nplaces); + while (j<0) j+=a->nrows; + _copyrow(a, i, b, j % a->nrows); + } + break; + case 1: _rollflat(a, b, nplaces*a->nrows); break; + default: return LINALGERR_NOT_SUPPORTED; } - return max; -} -/** Transpose a matrix */ -objectmatrixerror matrix_transpose(objectmatrix *a, objectmatrix *out) { - if (!(a->ncols==out->nrows && a->nrows == out->ncols)) return MATRIX_INCMPTBLDIM; - - /* Copy elements a column at a time */ - for (unsigned int i=0; incols; i++) { - cblas_dcopy(a->nrows, a->elements+(i*a->nrows), 1, out->elements+i, a->ncols); - } - return MATRIX_OK; + return LINALGERR_OK; } -/** Calculate the trace of a matrix */ -objectmatrixerror matrix_trace(objectmatrix *a, double *out) { - if (a->nrows!=a->ncols) return MATRIX_NSQ; - *out=1.0; - *out=cblas_ddot(a->nrows, a->elements, a->ncols+1, out, 0); +/* ********************************************************************** + * Matrix constructors + * ********************************************************************** */ + +value matrix_constructor__int_int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return MATRIX_OK; + objectmatrix *new=matrix_new(nrows, ncols, true); + return morpho_wrapandbind(v, (object *) new); } -/** Scale a matrix */ -objectmatrixerror matrix_scale(objectmatrix *a, double scale) { - cblas_dscal(a->ncols*a->nrows, scale, a->elements, 1); +value matrix_constructor__int(vm *v, int nargs, value *args) { + MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return MATRIX_OK; + objectmatrix *new=matrix_new(nrows, 1, true); + return morpho_wrapandbind(v, (object *) new); } -/** Load the indentity matrix*/ -objectmatrixerror matrix_identity(objectmatrix *a) { - if (a->ncols!=a->nrows) return MATRIX_NSQ; - memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); - for (int i=0; inrows; i++) a->elements[i+a->nrows*i]=1.0; - return MATRIX_OK; +/** Clones a matrix */ +value matrix_constructor__matrix(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + return morpho_wrapandbind(v, (object *) matrix_clone(a)); } -/** Sets a matrix to zero */ -objectmatrixerror matrix_zero(objectmatrix *a) { - memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); - - return MATRIX_OK; +/** Constructs a matrix from a list of lists or tuples */ +value matrix_constructor__list(vm *v, int nargs, value *args) { + objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_MATRIX, 1); + return morpho_wrapandbind(v, (object *) new); } -/** Prints a matrix */ -void matrix_print(vm *v, objectmatrix *m) { - for (int i=0; inrows; i++) { // Rows run from 0...m - morpho_printf(v, "[ "); - for (int j=0; jncols; j++) { // Columns run from 0...k - double val; - matrix_getelement(m, i, j, &val); - morpho_printf(v, "%g ", (fabs(val)nrows-1 ? "\n" : "")); - } +/** Constructs a matrix from an array */ +value matrix_constructor__array(vm *v, int nargs, value *args) { + objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); + if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } + + objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_MATRIX, 1); + return morpho_wrapandbind(v, (object *) new); } -/** Prints a matrix to a buffer */ -bool matrix_printtobuffer(objectmatrix *m, char *format, varray_char *out) { - for (int i=0; inrows; i++) { // Rows run from 0...m - varray_charadd(out, "[ ", 2); - - for (int j=0; jncols; j++) { // Columns run from 0...k - double val; - matrix_getelement(m, i, j, &val); - if (!format_printtobuffer(MORPHO_FLOAT(val), format, out)) return false; - varray_charadd(out, " ", 1); - } - varray_charadd(out, "]", 1); - if (inrows-1) varray_charadd(out, "\n", 1); - } - return true; +value matrix_constructor__err(vm *v, int nargs, value *args) { + morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); + return MORPHO_NIL; } -/** Matrix eigensystem */ -bool matrix_eigen(vm *v, objectmatrix *a, value *evals, value *evecs) { - double *ev = MORPHO_MALLOC(sizeof(double)*a->nrows*2); // Allocate temporary memory for eigenvalues - double *er=ev, *ei=ev+a->nrows; - - objectmatrix *vecs=NULL; // A new matrix for eigenvectors - objectlist *vallist = object_newlist(0, NULL); // List to hold eigenvalues - bool success=false; - - if (evecs) vecs=object_clonematrix(a); // Clones a to hold eigenvectors - - // Check that everything was allocated correctly - if (!(ev && vallist && (!evecs || vecs))) { - morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto matrix_eigen_cleanup; }; - - objectmatrixerror err=matrix_eigensystem(a, er, ei, vecs); - - if (err!=MATRIX_OK) { - matrix_raiseerror(v, err); - goto matrix_eigen_cleanup; - } - - // Now process the eigenvalues - for (int i=0; inrows; i++) { - if (fabs(ei[i])val.count; i++) { - if (MORPHO_ISOBJECT(vallist->val.data[i])) object_free(MORPHO_GETOBJECT(vallist->val.data[i])); - } - object_free((object *) vallist); - } - if (vecs) object_free((object *) vecs); - } + objectmatrix *new = matrix_new(n,n,false); + if (new) matrix_identity(new); - return success; + return morpho_wrapandbind(v, (object *) new); } /* ********************************************************************** * Matrix veneer class - * ********************************************************************* */ + * ********************************************************************** */ -/** Constructs a Matrix object */ -value matrix_constructor(vm *v, int nargs, value *args) { - unsigned int nrows, ncols; - objectmatrix *new=NULL; - value out=MORPHO_NIL; - - if (nargs==2 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 1)) ) { - nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - new=object_newmatrix(nrows, ncols, true); - } else if (nargs==1 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { - nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - ncols = 1; - new=object_newmatrix(nrows, ncols, true); - } else if (nargs==1 && - MORPHO_ISARRAY(MORPHO_GETARG(args, 0))) { - new=object_matrixfromarray(MORPHO_GETARRAY(MORPHO_GETARG(args, 0))); - if (!new) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); -#ifdef MORPHO_INCLUDE_SPARSE - } else if (nargs==1 && - MORPHO_ISLIST(MORPHO_GETARG(args, 0))) { - new=object_matrixfromlist(MORPHO_GETLIST(MORPHO_GETARG(args, 0))); - if (!new) { - /** Could this be a concatenation operation? */ - objectsparseerror err = sparse_catmatrix(MORPHO_GETLIST(MORPHO_GETARG(args, 0)), &new); - if (err==SPARSE_INVLDINIT) { - morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); - } else if (err!=SPARSE_OK) sparse_raiseerror(v, err); - } -#endif - } else if (nargs==1 && - MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - new=object_clonematrix(MORPHO_GETMATRIX(MORPHO_GETARG(args, 0))); - if (!new) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); -#ifdef MORPHO_INCLUDE_SPARSE - } else if (nargs==1 && - MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { - objectsparseerror err=sparse_tomatrix(MORPHO_GETSPARSE(MORPHO_GETARG(args, 0)), &new); - if (err!=SPARSE_OK) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); -#endif - } else morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); - - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } - - return out; +/* ---------------------- + * Common utility methods + * ---------------------- */ + +/** Prints a matrix */ +value Matrix_print(vm *v, int nargs, value *args) { + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + matrix_print(v, m); + return MORPHO_NIL; } -/** Creates an identity matrix */ -value matrix_identityconstructor(vm *v, int nargs, value *args) { - int n; - objectmatrix *new=NULL; - value out = MORPHO_NIL; - - if (nargs==1 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { - n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - new=object_newmatrix(n, n, false); - if (new) { - matrix_identity(new); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - } else morpho_runtimeerror(v, MATRIX_IDENTCONSTRUCTOR); - - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } +/** Formatted conversion to a string */ +value Matrix_format(vm *v, int nargs, value *args) { + value out=MORPHO_NIL; + varray_char str; + varray_charinit(&str); + + if (matrix_printtobuffer(MORPHO_GETMATRIX(MORPHO_SELF(args)), + MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), + &str)) { + out = object_stringfromvarraychar(&str); + if (MORPHO_ISOBJECT(out)) morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + varray_charclear(&str); return out; } -/** Checks that a matrix is indexed with 2 indices with a generic interface */ -bool matrix_slicedim(value * a, unsigned int ndim){ - if (ndim>2||ndim<0) return false; - return true; +/** Copies the contents of one matrix into another */ +value Matrix_assign(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + LINALG_ERRCHECKVM(matrix_copy(b, a)); + return MORPHO_NIL; } -/** Constucts a new matrix with a generic interface */ -void matrix_sliceconstructor(unsigned int *slicesize,unsigned int ndim,value* out){ - unsigned int numcol = 1; - if (ndim == 2) { - numcol = slicesize[1]; - } - *out = MORPHO_OBJECT(object_newmatrix(slicesize[0],numcol,false)); +/** Clones a matrix */ +value Matrix_clone(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=matrix_clone(a); + return morpho_wrapandbind(v, (object *) new); } -/** Copies data from a at indx to out at newindx with a generic interface */ -objectarrayerror matrix_slicecopy(value * a,value * out, unsigned int ndim, unsigned int *indx,unsigned int *newindx){ - double num; // matrices store doubles; - unsigned int colindx = 0; - unsigned int colnewindx = 0; - - if (ndim == 2) { - colindx = indx[1]; - colnewindx = newindx[1]; - } - if (!(matrix_getelement(MORPHO_GETMATRIX(*a),indx[0],colindx,&num)&& - matrix_setelement(MORPHO_GETMATRIX(*out),newindx[0],colnewindx,num))){ - return ARRAY_OUTOFBOUNDS; - } - return ARRAY_OK; -} +/* --------- + * index() + * --------- */ -/** Rolls the matrix list */ -void matrix_rollflat(objectmatrix *a, objectmatrix *b, int nplaces) { - unsigned int N = a->nrows*a->ncols; - int n = abs(nplaces); - if (n>N) n = n % N; - unsigned int Np = N - n; // Number of elements to roll +value Matrix_index_int_int(vm *v, int nargs, value *args) { + objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + value out=MORPHO_NIL; - if (nplaces<0) { - memcpy(b->matrixdata, a->matrixdata+n, sizeof(double)*Np); - memcpy(b->matrixdata+Np, a->matrixdata, sizeof(double)*n); - } else { - memcpy(b->matrixdata+n, a->matrixdata, sizeof(double)*Np); - if (n>0) memcpy(b->matrixdata, a->matrixdata+Np, sizeof(double)*n); - } + double *elptr=NULL; + LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); + + if (elptr) out=matrix_getinterface(m)->getelfn(v, elptr); + return out; } -/** Copies arow from matrix a into brow for matrix b */ -void matrix_copyrow(objectmatrix *a, int arow, objectmatrix *b, int brow) { - cblas_dcopy(a->ncols, a->elements+arow, a->nrows, b->elements+brow, a->nrows); +static linalgError_t _slice_count(value in, MatrixIdx_t *count) { + if (morpho_isnumber(in)) { *count=1; return LINALGERR_OK; } + else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return LINALGERR_OK; } + return LINALGERR_NON_NUMERICAL; } -/** Rolls a list by a number of elements */ -objectmatrix *matrix_roll(objectmatrix *a, int nplaces, int axis) { - objectmatrix *new=object_newmatrix(a->nrows, a->ncols, false); - - if (new) { - switch(axis) { - case 0: { // TODO: Could probably be faster - for (int i=0; inrows; i++) { - int j = (i+nplaces); - if (j<0) j+=a->nrows; - matrix_copyrow(a, i, new, j % a->nrows); - } - } - break; - case 1: matrix_rollflat(a, new, nplaces*a->nrows); break; +static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { + value val=in; + if (MORPHO_ISRANGE(in)) val=range_iterate(MORPHO_GETRANGE(in), i); + + if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return LINALGERR_OK; } + else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return LINALGERR_OK; } + return LINALGERR_OP_FAILED; +} + +static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { + LINALG_ERRCHECKRETURN(_slice_count(iv, icnt)); + LINALG_ERRCHECKRETURN(_slice_count(jv, jcnt)); + if (*icnt<1 || *jcnt<1) return LINALGERR_INVLD_ARG; + return LINALGERR_OK; +} + +static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx_t jcnt, objectmatrix *a, objectmatrix *b, bool swap) { + double *ael, *bel; + for (MatrixIdx_t j=0; jnvals); + else memcpy(bel, ael, sizeof(double)*b->nvals); } } - - return new; + return LINALGERR_OK; } -/** Gets the matrix element with given indices */ -value Matrix_getindex(vm *v, int nargs, value *args) { - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - unsigned int indx[2]={0,0}; - value out = MORPHO_NIL; - if (nargs>2){ - morpho_runtimeerror(v, MATRIX_INVLDNUMINDICES); - return out; - } - - if (array_valuelisttoindices(nargs, args+1, indx)) { - double outval; - if (!matrix_getelement(m, indx[0], indx[1], &outval)) { - morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); - } else { - out = MORPHO_FLOAT(outval); - } - } else { // now try to get a slice - objectarrayerror err = getslice(&MORPHO_SELF(args), &matrix_slicedim, &matrix_sliceconstructor, &matrix_slicecopy, nargs, &MORPHO_GETARG(args,0), &out); - if (err!=ARRAY_OK) MORPHO_RAISE(v, array_to_matrix_error(err) ); - if (MORPHO_ISOBJECT(out)){ - morpho_bindobjects(v,1,&out); - } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); - } +value Matrix_index_x_x(vm *v, int nargs, value *args) { + objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)), *new=NULL; + value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); + value out=MORPHO_NIL; + + MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix + LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); + + new=matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); + if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } + + linalgError_t err=_slice_copy(iv, jv, icnt, jcnt, m, new, false); + if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); object_free((object *) new); } + else out = morpho_wrapandbind(v, (object *) new); + return out; } -/** Sets the matrix element with given indices */ -value Matrix_setindex(vm *v, int nargs, value *args) { - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - unsigned int indx[2]={0,0}; - - if (array_valuelisttoindices(nargs-1, args+1, indx)) { - double value=0.0; - if (MORPHO_ISFLOAT(args[nargs])) value=MORPHO_GETFLOATVALUE(args[nargs]); - if (MORPHO_ISINTEGER(args[nargs])) value=(double) MORPHO_GETINTEGERVALUE(args[nargs]); +/* --------- + * setindex() + * --------- */ - if (!matrix_setelement(m, indx[0], indx[1], value)) { - morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); - } - } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); - +static void _setindex(vm *v, objectmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { + double *elptr=NULL; + LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); + if (elptr) LINALG_ERRCHECKVM(matrix_getinterface(m)->setelfn(v, in, elptr)); +} + +value Matrix_setindex_int_x(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); return MORPHO_NIL; } -/** Sets the column of a matrix */ -value Matrix_setcolumn(vm *v, int nargs, value *args) { - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - if (nargs==2 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && - MORPHO_ISMATRIX(MORPHO_GETARG(args, 1))) { - unsigned int col = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - objectmatrix *src = MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); - - if (colncols) { - if (src && src->ncols*src->nrows==m->nrows) { - matrix_setcolumn(m, col, src->elements); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); - } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); - +value Matrix_setindex_int_int_x(vm *v, int nargs, value *args) { + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); return MORPHO_NIL; } -/** Gets a column of a matrix */ -value Matrix_getcolumn(vm *v, int nargs, value *args) { - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; +value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { + objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *msrc = MORPHO_GETMATRIX(MORPHO_GETARG(args, 2)); + value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); - if (nargs==1 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { - unsigned int col = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - - if (colncols) { - double *vals; - if (matrix_getcolumn(m, col, &vals)) { - objectmatrix *new=object_matrixfromfloats(m->nrows, 1, vals); - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } - } - } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); - } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); + MatrixIdx_t icnt=0, jcnt=0; + LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); - return out; -} - -/** Prints a matrix */ -value Matrix_print(vm *v, int nargs, value *args) { - value self = MORPHO_SELF(args); - if (!MORPHO_ISMATRIX(self)) return Object_print(v, nargs, args); + LINALG_ERRCHECKVM(_slice_copy(iv, jv, icnt, jcnt, m, msrc, true)); - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - matrix_print(v, m); return MORPHO_NIL; } -/** Formatted conversion to a string */ -value Matrix_format(vm *v, int nargs, value *args) { - value out = MORPHO_NIL; +/* --------- + * column + * --------- */ + +value Matrix_getcolumn_int(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + value out=MORPHO_NIL; - if (nargs==1 && - MORPHO_ISSTRING(MORPHO_GETARG(args, 0))) { - varray_char str; - varray_charinit(&str); - - if (matrix_printtobuffer(MORPHO_GETMATRIX(MORPHO_SELF(args)), - MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), - &str)) { - out = object_stringfromvarraychar(&str); - if (MORPHO_ISOBJECT(out)) morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - - varray_charclear(&str); - } else { - morpho_runtimeerror(v, VALUE_FRMTARG); - } + if (i>=0 && incols) { + objectmatrix *new=matrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); + if (new) matrix_getcolumn(a, i, new); + out=morpho_wrapandbind(v, (object *)new); + } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); return out; } -/** Matrix add */ -value Matrix_assign(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - if (a->ncols==b->ncols && a->nrows==b->nrows) { - matrix_copy(b, a); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } - +value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { + LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETMATRIX(MORPHO_SELF(args)), + MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)))); return MORPHO_NIL; } -/** Matrix add */ -value Matrix_add(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); +/* ---------- + * Arithmetic + * ---------- */ + +/** Add a vector */ +static value _axpy(vm *v, int nargs, value *args, double alpha) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); // Receiver is left hand operand + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); // Argument is right hand operand + objectmatrix *new = NULL; value out=MORPHO_NIL; - - if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - if (a->ncols==b->ncols && a->nrows==b->nrows) { - objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); - if (new) { - out=MORPHO_OBJECT(new); - matrix_add(a, b, new); - } - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { - double val; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &val)) { - objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); - if (new) { - out=MORPHO_OBJECT(new); - matrix_addscalar(a, 1.0, val, new); - } - } - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); - if (!MORPHO_ISNIL(out)) morpho_bindobjects(v, 1, &out); + if (a->ncols==b->ncols && a->nrows==b->nrows) { + new=matrix_clone(a); + if (new) LINALG_ERRCHECKVM(matrix_axpy(alpha, b, new)); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } -/** Right add */ -value Matrix_addr(vm *v, int nargs, value *args) { +/** Add a scalar */ +static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=NULL; value out=MORPHO_NIL; - - if (nargs==1 && (MORPHO_ISNIL(MORPHO_GETARG(args, 0)) || - MORPHO_ISNUMBER(MORPHO_GETARG(args, 0)))) { - int i=0; - if (MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) i=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - if (MORPHO_ISFLOAT(MORPHO_GETARG(args, 0))) i=(fabs(MORPHO_GETFLOATVALUE(MORPHO_GETARG(args, 0)))ncols==b->ncols && a->nrows==b->nrows) { - objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); - if (new) { - out=MORPHO_OBJECT(new); - matrix_sub(a, b, new); - } - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { - double val; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &val)) { - objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); - if (new) { - out=MORPHO_OBJECT(new); - matrix_addscalar(a, 1.0, -val, new); - } - } - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); - - if (!MORPHO_ISNIL(out)) morpho_bindobjects(v, 1, &out); - - return out; +value Matrix_add__matrix(vm *v, int nargs, value *args) { + return _axpy(v,nargs,args,1.0); } -/** Right subtract */ -value Matrix_subr(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - if (nargs==1 && (MORPHO_ISNIL(MORPHO_GETARG(args, 0)) || - MORPHO_ISNUMBER(MORPHO_GETARG(args, 0)))) { - int i=(MORPHO_ISNIL(MORPHO_GETARG(args, 0)) ? 0 : MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0))); +value Matrix_add_nil(vm *v, int nargs, value *args) { + return MORPHO_SELF(args); +} - if (MORPHO_ISFLOAT(MORPHO_GETARG(args, 0))) i=(fabs(MORPHO_GETFLOATVALUE(MORPHO_GETARG(args, 0)))nrows, a->ncols, false); - if (new) { - matrix_addscalar(a, 1.0, -val, new); - // now that did self - arg[0] and we want arg[0] - self so scale the whole thing by -1 - matrix_scale(new, -1.0); - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } - } +value Matrix_sub__matrix(vm *v, int nargs, value *args) { + return _axpy(v,nargs,args,-1.0); +} - } else morpho_runtimeerror(v, VM_INVALIDARGS); - } else morpho_runtimeerror(v, VM_INVALIDARGS); +value Matrix_sub_x(vm *v, int nargs, value *args) { + if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr + return _xpa(v,nargs,args,1.0,-1.0); +} + +value Matrix_subr_x(vm *v, int nargs, value *args) { + return _xpa(v,nargs,args,-1.0,1.0); +} + +value Matrix_mul_float(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - return out; + double scale; + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; + + objectmatrix *new = matrix_clone(a); + if (new) matrix_scale(new, scale); + return morpho_wrapandbind(v, (object *) new); } -/** Matrix multiply */ -value Matrix_mul(vm *v, int nargs, value *args) { +value Matrix_mul__matrix(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; - - if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - if (a->ncols==b->nrows) { - objectmatrix *new = object_newmatrix(a->nrows, b->ncols, false); - if (new) { - out=MORPHO_OBJECT(new); - matrix_mul(a, b, new); - morpho_bindobjects(v, 1, &out); - } - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { - double scale=1.0; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { - objectmatrix *new = object_clonematrix(a); - if (new) { - out=MORPHO_OBJECT(new); - matrix_scale(new, scale); - morpho_bindobjects(v, 1, &out); - } - } -#ifdef MORPHO_INCLUDE_SPARSE - } else if (nargs==1 && MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { - // Returns nil to ensure it gets passed to mulr on Sparse -#endif - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + if (a->ncols==b->nrows) { + objectmatrix *new = matrix_new(a->nrows, b->ncols, false); + if (new) LINALG_ERRCHECKVM(matrix_mmul(1.0, a, b, 0.0, new)); + out = morpho_wrapandbind(v, (object *) new); + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return out; } -/** Called when multiplying on the right */ -value Matrix_mulr(vm *v, int nargs, value *args) { +value Matrix_div_float(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { - double scale=1.0; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { - objectmatrix *new = object_clonematrix(a); - if (new) { - out=MORPHO_OBJECT(new); - matrix_scale(new, scale); - morpho_bindobjects(v, 1, &out); - } - } - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); - return out; + double scale; + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; + scale = 1.0/scale; + if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); + + objectmatrix *new = matrix_clone(a); + if (new) matrix_scale(new, scale); + return morpho_wrapandbind(v, (object *) new); } -/** Solution of linear system a.x = b (i.e. x = b/a) */ -value Matrix_div(vm *v, int nargs, value *args) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - if (a->ncols==b->nrows) { - objectmatrix *new = object_newmatrix(b->nrows, b->ncols, false); - if (new) { - objectmatrixerror err; - if (MATRIX_ISSMALL(a)) { - err=matrix_divs(a, b, new); - } else { - err=matrix_divl(a, b, new); - } - if (err==MATRIX_SING) { - morpho_runtimeerror(v, MATRIX_SINGULAR); - object_free((object *) new); - } else { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } - } - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); -#ifdef MORPHO_INCLUDE_SPARSE - } else if (nargs==1 && MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { - /* Division by a sparse matrix: redirect to the divr selector of Sparse. */ - value vargs[2]={args[1],args[0]}; - return Sparse_divr(v, nargs, vargs); -#endif - } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { - /* Division by a scalar */ - double scale=1.0; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { - if (fabs(scale)ncols==b->ncols && a->nrows==b->nrows) { - out=MORPHO_SELF(args); - double lambda=1.0; - morpho_valuetofloat(MORPHO_GETARG(args, 0), &lambda); - matrix_accumulate(a, lambda, b); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); + + double alpha=1.0; + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } + LINALG_ERRCHECKVM(matrix_axpy(alpha, b, a)); return MORPHO_NIL; } -/** Frobenius inner product */ -value Matrix_inner(vm *v, int nargs, value *args) { +/* ---------------- + * Unary operations + * ---------------- */ + +/** Matrix norm */ +value Matrix_norm_x(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - double prod=0.0; - if (matrix_inner(a, b, &prod)==MATRIX_OK) { - out = MORPHO_FLOAT(prod); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + double n; - return out; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { + if (fabs(n-1.0)nrows*a->ncols, b->nrows*b->ncols, true); - - if (new && - matrix_outer(a, b, new)==MATRIX_OK) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); - - return out; + return MORPHO_FLOAT(matrix_norm(a, MATRIX_NORM_FROBENIUS)); } -/** Matrix sum */ +/** Sums all matrix values */ value Matrix_sum(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - return MORPHO_FLOAT(matrix_sum(a)); + double sum[a->nvals]; + + matrix_sum(a, sum); + return matrix_getinterface(a)->getelfn(v, sum); } -/** Roll a matrix */ -value Matrix_roll(vm *v, int nargs, value *args) { - objectmatrix *slf = MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out = MORPHO_NIL; - int roll, axis=0; +/** Computes the trace */ +value Matrix_trace(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + double out=0.0; + LINALG_ERRCHECKVM(matrix_trace(a, &out)); + return MORPHO_FLOAT(out); +} - if (nargs>0 && - morpho_valuetoint(MORPHO_GETARG(args, 0), &roll)) { - - if (nargs==2 && !morpho_valuetoint(MORPHO_GETARG(args, 1), &axis)) return out; - - objectmatrix *new = matrix_roll(slf, roll, axis); +/** Inverts a matrix */ +value Matrix_transpose(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new = matrix_clone(a); + if (new) { + new->ncols=a->nrows; + new->nrows=a->ncols; + LINALG_ERRCHECKVM(matrix_transpose(a, new)); + } + return morpho_wrapandbind(v, (object *) new); +} - if (new) { - out = MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } +/** Inverts a matrix */ +value Matrix_inverse(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new = matrix_clone(a); + if (new) LINALG_ERRCHECKVM(matrix_inverse(new)); + + return morpho_wrapandbind(v, (object *) new); +} - } else morpho_runtimeerror(v, LIST_ADDARGS); +/* ---------------- + * Eigensystem + * ---------------- */ - return out; +static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { + value ev[n]; + for (int i=0; incols; + MorphoComplex w[n]; + linalgError_t err=matrix_eigen(a, w, NULL); + if (err==LINALGERR_OK) { + if (_processeigenvalues(v, n, w, &out)) { + morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + } else linalg_raiseerror(v, err); return out; } -/** Matrix eigenvalues */ -value Matrix_eigenvalues(vm *v, int nargs, value *args) { +#define _CHK(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _eigensystem_cleanup; } + +/** Finds the eigenvalues and eigenvectors of a matrix */ +value Matrix_eigensystem(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value evals=MORPHO_NIL; - if (matrix_eigen(v, a, &evals, NULL)) { - objectlist *new = MORPHO_GETLIST(evals); - list_append(new, evals); // Ensure we retain the List object - morpho_bindobjects(v, new->val.count, new->val.data); - new->val.count--; // And pop it back off + value ev=MORPHO_NIL; // Will hold eigenvalues + objectmatrix *evec=NULL; // Holds eigenvectors + objecttuple *otuple=NULL; // Tuple to return everything + + MatrixIdx_t n=a->ncols; + MorphoComplex w[n]; + + evec=matrix_clone(a); + _CHK(evec); + + linalgError_t err=matrix_eigen(a, w, evec); + if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto _eigensystem_cleanup; } + + _CHK(_processeigenvalues(v, n, w, &ev)); + + value outtuple[2] = { ev, MORPHO_OBJECT(evec) }; + otuple = object_newtuple(2, outtuple); + _CHK(otuple); + + return morpho_wrapandbind(v, (object *) otuple); + +_eigensystem_cleanup: + if (evec) object_free((object *) evec); + if (otuple) object_free((object *) otuple); + if (MORPHO_ISOBJECT(ev)) { + value evx; + objecttuple *t = MORPHO_GETTUPLE(ev); + for (int i=0; inrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + if (vt && ((a->ncols != vt->nrows) || (a->ncols != vt->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - if (matrix_eigen(v, a, &evals, &evecs)) { - objectlist *evallist = MORPHO_GETLIST(evals); - - list_append(resultlist, evals); // Create the output list - list_append(resultlist, evecs); - out=MORPHO_OBJECT(resultlist); - - list_append(evallist, evals); // Ensure we bind all objects at once - list_append(evallist, evecs); // by popping them onto the evallist. - list_append(evallist, out); // - morpho_bindobjects(v, evallist->val.count, evallist->val.data); - evallist->val.count-=3; // and then popping them back off. - } + objectmatrix *temp = matrix_clone(a); + if (!temp) return LINALGERR_ALLOC; - return out; + linalgError_t err = matrix_getinterface(a)->svdfn (temp, s, u, vt); + object_free((object *) temp); + return err; } -/** Inverts a matrix */ -value Matrix_inverse(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; +/* ---------------- + * QR decomposition + * ---------------- */ - // The inverse will have the number of rows and number of columns - // swapped. - objectmatrix *new = object_newmatrix(a->ncols, a->nrows, false); - if (new) { - objectmatrixerror mi = matrix_inverse(a, new); - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - - if (mi!=MATRIX_OK) matrix_raiseerror(v, mi); - } +/** Interface to QR decomposition */ +linalgError_t matrix_qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { + if (q && ((a->nrows != q->nrows) || (a->nrows != q->ncols))) return LINALGERR_INCOMPATIBLE_DIM; + if (r && ((a->nrows != r->nrows) || (a->ncols != r->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - return out; + objectmatrix *temp = matrix_clone(a); + if (!temp) return LINALGERR_ALLOC; + + linalgError_t err = matrix_getinterface(a)->qrfn (temp, q, r); + object_free((object *) temp); + return err; } -/** Transpose of a matrix */ -value Matrix_transpose(vm *v, int nargs, value *args) { +/** Processes singular values into a tuple */ +static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) { + value sv[n]; + for (int i = 0; i < n; i++) sv[i] = MORPHO_FLOAT(s[i]); + + objecttuple *new = object_newtuple(n, sv); + if (!new) return false; + + *out = MORPHO_OBJECT(new); + return true; +} + +#define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } +/** Singular Value Decomposition */ +value Matrix_svd(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); + + value s = MORPHO_NIL; // Will hold singular values + objectmatrix *u = NULL; // Left singular vectors + objectmatrix *vt = NULL; // Right singular vectors (transposed) + objecttuple *otuple = NULL; // Tuple to return everything + + MatrixIdx_t m = a->nrows, n = a->ncols; + MatrixIdx_t minmn = (m < n) ? m : n; + double singular_values[minmn]; + + // Allocate U (m×m) and VT (n×n) matrices + u = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); + _CHK_SVD(u); + + vt = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), n, n, a->nvals, false); + _CHK_SVD(vt); + + linalgError_t err = matrix_svd(a, singular_values, u, vt); + if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _svd_cleanup; } + + _CHK_SVD(_processsingularvalues(v, minmn, singular_values, &s)); + + value outtuple[3] = { MORPHO_OBJECT(u), s, MORPHO_OBJECT(vt) }; + otuple = object_newtuple(3, outtuple); + _CHK_SVD(otuple); + + return morpho_wrapandbind(v, (object *) otuple); + +_svd_cleanup: + if (u) object_free((object *) u); + if (vt) object_free((object *) vt); + if (otuple) object_free((object *) otuple); + morpho_freeobject(s); + + return MORPHO_NIL; +} +#undef _CHK_SVD + +/* ---------------- + * QR decomposition + * ---------------- */ + +#define _CHK_QR(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _qr_cleanup; } +/** QR Decomposition */ +value Matrix_qr(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); + + objectmatrix *q = NULL; // Orthogonal matrix Q + objectmatrix *r = NULL; // Upper triangular matrix R + objecttuple *otuple = NULL; // Tuple to return everything + + MatrixIdx_t m = a->nrows, n = a->ncols; + + // Allocate Q (m×m) and R (m×n) matrices + q = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); + _CHK_QR(q); + + r = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, n, a->nvals, false); + _CHK_QR(r); + + linalgError_t err = matrix_qr(a, q, r); + if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _qr_cleanup; } + + value outtuple[2] = { MORPHO_OBJECT(q), MORPHO_OBJECT(r) }; + otuple = object_newtuple(2, outtuple); + _CHK_QR(otuple); + + return morpho_wrapandbind(v, (object *) otuple); + +_qr_cleanup: + if (q) object_free((object *) q); + if (r) object_free((object *) r); + if (otuple) object_free((object *) otuple); + + return MORPHO_NIL; +} +#undef _CHK_QR + +/* --------- + * Products + * --------- */ + +/** Frobenius inner product */ +value Matrix_inner(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - objectmatrix *new = object_newmatrix(a->ncols, a->nrows, false); - if (new) { - matrix_transpose(a, new); - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + double prod=0.0; - return out; + LINALG_ERRCHECKVM(matrix_inner(a, b, &prod)); + + return MORPHO_FLOAT(prod); } +/** Outer product */ +value Matrix_outer(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + objectmatrix *new=matrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); + if (new) LINALG_ERRCHECKVM(matrix_r1update(1.0, a, b, new)); + + return morpho_wrapandbind(v, (object *) new); +} + +/* --------- + * Metadata + * --------- */ + /** Reshape a matrix */ value Matrix_reshape(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - if (nargs==2 && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && - MORPHO_ISINTEGER(MORPHO_GETARG(args, 1))) { - int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - - if (nrows*ncols==a->nrows*a->ncols) { - a->nrows=nrows; - a->ncols=ncols; - } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); - } else morpho_runtimeerror(v, MATRIX_RESHAPEARGS); + if (nrows*ncols==a->nrows*a->ncols) { + a->nrows=nrows; + a->ncols=ncols; + } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } -/** Trace of a matrix */ -value Matrix_trace(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; +static value _roll(vm *v, objectmatrix *a, int roll, int axis) { + objectmatrix *new = matrix_clone(a); + if (new) matrix_roll(a, roll, axis, new); + return morpho_wrapandbind(v, (object *) new); +} - if (a->nrows==a->ncols) { - double tr; - if (matrix_trace(a, &tr)==MATRIX_OK) out=MORPHO_FLOAT(tr); - } else { - morpho_runtimeerror(v, MATRIX_NOTSQ); - } - - return out; +/** Roll a matrix */ +value Matrix_roll_int_int(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); + int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), + axis = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + return _roll(v, a, roll, axis); +} + +/** Roll a matrix by row */ +value Matrix_roll_int(vm *v, int nargs, value *args) { + objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); + int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + return _roll(v, a, roll, 0); } /** Enumerate protocol */ value Matrix_enumerate(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; - if (nargs==1) { - if (MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { - int i=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - - if (i<0) out=MORPHO_INTEGER(a->ncols*a->nrows); - else if (incols*a->nrows) out=MORPHO_FLOAT(a->elements[i]); - } + if (i<0) { + out=MORPHO_INTEGER(a->ncols*a->nrows); + } else if (incols*a->nrows) { + out=matrix_getinterface(a)->getelfn(v, a->elements+i*a->nvals); + } else { + linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); } return out; } - /** Number of matrix elements */ value Matrix_count(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - return MORPHO_INTEGER(a->ncols*a->nrows); } /** Matrix dimensions */ value Matrix_dimensions(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value dim[2]; - value out=MORPHO_NIL; - dim[0]=MORPHO_INTEGER(a->nrows); - dim[1]=MORPHO_INTEGER(a->ncols); + value dim[2] = { MORPHO_INTEGER(a->nrows), MORPHO_INTEGER(a->ncols) }; + objecttuple *new=object_newtuple(2, dim); - objectlist *new=object_newlist(2, dim); - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - - return out; -} - -/** Clones a matrix */ -value Matrix_clone(vm *v, int nargs, value *args) { - value out=MORPHO_NIL; - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new=object_clonematrix(a); - if (new) { - out=MORPHO_OBJECT(new); - morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - return out; + return morpho_wrapandbind(v, (object *) new); } MORPHO_BEGINCLASS(Matrix) -MORPHO_METHOD(MORPHO_GETINDEX_METHOD, Matrix_getindex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_SETINDEX_METHOD, Matrix_setindex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_GETCOLUMN_METHOD, Matrix_getcolumn, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_SETCOLUMN_METHOD, Matrix_setcolumn, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_PRINT_METHOD, Matrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_FORMAT_METHOD, Matrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_ASSIGN_METHOD, Matrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_addr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_MUL_METHOD, Matrix_mul, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_MULR_METHOD, Matrix_mulr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_DIV_METHOD, Matrix_div, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_ACC_METHOD, Matrix_acc, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_INNER_METHOD, Matrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_OUTER_METHOD, Matrix_outer, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_SUM_METHOD, Matrix_sum, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_NORM_METHOD, Matrix_norm, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_INVERSE_METHOD, Matrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_TRANSPOSE_METHOD, Matrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_RESHAPE_METHOD, Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_EIGENVALUES_METHOD, Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_EIGENSYSTEM_METHOD, Matrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_TRACE_METHOD, Matrix_trace, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_ENUMERATE_METHOD, Matrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_COUNT_METHOD, Matrix_count, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MATRIX_DIMENSIONS_METHOD, Matrix_dimensions, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_ROLL_METHOD, Matrix_roll, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD(MORPHO_CLONE_METHOD, Matrix_clone, BUILTIN_FLAGSEMPTY) +MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(Matrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "Matrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index_int_int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Matrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Matrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (Matrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (Matrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, Matrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "Matrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", Matrix_sum, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Float ()", Matrix_trace, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "Matrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Float (Matrix)", Matrix_inner, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "Matrix (Matrix)", Matrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS /* ********************************************************************** * Initialization - * ********************************************************************* */ + * ********************************************************************** */ void matrix_initialize(void) { objectmatrixtype=object_addtype(&objectmatrixdefn); - - builtin_addfunction(MATRIX_CLASSNAME, matrix_constructor, MORPHO_FN_CONSTRUCTOR); - builtin_addfunction(MATRIX_IDENTITYCONSTRUCTOR, matrix_identityconstructor, BUILTIN_FLAGSEMPTY); + matrix_addinterface(&matrixdefn); objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); @@ -1566,20 +1474,15 @@ void matrix_initialize(void) { value matrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(Matrix), objclass); object_setveneerclass(OBJECT_MATRIX, matrixclass); - morpho_defineerror(MATRIX_INDICESOUTSIDEBOUNDS, ERROR_HALT, MATRIX_INDICESOUTSIDEBOUNDS_MSG); - morpho_defineerror(MATRIX_INVLDINDICES, ERROR_HALT, MATRIX_INVLDINDICES_MSG); - morpho_defineerror(MATRIX_INVLDNUMINDICES, ERROR_HALT, MATRIX_INVLDNUMINDICES_MSG); - morpho_defineerror(MATRIX_CONSTRUCTOR, ERROR_HALT, MATRIX_CONSTRUCTOR_MSG); - morpho_defineerror(MATRIX_INVLDARRAYINIT, ERROR_HALT, MATRIX_INVLDARRAYINIT_MSG); - morpho_defineerror(MATRIX_ARITHARGS, ERROR_HALT, MATRIX_ARITHARGS_MSG); - morpho_defineerror(MATRIX_RESHAPEARGS, ERROR_HALT, MATRIX_RESHAPEARGS_MSG); - morpho_defineerror(MATRIX_INCOMPATIBLEMATRICES, ERROR_HALT, MATRIX_INCOMPATIBLEMATRICES_MSG); - morpho_defineerror(MATRIX_SINGULAR, ERROR_HALT, MATRIX_SINGULAR_MSG); - morpho_defineerror(MATRIX_NOTSQ, ERROR_HALT, MATRIX_NOTSQ_MSG); - morpho_defineerror(MATRIX_OPFAILED, ERROR_HALT, MATRIX_OPFAILED_MSG); - morpho_defineerror(MATRIX_SETCOLARGS, ERROR_HALT, MATRIX_SETCOLARGS_MSG); - morpho_defineerror(MATRIX_NORMARGS, ERROR_HALT, MATRIX_NORMARGS_MSG); - morpho_defineerror(MATRIX_IDENTCONSTRUCTOR, ERROR_HALT, MATRIX_IDENTCONSTRUCTOR_MSG); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Matrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); + + morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + + complematrix_initialize(); } - -#endif diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index fe74a515..7fa15bd3 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -1,44 +1,26 @@ /** @file matrix.h * @author T J Atherton * - * @brief Veneer class over the objectmatrix type that interfaces with blas and lapack - */ + * @brief New linear algebra library +*/ #ifndef matrix_h #define matrix_h -#include "build.h" -#ifdef MORPHO_INCLUDE_LINALG - -#include -#include "classes.h" -/** Use Apple's Accelerate library for LAPACK and BLAS */ -#ifdef __APPLE__ -#ifdef MORPHO_LINALG_USE_ACCELERATE -#define ACCELERATE_NEW_LAPACK -#include -#define MATRIX_LAPACK_PRESENT -#endif -#endif - -/** Otherwise, use LAPACKE */ -#ifndef MATRIX_LAPACK_PRESENT -#include -#include -#define MORPHO_LINALG_USE_LAPACKE -#define MATRIX_LAPACK_PRESENT -#endif - -#include "cmplx.h" -#include "list.h" +#define LINALG_MAXMATRIXDEFNS 4 /* ------------------------------------------------------- - * Matrix objects + * Matrix object type * ------------------------------------------------------- */ extern objecttype objectmatrixtype; #define OBJECT_MATRIX objectmatrixtype +extern objecttypedefn objectmatrixdefn; + +typedef int MatrixIdx_t; // Type used for matrix indices +typedef size_t MatrixCount_t; // Type used to count total number of elements + /** Matrices are a purely numerical collection type oriented toward linear algebra. Elements are stored in column-major format, i.e. [ 1 2 ] @@ -47,8 +29,10 @@ extern objecttype objectmatrixtype; typedef struct { object obj; - unsigned int nrows; - unsigned int ncols; + MatrixIdx_t nrows; // Number of rows + MatrixIdx_t ncols; // Number of columns + MatrixIdx_t nvals; // Number of doubles per entry + MatrixCount_t nels; // Total number of entries (nrows*ncols*nvals) double *elements; double matrixdata[]; } objectmatrix; @@ -59,147 +43,194 @@ typedef struct { /** Gets the object as an matrix */ #define MORPHO_GETMATRIX(val) ((objectmatrix *) MORPHO_GETOBJECT(val)) -/** Creates a matrix object */ -objectmatrix *object_newmatrix(unsigned int nrows, unsigned int ncols, bool zero); - -/** Creates a new matrix from an array */ -objectmatrix *object_matrixfromarray(objectarray *array); - -/** Creates a new matrix from an existing matrix */ -objectmatrix *object_clonematrix(objectmatrix *array); - /** @brief Use to create static matrices on the C stack @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ -#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc } +#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } /** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ #define MATRIX_ISSMALL(m) (m->nrows*m->ncols +#include + +/* ------------------------------------------------------- + * objectmatrixerror type + * ------------------------------------------------------- */ + +typedef enum { + LINALGERR_OK, // Operation performed correctly + LINALGERR_INCOMPATIBLE_DIM, // Matrices have incompatible dimensions, e.g. for multiplication + LINALGERR_INDX_OUT_OF_BNDS, // Index out of bounds, e.g. for access. + LINALGERR_MATRIX_SINGULAR, // Matrix is singular + LINALGERR_NOT_SQUARE, // Matrix is required to be square for this algorithm + LINALGERR_LAPACK_INVLD_ARGS, // Invalid arguments to LAPACK routine + LINALGERR_OP_FAILED, // Matrix operation failed + LINALGERR_NOT_SUPPORTED, // Operation not supported for this matrix type + LINALGERR_NON_NUMERICAL, // Non numerical args supplied + LINALGERR_INVLD_ARG, // Invalid argument supplied + LINALGERR_ALLOC // Memory allocation failed +} linalgError_t; + +/* ------------------------------------------------------- + * Errors + * ------------------------------------------------------- */ + +#define LINALG_INCOMPATIBLEMATRICES "LnAlgMtrxIncmptbl" +#define LINALG_INCOMPATIBLEMATRICES_MSG "Matrices have incompatible shape." + +#define LINALG_INDICESOUTSIDEBOUNDS "LnAlgMtrxIndxBnds" +#define LINALG_INDICESOUTSIDEBOUNDS_MSG "Matrix index out of bounds." + +#define LINALG_SINGULAR "LnAlgMtrxSnglr" +#define LINALG_SINGULAR_MSG "Matrix is singular." + +#define LINALG_NOTSQ "LnAlgMtrxNtSq" +#define LINALG_NOTSQ_MSG "Matrix is not square." + +#define LINALG_LAPACK_ARGS "LnAlgLapackArgs" +#define LINALG_LAPACK_ARGS_MSG "Lapack function called with invalid arguments." + +#define LINALG_OPFAILED "LnAlgMtrxOpFld" +#define LINALG_OPFAILED_MSG "Matrix operation failed." + +#define LINALG_NOTSUPPORTED "LnAlgMtrxNtSpprtd" +#define LINALG_NOTSUPPORTED_MSG "Operation not supported for this matrix type." + +#define LINALG_INVLDARGS "LnAlgMtrxInvldArg" +#define LINALG_INVLDARGS_MSG "Invalid arguments to matrix method." + +#define LINALG_NNNMRCL_ARG "LnAlgMtrxNnNmrclArg" +#define LINALG_NNNMRCL_ARG_MSG "Matrix method requires numerical arguments." + +#define LINALG_NORMARGS "LnAlgMtrxNrmArgs" +#define LINALG_NORMARGS_MSG "Method 'norm' requires a supported argument: 1 or inf." + +/* ------------------------------------------------------- + * Interface + * ------------------------------------------------------- */ + +void linalg_raiseerror(vm *v, linalgError_t err); + +/** Macros to simplify error checking: + - evaluates expression f that returns linalgError_t; + - if an error occurred, raises the corresponding error in a vm called v */ +#define LINALG_ERRCHECKVM(f) { linalgError_t err = f; if (err!=LINALGERR_OK) linalg_raiseerror(v, err); } + +/** As for LINALG_ERRCHECKVM but additionally jumps to a given label */ +#define LINALG_ERRCHECKVMGOTO(f, label) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto label; }} + +/** As for LINALG_ERRCHECKVM but additionally returnsl */ +#define LINALG_ERRCHECKVMRETURN(f, ret) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); return ret; }} + +/** Similar to the above, except returns the error rather than raising it */ +#define LINALG_ERRCHECKRETURN(f) { linalgError_t err = f; if (err!=LINALGERR_OK) return err; } + +/* ------------------------------------------------------- + * Include the rest of the library + * ------------------------------------------------------- */ + +#include "matrix.h" +#include "complexmatrix.h" + +#endif diff --git a/src/linalg/xmatrix.c b/src/linalg/xmatrix.c new file mode 100644 index 00000000..b71e1aed --- /dev/null +++ b/src/linalg/xmatrix.c @@ -0,0 +1,1585 @@ +/** @file matrix.c + * @author T J Atherton + * + * @brief Veneer class over the objectmatrix type that interfaces with blas and lapack + */ + +#include "build.h" +#ifdef MORPHO_INCLUDE_LINALG + +#include +#include "morpho.h" +#include "classes.h" + +#include "matrix.h" +#include "sparse.h" +#include "format.h" + +/* ********************************************************************** + * Matrix objects + * ********************************************************************** */ + +objecttype objectmatrixtype; + +/** Function object definitions */ +size_t objectmatrix_sizefn(object *obj) { + return sizeof(objectmatrix)+sizeof(double) * + ((objectmatrix *) obj)->ncols * + ((objectmatrix *) obj)->nrows; +} + +void objectmatrix_printfn(object *obj, void *v) { + morpho_printf(v, ""); +} + +objecttypedefn objectmatrixdefn = { + .printfn=objectmatrix_printfn, + .markfn=NULL, + .freefn=NULL, + .sizefn=objectmatrix_sizefn, + .hashfn=NULL, + .cmpfn=NULL +}; + +/** Creates a matrix object */ +objectmatrix *object_newmatrix(unsigned int nrows, unsigned int ncols, bool zero) { + unsigned int nel = nrows*ncols; + objectmatrix *new = (objectmatrix *) object_new(sizeof(objectmatrix)+nel*sizeof(double), OBJECT_MATRIX); + + if (new) { + new->ncols=ncols; + new->nrows=nrows; + new->elements=new->matrixdata; + if (zero) { + memset(new->elements, 0, sizeof(double)*nel); + } + } + + return new; +} + +/* ********************************************************************** + * Other constructors + * ********************************************************************** */ + +/* + * Create matrices from array objects + */ + +void matrix_raiseerror(vm *v, objectmatrixerror err) { + switch(err) { + case MATRIX_OK: break; + case MATRIX_INCMPTBLDIM: morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); break; + case MATRIX_SING: morpho_runtimeerror(v, MATRIX_SINGULAR); break; + case MATRIX_INVLD: morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); break; + case MATRIX_BNDS: morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); break; + case MATRIX_NSQ: morpho_runtimeerror(v, MATRIX_NOTSQ); break; + case MATRIX_FAILED: morpho_runtimeerror(v, MATRIX_OPFAILED); break; + case MATRIX_ALLOC: morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); break; + } +} + +/** Recurses into an objectarray to find the dimensions of the array and all child arrays + * @param[in] array - to search + * @param[out] dim - array of dimensions to be filled out (must be zero'd before initial call) + * @param[in] maxdim - maximum number of dimensions + * @param[out] ndim - number of dimensions of the array */ +bool matrix_getarraydimensions(objectarray *array, unsigned int dim[], unsigned int maxdim, unsigned int *ndim) { + unsigned int n=0, m=0; + for (n=0; nndim; n++) { + int k=MORPHO_GETINTEGERVALUE(array->data[n]); + if (k>dim[n]) dim[n]=k; + } + + if (maxdimndim) return false; + + for (unsigned int i=array->ndim; indim+array->nelements; i++) { + if (MORPHO_ISARRAY(array->data[i])) { + if (!matrix_getarraydimensions(MORPHO_GETARRAY(array->data[i]), dim+n, maxdim-n, &m)) return false; + } + } + *ndim=n+m; + + return true; +} + +/** Looks up an array element recursively if necessary */ +value matrix_getarrayelement(objectarray *array, unsigned int ndim, unsigned int *indx) { + unsigned int na=array->ndim; + value out; + + if (array_getelement(array, na, indx, &out)==ARRAY_OK) { + if (ndim==na) return out; + if (MORPHO_ISARRAY(out)) { + return matrix_getarrayelement(MORPHO_GETARRAY(out), ndim-na, indx+na); + } + } + + return MORPHO_NIL; +} + +/** Creates a new array from a list of values */ +objectmatrix *object_matrixfromarray(objectarray *array) { + unsigned int dim[2]={0,1}; // The 1 is to allow for vector arrays. + unsigned int ndim=0; + objectmatrix *ret=NULL; + + if (matrix_getarraydimensions(array, dim, 2, &ndim)) { + ret=object_newmatrix(dim[0], dim[1], true); + } + + unsigned int indx[2]; + if (ret) for (unsigned int i=0; ielements[j*dim[0]+i]); + } else if (!MORPHO_ISNIL(f)) { + object_free((object *) ret); return NULL; + } + } + } + + return ret; +} + +/* + * Create matrices from lists + */ + +/** Recurses into an objectlist to find the dimensions of the array and all child arrays + * @param[in] list - to search + * @param[out] dim - array of dimensions to be filled out (must be zero'd before initial call) + * @param[in] maxdim - maximum number of dimensions + * @param[out] ndim - number of dimensions of the array */ +bool matrix_getlistdimensions(objectlist *list, unsigned int dim[], unsigned int maxdim, unsigned int *ndim) { + unsigned int m=0; + + if (maxdim==0) return false; + + /* Store the length */ + if (list->val.count>dim[0]) dim[0]=list->val.count; + + for (unsigned int i=0; ival.count; i++) { + if (MORPHO_ISLIST(list->val.data[i]) && maxdim>0) { + matrix_getlistdimensions(MORPHO_GETLIST(list->val.data[i]), dim+1, maxdim-1, &m); + } + } + *ndim=m+1; + + return true; +} + +/** Gets a matrix element from a (potentially nested) list. */ +bool matrix_getlistelement(objectlist *list, unsigned int ndim, unsigned int *indx, value *val) { + value out=MORPHO_NIL; + objectlist *l=list; + for (unsigned int i=0; ival.count) { + out=l->val.data[indx[i]]; + if (i2) return false; + + unsigned int indx[2]; + if (ret) for (unsigned int i=0; ielements[j*dim[0]+i]); + } else { + object_free((object *) ret); + return NULL; + } + } + } + + return ret; +} + +/** Creates a matrix from a list of floats */ +objectmatrix *object_matrixfromfloats(unsigned int nrows, unsigned int ncols, double *list) { + objectmatrix *ret=NULL; + + ret=object_newmatrix(nrows, ncols, true); + if (ret) cblas_dcopy(ncols*nrows, list, 1, ret->elements, 1); + + return ret; +} + +/* + * Clone matrices + */ + +/** Clone a matrix */ +objectmatrix *object_clonematrix(objectmatrix *in) { + objectmatrix *new = object_newmatrix(in->nrows, in->ncols, false); + + if (new) { + cblas_dcopy(in->ncols * in->nrows, in->elements, 1, new->elements, 1); + } + + return new; +} + +/* ********************************************************************** + * Matrix operations + * ********************************************************************* */ + +/** @brief Sets a matrix element. + @returns true if the element is in the range of the matrix, false otherwise */ +bool matrix_setelement(objectmatrix *matrix, unsigned int row, unsigned int col, double value) { + if (colncols && rownrows) { + matrix->elements[col*matrix->nrows+row]=value; + return true; + } + return false; +} + +/** @brief Gets a matrix element + * @returns true if the element is in the range of the matrix, false otherwise */ +bool matrix_getelement(objectmatrix *matrix, unsigned int row, unsigned int col, double *value) { + if (colncols && rownrows) { + if (value) *value=matrix->elements[col*matrix->nrows+row]; + return true; + } + return false; +} + +/** @brief Gets a column's entries + * @param[in] matrix - the matrix + * @param[in] col - column number + * @param[out] v - column entries (matrix->nrows in number) + * @returns true if the element is in the range of the matrix, false otherwise */ +bool matrix_getcolumn(objectmatrix *matrix, unsigned int col, double **v) { + if (colncols) { + *v=&matrix->elements[col*matrix->nrows]; + return true; + } + return false; +} + +/** @brief Sets a column's entries + * @param[in] matrix - the matrix + * @param[in] col - column number + * @param[in] v - column entries (matrix->nrows in number) + * @returns true if the element is in the range of the matrix, false otherwise */ +bool matrix_setcolumn(objectmatrix *matrix, unsigned int col, double *v) { + if (colncols) { + cblas_dcopy(matrix->nrows, v, 1, &matrix->elements[col*matrix->nrows], 1); + return true; + } + return false; +} + +/** @brief Add a vector to a column in a matrix + * @param[in] m - the matrix + * @param[in] col - column number + * @param[in] alpha - scale + * @param[out] v - column entries (matrix->nrows in number) [should have m->nrows entries] + * @returns true on success */ +bool matrix_addtocolumn(objectmatrix *m, unsigned int col, double alpha, double *v) { + if (colncols) { + cblas_daxpy(m->nrows, alpha, v, 1, &m->elements[col*m->nrows], 1); + return true; + } + return false; +} + +/* ********************************************************************** + * Matrix arithmetic + * ********************************************************************* */ + +/** Copies one matrix to another */ +unsigned int matrix_countdof(objectmatrix *a) { + return a->ncols*a->nrows; +} + +/** Copies one matrix to another */ +objectmatrixerror matrix_copy(objectmatrix *a, objectmatrix *out) { + if (a->ncols==out->ncols && a->nrows==out->nrows) { + cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Copies a matrix to another at an arbitrary point */ +objectmatrixerror matrix_copyat(objectmatrix *a, objectmatrix *out, int row0, int col0) { + if (col0+a->ncols<=out->ncols && row0+a->nrows<=out->nrows) { + for (int j=0; jncols; j++) { + for (int i=0; inrows; i++) { + double value; + if (!matrix_getelement(a, i, j, &value)) return MATRIX_BNDS; + if (!matrix_setelement(out, row0+i, col0+j, value)) return MATRIX_BNDS; + } + } + + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Performs a + b -> out. */ +objectmatrixerror matrix_add(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + if (a->ncols==b->ncols && a->ncols==out->ncols && + a->nrows==b->nrows && a->nrows==out->nrows) { + if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); + cblas_daxpy(a->ncols * a->nrows, 1.0, b->elements, 1, out->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Performs lambda*a + beta -> out. */ +objectmatrixerror matrix_addscalar(objectmatrix *a, double lambda, double beta, objectmatrix *out) { + if (a->ncols==out->ncols && a->nrows==out->nrows) { + for (unsigned int i=0; inrows*out->ncols; i++) { + out->elements[i]=lambda*a->elements[i]+beta; + } + return MATRIX_OK; + } + + return MATRIX_INCMPTBLDIM; +} + +/** Performs a + lambda*b -> a. */ +objectmatrixerror matrix_accumulate(objectmatrix *a, double lambda, objectmatrix *b) { + if (a->ncols==b->ncols && a->nrows==b->nrows ) { + cblas_daxpy(a->ncols * a->nrows, lambda, b->elements, 1, a->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Performs a - b -> out */ +objectmatrixerror matrix_sub(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + if (a->ncols==b->ncols && a->ncols==out->ncols && + a->nrows==b->nrows && a->nrows==out->nrows) { + if (a!=out) cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); + cblas_daxpy(a->ncols * a->nrows, -1.0, b->elements, 1, out->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Performs a * b -> out */ +objectmatrixerror matrix_mul(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + if (a->ncols==b->nrows && a->nrows==out->nrows && b->ncols==out->ncols) { + cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, 1.0, a->elements, a->nrows, b->elements, b->nrows, 0.0, out->elements, out->nrows); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Finds the Frobenius inner product of two matrices */ +objectmatrixerror matrix_inner(objectmatrix *a, objectmatrix *b, double *out) { + if (a->ncols==b->ncols && a->nrows==b->nrows) { + *out=cblas_ddot(a->ncols*a->nrows, a->elements, 1, b->elements, 1); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Computes the outer product of two matrices */ +objectmatrixerror matrix_outer(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + int m=a->nrows*a->ncols, n=b->nrows*b->ncols; + if (m==out->nrows && n==out->ncols) { + cblas_dger(CblasColMajor, m, n, 1, a->elements, 1, b->elements, 1, out->elements, out->nrows); + return MATRIX_OK; + } + return MATRIX_INCMPTBLDIM; +} + +/** Solves the system a.x = b + * @param[in] a lhs + * @param[in] b rhs + * @param[in] out - the solution x + * @param[out] lu - LU decomposition of a; you must provide an array the same size as a. + * @param[out] pivot - you must provide an array with the same number of rows as a. + * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. + * */ +static objectmatrixerror matrix_div(objectmatrix *a, objectmatrix *b, objectmatrix *out, double *lu, int *pivot) { + int n=a->nrows, nrhs = b->ncols, info; + + cblas_dcopy(a->ncols * a->nrows, a->elements, 1, lu, 1); + if (b!=out) cblas_dcopy(b->ncols * b->nrows, b->elements, 1, out->elements, 1); +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, lu, n, pivot, out->elements, n); +#else + dgesv_(&n, &nrhs, lu, &n, pivot, out->elements, &n, &info); +#endif + + return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); +} + +/** Solves the system a.x = b for small matrices (test with MATRIX_ISSMALL) + * @warning Uses the C stack for storage, which avoids malloc but can cause stack overflow */ +objectmatrixerror matrix_divs(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + if (a->ncols==b->nrows && a->ncols == out->nrows) { + int pivot[a->nrows]; + double lu[a->nrows*a->ncols]; + + return matrix_div(a, b, out, lu, pivot); + } + return MATRIX_INCMPTBLDIM; +} + +/** Solves the system a.x = b for large matrices (test with MATRIX_ISSMALL) */ +objectmatrixerror matrix_divl(objectmatrix *a, objectmatrix *b, objectmatrix *out) { + objectmatrixerror ret = MATRIX_ALLOC; // Returned if allocation fails + if (!(a->ncols==b->nrows && a->ncols == out->nrows)) return MATRIX_INCMPTBLDIM; + + int *pivot=MORPHO_MALLOC(sizeof(int)*a->nrows); + double *lu=MORPHO_MALLOC(sizeof(double)*a->nrows*a->ncols); + + if (pivot && lu) ret=matrix_div(a, b, out, lu, pivot); + + if (pivot) MORPHO_FREE(pivot); + if (lu) MORPHO_FREE(lu); + + return ret; +} + +/** Inverts the matrix a + * @param[in] a lhs + * @param[in] out - the solution x + * @returns objectmatrixerror indicating the status; MATRIX_OK indicates success. + * */ +objectmatrixerror matrix_inverse(objectmatrix *a, objectmatrix *out) { + int nrows=a->nrows, ncols=a->ncols, info; + if (!(a->ncols==out->nrows && a->ncols == out->nrows)) return MATRIX_INCMPTBLDIM; + + int pivot[nrows]; + + cblas_dcopy(a->ncols * a->nrows, a->elements, 1, out->elements, 1); +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgetrf(LAPACK_COL_MAJOR, nrows, ncols, out->elements, nrows, pivot); +#else + dgetrf_(&nrows, &ncols, out->elements, &nrows, pivot, &info); +#endif + + if (info!=0) return (info>0 ? MATRIX_SING : MATRIX_INVLD); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgetri(LAPACK_COL_MAJOR, nrows, out->elements, nrows, pivot); +#else + int lwork=nrows*ncols; double work[nrows*ncols]; + dgetri_(&nrows, out->elements, &nrows, pivot, work, &lwork, &info); +#endif + + return (info==0 ? MATRIX_OK : (info>0 ? MATRIX_SING : MATRIX_INVLD)); +} + +/** Compute eigenvalues and eigenvectors of a matrix + * @param[in] a - an objectmatrix to diagonalize of size n + * @param[out] wr - a buffer of size n will hold the real part of the eigenvalues on exit + * @param[out] wi - a buffer of size n will hold the imag part of the eigenvalues on exit + * @param[out] vec - (optional) will be filled out with eigenvectors as columns (should be of size n) + * @returns an error code or MATRIX_OK on success */ +objectmatrixerror matrix_eigensystem(objectmatrix *a, double *wr, double *wi, objectmatrix *vec) { + int info, n=a->nrows; + if (a->nrows!=a->ncols) return MATRIX_NSQ; + if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return MATRIX_INCMPTBLDIM; + + // Copy a to prevent destruction + size_t size = ((size_t) n) * ((size_t) n) * sizeof(double); + double *acopy=MORPHO_MALLOC(size); + if (!acopy) return MATRIX_ALLOC; + cblas_dcopy(n*n, a->elements, 1, acopy, 1); + +#ifdef MORPHO_LINALG_USE_LAPACKE + info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, acopy, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); +#else + int lwork=4*n; double work[4*n]; + dgeev_("N", (vec ? "V" : "N"), &n, acopy, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); +#endif + + if (acopy) MORPHO_FREE(acopy); // Free up buffer + + if (info!=0) return (info>0 ? MATRIX_FAILED : MATRIX_INVLD); + + return MATRIX_OK; +} + + +/** Sums all elements of a matrix using Kahan summation */ +double matrix_sum(objectmatrix *a) { + unsigned int nel=a->ncols*a->nrows; + double sum=0.0, c=0.0, y,t; + + for (unsigned int i=0; ielements[i]-c; + t=sum+y; + c=(t-sum)-y; + sum=t; + } + return sum; +} + +/** Norms */ + +/** Computes the Frobenius norm of a matrix */ +double matrix_norm(objectmatrix *a) { + double nrm2=cblas_dnrm2(a->ncols*a->nrows, a->elements, 1); + return nrm2; +} + +/** Computes the L1 norm of a matrix */ +double matrix_L1norm(objectmatrix *a) { + unsigned int nel=a->ncols*a->nrows; + double sum=0.0, c=0.0, y,t; + + for (unsigned int i=0; ielements[i])-c; + t=sum+y; + c=(t-sum)-y; + sum=t; + } + return sum; +} + +/** Computes the Ln norm of a matrix */ +double matrix_Lnnorm(objectmatrix *a, double n) { + unsigned int nel=a->ncols*a->nrows; + double sum=0.0, c=0.0, y,t; + + for (unsigned int i=0; ielements[i],n)-c; + t=sum+y; + c=(t-sum)-y; + sum=t; + } + return pow(sum,1.0/n); +} + +/** Computes the Linf norm of a matrix */ +double matrix_Linfnorm(objectmatrix *a) { + unsigned int nel=a->ncols*a->nrows; + double max=0.0; + + for (unsigned int i=0; ielements[i]); + if (y>max) max=y; + } + return max; +} + +/** Transpose a matrix */ +objectmatrixerror matrix_transpose(objectmatrix *a, objectmatrix *out) { + if (!(a->ncols==out->nrows && a->nrows == out->ncols)) return MATRIX_INCMPTBLDIM; + + /* Copy elements a column at a time */ + for (unsigned int i=0; incols; i++) { + cblas_dcopy(a->nrows, a->elements+(i*a->nrows), 1, out->elements+i, a->ncols); + } + return MATRIX_OK; +} + +/** Calculate the trace of a matrix */ +objectmatrixerror matrix_trace(objectmatrix *a, double *out) { + if (a->nrows!=a->ncols) return MATRIX_NSQ; + *out=1.0; + *out=cblas_ddot(a->nrows, a->elements, a->ncols+1, out, 0); + + return MATRIX_OK; +} + +/** Scale a matrix */ +objectmatrixerror matrix_scale(objectmatrix *a, double scale) { + cblas_dscal(a->ncols*a->nrows, scale, a->elements, 1); + + return MATRIX_OK; +} + +/** Load the indentity matrix*/ +objectmatrixerror matrix_identity(objectmatrix *a) { + if (a->ncols!=a->nrows) return MATRIX_NSQ; + memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); + for (int i=0; inrows; i++) a->elements[i+a->nrows*i]=1.0; + return MATRIX_OK; +} + +/** Sets a matrix to zero */ +objectmatrixerror matrix_zero(objectmatrix *a) { + memset(a->elements, 0, sizeof(double)*a->nrows*a->ncols); + + return MATRIX_OK; +} + +/** Prints a matrix */ +void matrix_print(vm *v, objectmatrix *m) { + for (int i=0; inrows; i++) { // Rows run from 0...m + morpho_printf(v, "[ "); + for (int j=0; jncols; j++) { // Columns run from 0...k + double val; + matrix_getelement(m, i, j, &val); + morpho_printf(v, "%g ", (fabs(val)nrows-1 ? "\n" : "")); + } +} + +/** Prints a matrix to a buffer */ +bool matrix_printtobuffer(objectmatrix *m, char *format, varray_char *out) { + for (int i=0; inrows; i++) { // Rows run from 0...m + varray_charadd(out, "[ ", 2); + + for (int j=0; jncols; j++) { // Columns run from 0...k + double val; + matrix_getelement(m, i, j, &val); + if (!format_printtobuffer(MORPHO_FLOAT(val), format, out)) return false; + varray_charadd(out, " ", 1); + } + varray_charadd(out, "]", 1); + if (inrows-1) varray_charadd(out, "\n", 1); + } + return true; +} + +/** Matrix eigensystem */ +bool matrix_eigen(vm *v, objectmatrix *a, value *evals, value *evecs) { + double *ev = MORPHO_MALLOC(sizeof(double)*a->nrows*2); // Allocate temporary memory for eigenvalues + double *er=ev, *ei=ev+a->nrows; + + objectmatrix *vecs=NULL; // A new matrix for eigenvectors + objectlist *vallist = object_newlist(0, NULL); // List to hold eigenvalues + bool success=false; + + if (evecs) vecs=object_clonematrix(a); // Clones a to hold eigenvectors + + // Check that everything was allocated correctly + if (!(ev && vallist && (!evecs || vecs))) { + morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto matrix_eigen_cleanup; }; + + objectmatrixerror err=matrix_eigensystem(a, er, ei, vecs); + + if (err!=MATRIX_OK) { + matrix_raiseerror(v, err); + goto matrix_eigen_cleanup; + } + + // Now process the eigenvalues + for (int i=0; inrows; i++) { + if (fabs(ei[i])val.count; i++) { + if (MORPHO_ISOBJECT(vallist->val.data[i])) object_free(MORPHO_GETOBJECT(vallist->val.data[i])); + } + object_free((object *) vallist); + } + if (vecs) object_free((object *) vecs); + } + + return success; +} + +/* ********************************************************************** + * Matrix veneer class + * ********************************************************************* */ + +/** Constructs a Matrix object */ +value matrix_constructor(vm *v, int nargs, value *args) { + unsigned int nrows, ncols; + objectmatrix *new=NULL; + value out=MORPHO_NIL; + + if (nargs==2 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 1)) ) { + nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + new=object_newmatrix(nrows, ncols, true); + } else if (nargs==1 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { + nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + ncols = 1; + new=object_newmatrix(nrows, ncols, true); + } else if (nargs==1 && + MORPHO_ISARRAY(MORPHO_GETARG(args, 0))) { + new=object_matrixfromarray(MORPHO_GETARRAY(MORPHO_GETARG(args, 0))); + if (!new) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); +#ifdef MORPHO_INCLUDE_SPARSE + } else if (nargs==1 && + MORPHO_ISLIST(MORPHO_GETARG(args, 0))) { + new=object_matrixfromlist(MORPHO_GETLIST(MORPHO_GETARG(args, 0))); + if (!new) { + /** Could this be a concatenation operation? */ + objectsparseerror err = sparse_catmatrix(MORPHO_GETLIST(MORPHO_GETARG(args, 0)), &new); + if (err==SPARSE_INVLDINIT) { + morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); + } else if (err!=SPARSE_OK) sparse_raiseerror(v, err); + } +#endif + } else if (nargs==1 && + MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + new=object_clonematrix(MORPHO_GETMATRIX(MORPHO_GETARG(args, 0))); + if (!new) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); +#ifdef MORPHO_INCLUDE_SPARSE + } else if (nargs==1 && + MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { + objectsparseerror err=sparse_tomatrix(MORPHO_GETSPARSE(MORPHO_GETARG(args, 0)), &new); + if (err!=SPARSE_OK) morpho_runtimeerror(v, MATRIX_INVLDARRAYINIT); +#endif + } else morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); + + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + + return out; +} + +/** Creates an identity matrix */ +value matrix_identityconstructor(vm *v, int nargs, value *args) { + int n; + objectmatrix *new=NULL; + value out = MORPHO_NIL; + + if (nargs==1 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { + n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + new=object_newmatrix(n, n, false); + if (new) { + matrix_identity(new); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + } else morpho_runtimeerror(v, MATRIX_IDENTCONSTRUCTOR); + + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + + return out; +} + +/** Checks that a matrix is indexed with 2 indices with a generic interface */ +bool matrix_slicedim(value * a, unsigned int ndim){ + if (ndim>2||ndim<0) return false; + return true; +} + +/** Constucts a new matrix with a generic interface */ +void matrix_sliceconstructor(unsigned int *slicesize,unsigned int ndim,value* out){ + unsigned int numcol = 1; + if (ndim == 2) { + numcol = slicesize[1]; + } + *out = MORPHO_OBJECT(object_newmatrix(slicesize[0],numcol,false)); +} +/** Copies data from a at indx to out at newindx with a generic interface */ +objectarrayerror matrix_slicecopy(value * a,value * out, unsigned int ndim, unsigned int *indx,unsigned int *newindx){ + double num; // matrices store doubles; + unsigned int colindx = 0; + unsigned int colnewindx = 0; + + if (ndim == 2) { + colindx = indx[1]; + colnewindx = newindx[1]; + } + + if (!(matrix_getelement(MORPHO_GETMATRIX(*a),indx[0],colindx,&num)&& + matrix_setelement(MORPHO_GETMATRIX(*out),newindx[0],colnewindx,num))){ + return ARRAY_OUTOFBOUNDS; + } + return ARRAY_OK; +} + +/** Rolls the matrix list */ +void matrix_rollflat(objectmatrix *a, objectmatrix *b, int nplaces) { + unsigned int N = a->nrows*a->ncols; + int n = abs(nplaces); + if (n>N) n = n % N; + unsigned int Np = N - n; // Number of elements to roll + + if (nplaces<0) { + memcpy(b->matrixdata, a->matrixdata+n, sizeof(double)*Np); + memcpy(b->matrixdata+Np, a->matrixdata, sizeof(double)*n); + } else { + memcpy(b->matrixdata+n, a->matrixdata, sizeof(double)*Np); + if (n>0) memcpy(b->matrixdata, a->matrixdata+Np, sizeof(double)*n); + } +} + +/** Copies arow from matrix a into brow for matrix b */ +void matrix_copyrow(objectmatrix *a, int arow, objectmatrix *b, int brow) { + cblas_dcopy(a->ncols, a->elements+arow, a->nrows, b->elements+brow, a->nrows); +} + +/** Rolls a list by a number of elements */ +objectmatrix *matrix_roll(objectmatrix *a, int nplaces, int axis) { + objectmatrix *new=object_newmatrix(a->nrows, a->ncols, false); + + if (new) { + switch(axis) { + case 0: { // TODO: Could probably be faster + for (int i=0; inrows; i++) { + int j = (i+nplaces); + if (j<0) j+=a->nrows; + matrix_copyrow(a, i, new, j % a->nrows); + } + } + break; + case 1: matrix_rollflat(a, new, nplaces*a->nrows); break; + } + } + + return new; +} + +/** Gets the matrix element with given indices */ +value Matrix_getindex(vm *v, int nargs, value *args) { + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + unsigned int indx[2]={0,0}; + value out = MORPHO_NIL; + if (nargs>2){ + morpho_runtimeerror(v, MATRIX_INVLDNUMINDICES); + return out; + } + + if (array_valuelisttoindices(nargs, args+1, indx)) { + double outval; + if (!matrix_getelement(m, indx[0], indx[1], &outval)) { + morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } else { + out = MORPHO_FLOAT(outval); + } + } else { // now try to get a slice + objectarrayerror err = getslice(&MORPHO_SELF(args), &matrix_slicedim, &matrix_sliceconstructor, &matrix_slicecopy, nargs, &MORPHO_GETARG(args,0), &out); + if (err!=ARRAY_OK) MORPHO_RAISE(v, array_to_matrix_error(err) ); + if (MORPHO_ISOBJECT(out)){ + morpho_bindobjects(v,1,&out); + } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); + } + return out; +} + +/** Sets the matrix element with given indices */ +value Matrix_setindex(vm *v, int nargs, value *args) { + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + unsigned int indx[2]={0,0}; + + if (array_valuelisttoindices(nargs-1, args+1, indx)) { + double value=0.0; + if (MORPHO_ISFLOAT(args[nargs])) value=MORPHO_GETFLOATVALUE(args[nargs]); + if (MORPHO_ISINTEGER(args[nargs])) value=(double) MORPHO_GETINTEGERVALUE(args[nargs]); + + if (!matrix_setelement(m, indx[0], indx[1], value)) { + morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } + } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); + + return MORPHO_NIL; +} + +/** Sets the column of a matrix */ +value Matrix_setcolumn(vm *v, int nargs, value *args) { + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + + if (nargs==2 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && + MORPHO_ISMATRIX(MORPHO_GETARG(args, 1))) { + unsigned int col = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + objectmatrix *src = MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); + + if (colncols) { + if (src && src->ncols*src->nrows==m->nrows) { + matrix_setcolumn(m, col, src->elements); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); + + return MORPHO_NIL; +} + +/** Gets a column of a matrix */ +value Matrix_getcolumn(vm *v, int nargs, value *args) { + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { + unsigned int col = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + if (colncols) { + double *vals; + if (matrix_getcolumn(m, col, &vals)) { + objectmatrix *new=object_matrixfromfloats(m->nrows, 1, vals); + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + } + } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); + + return out; +} + +/** Prints a matrix */ +value Matrix_print(vm *v, int nargs, value *args) { + value self = MORPHO_SELF(args); + if (!MORPHO_ISMATRIX(self)) return Object_print(v, nargs, args); + + objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); + matrix_print(v, m); + return MORPHO_NIL; +} + +/** Formatted conversion to a string */ +value Matrix_format(vm *v, int nargs, value *args) { + value out = MORPHO_NIL; + + if (nargs==1 && + MORPHO_ISSTRING(MORPHO_GETARG(args, 0))) { + varray_char str; + varray_charinit(&str); + + if (matrix_printtobuffer(MORPHO_GETMATRIX(MORPHO_SELF(args)), + MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), + &str)) { + out = object_stringfromvarraychar(&str); + if (MORPHO_ISOBJECT(out)) morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + + varray_charclear(&str); + } else { + morpho_runtimeerror(v, VALUE_FRMTARG); + } + + return out; +} + +/** Matrix add */ +value Matrix_assign(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + if (a->ncols==b->ncols && a->nrows==b->nrows) { + matrix_copy(b, a); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } + + return MORPHO_NIL; +} + +/** Matrix add */ +value Matrix_add(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + if (a->ncols==b->ncols && a->nrows==b->nrows) { + objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); + if (new) { + out=MORPHO_OBJECT(new); + matrix_add(a, b, new); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { + double val; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &val)) { + objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); + if (new) { + out=MORPHO_OBJECT(new); + matrix_addscalar(a, 1.0, val, new); + } + } + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + if (!MORPHO_ISNIL(out)) morpho_bindobjects(v, 1, &out); + + return out; +} + +/** Right add */ +value Matrix_addr(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && (MORPHO_ISNIL(MORPHO_GETARG(args, 0)) || + MORPHO_ISNUMBER(MORPHO_GETARG(args, 0)))) { + int i=0; + if (MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) i=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + if (MORPHO_ISFLOAT(MORPHO_GETARG(args, 0))) i=(fabs(MORPHO_GETFLOATVALUE(MORPHO_GETARG(args, 0)))ncols==b->ncols && a->nrows==b->nrows) { + objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); + if (new) { + out=MORPHO_OBJECT(new); + matrix_sub(a, b, new); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { + double val; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &val)) { + objectmatrix *new = object_newmatrix(a->nrows, a->ncols, false); + if (new) { + out=MORPHO_OBJECT(new); + matrix_addscalar(a, 1.0, -val, new); + } + } + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + if (!MORPHO_ISNIL(out)) morpho_bindobjects(v, 1, &out); + + return out; +} + +/** Right subtract */ +value Matrix_subr(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && (MORPHO_ISNIL(MORPHO_GETARG(args, 0)) || + MORPHO_ISNUMBER(MORPHO_GETARG(args, 0)))) { + int i=(MORPHO_ISNIL(MORPHO_GETARG(args, 0)) ? 0 : MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0))); + + if (MORPHO_ISFLOAT(MORPHO_GETARG(args, 0))) i=(fabs(MORPHO_GETFLOATVALUE(MORPHO_GETARG(args, 0)))nrows, a->ncols, false); + if (new) { + matrix_addscalar(a, 1.0, -val, new); + // now that did self - arg[0] and we want arg[0] - self so scale the whole thing by -1 + matrix_scale(new, -1.0); + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + } + + } else morpho_runtimeerror(v, VM_INVALIDARGS); + } else morpho_runtimeerror(v, VM_INVALIDARGS); + + return out; +} + +/** Matrix multiply */ +value Matrix_mul(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + if (a->ncols==b->nrows) { + objectmatrix *new = object_newmatrix(a->nrows, b->ncols, false); + if (new) { + out=MORPHO_OBJECT(new); + matrix_mul(a, b, new); + morpho_bindobjects(v, 1, &out); + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { + double scale=1.0; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { + objectmatrix *new = object_clonematrix(a); + if (new) { + out=MORPHO_OBJECT(new); + matrix_scale(new, scale); + morpho_bindobjects(v, 1, &out); + } + } +#ifdef MORPHO_INCLUDE_SPARSE + } else if (nargs==1 && MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { + // Returns nil to ensure it gets passed to mulr on Sparse +#endif + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + return out; +} + +/** Called when multiplying on the right */ +value Matrix_mulr(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { + double scale=1.0; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { + objectmatrix *new = object_clonematrix(a); + if (new) { + out=MORPHO_OBJECT(new); + matrix_scale(new, scale); + morpho_bindobjects(v, 1, &out); + } + } + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + return out; +} + +/** Solution of linear system a.x = b (i.e. x = b/a) */ +value Matrix_div(vm *v, int nargs, value *args) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + if (a->ncols==b->nrows) { + objectmatrix *new = object_newmatrix(b->nrows, b->ncols, false); + if (new) { + objectmatrixerror err; + if (MATRIX_ISSMALL(a)) { + err=matrix_divs(a, b, new); + } else { + err=matrix_divl(a, b, new); + } + if (err==MATRIX_SING) { + morpho_runtimeerror(v, MATRIX_SINGULAR); + object_free((object *) new); + } else { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + } + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); +#ifdef MORPHO_INCLUDE_SPARSE + } else if (nargs==1 && MORPHO_ISSPARSE(MORPHO_GETARG(args, 0))) { + /* Division by a sparse matrix: redirect to the divr selector of Sparse. */ + value vargs[2]={args[1],args[0]}; + return Sparse_divr(v, nargs, vargs); +#endif + } else if (nargs==1 && MORPHO_ISNUMBER(MORPHO_GETARG(args, 0))) { + /* Division by a scalar */ + double scale=1.0; + if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) { + if (fabs(scale)ncols==b->ncols && a->nrows==b->nrows) { + out=MORPHO_SELF(args); + double lambda=1.0; + morpho_valuetofloat(MORPHO_GETARG(args, 0), &lambda); + matrix_accumulate(a, lambda, b); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + return MORPHO_NIL; +} + +/** Frobenius inner product */ +value Matrix_inner(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + + double prod=0.0; + if (matrix_inner(a, b, &prod)==MATRIX_OK) { + out = MORPHO_FLOAT(prod); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + return out; +} + +/** Outer product */ +value Matrix_outer(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { + objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); + objectmatrix *new=object_newmatrix(a->nrows*a->ncols, b->nrows*b->ncols, true); + + if (new && + matrix_outer(a, b, new)==MATRIX_OK) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + + return out; +} + +/** Matrix sum */ +value Matrix_sum(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + return MORPHO_FLOAT(matrix_sum(a)); +} + +/** Roll a matrix */ +value Matrix_roll(vm *v, int nargs, value *args) { + objectmatrix *slf = MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out = MORPHO_NIL; + int roll, axis=0; + + if (nargs>0 && + morpho_valuetoint(MORPHO_GETARG(args, 0), &roll)) { + + if (nargs==2 && !morpho_valuetoint(MORPHO_GETARG(args, 1), &axis)) return out; + + objectmatrix *new = matrix_roll(slf, roll, axis); + + if (new) { + out = MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + + } else morpho_runtimeerror(v, LIST_ADDARGS); + + return out; +} + + +/** Matrix norm */ +value Matrix_norm(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out = MORPHO_NIL; + + if (nargs==1) { + value arg = MORPHO_GETARG(args, 0); + + if (MORPHO_ISNUMBER(arg)) { + double n; + + if (morpho_valuetofloat(arg, &n)) { + if (fabs(n-1.0)val.count, new->val.data); + new->val.count--; // And pop it back off + } + + return evals; +} + +/** Matrix eigensystem */ +value Matrix_eigensystem(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value evals=MORPHO_NIL, evecs=MORPHO_NIL, out=MORPHO_NIL; + objectlist *resultlist = object_newlist(0, NULL); + if (!resultlist) { + morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + return MORPHO_NIL; + } + + if (matrix_eigen(v, a, &evals, &evecs)) { + objectlist *evallist = MORPHO_GETLIST(evals); + + list_append(resultlist, evals); // Create the output list + list_append(resultlist, evecs); + out=MORPHO_OBJECT(resultlist); + + list_append(evallist, evals); // Ensure we bind all objects at once + list_append(evallist, evecs); // by popping them onto the evallist. + list_append(evallist, out); // + morpho_bindobjects(v, evallist->val.count, evallist->val.data); + evallist->val.count-=3; // and then popping them back off. + } + + return out; +} + +/** Inverts a matrix */ +value Matrix_inverse(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + // The inverse will have the number of rows and number of columns + // swapped. + objectmatrix *new = object_newmatrix(a->ncols, a->nrows, false); + if (new) { + objectmatrixerror mi = matrix_inverse(a, new); + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + + if (mi!=MATRIX_OK) matrix_raiseerror(v, mi); + } + + return out; +} + +/** Transpose of a matrix */ +value Matrix_transpose(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + objectmatrix *new = object_newmatrix(a->ncols, a->nrows, false); + if (new) { + matrix_transpose(a, new); + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } + + return out; +} + +/** Reshape a matrix */ +value Matrix_reshape(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + + if (nargs==2 && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 0)) && + MORPHO_ISINTEGER(MORPHO_GETARG(args, 1))) { + int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + int ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); + + if (nrows*ncols==a->nrows*a->ncols) { + a->nrows=nrows; + a->ncols=ncols; + } else morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + } else morpho_runtimeerror(v, MATRIX_RESHAPEARGS); + + return MORPHO_NIL; +} + +/** Trace of a matrix */ +value Matrix_trace(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (a->nrows==a->ncols) { + double tr; + if (matrix_trace(a, &tr)==MATRIX_OK) out=MORPHO_FLOAT(tr); + } else { + morpho_runtimeerror(v, MATRIX_NOTSQ); + } + + return out; +} + +/** Enumerate protocol */ +value Matrix_enumerate(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value out=MORPHO_NIL; + + if (nargs==1) { + if (MORPHO_ISINTEGER(MORPHO_GETARG(args, 0))) { + int i=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + + if (i<0) out=MORPHO_INTEGER(a->ncols*a->nrows); + else if (incols*a->nrows) out=MORPHO_FLOAT(a->elements[i]); + } + } + + return out; +} + + +/** Number of matrix elements */ +value Matrix_count(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + + return MORPHO_INTEGER(a->ncols*a->nrows); +} + +/** Matrix dimensions */ +value Matrix_dimensions(vm *v, int nargs, value *args) { + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + value dim[2]; + value out=MORPHO_NIL; + + dim[0]=MORPHO_INTEGER(a->nrows); + dim[1]=MORPHO_INTEGER(a->ncols); + + objectlist *new=object_newlist(2, dim); + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + + return out; +} + +/** Clones a matrix */ +value Matrix_clone(vm *v, int nargs, value *args) { + value out=MORPHO_NIL; + objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); + objectmatrix *new=object_clonematrix(a); + if (new) { + out=MORPHO_OBJECT(new); + morpho_bindobjects(v, 1, &out); + } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + return out; +} + +MORPHO_BEGINCLASS(Matrix) +MORPHO_METHOD(MORPHO_GETINDEX_METHOD, Matrix_getindex, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_SETINDEX_METHOD, Matrix_setindex, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_GETCOLUMN_METHOD, Matrix_getcolumn, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_SETCOLUMN_METHOD, Matrix_setcolumn, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_PRINT_METHOD, Matrix_print, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_FORMAT_METHOD, Matrix_format, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_ASSIGN_METHOD, Matrix_assign, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_addr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_MUL_METHOD, Matrix_mul, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_MULR_METHOD, Matrix_mulr, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_DIV_METHOD, Matrix_div, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_ACC_METHOD, Matrix_acc, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_INNER_METHOD, Matrix_inner, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_OUTER_METHOD, Matrix_outer, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_SUM_METHOD, Matrix_sum, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_NORM_METHOD, Matrix_norm, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_INVERSE_METHOD, Matrix_inverse, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_TRANSPOSE_METHOD, Matrix_transpose, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_RESHAPE_METHOD, Matrix_reshape, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_EIGENVALUES_METHOD, Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_EIGENSYSTEM_METHOD, Matrix_eigensystem, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_TRACE_METHOD, Matrix_trace, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_ENUMERATE_METHOD, Matrix_enumerate, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_COUNT_METHOD, Matrix_count, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MATRIX_DIMENSIONS_METHOD, Matrix_dimensions, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_ROLL_METHOD, Matrix_roll, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD(MORPHO_CLONE_METHOD, Matrix_clone, BUILTIN_FLAGSEMPTY) +MORPHO_ENDCLASS + +/* ********************************************************************** + * Initialization + * ********************************************************************* */ + +void matrix_initialize(void) { + objectmatrixtype=object_addtype(&objectmatrixdefn); + + builtin_addfunction(MATRIX_CLASSNAME, matrix_constructor, MORPHO_FN_CONSTRUCTOR); + builtin_addfunction(MATRIX_IDENTITYCONSTRUCTOR, matrix_identityconstructor, BUILTIN_FLAGSEMPTY); + + objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); + value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); + + value matrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(Matrix), objclass); + object_setveneerclass(OBJECT_MATRIX, matrixclass); + + morpho_defineerror(MATRIX_INDICESOUTSIDEBOUNDS, ERROR_HALT, MATRIX_INDICESOUTSIDEBOUNDS_MSG); + morpho_defineerror(MATRIX_INVLDINDICES, ERROR_HALT, MATRIX_INVLDINDICES_MSG); + morpho_defineerror(MATRIX_INVLDNUMINDICES, ERROR_HALT, MATRIX_INVLDNUMINDICES_MSG); + morpho_defineerror(MATRIX_CONSTRUCTOR, ERROR_HALT, MATRIX_CONSTRUCTOR_MSG); + morpho_defineerror(MATRIX_INVLDARRAYINIT, ERROR_HALT, MATRIX_INVLDARRAYINIT_MSG); + morpho_defineerror(MATRIX_ARITHARGS, ERROR_HALT, MATRIX_ARITHARGS_MSG); + morpho_defineerror(MATRIX_RESHAPEARGS, ERROR_HALT, MATRIX_RESHAPEARGS_MSG); + morpho_defineerror(MATRIX_INCOMPATIBLEMATRICES, ERROR_HALT, MATRIX_INCOMPATIBLEMATRICES_MSG); + morpho_defineerror(MATRIX_SINGULAR, ERROR_HALT, MATRIX_SINGULAR_MSG); + morpho_defineerror(MATRIX_NOTSQ, ERROR_HALT, MATRIX_NOTSQ_MSG); + morpho_defineerror(MATRIX_OPFAILED, ERROR_HALT, MATRIX_OPFAILED_MSG); + morpho_defineerror(MATRIX_SETCOLARGS, ERROR_HALT, MATRIX_SETCOLARGS_MSG); + morpho_defineerror(MATRIX_NORMARGS, ERROR_HALT, MATRIX_NORMARGS_MSG); + morpho_defineerror(MATRIX_IDENTCONSTRUCTOR, ERROR_HALT, MATRIX_IDENTCONSTRUCTOR_MSG); +} + +#endif diff --git a/src/linalg/xmatrix.h b/src/linalg/xmatrix.h new file mode 100644 index 00000000..fe74a515 --- /dev/null +++ b/src/linalg/xmatrix.h @@ -0,0 +1,205 @@ +/** @file matrix.h + * @author T J Atherton + * + * @brief Veneer class over the objectmatrix type that interfaces with blas and lapack + */ + +#ifndef matrix_h +#define matrix_h + +#include "build.h" +#ifdef MORPHO_INCLUDE_LINALG + +#include +#include "classes.h" +/** Use Apple's Accelerate library for LAPACK and BLAS */ +#ifdef __APPLE__ +#ifdef MORPHO_LINALG_USE_ACCELERATE +#define ACCELERATE_NEW_LAPACK +#include +#define MATRIX_LAPACK_PRESENT +#endif +#endif + +/** Otherwise, use LAPACKE */ +#ifndef MATRIX_LAPACK_PRESENT +#include +#include +#define MORPHO_LINALG_USE_LAPACKE +#define MATRIX_LAPACK_PRESENT +#endif + +#include "cmplx.h" +#include "list.h" + +/* ------------------------------------------------------- + * Matrix objects + * ------------------------------------------------------- */ + +extern objecttype objectmatrixtype; +#define OBJECT_MATRIX objectmatrixtype + +/** Matrices are a purely numerical collection type oriented toward linear algebra. + Elements are stored in column-major format, i.e. + [ 1 2 ] + [ 3 4 ] + is stored ( 1, 3, 2, 4 ) in memory. This is for compatibility with standard linear algebra packages */ + +typedef struct { + object obj; + unsigned int nrows; + unsigned int ncols; + double *elements; + double matrixdata[]; +} objectmatrix; + +/** Tests whether an object is a matrix */ +#define MORPHO_ISMATRIX(val) object_istype(val, OBJECT_MATRIX) + +/** Gets the object as an matrix */ +#define MORPHO_GETMATRIX(val) ((objectmatrix *) MORPHO_GETOBJECT(val)) + +/** Creates a matrix object */ +objectmatrix *object_newmatrix(unsigned int nrows, unsigned int ncols, bool zero); + +/** Creates a new matrix from an array */ +objectmatrix *object_matrixfromarray(objectarray *array); + +/** Creates a new matrix from an existing matrix */ +objectmatrix *object_clonematrix(objectmatrix *array); + +/** @brief Use to create static matrices on the C stack + @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ +#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc } + +/** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ +#define MATRIX_ISSMALL(m) (m->nrows*m->ncols Date: Wed, 14 Jan 2026 21:36:44 -0500 Subject: [PATCH 099/156] Correct more tests --- .../arithmetic/complexmatrix_add_matrix.morpho | 2 +- .../arithmetic/complexmatrix_addr_matrix.morpho | 2 +- .../arithmetic/complexmatrix_div_matrix.morpho | 4 ++-- .../arithmetic/complexmatrix_divr_matrix.morpho | 4 ++-- .../arithmetic/complexmatrix_mul_matrix.morpho | 2 +- .../arithmetic/complexmatrix_mulr_matrix.morpho | 2 +- .../arithmetic/complexmatrix_sub_matrix.morpho | 2 +- .../arithmetic/complexmatrix_subr_matrix.morpho | 2 +- newlinalg/test/arithmetic/matrix_acc.morpho | 2 +- newlinalg/test/arithmetic/matrix_add_matrix.morpho | 4 ++-- newlinalg/test/arithmetic/matrix_add_nil.morpho | 2 +- newlinalg/test/arithmetic/matrix_add_scalar.morpho | 2 +- newlinalg/test/arithmetic/matrix_addr_nil.morpho | 2 +- .../test/arithmetic/matrix_addr_scalar.morpho | 2 +- newlinalg/test/arithmetic/matrix_div_matrix.morpho | 6 +++--- newlinalg/test/arithmetic/matrix_div_scalar.morpho | 4 ++-- newlinalg/test/arithmetic/matrix_mul_matrix.morpho | 10 +++++----- newlinalg/test/arithmetic/matrix_mul_scalar.morpho | 4 ++-- newlinalg/test/arithmetic/matrix_negate.morpho | 2 +- newlinalg/test/arithmetic/matrix_sub_matrix.morpho | 4 ++-- newlinalg/test/arithmetic/matrix_sub_scalar.morpho | 2 +- .../test/arithmetic/matrix_subr_scalar.morpho | 2 +- newlinalg/test/assign/matrix_assign.morpho | 4 ++-- .../complexmatrix_matrix_constructor.morpho | 2 +- .../constructors/matrix_array_constructor.morpho | 2 +- ...rix_array_constructor_invalid_dimensions.morpho | 4 ++-- .../test/constructors/matrix_constructor.morpho | 2 +- .../matrix_constructor_edge_cases.morpho | 14 +++++++------- .../matrix_identity_constructor.morpho | 6 +++--- .../constructors/matrix_list_constructor.morpho | 2 +- .../matrix_list_vector_constructor.morpho | 2 +- .../constructors/matrix_tuple_constructor.morpho | 4 ++-- .../constructors/matrix_vector_constructor.morpho | 2 +- newlinalg/test/index/matrix_getcolumn.morpho | 2 +- newlinalg/test/index/matrix_getindex.morpho | 2 +- newlinalg/test/index/matrix_setcolumn.morpho | 6 +++--- newlinalg/test/index/matrix_setindex.morpho | 2 +- newlinalg/test/index/matrix_setslice.morpho | 12 ++++++------ newlinalg/test/index/matrix_slice.morpho | 2 +- newlinalg/test/index/matrix_slice_bounds.morpho | 2 +- .../test/index/matrix_slice_infinite_range.morpho | 2 +- newlinalg/test/methods/matrix_count.morpho | 4 ++-- newlinalg/test/methods/matrix_dimensions.morpho | 6 +++--- newlinalg/test/methods/matrix_eigensystem.morpho | 4 ++-- newlinalg/test/methods/matrix_eigenvalues.morpho | 2 +- newlinalg/test/methods/matrix_enumerate.morpho | 2 +- newlinalg/test/methods/matrix_format.morpho | 2 +- newlinalg/test/methods/matrix_inner.morpho | 4 ++-- newlinalg/test/methods/matrix_inverse.morpho | 2 +- .../test/methods/matrix_inverse_singular.morpho | 2 +- newlinalg/test/methods/matrix_norm.morpho | 4 ++-- newlinalg/test/methods/matrix_outer.morpho | 4 ++-- newlinalg/test/methods/matrix_qr.morpho | 14 +++++++------- newlinalg/test/methods/matrix_reshape.morpho | 4 ++-- newlinalg/test/methods/matrix_roll.morpho | 2 +- newlinalg/test/methods/matrix_sum.morpho | 2 +- newlinalg/test/methods/matrix_svd.morpho | 12 ++++++------ newlinalg/test/methods/matrix_trace.morpho | 2 +- newlinalg/test/methods/matrix_transpose.morpho | 2 +- src/linalg/{newlinalg.c => linalg.c} | 6 +++--- src/linalg/{newlinalg.h => linalg.h} | 8 ++++---- 61 files changed, 115 insertions(+), 115 deletions(-) rename src/linalg/{newlinalg.c => linalg.c} (96%) rename src/linalg/{newlinalg.h => linalg.h} (97%) diff --git a/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho index e019a40c..b124d8b2 100644 --- a/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = XMatrix(((1, 2), (3, 4))) +var B = Matrix(((1, 2), (3, 4))) print A + B // expect: [ 2 + 1im 4 + 2im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho index 6d0edfc3..15a97a62 100644 --- a/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = XMatrix(((1, 2), (3, 4))) +var B = Matrix(((1, 2), (3, 4))) print B + A // expect: [ 2 + 1im 4 + 2im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho index 1d3214a7..eed76af3 100644 --- a/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho @@ -1,7 +1,7 @@ -// Divide ComplexMatrix by XMatrix (solve linear system) +// Divide ComplexMatrix by Matrix (solve linear system) import newlinalg -var A = XMatrix(((1,2),(-2,1))) +var A = Matrix(((1,2),(-2,1))) var b = ComplexMatrix((1+im, 2)) diff --git a/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho index 7c9afe06..9e0e1e41 100644 --- a/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho @@ -1,9 +1,9 @@ -// Divide XMatrix by ComplexMatrix (solve linear system) +// Divide Matrix by ComplexMatrix (solve linear system) import newlinalg var A = ComplexMatrix(((1,2+im),(2-im,1))) -var b = XMatrix((1, 2)) +var b = Matrix((1, 2)) print b / A // expect: [ 0.75 + 0.5im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho index 18e7419c..43834769 100644 --- a/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) -var B = XMatrix(((4,3),(2,1))) +var B = Matrix(((4,3),(2,1))) print A * B // expect: [ 8 + 8im 5 + 5im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho index 7cba06d6..f9551c2f 100644 --- a/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) -var B = XMatrix(((4,3),(2,1))) +var B = Matrix(((4,3),(2,1))) print B * A // expect: [ 13 + 13im 20 + 20im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho index 1b0afe9e..5e14f01c 100644 --- a/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = XMatrix(((4, 3), (2, 1))) +var B = Matrix(((4, 3), (2, 1))) print A - B // expect: [ -3 + 1im -1 + 2im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho index 03e9bbf0..ff6d357b 100644 --- a/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho +++ b/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho @@ -2,7 +2,7 @@ import newlinalg var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = XMatrix(((4, 3), (2, 1))) +var B = Matrix(((4, 3), (2, 1))) print B - A // expect: [ 3 - 1im 1 - 2im ] diff --git a/newlinalg/test/arithmetic/matrix_acc.morpho b/newlinalg/test/arithmetic/matrix_acc.morpho index e6430ebd..2a6a22ba 100644 --- a/newlinalg/test/arithmetic/matrix_acc.morpho +++ b/newlinalg/test/arithmetic/matrix_acc.morpho @@ -1,7 +1,7 @@ // In-place accumulate import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=1 A[1,0]=1 diff --git a/newlinalg/test/arithmetic/matrix_add_matrix.morpho b/newlinalg/test/arithmetic/matrix_add_matrix.morpho index 076f6451..7c71df78 100644 --- a/newlinalg/test/arithmetic/matrix_add_matrix.morpho +++ b/newlinalg/test/arithmetic/matrix_add_matrix.morpho @@ -2,8 +2,8 @@ import newlinalg -var a = XMatrix([[1, 2], [3, 4]]) -var b = XMatrix([[0, 1], [1, 0]]) +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) print "A+B:" print a+b diff --git a/newlinalg/test/arithmetic/matrix_add_nil.morpho b/newlinalg/test/arithmetic/matrix_add_nil.morpho index 23f4f313..2f3b764e 100644 --- a/newlinalg/test/arithmetic/matrix_add_nil.morpho +++ b/newlinalg/test/arithmetic/matrix_add_nil.morpho @@ -1,7 +1,7 @@ // Add a scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) print A + nil // expect: [ 0 0 ] diff --git a/newlinalg/test/arithmetic/matrix_add_scalar.morpho b/newlinalg/test/arithmetic/matrix_add_scalar.morpho index 8d456908..a7c81110 100644 --- a/newlinalg/test/arithmetic/matrix_add_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_add_scalar.morpho @@ -1,7 +1,7 @@ // Add a scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) print A + 2 // expect: [ 2 2 ] diff --git a/newlinalg/test/arithmetic/matrix_addr_nil.morpho b/newlinalg/test/arithmetic/matrix_addr_nil.morpho index 2cd52c76..c3334e60 100644 --- a/newlinalg/test/arithmetic/matrix_addr_nil.morpho +++ b/newlinalg/test/arithmetic/matrix_addr_nil.morpho @@ -1,7 +1,7 @@ // Add nil from the right import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A += 1 print nil + A diff --git a/newlinalg/test/arithmetic/matrix_addr_scalar.morpho b/newlinalg/test/arithmetic/matrix_addr_scalar.morpho index e50b3336..93e72152 100644 --- a/newlinalg/test/arithmetic/matrix_addr_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_addr_scalar.morpho @@ -1,7 +1,7 @@ // Add a scalar from the right import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) print 2 + A // expect: [ 2 2 ] diff --git a/newlinalg/test/arithmetic/matrix_div_matrix.morpho b/newlinalg/test/arithmetic/matrix_div_matrix.morpho index eb37485b..866d9530 100644 --- a/newlinalg/test/arithmetic/matrix_div_matrix.morpho +++ b/newlinalg/test/arithmetic/matrix_div_matrix.morpho @@ -1,13 +1,13 @@ -// Divide XMatrix by XMatrix (solve linear system) +// Divide Matrix by Matrix (solve linear system) import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 A[1,1]=4 -var b = XMatrix(2,1) +var b = Matrix(2,1) b[0]=1 b[1]=2 diff --git a/newlinalg/test/arithmetic/matrix_div_scalar.morpho b/newlinalg/test/arithmetic/matrix_div_scalar.morpho index 79a829cc..4fb79d92 100644 --- a/newlinalg/test/arithmetic/matrix_div_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_div_scalar.morpho @@ -1,7 +1,7 @@ -// Divide XMatrix by scalar +// Divide Matrix by scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=2 A[1,1]=4 diff --git a/newlinalg/test/arithmetic/matrix_mul_matrix.morpho b/newlinalg/test/arithmetic/matrix_mul_matrix.morpho index ca0811e1..79840303 100644 --- a/newlinalg/test/arithmetic/matrix_mul_matrix.morpho +++ b/newlinalg/test/arithmetic/matrix_mul_matrix.morpho @@ -1,13 +1,13 @@ -// Multiply two XMatrices +// Multiply two Matrices import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 A[1,1]=4 -var B = XMatrix(2,2) +var B = Matrix(2,2) B[0,0]=1 B[0,1]=0 B[1,0]=0 @@ -17,8 +17,8 @@ print A * B // expect: [ 1 2 ] // expect: [ 3 4 ] -var a = XMatrix([[1, 2], [3, 4]]) -var b = XMatrix([[0, 1], [1, 0]]) +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) print "A*B:" print a*b diff --git a/newlinalg/test/arithmetic/matrix_mul_scalar.morpho b/newlinalg/test/arithmetic/matrix_mul_scalar.morpho index 190e4def..f88ff97b 100644 --- a/newlinalg/test/arithmetic/matrix_mul_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_mul_scalar.morpho @@ -1,7 +1,7 @@ -// Multiply XMatrix by scalar +// Multiply Matrix by scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[1,1]=2 diff --git a/newlinalg/test/arithmetic/matrix_negate.morpho b/newlinalg/test/arithmetic/matrix_negate.morpho index c5f01d06..0613e11d 100644 --- a/newlinalg/test/arithmetic/matrix_negate.morpho +++ b/newlinalg/test/arithmetic/matrix_negate.morpho @@ -2,7 +2,7 @@ import newlinalg -var a = XMatrix([[1,2], [3,4]]) +var a = Matrix([[1,2], [3,4]]) print -a // expect: [ -1 -2 ] diff --git a/newlinalg/test/arithmetic/matrix_sub_matrix.morpho b/newlinalg/test/arithmetic/matrix_sub_matrix.morpho index 800d1440..dd36ad58 100644 --- a/newlinalg/test/arithmetic/matrix_sub_matrix.morpho +++ b/newlinalg/test/arithmetic/matrix_sub_matrix.morpho @@ -2,8 +2,8 @@ import newlinalg -var a = XMatrix([[1, 2], [3, 4]]) -var b = XMatrix([[0, 1], [1, 0]]) +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) print "A-B:" diff --git a/newlinalg/test/arithmetic/matrix_sub_scalar.morpho b/newlinalg/test/arithmetic/matrix_sub_scalar.morpho index 511a29b9..9f0e26c5 100644 --- a/newlinalg/test/arithmetic/matrix_sub_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_sub_scalar.morpho @@ -1,7 +1,7 @@ // Subtract a scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) print A - 2 // expect: [ -2 -2 ] diff --git a/newlinalg/test/arithmetic/matrix_subr_scalar.morpho b/newlinalg/test/arithmetic/matrix_subr_scalar.morpho index 02ac3acd..aab246de 100644 --- a/newlinalg/test/arithmetic/matrix_subr_scalar.morpho +++ b/newlinalg/test/arithmetic/matrix_subr_scalar.morpho @@ -1,7 +1,7 @@ // Subtract a scalar import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[1,1]=1 diff --git a/newlinalg/test/assign/matrix_assign.morpho b/newlinalg/test/assign/matrix_assign.morpho index 70e19dad..1d341bc6 100644 --- a/newlinalg/test/assign/matrix_assign.morpho +++ b/newlinalg/test/assign/matrix_assign.morpho @@ -2,13 +2,13 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0] = 1 A[0,1] = 2 A[1,0] = 3 A[1,1] = 4 -var B = XMatrix(2,2) +var B = Matrix(2,2) B.assign(A) print B diff --git a/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho b/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho index fdd36cd9..9c94d9a6 100644 --- a/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho +++ b/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(((1,2), (3,4))) +var A = Matrix(((1,2), (3,4))) var B = ComplexMatrix(A) diff --git a/newlinalg/test/constructors/matrix_array_constructor.morpho b/newlinalg/test/constructors/matrix_array_constructor.morpho index 7bc168e4..0658a8f0 100644 --- a/newlinalg/test/constructors/matrix_array_constructor.morpho +++ b/newlinalg/test/constructors/matrix_array_constructor.morpho @@ -8,7 +8,7 @@ a[1,0]=3 a[0,1]=2 a[1,1]=4 -var A = XMatrix(a) +var A = Matrix(a) print A // expect: [ 1 2 ] diff --git a/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho b/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho index a2d5160f..3c98c0b1 100644 --- a/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho +++ b/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho @@ -1,4 +1,4 @@ -// XMatrix constructor from Array with invalid dimensions +// Matrix constructor from Array with invalid dimensions import newlinalg // Try to construct from a 1D array (should fail - requires 2D) @@ -8,5 +8,5 @@ a[1] = 2 a[2] = 3 a[3] = 4 -print XMatrix(a) +print Matrix(a) // expect error 'LnAlgMtrxInvldArg' diff --git a/newlinalg/test/constructors/matrix_constructor.morpho b/newlinalg/test/constructors/matrix_constructor.morpho index d85f095d..c4b72114 100644 --- a/newlinalg/test/constructors/matrix_constructor.morpho +++ b/newlinalg/test/constructors/matrix_constructor.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) print A // expect: [ 0 0 ] diff --git a/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho b/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho index 509ec623..6d5954c6 100644 --- a/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho +++ b/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho @@ -1,35 +1,35 @@ -// XMatrix constructor edge cases +// Matrix constructor edge cases import newlinalg // Zero dimension matrix (0x0) -var A = XMatrix(0, 0) +var A = Matrix(0, 0) print A.dimensions() // expect: (0, 0) print A.count() // expect: 0 // Zero rows, non-zero columns -var B = XMatrix(0, 3) +var B = Matrix(0, 3) print B.dimensions() // expect: (0, 3) print B.count() // expect: 0 // Non-zero rows, zero columns -var C = XMatrix(3, 0) +var C = Matrix(3, 0) print C.dimensions() // expect: (3, 0) print C.count() // expect: 0 // Single element matrix (1x1) -var D = XMatrix(1, 1) +var D = Matrix(1, 1) D[0,0] = 42 print D // expect: [ 42 ] // Single row matrix (1xN) -var E = XMatrix(1, 3) +var E = Matrix(1, 3) E[0,0] = 1 E[0,1] = 2 E[0,2] = 3 @@ -37,7 +37,7 @@ print E // expect: [ 1 2 3 ] // Single column matrix (Nx1) -var F = XMatrix(3, 1) +var F = Matrix(3, 1) F[0,0] = 1 F[1,0] = 2 F[2,0] = 3 diff --git a/newlinalg/test/constructors/matrix_identity_constructor.morpho b/newlinalg/test/constructors/matrix_identity_constructor.morpho index 761948bb..2d850ac4 100644 --- a/newlinalg/test/constructors/matrix_identity_constructor.morpho +++ b/newlinalg/test/constructors/matrix_identity_constructor.morpho @@ -1,13 +1,13 @@ -// IdentityXMatrix constructor +// IdentityMatrix constructor import newlinalg -var I = IdentityXMatrix(3) +var I = IdentityMatrix(3) print I // expect: [ 1 0 0 ] // expect: [ 0 1 0 ] // expect: [ 0 0 1 ] -var I2 = IdentityXMatrix(1) +var I2 = IdentityMatrix(1) print I2 // expect: [ 1 ] diff --git a/newlinalg/test/constructors/matrix_list_constructor.morpho b/newlinalg/test/constructors/matrix_list_constructor.morpho index 22ab6b69..15e23882 100644 --- a/newlinalg/test/constructors/matrix_list_constructor.morpho +++ b/newlinalg/test/constructors/matrix_list_constructor.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix([[1,2],[3,4]]) +var A = Matrix([[1,2],[3,4]]) print A // expect: [ 1 2 ] diff --git a/newlinalg/test/constructors/matrix_list_vector_constructor.morpho b/newlinalg/test/constructors/matrix_list_vector_constructor.morpho index 4e34f4ac..8790fd03 100644 --- a/newlinalg/test/constructors/matrix_list_vector_constructor.morpho +++ b/newlinalg/test/constructors/matrix_list_vector_constructor.morpho @@ -2,7 +2,7 @@ import newlinalg -var C = XMatrix(((1),(2))) +var C = Matrix(((1),(2))) print C // expect: [ 1 ] diff --git a/newlinalg/test/constructors/matrix_tuple_constructor.morpho b/newlinalg/test/constructors/matrix_tuple_constructor.morpho index 48337f3f..7d400bdd 100644 --- a/newlinalg/test/constructors/matrix_tuple_constructor.morpho +++ b/newlinalg/test/constructors/matrix_tuple_constructor.morpho @@ -2,14 +2,14 @@ import newlinalg -var A = XMatrix(((1,2),(3,4))) +var A = Matrix(((1,2),(3,4))) print A // expect: [ 1 2 ] // expect: [ 3 4 ] // Mix Tuples and Lists -var B = XMatrix(([1,2],[3,4])) +var B = Matrix(([1,2],[3,4])) print B // expect: [ 1 2 ] diff --git a/newlinalg/test/constructors/matrix_vector_constructor.morpho b/newlinalg/test/constructors/matrix_vector_constructor.morpho index 1eb18c22..bf2e0b35 100644 --- a/newlinalg/test/constructors/matrix_vector_constructor.morpho +++ b/newlinalg/test/constructors/matrix_vector_constructor.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2) +var A = Matrix(2) print A // expect: [ 0 ] diff --git a/newlinalg/test/index/matrix_getcolumn.morpho b/newlinalg/test/index/matrix_getcolumn.morpho index 1a46ce72..59e613ae 100644 --- a/newlinalg/test/index/matrix_getcolumn.morpho +++ b/newlinalg/test/index/matrix_getcolumn.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0] = 1 A[0,1] = 2 A[1,0] = 3 diff --git a/newlinalg/test/index/matrix_getindex.morpho b/newlinalg/test/index/matrix_getindex.morpho index 90af1fd8..f49b9570 100644 --- a/newlinalg/test/index/matrix_getindex.morpho +++ b/newlinalg/test/index/matrix_getindex.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0] = 1 A[1,0] = 2 A[0,1] = 3 diff --git a/newlinalg/test/index/matrix_setcolumn.morpho b/newlinalg/test/index/matrix_setcolumn.morpho index b879d651..38e505ec 100644 --- a/newlinalg/test/index/matrix_setcolumn.morpho +++ b/newlinalg/test/index/matrix_setcolumn.morpho @@ -2,13 +2,13 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) -var b = XMatrix(2,1) +var b = Matrix(2,1) b[0] = 1 b[1] = 3 -var c = XMatrix(2,1) +var c = Matrix(2,1) c[0] = 2 c[1] = 4 diff --git a/newlinalg/test/index/matrix_setindex.morpho b/newlinalg/test/index/matrix_setindex.morpho index af43f9c7..abe9f6ca 100644 --- a/newlinalg/test/index/matrix_setindex.morpho +++ b/newlinalg/test/index/matrix_setindex.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0] = 1 A[0,1] = 2 A[1,0] = 3 diff --git a/newlinalg/test/index/matrix_setslice.morpho b/newlinalg/test/index/matrix_setslice.morpho index 093a8446..41280a84 100644 --- a/newlinalg/test/index/matrix_setslice.morpho +++ b/newlinalg/test/index/matrix_setslice.morpho @@ -1,9 +1,9 @@ // Copy elements of a Matrix using slices import newlinalg -var A = XMatrix(((1,2),(3,4))) +var A = Matrix(((1,2),(3,4))) -var B = XMatrix(4,4) +var B = Matrix(4,4) B[0..1, 0..1] = A print B @@ -12,7 +12,7 @@ print B // expect: [ 0 0 0 0 ] // expect: [ 0 0 0 0 ] -var C = XMatrix(4,4) +var C = Matrix(4,4) C[0..2:2, 0..2:2] = A print C // expect: [ 1 0 2 0 ] @@ -20,7 +20,7 @@ print C // expect: [ 3 0 4 0 ] // expect: [ 0 0 0 0 ] -var D = XMatrix(4,4) +var D = Matrix(4,4) D[1..2, 1..2] = A print D // expect: [ 0 0 0 0 ] @@ -28,7 +28,7 @@ print D // expect: [ 0 3 4 0 ] // expect: [ 0 0 0 0 ] -var E = XMatrix(4,4) +var E = Matrix(4,4) E[1..3:2, 1..3:2] = A print E // expect: [ 0 0 0 0 ] @@ -36,7 +36,7 @@ print E // expect: [ 0 0 0 0 ] // expect: [ 0 3 0 4 ] -var F = XMatrix(4,4) +var F = Matrix(4,4) F[0..1, 0] = A[0..1, 1] print F // expect: [ 2 0 0 0 ] diff --git a/newlinalg/test/index/matrix_slice.morpho b/newlinalg/test/index/matrix_slice.morpho index 0a8387b4..5f362fa0 100644 --- a/newlinalg/test/index/matrix_slice.morpho +++ b/newlinalg/test/index/matrix_slice.morpho @@ -1,7 +1,7 @@ // Slice a Matrix import newlinalg -var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) print A[0..1, 0..1] // expect: [ 1 2 ] diff --git a/newlinalg/test/index/matrix_slice_bounds.morpho b/newlinalg/test/index/matrix_slice_bounds.morpho index c5676056..819cef42 100644 --- a/newlinalg/test/index/matrix_slice_bounds.morpho +++ b/newlinalg/test/index/matrix_slice_bounds.morpho @@ -1,7 +1,7 @@ // Slice a Matrix out of bounds import newlinalg -var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) print A[0..5, 0..2] // expect error 'LnAlgMtrxIndxBnds' diff --git a/newlinalg/test/index/matrix_slice_infinite_range.morpho b/newlinalg/test/index/matrix_slice_infinite_range.morpho index b8724575..3a4466bd 100644 --- a/newlinalg/test/index/matrix_slice_infinite_range.morpho +++ b/newlinalg/test/index/matrix_slice_infinite_range.morpho @@ -1,7 +1,7 @@ // Slice a Matrix with a range that doesn't halt import newlinalg -var A = XMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) print A[0..3:-1, 0] // expect error 'LnAlgMtrxInvldArg' diff --git a/newlinalg/test/methods/matrix_count.morpho b/newlinalg/test/methods/matrix_count.morpho index 133144ae..b5a8c2fa 100644 --- a/newlinalg/test/methods/matrix_count.morpho +++ b/newlinalg/test/methods/matrix_count.morpho @@ -1,7 +1,7 @@ -// Count elements in XMatrix +// Count elements in Matrix import newlinalg -var A = XMatrix(2,3) +var A = Matrix(2,3) A[0,0]=1 A[0,1]=2 A[0,2]=3 diff --git a/newlinalg/test/methods/matrix_dimensions.morpho b/newlinalg/test/methods/matrix_dimensions.morpho index 4c72b37f..4712051e 100644 --- a/newlinalg/test/methods/matrix_dimensions.morpho +++ b/newlinalg/test/methods/matrix_dimensions.morpho @@ -1,10 +1,10 @@ -// Get dimensions of XMatrix +// Get dimensions of Matrix import newlinalg -var A = XMatrix(2,3) +var A = Matrix(2,3) print A.dimensions() // expect: (2, 3) -var a = XMatrix([[0.8, -0.4], [0.4, 0.8]]) +var a = Matrix([[0.8, -0.4], [0.4, 0.8]]) print a.dimensions() // expect: (2, 2) diff --git a/newlinalg/test/methods/matrix_eigensystem.morpho b/newlinalg/test/methods/matrix_eigensystem.morpho index 1651052c..1b2cbff7 100644 --- a/newlinalg/test/methods/matrix_eigensystem.morpho +++ b/newlinalg/test/methods/matrix_eigensystem.morpho @@ -1,7 +1,7 @@ // Eigenvalues and eigenvectors import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=0 A[0,1]=1 A[1,0]=1 @@ -10,7 +10,7 @@ A[1,1]=0 var es=A.eigensystem() print es -// expect: ((1, -1), ) +// expect: ((1, -1), ) print es[0] // expect: (1, -1) diff --git a/newlinalg/test/methods/matrix_eigenvalues.morpho b/newlinalg/test/methods/matrix_eigenvalues.morpho index 00141abc..0ec4f41c 100644 --- a/newlinalg/test/methods/matrix_eigenvalues.morpho +++ b/newlinalg/test/methods/matrix_eigenvalues.morpho @@ -1,7 +1,7 @@ // Eigenvalues import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=0 A[0,1]=1 A[1,0]=1 diff --git a/newlinalg/test/methods/matrix_enumerate.morpho b/newlinalg/test/methods/matrix_enumerate.morpho index ac2478cf..a6f7cf7a 100644 --- a/newlinalg/test/methods/matrix_enumerate.morpho +++ b/newlinalg/test/methods/matrix_enumerate.morpho @@ -2,7 +2,7 @@ import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0] = 1 A[1,0] = 2 A[0,1] = 3 diff --git a/newlinalg/test/methods/matrix_format.morpho b/newlinalg/test/methods/matrix_format.morpho index 591c6c76..06495b22 100644 --- a/newlinalg/test/methods/matrix_format.morpho +++ b/newlinalg/test/methods/matrix_format.morpho @@ -2,7 +2,7 @@ import newlinalg import constants -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=Pi/2 A[1,0]=Pi/2 diff --git a/newlinalg/test/methods/matrix_inner.morpho b/newlinalg/test/methods/matrix_inner.morpho index f37c665e..c5539cd9 100644 --- a/newlinalg/test/methods/matrix_inner.morpho +++ b/newlinalg/test/methods/matrix_inner.morpho @@ -1,13 +1,13 @@ // Inner product of XMatrices import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 A[1,1]=4 -var B = XMatrix(2,2) +var B = Matrix(2,2) B[0,0]=1 B[0,1]=0 B[1,0]=0 diff --git a/newlinalg/test/methods/matrix_inverse.morpho b/newlinalg/test/methods/matrix_inverse.morpho index f7f07541..2f269735 100644 --- a/newlinalg/test/methods/matrix_inverse.morpho +++ b/newlinalg/test/methods/matrix_inverse.morpho @@ -1,7 +1,7 @@ // Inverse import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 diff --git a/newlinalg/test/methods/matrix_inverse_singular.morpho b/newlinalg/test/methods/matrix_inverse_singular.morpho index 7180cd65..7428e58f 100644 --- a/newlinalg/test/methods/matrix_inverse_singular.morpho +++ b/newlinalg/test/methods/matrix_inverse_singular.morpho @@ -1,7 +1,7 @@ // Inverse import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=2 diff --git a/newlinalg/test/methods/matrix_norm.morpho b/newlinalg/test/methods/matrix_norm.morpho index a8d76cf2..179158c8 100644 --- a/newlinalg/test/methods/matrix_norm.morpho +++ b/newlinalg/test/methods/matrix_norm.morpho @@ -1,8 +1,8 @@ -// Norm of an XMatrix +// Norm of an Matrix import newlinalg import constants -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=-2 A[1,0]=3 diff --git a/newlinalg/test/methods/matrix_outer.morpho b/newlinalg/test/methods/matrix_outer.morpho index 0e49615e..a190ed5d 100644 --- a/newlinalg/test/methods/matrix_outer.morpho +++ b/newlinalg/test/methods/matrix_outer.morpho @@ -1,8 +1,8 @@ // Outer product of two vectors import newlinalg -var A = XMatrix((1,2,3)) -var B = XMatrix((4,5)) +var A = Matrix((1,2,3)) +var B = Matrix((4,5)) print A.outer(B) // expect: [ 4 5 ] diff --git a/newlinalg/test/methods/matrix_qr.morpho b/newlinalg/test/methods/matrix_qr.morpho index 79ac4847..50e1abcb 100644 --- a/newlinalg/test/methods/matrix_qr.morpho +++ b/newlinalg/test/methods/matrix_qr.morpho @@ -2,12 +2,12 @@ import newlinalg // Test with a square matrix (this one is singular, so R will have a zero on the diagonal) -var A = XMatrix(((1.0,2.0,3.0),(4.0,5.0,6.0),(7.0,8.0,9.0))) +var A = Matrix(((1.0,2.0,3.0),(4.0,5.0,6.0),(7.0,8.0,9.0))) var qr = A.qr() print qr -// expect: (, ) +// expect: (, ) var Q = qr[0] var R = qr[1] @@ -20,7 +20,7 @@ print R.dimensions() // Verify Q is orthogonal: Q^T * Q should be approximately I var QTQ = Q.transpose() * Q -var I = IdentityXMatrix(3) +var I = IdentityMatrix(3) print (QTQ - I).norm() < 1e-10 // expect: true @@ -46,7 +46,7 @@ print (QR - A).norm() < 1e-10 // expect: true // Test with a non-square matrix (tall matrix) -var B = XMatrix(4,2) +var B = Matrix(4,2) B[0,0] = 1.0 B[0,1] = 2.0 B[1,0] = 3.0 @@ -94,7 +94,7 @@ print R2_lower_norm < 1e-10 // expect: true // Test with a wide matrix -var C = XMatrix(2,4) +var C = Matrix(2,4) C[0,0] = 1.0 C[0,1] = 2.0 C[0,2] = 3.0 @@ -116,12 +116,12 @@ print R3.dimensions() // Verify Q3 is orthogonal var Q3TQ3 = Q3.transpose() * Q3 -var I2 = IdentityXMatrix(2) +var I2 = IdentityMatrix(2) print (Q3TQ3 - I2).norm() < 1e-10 // expect: true // Test with identity matrix -var I3 = IdentityXMatrix(3) +var I3 = IdentityMatrix(3) var qr4 = I3.qr() var Q4 = qr4[0] var R4 = qr4[1] diff --git a/newlinalg/test/methods/matrix_reshape.morpho b/newlinalg/test/methods/matrix_reshape.morpho index 55355085..f4825fd9 100644 --- a/newlinalg/test/methods/matrix_reshape.morpho +++ b/newlinalg/test/methods/matrix_reshape.morpho @@ -1,7 +1,7 @@ -// Reshape XMatrix +// Reshape Matrix import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[1,0]=2 A[0,1]=3 diff --git a/newlinalg/test/methods/matrix_roll.morpho b/newlinalg/test/methods/matrix_roll.morpho index 5e8c9aee..379cb426 100644 --- a/newlinalg/test/methods/matrix_roll.morpho +++ b/newlinalg/test/methods/matrix_roll.morpho @@ -1,7 +1,7 @@ // Roll contents of a matrix import newlinalg -var A = XMatrix(3,3) +var A = Matrix(3,3) var k=0 for (i in 0...3) for (j in 0...3) { A[i,j] = k; k+=1 } diff --git a/newlinalg/test/methods/matrix_sum.morpho b/newlinalg/test/methods/matrix_sum.morpho index 68294074..8f2e4fd1 100644 --- a/newlinalg/test/methods/matrix_sum.morpho +++ b/newlinalg/test/methods/matrix_sum.morpho @@ -1,7 +1,7 @@ // Sum import newlinalg -var A = XMatrix(3,2) +var A = Matrix(3,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 diff --git a/newlinalg/test/methods/matrix_svd.morpho b/newlinalg/test/methods/matrix_svd.morpho index 037c7f41..16bea32c 100644 --- a/newlinalg/test/methods/matrix_svd.morpho +++ b/newlinalg/test/methods/matrix_svd.morpho @@ -1,20 +1,20 @@ // Singular Value Decomposition import newlinalg -var A = XMatrix(((1,0),(0,2))) +var A = Matrix(((1,0),(0,2))) var svd = A.svd() print svd -// expect: (, (2, 1), ) +// expect: (, (2, 1), ) -print (svd[0] - XMatrix(((0,1),(1,0)))).norm() < 1e-10 +print (svd[0] - Matrix(((0,1),(1,0)))).norm() < 1e-10 // expect: true print svd[1] // expect: (2, 1) -print (svd[2] - XMatrix(((0,1),(1,0)))).norm() < 1e-10 +print (svd[2] - Matrix(((0,1),(1,0)))).norm() < 1e-10 // expect: true // Test reconstruction: U * S * V^T should approximately equal A @@ -23,7 +23,7 @@ var S = svd[1] var V = svd[2] // Create diagonal matrix from singular values -var Sdiag = XMatrix(2,2) +var Sdiag = Matrix(2,2) Sdiag[0,0] = S[0] Sdiag[1,1] = S[1] @@ -34,7 +34,7 @@ print (reconstructed - A).norm() < 1e-10 // expect: true // Test with a non-square matrix -var B = XMatrix(3,2) +var B = Matrix(3,2) B[0,0]=1 B[0,1]=0 B[1,0]=0 diff --git a/newlinalg/test/methods/matrix_trace.morpho b/newlinalg/test/methods/matrix_trace.morpho index dc70fcf5..5ee330b9 100644 --- a/newlinalg/test/methods/matrix_trace.morpho +++ b/newlinalg/test/methods/matrix_trace.morpho @@ -1,7 +1,7 @@ // Inverse import newlinalg -var A = XMatrix(2,2) +var A = Matrix(2,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 diff --git a/newlinalg/test/methods/matrix_transpose.morpho b/newlinalg/test/methods/matrix_transpose.morpho index 395fb0e2..a0454786 100644 --- a/newlinalg/test/methods/matrix_transpose.morpho +++ b/newlinalg/test/methods/matrix_transpose.morpho @@ -1,7 +1,7 @@ // Inverse import newlinalg -var A = XMatrix(3,2) +var A = Matrix(3,2) A[0,0]=1 A[0,1]=2 A[1,0]=3 diff --git a/src/linalg/newlinalg.c b/src/linalg/linalg.c similarity index 96% rename from src/linalg/newlinalg.c rename to src/linalg/linalg.c index 81beb96b..41b8fb6a 100644 --- a/src/linalg/newlinalg.c +++ b/src/linalg/linalg.c @@ -1,13 +1,13 @@ -/** @file newlinalg.c +/** @file linalg.c * @author T J Atherton * - * @brief New linear algebra library + * @brief Improved linear algebra library */ #define ACCELERATE_NEW_LAPACK #define MORPHO_INCLUDE_LINALG -#include "newlinalg.h" +#include "linalg.h" /* ------------------------------------------------------- * Errors diff --git a/src/linalg/newlinalg.h b/src/linalg/linalg.h similarity index 97% rename from src/linalg/newlinalg.h rename to src/linalg/linalg.h index c579c746..386c2efa 100644 --- a/src/linalg/newlinalg.h +++ b/src/linalg/linalg.h @@ -1,12 +1,12 @@ -/** @file newlinalg.h +/** @file linalg.h * @author T J Atherton * - * @brief New linear algebra library + * @brief Improved linear algebra library */ -#ifndef newlinalg_h -#define newlinalg_h +#ifndef linalg_h +#define linalg_h #include #include From 0841a3a7441b4bc73d5d6c4bd62749b6ed9509a3 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 21:52:47 -0500 Subject: [PATCH 100/156] Initial integration --- src/builtin/builtin.c | 2 +- src/builtin/functiondefs.c | 2 +- src/classes/classes.h | 2 +- src/geometry/field.c | 2 +- src/geometry/field.h | 2 +- src/geometry/functional.c | 2 +- src/geometry/integrate.c | 2 +- src/geometry/mesh.c | 2 +- src/geometry/mesh.h | 2 +- src/geometry/selection.c | 4 ++-- src/linalg/complexmatrix.c | 5 +---- src/linalg/linalg.c | 7 +------ src/linalg/linalg.h | 7 +++++++ src/linalg/matrix.c | 2 +- src/linalg/matrix.h | 1 - src/linalg/sparse.c | 2 +- src/linalg/sparse.h | 2 +- 17 files changed, 23 insertions(+), 25 deletions(-) diff --git a/src/builtin/builtin.c b/src/builtin/builtin.c index d880cfe3..705b3f8c 100644 --- a/src/builtin/builtin.c +++ b/src/builtin/builtin.c @@ -462,7 +462,7 @@ void builtin_initialize(void) { // Initialize linear algebra #ifdef MORPHO_INCLUDE_LINALG - matrix_initialize(); + linalg_initialize(); #endif #ifdef MORPHO_INCLUDE_SPARSE diff --git a/src/builtin/functiondefs.c b/src/builtin/functiondefs.c index 4211d84c..4b03e9d8 100644 --- a/src/builtin/functiondefs.c +++ b/src/builtin/functiondefs.c @@ -14,7 +14,7 @@ #include "common.h" #include "cmplx.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" #include "mesh.h" diff --git a/src/classes/classes.h b/src/classes/classes.h index 91b2994a..75d48dec 100644 --- a/src/classes/classes.h +++ b/src/classes/classes.h @@ -35,6 +35,6 @@ //#include "system.h" #include "json.h" -#include "matrix.h" +#include "linalg.h" #endif /* classes_h */ diff --git a/src/geometry/field.c b/src/geometry/field.c index e5931648..f9029ff8 100644 --- a/src/geometry/field.c +++ b/src/geometry/field.c @@ -11,7 +11,7 @@ #include "morpho.h" #include "classes.h" #include "common.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" #include "geometry.h" diff --git a/src/geometry/field.h b/src/geometry/field.h index 93ee56f0..47a868e6 100644 --- a/src/geometry/field.h +++ b/src/geometry/field.h @@ -12,7 +12,7 @@ #include "object.h" #include "mesh.h" -#include "matrix.h" +#include "linalg.h" #include /* ------------------------------------------------------- diff --git a/src/geometry/functional.c b/src/geometry/functional.c index ab571011..774f2d67 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -17,7 +17,7 @@ #include "threadpool.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" #include "geometry.h" diff --git a/src/geometry/integrate.c b/src/geometry/integrate.c index 34e379bf..5e8c8d83 100644 --- a/src/geometry/integrate.c +++ b/src/geometry/integrate.c @@ -14,7 +14,7 @@ #include "morpho.h" #include "classes.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" #include "geometry.h" diff --git a/src/geometry/mesh.c b/src/geometry/mesh.c index 903268a6..8dca11ba 100644 --- a/src/geometry/mesh.c +++ b/src/geometry/mesh.c @@ -13,7 +13,7 @@ #include "file.h" #include "parse.h" #include "sparse.h" -#include "matrix.h" +#include "linalg.h" #include "selection.h" // Temporary include diff --git a/src/geometry/mesh.h b/src/geometry/mesh.h index 0a530fa7..883b928e 100644 --- a/src/geometry/mesh.h +++ b/src/geometry/mesh.h @@ -12,7 +12,7 @@ #ifdef MORPHO_INCLUDE_GEOMETRY #include "varray.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" /* ------------------------------------------------------- diff --git a/src/geometry/selection.c b/src/geometry/selection.c index 38b1d66a..8fa67164 100644 --- a/src/geometry/selection.c +++ b/src/geometry/selection.c @@ -11,7 +11,7 @@ #include "object.h" #include "builtin.h" #include "classes.h" -#include "matrix.h" +#include "linalg.h" #include "sparse.h" #include "mesh.h" #include "selection.h" @@ -186,7 +186,7 @@ void selection_selectwithmatrix(vm *v, objectselection *sel, value fn, objectmat int nv = vert->ncols; if (matrix->ncols!=nv) { - morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return; } diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index 89f2d8b4..32cd5a57 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -4,12 +4,9 @@ * @brief New linear algebra library */ -#define ACCELERATE_NEW_LAPACK -#define MORPHO_INCLUDE_LINALG - #include -#include "newlinalg.h" +#include "linalg.h" #include "matrix.h" #include "complexmatrix.h" #include "format.h" diff --git a/src/linalg/linalg.c b/src/linalg/linalg.c index 41b8fb6a..d3e72d6b 100644 --- a/src/linalg/linalg.c +++ b/src/linalg/linalg.c @@ -4,9 +4,6 @@ * @brief Improved linear algebra library */ -#define ACCELERATE_NEW_LAPACK -#define MORPHO_INCLUDE_LINALG - #include "linalg.h" /* ------------------------------------------------------- @@ -33,7 +30,7 @@ void linalg_raiseerror(vm *v, linalgError_t err) { * Initialization and finalization * ------------------------------------------------------- */ -void newlinalg_initialize(void) { +void linalg_initialize(void) { matrix_initialize(); morpho_defineerror(LINALG_INCOMPATIBLEMATRICES, ERROR_HALT, LINALG_INCOMPATIBLEMATRICES_MSG); @@ -48,5 +45,3 @@ void newlinalg_initialize(void) { morpho_defineerror(LINALG_NORMARGS, ERROR_HALT, LINALG_NORMARGS_MSG); } -void newlinalg_finalize(void) { -} diff --git a/src/linalg/linalg.h b/src/linalg/linalg.h index 386c2efa..18dd197b 100644 --- a/src/linalg/linalg.h +++ b/src/linalg/linalg.h @@ -90,4 +90,11 @@ void linalg_raiseerror(vm *v, linalgError_t err); #include "matrix.h" #include "complexmatrix.h" + +/* ------------------------------------------------------- + * Initialization and finalization + * ------------------------------------------------------- */ + +void linalg_initialize(void); + #endif diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 8c725680..b38bf160 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -7,7 +7,7 @@ #define ACCELERATE_NEW_LAPACK #define MORPHO_INCLUDE_LINALG -#include "newlinalg.h" +#include "linalg.h" #include "format.h" /* ********************************************************************** diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 7fa15bd3..77c057e7 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -50,7 +50,6 @@ typedef struct { /** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ #define MATRIX_ISSMALL(m) (m->nrows*m->ncols #include "object.h" #include "morpho.h" -#include "matrix.h" +#include "linalg.h" /* ------------------------------------------------------- * Sparse objects From 253f8d7869fca06857ab4fd2bdb3720b0fbff713 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:01:27 -0500 Subject: [PATCH 101/156] Fix matrix library includes --- src/linalg/matrix.c | 2 -- src/linalg/matrix.h | 33 ++++++++++++++++++++++++++++++--- 2 files changed, 30 insertions(+), 5 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index b38bf160..1cec54e2 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -4,8 +4,6 @@ * @brief New matrices */ -#define ACCELERATE_NEW_LAPACK -#define MORPHO_INCLUDE_LINALG #include "linalg.h" #include "format.h" diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 77c057e7..8c0f3c76 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -1,12 +1,37 @@ /** @file matrix.h * @author T J Atherton * - * @brief New linear algebra library -*/ + * @brief Veneer class over the objectmatrix type that interfaces with blas and lapack + */ #ifndef matrix_h #define matrix_h +#include "build.h" +#ifdef MORPHO_INCLUDE_LINALG + +#include +#include "classes.h" +/** Use Apple's Accelerate library for LAPACK and BLAS */ +#ifdef __APPLE__ +#ifdef MORPHO_LINALG_USE_ACCELERATE +#define ACCELERATE_NEW_LAPACK +#include +#define MATRIX_LAPACK_PRESENT +#endif +#endif + +/** Otherwise, use LAPACKE */ +#ifndef MATRIX_LAPACK_PRESENT +#include +#include +#define MORPHO_LINALG_USE_LAPACKE +#define MATRIX_LAPACK_PRESENT +#endif + +#include "cmplx.h" +#include "list.h" + #define LINALG_MAXMATRIXDEFNS 4 /* ------------------------------------------------------- @@ -232,4 +257,6 @@ linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, Matrix void matrix_print(vm *v, objectmatrix *m); -#endif +#endif /* MORPHO_INCLUDE_LINALG */ + +#endif /* matrix_h */ From b36d1cceecf175e4a820f15e901174e0fa4276d2 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:02:50 -0500 Subject: [PATCH 102/156] Correct includes --- src/linalg/matrix.c | 11 ++++++++++- 1 file changed, 10 insertions(+), 1 deletion(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 1cec54e2..1e3f23a3 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -4,8 +4,15 @@ * @brief New matrices */ +#include "build.h" +#ifdef MORPHO_INCLUDE_LINALG -#include "linalg.h" +#include +#include "morpho.h" +#include "classes.h" + +#include "matrix.h" +#include "sparse.h" #include "format.h" /* ********************************************************************** @@ -1484,3 +1491,5 @@ void matrix_initialize(void) { complematrix_initialize(); } + +#endif /* MORPHO_INCLUDE_LINALG */ \ No newline at end of file From bd32f5c51796209f572e6388bca8e3bde9982f5d Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:11:18 -0500 Subject: [PATCH 103/156] Patch some API calls --- src/geometry/mesh.c | 14 +++++++------- src/geometry/selection.c | 4 +--- src/linalg/matrix.c | 8 +++++++- src/linalg/matrix.h | 1 + 4 files changed, 16 insertions(+), 11 deletions(-) diff --git a/src/geometry/mesh.c b/src/geometry/mesh.c index 8dca11ba..150174df 100644 --- a/src/geometry/mesh.c +++ b/src/geometry/mesh.c @@ -79,7 +79,7 @@ objectmesh *object_newmesh(unsigned int dim, unsigned int nv, double *v) { new->dim=dim; new->conn=NULL; - new->vert=object_newmatrix(dim, nv, false); + new->vert=matrix_new(dim, nv, false); new->link=NULL; if (new->vert) { mesh_link(new, (object *) new->vert); @@ -129,7 +129,7 @@ void mesh_delink(objectmesh *mesh, object *obj) { /** Gets vertex coordinates */ bool mesh_getvertexcoordinates(objectmesh *mesh, elementid id, double *out) { double *coords; - if (matrix_getcolumn(mesh->vert, id, &coords)) { + if (matrix_getcolumnptr(mesh->vert, id, &coords)==LINALGERR_OK) { for (unsigned int i=0; idim; i++) out[i]=coords[i]; return true; } @@ -139,7 +139,7 @@ bool mesh_getvertexcoordinates(objectmesh *mesh, elementid id, double *out) { /** Gets vertex coordinates as a list */ bool mesh_getvertexcoordinatesaslist(objectmesh *mesh, elementid id, double **out) { double *coords=NULL; - if (matrix_getcolumn(mesh->vert, id, &coords)) { + if (matrix_getcolumnptr(mesh->vert, id, &coords)==LINALGERR_OK) { *out=coords; } return coords; @@ -154,7 +154,7 @@ bool mesh_setvertexcoordinates(objectmesh *mesh, elementid id, double *x) {; bool mesh_getvertexcoordinatesasvalues(objectmesh *mesh, elementid id, value *val) { double *x=NULL; // The vertex positions - bool success=matrix_getcolumn(mesh->vert, id, &x); + bool success=(matrix_getcolumnptr(mesh->vert, id, &x)==LINALGERR_OK); if (success) { for (unsigned int i=0; idim; i++) val[i]=MORPHO_FLOAT(x[i]); @@ -175,7 +175,7 @@ bool mesh_nearestvertex(objectmesh *mesh, double *x, elementid *id, double *sepa elementid bestid=0; for (elementid i=0; ivert, i, &vx)) return false; + if (matrix_getcolumnptr(mesh->vert, i, &vx)!=LINALGERR_OK) return false; sep=0; for (int k=0; kdim; k++) sep+=(vx[k]-x[k])*(vx[k]-x[k]); if (i==0 || sepvert, id, &vals)) { - objectmatrix *new=object_newmatrix(m->dim, 1, true); + if (matrix_getcolumnptr(m->vert, id, &vals)) { + objectmatrix *new=matrix_new(m->dim, 1, true); if (new) { matrix_setcolumn(new, 0, vals); out=MORPHO_OBJECT(new); diff --git a/src/geometry/selection.c b/src/geometry/selection.c index 8fa67164..7af5ab7c 100644 --- a/src/geometry/selection.c +++ b/src/geometry/selection.c @@ -196,9 +196,7 @@ void selection_selectwithmatrix(vm *v, objectselection *sel, value fn, objectmat value ret=MORPHO_NIL; // Return value for (elementid i=0; i=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; @@ -1492,4 +1498,4 @@ void matrix_initialize(void) { complematrix_initialize(); } -#endif /* MORPHO_INCLUDE_LINALG */ \ No newline at end of file +#endif /* MORPHO_INCLUDE_LINALG */ diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 8c0f3c76..207aed96 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -254,6 +254,7 @@ linalgError_t matrix_qr(objectmatrix *a, objectmatrix *q, objectmatrix *r); linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); +linalgError_t matrix_getcolumnptr(objectmatrix *matrix, MatrixIdx_t col, double **value); void matrix_print(vm *v, objectmatrix *m); From dd4b1188b8c7df7a88ecc519cd4fda39fca682dc Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:25:15 -0500 Subject: [PATCH 104/156] matrix_zero and other API patches --- src/geometry/integrate.c | 12 ++++++------ src/linalg/complexmatrix.c | 2 -- src/linalg/matrix.c | 8 +++++++- src/linalg/matrix.h | 3 +++ 4 files changed, 16 insertions(+), 9 deletions(-) diff --git a/src/geometry/integrate.c b/src/geometry/integrate.c index 5e8c8d83..1cc90c62 100644 --- a/src/geometry/integrate.c +++ b/src/geometry/integrate.c @@ -24,7 +24,7 @@ bool integrate_recognizequantities(unsigned int nquantity, value *quantity, valu if (MORPHO_ISFLOAT(quantity[i])) { out[i]=MORPHO_FLOAT(0); } else if (MORPHO_ISMATRIX(quantity[i])) { - out[i]=MORPHO_OBJECT(object_clonematrix(MORPHO_GETMATRIX(quantity[i]))); + out[i]=MORPHO_OBJECT(matrix_clone(MORPHO_GETMATRIX(quantity[i]))); } else return false; } } @@ -84,7 +84,7 @@ void integrate_interpolatequantitiesline(unsigned int dim, double t, unsigned in *out=(MORPHO_ISMATRIX(qout[i]) ? MORPHO_GETMATRIX(qout[i]): NULL); if (!out) { - out = object_clonematrix(m0); + out = matrix_clone(m0); qout[i]=MORPHO_OBJECT(out); } @@ -265,7 +265,7 @@ void integrate_interpolatequantitiestri(unsigned int dim, double *lambda, unsign *out=(MORPHO_ISMATRIX(qout[i]) ? MORPHO_GETMATRIX(qout[i]): NULL); if (!out) { - out = object_clonematrix(m0); + out = matrix_clone(m0); qout[i]=MORPHO_OBJECT(out); } @@ -603,7 +603,7 @@ void integrate_interpolatequantitiesvol(unsigned int dim, double *lambda, unsign *out=(MORPHO_ISMATRIX(qout[i]) ? MORPHO_GETMATRIX(qout[i]): NULL); if (!out) { - out = object_clonematrix(m0); + out = matrix_clone(m0); qout[i]=MORPHO_OBJECT(out); } @@ -2228,7 +2228,7 @@ void integrator_initializequantities(integrator *integrate, int nq, quantity *qu objectmatrix *m = MORPHO_GETMATRIX(q); quantity[i].ndof=matrix_countdof(m); - objectmatrix *new = object_clonematrix(m); // Use a copy of the matrix + objectmatrix *new = matrix_clone(m); // Use a copy of the matrix integrate->qval[i]=MORPHO_OBJECT(new); } else return; } @@ -2396,7 +2396,7 @@ bool integrator_sumquantityweighted(int n, double *wts, value *q, value *out) { } else if (MORPHO_ISMATRIX(q[0])) { objectmatrix *sum = MORPHO_GETMATRIX(*out); matrix_zero(sum); - for (int j=0; j #include "linalg.h" -#include "matrix.h" -#include "complexmatrix.h" #include "format.h" #include "cmplx.h" diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index c2a1f6d8..1cdb66f8 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -441,10 +441,16 @@ void matrix_scale(objectmatrix *x, double scale) { cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); } +/** Loads the zero matrix a <- 0 */ +linalgError_t matrix_zero(objectmatrix *x) { + memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols*x->nvals); + return LINALGERR_OK; +} + /** Loads the identity matrix a <- I(n) */ linalgError_t matrix_identity(objectmatrix *x) { if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; - memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); + matrix_zero(x); for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; return LINALGERR_OK; } diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 207aed96..d777890f 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -32,6 +32,8 @@ #include "cmplx.h" #include "list.h" +#include "linalg.h" + #define LINALG_MAXMATRIXDEFNS 4 /* ------------------------------------------------------- @@ -240,6 +242,7 @@ objectmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, Ma linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y); linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y); void matrix_scale(objectmatrix *x, double scale); +linalgError_t matrix_zero(objectmatrix *x); linalgError_t matrix_identity(objectmatrix *x); linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double beta, objectmatrix *z); linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta); From a4755c72c6bab5d051e90460bf049623899077db Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:28:16 -0500 Subject: [PATCH 105/156] Correct output type --- src/geometry/field.c | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/src/geometry/field.c b/src/geometry/field.c index f9029ff8..27695ebd 100644 --- a/src/geometry/field.c +++ b/src/geometry/field.c @@ -485,21 +485,21 @@ unsigned int field_dofforgrade(objectfield *f, grade g) { /** Adds two fields together */ bool field_add(objectfield *left, objectfield *right, objectfield *out) { - return (matrix_add(&left->data, &right->data, &out->data)==MATRIX_OK); + return (matrix_add(&left->data, &right->data, &out->data)==LINALGERR_OK); } /** Subtracts one field from another */ bool field_sub(objectfield *left, objectfield *right, objectfield *out) { - return (matrix_sub(&left->data, &right->data, &out->data)==MATRIX_OK); + return (matrix_sub(&left->data, &right->data, &out->data)==LINALGERR_OK); } /** Accumulate, i.e. a <- a + lambda*b */ bool field_accumulate(objectfield *left, double lambda, objectfield *right) { - return (matrix_accumulate(&left->data, lambda, &right->data)==MATRIX_OK); + return (matrix_accumulate(&left->data, lambda, &right->data)==LINALGERR_OK); } bool field_inner(objectfield *left, objectfield *right, double *out) { - return (matrix_inner(&left->data, &right->data, out)==MATRIX_OK); + return (matrix_inner(&left->data, &right->data, out)==LINALGERR_OK); } /** Calls a function fn on every element of a field, optionally with other fields as arguments */ @@ -685,7 +685,7 @@ value Field_assign(vm *v, int nargs, value *args) { } else if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - if (matrix_copy(b, &a->data)!=MATRIX_OK) morpho_runtimeerror(v, FIELD_INCOMPATIBLEMATRICES); + if (matrix_copy(b, &a->data)!=LINALGERR_OK) morpho_runtimeerror(v, FIELD_INCOMPATIBLEMATRICES); } else morpho_runtimeerror(v, FIELD_ARITHARGS); return MORPHO_NIL; @@ -726,7 +726,7 @@ value Field_addr(vm *v, int nargs, value *args) { if (i==0) { out=MORPHO_SELF(args); } else UNREACHABLE("Right addition to non-zero value."); - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); return out; } @@ -808,7 +808,7 @@ value Field_mul(vm *v, int nargs, value *args) { morpho_bindobjects(v, 1, &out); } } - } else morpho_runtimeerror(v, MATRIX_ARITHARGS); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); return out; } @@ -943,7 +943,7 @@ value Field_linearize(vm *v, int nargs, value *args) { objectfield *f=MORPHO_GETFIELD(MORPHO_SELF(args)); value out = MORPHO_NIL; - objectmatrix *m=object_clonematrix(&f->data); + objectmatrix *m=matrix_clone(&f->data); if (m) { out = MORPHO_OBJECT(m); morpho_bindobjects(v, 1, &out); From fa1a2d8b2d47f0b43bc92a7c4b23c6f43fa1fdf6 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:34:23 -0500 Subject: [PATCH 106/156] Patch field arithmetic functions --- src/geometry/field.c | 8 +++++--- src/linalg/matrix.c | 2 +- 2 files changed, 6 insertions(+), 4 deletions(-) diff --git a/src/geometry/field.c b/src/geometry/field.c index 27695ebd..32bd5b26 100644 --- a/src/geometry/field.c +++ b/src/geometry/field.c @@ -485,17 +485,19 @@ unsigned int field_dofforgrade(objectfield *f, grade g) { /** Adds two fields together */ bool field_add(objectfield *left, objectfield *right, objectfield *out) { - return (matrix_add(&left->data, &right->data, &out->data)==LINALGERR_OK); + return (matrix_copy(&left->data, &out->data)==LINALGERR_OK && + matrix_axpy(1.0, &right->data, &out->data)==LINALGERR_OK); } /** Subtracts one field from another */ bool field_sub(objectfield *left, objectfield *right, objectfield *out) { - return (matrix_sub(&left->data, &right->data, &out->data)==LINALGERR_OK); + return (matrix_copy(&left->data, &out->data)==LINALGERR_OK && + matrix_axpy(-1.0, &right->data, &out->data)==LINALGERR_OK); } /** Accumulate, i.e. a <- a + lambda*b */ bool field_accumulate(objectfield *left, double lambda, objectfield *right) { - return (matrix_accumulate(&left->data, lambda, &right->data)==LINALGERR_OK); + return (matrix_axpy(lambda, &right->data, &left->data)==LINALGERR_OK); } bool field_inner(objectfield *left, objectfield *right, double *out) { diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 1cdb66f8..38a6866e 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1501,7 +1501,7 @@ void matrix_initialize(void) { morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); - complematrix_initialize(); + complexmatrix_initialize(); } #endif /* MORPHO_INCLUDE_LINALG */ From 33b360468eae86e04db445d1949fb888012f9b90 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:43:05 -0500 Subject: [PATCH 107/156] matrix_countdof --- src/linalg/matrix.c | 5 +++++ src/linalg/matrix.h | 4 ++++ 2 files changed, 9 insertions(+) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 38a6866e..0c515d55 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -416,6 +416,11 @@ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b return LINALGERR_OK; } +/** Counts the number of dofs in a matrix */ +MatrixCount_t matrix_countdof(objectmatrix *a) { + return a->ncols*a->nrows*a->nvals; +} + /* ---------------------- * Arithmetic operations * ---------------------- */ diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index d777890f..dbcbcdff 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -239,6 +239,8 @@ objectmatrix *matrix_clone(objectmatrix *in); objectmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals); objectmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals); +MatrixCount_t matrix_countdof(objectmatrix *a); + linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y); linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y); void matrix_scale(objectmatrix *x, double scale); @@ -248,6 +250,8 @@ linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta); linalgError_t matrix_transpose(objectmatrix *x, objectmatrix *y); +linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out); + linalgError_t matrix_solve(objectmatrix *a, objectmatrix *b); linalgError_t matrix_svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt); From df1e43099569fa6d73e311abd0a42df37aaf7b80 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 14 Jan 2026 22:47:02 -0500 Subject: [PATCH 108/156] Matrix operations in functional.c --- src/geometry/functional.c | 78 +++++++++++++++++++-------------------- 1 file changed, 39 insertions(+), 39 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 774f2d67..933e06f9 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -154,8 +154,8 @@ bool functional_symmetrysumforces(objectmesh *mesh, objectmatrix *frc) { double *fi, *fj, fsum[mesh->dim]; while (sparsedok_loop(&s->dok, &ctr, &i, &j)) { - if (matrix_getcolumn(frc, i, &fi) && - matrix_getcolumn(frc, j, &fj)) { + if (matrix_getcolumnptr(frc, i, &fi) && + matrix_getcolumnptr(frc, j, &fj)) { for (unsigned int k=0; kdim; k++) fsum[k]=fi[k]+fj[k]; matrix_setcolumn(frc, i, fsum); @@ -279,7 +279,7 @@ bool functional_mapintegrandX(vm *v, functional_mapinfo *info, value *out) { /* Create the output matrix */ if (n>0) { - new=object_newmatrix(1, n, true); + new=matrix_new(1, n, true); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } } @@ -357,7 +357,7 @@ bool functional_mapgradientX(vm *v, functional_mapinfo *info, value *out) { /* Create the output matrix */ if (n>0) { - frc=object_newmatrix(mesh->vert->nrows, mesh->vert->ncols, true); + frc=matrix_new(mesh->vert->nrows, mesh->vert->ncols, true); if (!frc) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } } @@ -566,7 +566,7 @@ bool functional_mapnumericalgradientX(vm *v, functional_mapinfo *info, value *ou /* Create the output matrix */ if (n>0) { - frc=object_newmatrix(mesh->vert->nrows, mesh->vert->ncols, true); + frc=matrix_new(mesh->vert->nrows, mesh->vert->ncols, true); if (!frc) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } } @@ -1047,7 +1047,7 @@ bool functional_mapintegrand(vm *v, functional_mapinfo *info, value *out) { /* Create output matrix */ if (task[0].nel>0) { - new=object_newmatrix(1, task[0].nel, true); + new=matrix_new(1, task[0].nel, true); if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } } @@ -1093,7 +1093,7 @@ bool functional_mapgradient(vm *v, functional_mapinfo *info, value *out) { /* Create output matrix */ for (int i=0; imesh->vert->nrows, info->mesh->vert->ncols, true); + new[i]=matrix_new(info->mesh->vert->nrows, info->mesh->vert->ncols, true); if (!new[i]) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto functional_mapgradient_cleanup; } task[i].mapfn=(functional_mapfn *) info->grad; @@ -1195,12 +1195,12 @@ bool functional_mapnumericalgradient(vm *v, functional_mapinfo *info, value *out for (int i=0; imesh->vert->nrows, info->mesh->vert->ncols, true); + new[i]=matrix_new(info->mesh->vert->nrows, info->mesh->vert->ncols, true); if (!new[i]) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto functional_mapgradient_cleanup; } // Clone the vertex matrix for each thread meshclones[i]=*info->mesh; - meshclones[i].vert=object_clonematrix(info->mesh->vert); + meshclones[i].vert=matrix_clone(info->mesh->vert); task[i].mesh=&meshclones[i]; task[i].ref=(void *) info; // Use this to pass the info structure @@ -1561,7 +1561,7 @@ bool functional_mapnumericalhessian(vm *v, functional_mapinfo *info, value *out) // Clone the vertex matrix for each thread meshclones[i]=*info->mesh; - meshclones[i].vert=object_clonematrix(info->mesh->vert); + meshclones[i].vert=matrix_clone(info->mesh->vert); if (!meshclones[i].vert) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto functional_maphessian_cleanup; } task[i].mesh=&meshclones[i]; @@ -1713,7 +1713,7 @@ bool functional_elementgradient(vm *v, objectmesh *mesh, grade g, elementid id, bool length_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, double *out) { if (nv!=2) return false; double *x[nv], s0[mesh->dim]; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_vecsub(mesh->dim, x[1], x[0], s0); @@ -1724,7 +1724,7 @@ bool length_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, v /** Calculate scaled gradient */ bool length_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, objectmatrix *frc, double scale) { double *x[nv], s0[mesh->dim], norm; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_vecsub(mesh->dim, x[1], x[0], s0); norm=functional_vecnorm(mesh->dim, s0); @@ -1764,7 +1764,7 @@ MORPHO_ENDCLASS /** Calculate area enclosed */ bool areaenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, double *out) { double *x[nv], cx[mesh->dim], normcx; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); if (mesh->dim==2) { functional_veccross2d(x[0], x[1], cx); @@ -1783,7 +1783,7 @@ bool areaenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int * bool areaenclosed_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, objectmatrix *frc) { double *x[nv], cx[3], s[3]; double norm; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); if (mesh->dim==3) { functional_veccross(x[0], x[1], cx); @@ -1829,7 +1829,7 @@ bool area_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, voi if (nv!=3) return false; double *x[nv], s0[3], s1[3], cx[3]; for (int j=0; j<3; j++) { s0[j]=0; s1[j]=0; cx[j]=0; } - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_vecsub(mesh->dim, x[1], x[0], s0); functional_vecsub(mesh->dim, x[2], x[1], s1); @@ -1845,7 +1845,7 @@ bool area_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid double *x[nv], s0[3], s1[3], s01[3], s010[3], s011[3]; double norm; for (int j=0; j<3; j++) { s0[j]=0; s1[j]=0; s01[j]=0; s010[j]=0; s011[j]=0; } - for (int j=0; jvert, vid[j], &x[j])) return false; + for (int j=0; jvert, vid[j], &x[j])) return false; functional_vecsub(mesh->dim, x[1], x[0], s0); functional_vecsub(mesh->dim, x[2], x[1], s1); @@ -1895,7 +1895,7 @@ MORPHO_ENDCLASS /** Calculate enclosed volume */ bool volumeenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, double *out) { double *x[nv], cx[mesh->dim]; - for (int j=0; jvert, vid[j], &x[j])) return false; + for (int j=0; jvert, vid[j], &x[j])) return false; functional_veccross(x[0], x[1], cx); @@ -1906,7 +1906,7 @@ bool volumeenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int /** Calculate gradient */ bool volumeenclosed_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, objectmatrix *frc) { double *x[nv], cx[mesh->dim], dot; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_veccross(x[0], x[1], cx); dot=functional_vecdot(mesh->dim, cx, x[2]); @@ -1949,7 +1949,7 @@ MORPHO_ENDCLASS /** Calculate enclosed volume */ bool volume_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, double *out) { double *x[nv], s10[mesh->dim], s20[mesh->dim], s30[mesh->dim], cx[mesh->dim]; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_vecsub(mesh->dim, x[1], x[0], s10); functional_vecsub(mesh->dim, x[2], x[0], s20); @@ -1965,7 +1965,7 @@ bool volume_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, v bool volume_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, objectmatrix *frc, double scale) { double *x[nv], s10[mesh->dim], s20[mesh->dim], s30[mesh->dim]; double s31[mesh->dim], s21[mesh->dim], cx[mesh->dim], uu; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j]); functional_vecsub(mesh->dim, x[1], x[0], s10); functional_vecsub(mesh->dim, x[2], x[0], s20); @@ -2034,7 +2034,7 @@ bool scalarpotential_integrand(vm *v, objectmesh *mesh, elementid id, int nv, in value args[mesh->dim]; value ret; - matrix_getcolumn(mesh->vert, id, &x); + matrix_getcolumnptr(mesh->vert, id, &x); for (int i=0; idim; i++) args[i]=MORPHO_FLOAT(x[i]); if (morpho_call(v, fn, mesh->dim, args, &ret)) { @@ -2051,7 +2051,7 @@ bool scalarpotential_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int value args[mesh->dim]; value ret; - matrix_getcolumn(mesh->vert, id, &x); + matrix_getcolumnptr(mesh->vert, id, &x); for (int i=0; idim; i++) args[i]=MORPHO_FLOAT(x[i]); if (morpho_call(v, fn, mesh->dim, args, &ret)) { @@ -2157,7 +2157,7 @@ void linearelasticity_calculategram(objectmatrix *vert, int dim, int nv, int *vi double *x[nv], // Positions of vertices s[gdim][nv]; // Side vectors - for (int j=0; j for (int i=0; ielements[i+j*gdim]=functional_vecdot(dim, s[i], s[j]); @@ -2180,8 +2180,8 @@ bool linearelasticity_integrand(vm *v, objectmesh *mesh, elementid id, int nv, i linearelasticity_calculategram(info->refmesh->vert, mesh->dim, nv, vid, &gramref); linearelasticity_calculategram(mesh->vert, mesh->dim, nv, vid, &gramdef); - if (matrix_inverse(&gramref, &q)!=MATRIX_OK) return false; - if (matrix_mul(&gramdef, &q, &r)!=MATRIX_OK) return false; + if (matrix_inverse(&gramref, &q)!=LINALGERR_OK) return false; + if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return false; matrix_identity(&cg); matrix_scale(&cg, -0.5); @@ -2917,7 +2917,7 @@ bool linetorsionsq_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int /* We now have an ordered list of vertices. Get the vertex positions */ double *x[6]; - for (int i=0; i<6; i++) matrix_getcolumn(mesh->vert, vlist[i], &x[i]); + for (int i=0; i<6; i++) matrix_getcolumnptr(mesh->vert, vlist[i], &x[i]); double A[3], B[3], C[3], crossAB[3], crossBC[3]; functional_vecsub(3, x[1], x[0], A); @@ -3081,7 +3081,7 @@ bool meancurvaturesq_integrand(vm *v, objectmesh *mesh, elementid id, int nv, in double *x[3], s0[3], s1[3], s01[3], s101[3]; double norm; - for (int j=0; j<3; j++) matrix_getcolumn(mesh->vert, vids[j], &x[j]); + for (int j=0; j<3; j++) matrix_getcolumnptr(mesh->vert, vids[j], &x[j]); /* s0 = x1-x0; s1 = x2-x1 */ functional_vecsub(mesh->dim, x[1], x[0], s0); @@ -3155,7 +3155,7 @@ bool gausscurvature_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int if (!curvature_ordervertices(&synid, nvert, vids)) goto gausscurv_cleanup; double *x[3], s0[3], s1[3], s01[3]; - for (int j=0; j<3; j++) matrix_getcolumn(mesh->vert, vids[j], &x[j]); + for (int j=0; j<3; j++) matrix_getcolumnptr(mesh->vert, vids[j], &x[j]); /* s0 = x1-x0; s1 = x2-x0 */ functional_vecsub(mesh->dim, x[1], x[0], s0); @@ -4003,7 +4003,7 @@ void integral_evaluatetangent(vm *v, value *out) { int dim = elref->mesh->dim; - objectmatrix *mtangent = object_newmatrix(dim, 1, false); + objectmatrix *mtangent = matrix_new(dim, 1, false); if (!mtangent) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return; @@ -4040,7 +4040,7 @@ void integral_evaluatenormal(vm *v, value *out) { int dim = elref->mesh->dim; double s0[dim], s1[dim]; - objectmatrix *mnormal = object_newmatrix(dim, 1, false); + objectmatrix *mnormal = matrix_new(dim, 1, false); if (!mnormal) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return; @@ -4086,7 +4086,7 @@ bool integral_prepareinvjacobian(unsigned int dim, grade g, double **x, objectma if (g==dim) { objectmatrix smat = MORPHO_STATICMATRIX(s, dim, dim); - success=(matrix_inverse(&smat, invj)==MATRIX_OK); + success=(matrix_inverse(&smat, invj)==LINALGERR_OK); } else if (g==1) { double s01norm = functional_vecdot(dim, s, s); if (s01norm>0) { @@ -4117,7 +4117,7 @@ bool integral_prepareinvjacobian(unsigned int dim, grade g, double **x, objectma /** Allocate suitable storage for the gradient */ bool integral_gradalloc(int dim, value prototype, value *out) { if (MORPHO_ISNIL(prototype)) { // Scalar - objectmatrix *mgrad=object_newmatrix(dim, 1, false); + objectmatrix *mgrad=matrix_new(dim, 1, false); if (mgrad) *out = MORPHO_OBJECT(mgrad); return mgrad; } else if (MORPHO_ISMATRIX(prototype)) { @@ -4135,7 +4135,7 @@ bool integral_gradsuminit(int i, value prototype, value dest, value *sum) { if (i>=list_length(lst)) { objectmatrix *prmat = MORPHO_GETMATRIX(prototype); - objectmatrix *new = object_newmatrix(prmat->nrows, prmat->ncols, true); + objectmatrix *new = matrix_new(prmat->nrows, prmat->ncols, true); if (!new) return false; *sum = MORPHO_OBJECT(new); list_append(lst, *sum); @@ -4169,7 +4169,7 @@ bool integral_oldgradcopy(int dim, int ndof, double *grad, value prototype, valu value el; if (i>=list_length(lst)) { - mgrad=object_newmatrix(proto->nrows, proto->ncols, false); // Should copy prototype dimensions! + mgrad=matrix_new(proto->nrows, proto->ncols, false); // Should copy prototype dimensions! if (mgrad) { for (int k=0; kelements[k]=grad[k*dim+i]; list_append(lst, MORPHO_OBJECT(mgrad)); @@ -4219,7 +4219,7 @@ bool integral_evaluategradient(vm *v, value q, value *out) { // Evaluate gradient if (MORPHO_ISFESPACE(fld->fnspc)) { if (!elref->invj) { - elref->invj=object_newmatrix(elref->g, elref->mesh->dim, false); + elref->invj=matrix_new(elref->g, elref->mesh->dim, false); if (elref->invj) { integral_prepareinvjacobian(elref->mesh->dim, elref->g, elref->vertexposn, elref->invj); @@ -4241,7 +4241,7 @@ bool integral_evaluategradient(vm *v, value q, value *out) { double fmatdata[nnodes * dim]; objectmatrix fmat = MORPHO_STATICMATRIX(fmatdata, nnodes, dim); - if (matrix_mul(&gmat, elref->invj, &fmat)!=MATRIX_OK) { + if (matrix_mul(&gmat, elref->invj, &fmat)!=LINALGERR_OK) { morpho_runtimeerror(v, INTEGRAL_GRDEVL); return false; } @@ -4302,7 +4302,7 @@ void integral_evaluatecg(vm *v, value *out) { int gdim=elref->nv-1; // Dimension of Gram matrix - objectmatrix *cg=object_newmatrix(gdim, gdim, true); + objectmatrix *cg=matrix_new(gdim, gdim, true); if (!cg) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return; } double gramrefel[gdim*gdim], gramdefel[gdim*gdim], qel[gdim*gdim], rel[gdim*gdim]; @@ -4314,8 +4314,8 @@ void integral_evaluatecg(vm *v, value *out) { linearelasticity_calculategram(elref->iref->mref->vert, elref->mesh->dim, elref->nv, elref->vid, &gramref); linearelasticity_calculategram(elref->mesh->vert, elref->mesh->dim, elref->nv, elref->vid, &gramdef); - if (matrix_inverse(&gramref, &q)!=MATRIX_OK) return; - if (matrix_mul(&gramdef, &q, &r)!=MATRIX_OK) return; + if (matrix_inverse(&gramref, &q)!=LINALGERR_OK) return; + if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return; matrix_identity(cg); matrix_scale(cg, -0.5); From 2d712419a9249d13f2cf560b33ff151d6dbd8c1f Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 08:18:42 -0500 Subject: [PATCH 109/156] Conversion of functional.c matrix_ calls to new API --- src/geometry/functional.c | 31 ++++++++++++++++--------------- src/linalg/matrix.c | 4 ++++ src/linalg/matrix.h | 8 ++++++++ 3 files changed, 28 insertions(+), 15 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 933e06f9..782d9de5 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -1103,7 +1103,7 @@ bool functional_mapgradient(vm *v, functional_mapinfo *info, value *out) { functional_parallelmap(ntask, task); /* Then add up all the matrices */ - for (int i=1; isym==SYMMETRY_ADD) functional_symmetrysumforces(info->mesh, new[0]); @@ -1211,7 +1211,7 @@ bool functional_mapnumericalgradient(vm *v, functional_mapinfo *info, value *out functional_parallelmap(ntask, task); /* Then add up all the matrices */ - for (int i=1; idata, &new[1]->data, &new[0]->data); + for (int i=1; idata, &new[0]->data); // TODO: Use symmetry actions //if (info->sym==SYMMETRY_ADD) functional_symmetrysumforces(info->mesh, new[0]); @@ -1394,7 +1394,7 @@ bool functional_mapnumericalfieldgradient(vm *v, functional_mapinfo *info, value functional_parallelmap(ntask, task); /* Then add up all the fields */ - for (int i=1; idata, &new[i]->data, &new[0]->data); + for (int i=1; idata, &new[0]->data); success=true; @@ -2180,16 +2180,17 @@ bool linearelasticity_integrand(vm *v, objectmesh *mesh, elementid id, int nv, i linearelasticity_calculategram(info->refmesh->vert, mesh->dim, nv, vid, &gramref); linearelasticity_calculategram(mesh->vert, mesh->dim, nv, vid, &gramdef); - if (matrix_inverse(&gramref, &q)!=LINALGERR_OK) return false; + if (matrix_copy(&gramref, &q)!=LINALGERR_OK) return false; + if (matrix_inverse(&q)!=LINALGERR_OK) return false; if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return false; matrix_identity(&cg); matrix_scale(&cg, -0.5); - matrix_accumulate(&cg, 0.5, &r); + matrix_axpy(0.5, &r, &cg); // y <- alpha*x + y double trcg=0.0, trcgcg=0.0; matrix_trace(&cg, &trcg); - + matrix_mul(&cg, &cg, &r); matrix_trace(&r, &trcgcg); @@ -2559,7 +2560,7 @@ bool equielement_prepareref(objectinstance *self, objectmesh *mesh, grade g, obj MORPHO_ISMATRIX(weight) ) { ref->weight=MORPHO_GETMATRIX(weight); if (ref->weight) { - ref->mean=matrix_sum(ref->weight); + matrix_sum(ref->weight, &ref->mean); ref->mean/=ref->weight->ncols; } } @@ -3328,18 +3329,16 @@ bool gradsq_evaluategradient3d(objectmesh *mesh, objectfield *field, int nv, int objectmatrix Mt = MORPHO_STATICMATRIX(xtarray, mesh->dim, mesh->dim); matrix_transpose(&M, &Mt); - double farray[nentries*mesh->dim]; // Field elements - objectmatrix frhs = MORPHO_STATICMATRIX(farray, mesh->dim, nentries); objectmatrix grad = MORPHO_STATICMATRIX(out, mesh->dim, nentries); // Loop over elements of the field for (unsigned int i=0; idim; j++) farray[i*mesh->dim+j] = f[j+1][i]-f[0][i]; + for (unsigned int j=0; jdim; j++) out[i*mesh->dim+j] = f[j+1][i]-f[0][i]; } // Solve to obtain the gradient of each element - matrix_divs(&Mt, &frhs, &grad); + matrix_solvesmall(&Mt, &grad); return true; } @@ -4086,7 +4085,8 @@ bool integral_prepareinvjacobian(unsigned int dim, grade g, double **x, objectma if (g==dim) { objectmatrix smat = MORPHO_STATICMATRIX(s, dim, dim); - success=(matrix_inverse(&smat, invj)==LINALGERR_OK); + success=(matrix_copy(&smat, invj)==LINALGERR_OK && + matrix_inverse(invj)==LINALGERR_OK); } else if (g==1) { double s01norm = functional_vecdot(dim, s, s); if (s01norm>0) { @@ -4314,12 +4314,13 @@ void integral_evaluatecg(vm *v, value *out) { linearelasticity_calculategram(elref->iref->mref->vert, elref->mesh->dim, elref->nv, elref->vid, &gramref); linearelasticity_calculategram(elref->mesh->vert, elref->mesh->dim, elref->nv, elref->vid, &gramdef); - if (matrix_inverse(&gramref, &q)!=LINALGERR_OK) return; + if (matrix_copy(&gramref, &q)!=LINALGERR_OK) return; + if (matrix_inverse(&q)!=LINALGERR_OK) return; if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return; matrix_identity(cg); matrix_scale(cg, -0.5); - matrix_accumulate(cg, 0.5, &r); + matrix_axpy(0.5, &r, cg); vm_settlvar(v, cauchygreenhandle, MORPHO_OBJECT(cg)); *out = MORPHO_OBJECT(cg); diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 0c515d55..a069acd6 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -468,6 +468,10 @@ linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double return LINALGERR_OK; } +linalgError_t matrix_mul(objectmatrix *x, objectmatrix *y, objectmatrix *z) { + return matrix_mmul(1.0, x, y, 0.0, z); +} + /** Performs x <- alpha*x + beta */ linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta) { for (MatrixCount_t i=0; incols*x->nrows; i++) { diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index dbcbcdff..fd4300b2 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -247,12 +247,20 @@ void matrix_scale(objectmatrix *x, double scale); linalgError_t matrix_zero(objectmatrix *x); linalgError_t matrix_identity(objectmatrix *x); linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double beta, objectmatrix *z); +linalgError_t matrix_mul(objectmatrix *x, objectmatrix *y, objectmatrix *z); linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta); linalgError_t matrix_transpose(objectmatrix *x, objectmatrix *y); +double matrix_norm(objectmatrix *a, matrix_norm_t norm); +void matrix_sum(objectmatrix *a, double *sum); +linalgError_t matrix_trace(objectmatrix *a, double *out); + linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out); +linalgError_t matrix_solvesmall(objectmatrix *a, objectmatrix *b); +linalgError_t matrix_solvelarge(objectmatrix *a, objectmatrix *b); linalgError_t matrix_solve(objectmatrix *a, objectmatrix *b); +linalgError_t matrix_inverse(objectmatrix *a); linalgError_t matrix_svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt); From 42f520e9eb2be9675378cebcba135c3cb9a91b9a Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 08:27:42 -0500 Subject: [PATCH 110/156] matrix_setcolumnptr and matrix_addtocolumnptr for integration --- src/geometry/functional.c | 34 +++++++++++++++++----------------- src/linalg/matrix.c | 23 +++++++++++++++++++++++ src/linalg/matrix.h | 10 ++++++++++ 3 files changed, 50 insertions(+), 17 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 782d9de5..0565fc24 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -158,8 +158,8 @@ bool functional_symmetrysumforces(objectmesh *mesh, objectmatrix *frc) { matrix_getcolumnptr(frc, j, &fj)) { for (unsigned int k=0; kdim; k++) fsum[k]=fi[k]+fj[k]; - matrix_setcolumn(frc, i, fsum); - matrix_setcolumn(frc, j, fsum); + matrix_setcolumnptr(frc, i, fsum); + matrix_setcolumnptr(frc, j, fsum); } } } @@ -1730,8 +1730,8 @@ bool length_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *v norm=functional_vecnorm(mesh->dim, s0); if (normdim==2) { functional_veccross2d(x[0], x[1], cx); @@ -1857,12 +1857,12 @@ bool area_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid functional_veccross(s01, s0, s010); functional_veccross(s01, s1, s011); - matrix_addtocolumn(frc, vid[0], 0.5/norm*scale, s011); - matrix_addtocolumn(frc, vid[2], 0.5/norm*scale, s010); + matrix_addtocolumnptr(frc, vid[0], 0.5/norm*scale, s011); + matrix_addtocolumnptr(frc, vid[2], 0.5/norm*scale, s010); functional_vecadd(mesh->dim, s010, s011, s0); - matrix_addtocolumn(frc, vid[1], -0.5/norm*scale, s0); + matrix_addtocolumnptr(frc, vid[1], -0.5/norm*scale, s0); return true; } @@ -1917,13 +1917,13 @@ bool volumeenclosed_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int dot/=fabs(dot); - matrix_addtocolumn(frc, vid[2], dot/6.0, cx); + matrix_addtocolumnptr(frc, vid[2], dot/6.0, cx); functional_veccross(x[1], x[2], cx); - matrix_addtocolumn(frc, vid[0], dot/6.0, cx); + matrix_addtocolumnptr(frc, vid[0], dot/6.0, cx); functional_veccross(x[2], x[0], cx); - matrix_addtocolumn(frc, vid[1], dot/6.0, cx); + matrix_addtocolumnptr(frc, vid[1], dot/6.0, cx); return true; } @@ -1977,16 +1977,16 @@ bool volume_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *v uu=functional_vecdot(mesh->dim, s10, cx); uu=(uu>0 ? 1.0 : -1.0); - matrix_addtocolumn(frc, vid[1], uu/6.0*scale, cx); + matrix_addtocolumnptr(frc, vid[1], uu/6.0*scale, cx); functional_veccross(s31, s21, cx); - matrix_addtocolumn(frc, vid[0], uu/6.0*scale, cx); + matrix_addtocolumnptr(frc, vid[0], uu/6.0*scale, cx); functional_veccross(s30, s10, cx); - matrix_addtocolumn(frc, vid[2], uu/6.0*scale, cx); + matrix_addtocolumnptr(frc, vid[2], uu/6.0*scale, cx); functional_veccross(s10, s20, cx); - matrix_addtocolumn(frc, vid[3], uu/6.0*scale, cx); + matrix_addtocolumnptr(frc, vid[3], uu/6.0*scale, cx); return true; } @@ -2059,7 +2059,7 @@ bool scalarpotential_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int objectmatrix *vf=MORPHO_GETMATRIX(ret); if (vf->nrows*vf->ncols==frc->nrows) { - return matrix_addtocolumn(frc, id, 1.0, vf->elements); + return matrix_addtocolumnptr(frc, id, 1.0, vf->elements); } } } diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index a069acd6..0f78033c 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -416,6 +416,27 @@ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b return LINALGERR_OK; } +/** Copies the column vector b as a raw list of doubles into column col of matrix a */ +linalgError_t matrix_setcolumnptr(objectmatrix *a, MatrixIdx_t col, double *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + + cblas_dcopy((__LAPACK_int) a->nrows*a->nvals, b, 1, a->elements+a->nvals*col*a->nrows, 1); + return LINALGERR_OK; +} + +/** @brief Add a vector to a column in a matrix + * @param[in] m - the matrix + * @param[in] col - column number + * @param[in] alpha - scale + * @param[out] v - column entries (matrix->nrows in number) [should have m->nrows entries] + * @returns true on success */ +linalgError_t matrix_addtocolumnptr(objectmatrix *a, MatrixIdx_t col, double alpha, double *b) { + if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + + cblas_daxpy(a->nrows*a->nvals, alpha, b, 1, a->elements+a->nvals*col*a->nrows, 1); + return LINALGERR_OK; +} + /** Counts the number of dofs in a matrix */ MatrixCount_t matrix_countdof(objectmatrix *a) { return a->ncols*a->nrows*a->nvals; @@ -1510,6 +1531,8 @@ void matrix_initialize(void) { morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_defineerror(MATRIX_CONSTRUCTOR, ERROR_HALT, MATRIX_CONSTRUCTOR_MSG); + complexmatrix_initialize(); } diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index fd4300b2..bd401acd 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -227,6 +227,13 @@ IMPLEMENTATIONFN(Matrix_dimensions); #undef DECLARE_IMPLEMENTATIONFN +/* ------------------------------------------------------- + * Errors + * ------------------------------------------------------- */ + +#define MATRIX_CONSTRUCTOR "MtrxCns" +#define MATRIX_CONSTRUCTOR_MSG "Matrix() constructor should be called either with dimensions or an array, list, tuple or matrix initializer." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ @@ -270,6 +277,9 @@ linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); linalgError_t matrix_getcolumnptr(objectmatrix *matrix, MatrixIdx_t col, double **value); +linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b); +linalgError_t matrix_setcolumnptr(objectmatrix *a, MatrixIdx_t col, double *b); +linalgError_t matrix_addtocolumnptr(objectmatrix *a, MatrixIdx_t col, double alpha, double *b); void matrix_print(vm *v, objectmatrix *m); From 39af4d5eda6ad473e0427a6e708d173c534434a0 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 20:22:06 -0500 Subject: [PATCH 111/156] Fix header files and replace matrix_setcolumn with matrix_setcolumnptr --- src/geometry/mesh.c | 2 +- src/linalg/linalg.h | 4 ---- src/linalg/matrix.h | 2 ++ 3 files changed, 3 insertions(+), 5 deletions(-) diff --git a/src/geometry/mesh.c b/src/geometry/mesh.c index 150174df..22480e6e 100644 --- a/src/geometry/mesh.c +++ b/src/geometry/mesh.c @@ -147,7 +147,7 @@ bool mesh_getvertexcoordinatesaslist(objectmesh *mesh, elementid id, double **ou /** Gets vertex coordinates */ bool mesh_setvertexcoordinates(objectmesh *mesh, elementid id, double *x) {; - return matrix_setcolumn(mesh->vert, id, x); + return matrix_setcolumnptr(mesh->vert, id, x); } /** Gets vertex coordinates as a value list */ diff --git a/src/linalg/linalg.h b/src/linalg/linalg.h index 18dd197b..c7c47ae7 100644 --- a/src/linalg/linalg.h +++ b/src/linalg/linalg.h @@ -8,9 +8,6 @@ #ifndef linalg_h #define linalg_h -#include -#include - /* ------------------------------------------------------- * objectmatrixerror type * ------------------------------------------------------- */ @@ -90,7 +87,6 @@ void linalg_raiseerror(vm *v, linalgError_t err); #include "matrix.h" #include "complexmatrix.h" - /* ------------------------------------------------------- * Initialization and finalization * ------------------------------------------------------- */ diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index bd401acd..f0189b44 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -281,6 +281,8 @@ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b linalgError_t matrix_setcolumnptr(objectmatrix *a, MatrixIdx_t col, double *b); linalgError_t matrix_addtocolumnptr(objectmatrix *a, MatrixIdx_t col, double alpha, double *b); +MatrixCount_t matrix_countdof(objectmatrix *a); + void matrix_print(vm *v, objectmatrix *m); #endif /* MORPHO_INCLUDE_LINALG */ From 0ffa0bb39f3be21ca8106a627691d4328a93da6c Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 20:35:38 -0500 Subject: [PATCH 112/156] Remove circular dependency in includes --- src/core/core.h | 6 ++++++ src/datastructures/program.h | 2 +- src/linalg/linalg.h | 4 +++- 3 files changed, 10 insertions(+), 2 deletions(-) diff --git a/src/core/core.h b/src/core/core.h index 54e0726d..0a542ad2 100644 --- a/src/core/core.h +++ b/src/core/core.h @@ -10,7 +10,13 @@ #include #include +/** Forward declarations of key types */ +struct sprogram; +struct scompiler; + typedef struct svm vm; +typedef struct sprogram program; +typedef struct scompiler compiler; #include "error.h" #include "random.h" diff --git a/src/datastructures/program.h b/src/datastructures/program.h index 00a16644..0ee32b04 100644 --- a/src/datastructures/program.h +++ b/src/datastructures/program.h @@ -44,7 +44,7 @@ DECLARE_VARRAY(globalinfo, globalinfo) * ------------------------------------------------------- */ /** @brief Morpho code program and associated data */ -typedef struct { +typedef struct sprogram { varray_instruction code; /** Compiled instructions */ varray_debugannotation annotations; /** Information about how the code connects to the source */ objectfunction *global; /** Pseudofunction containing global data */ diff --git a/src/linalg/linalg.h b/src/linalg/linalg.h index c7c47ae7..bca26ed1 100644 --- a/src/linalg/linalg.h +++ b/src/linalg/linalg.h @@ -8,6 +8,8 @@ #ifndef linalg_h #define linalg_h +#include "morpho.h" + /* ------------------------------------------------------- * objectmatrixerror type * ------------------------------------------------------- */ @@ -93,4 +95,4 @@ void linalg_raiseerror(vm *v, linalgError_t err); void linalg_initialize(void); -#endif +#endif /* linalg_h */ From 1a9912a9841c76bd2c0ae65a1060493d8ec088d2 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 20:38:58 -0500 Subject: [PATCH 113/156] Fix undefined error message --- src/linalg/linalg.c | 1 + src/linalg/linalg.h | 3 +++ src/linalg/matrix.c | 2 +- 3 files changed, 5 insertions(+), 1 deletion(-) diff --git a/src/linalg/linalg.c b/src/linalg/linalg.c index d3e72d6b..97440203 100644 --- a/src/linalg/linalg.c +++ b/src/linalg/linalg.c @@ -43,5 +43,6 @@ void linalg_initialize(void) { morpho_defineerror(LINALG_INVLDARGS, ERROR_HALT, LINALG_INVLDARGS_MSG); morpho_defineerror(LINALG_NNNMRCL_ARG, ERROR_HALT, LINALG_NNNMRCL_ARG_MSG); morpho_defineerror(LINALG_NORMARGS, ERROR_HALT, LINALG_NORMARGS_MSG); + morpho_defineerror(LINALG_ARITHARGS, ERROR_HALT, LINALG_ARITHARGS_MSG); } diff --git a/src/linalg/linalg.h b/src/linalg/linalg.h index bca26ed1..c6d2a6f7 100644 --- a/src/linalg/linalg.h +++ b/src/linalg/linalg.h @@ -62,6 +62,9 @@ typedef enum { #define LINALG_NORMARGS "LnAlgMtrxNrmArgs" #define LINALG_NORMARGS_MSG "Method 'norm' requires a supported argument: 1 or inf." +#define LINALG_ARITHARGS "LnAlgInvldArg" +#define LINALG_ARITHARGS_MSG "Matrix arithmetic methods expect a matrix or number as their argument." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 0f78033c..6d0e5511 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1077,7 +1077,7 @@ value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); double alpha=1.0; - if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } + if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, LINALG_ARITHARGS); return MORPHO_NIL; } LINALG_ERRCHECKVM(matrix_axpy(alpha, b, a)); return MORPHO_NIL; From cff963e117708d86fefe02ee4b6d9fb334700e4a Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 20:50:48 -0500 Subject: [PATCH 114/156] Migrate some helper functions for sparse constructor functions --- src/classes/array.c | 4 +- src/linalg/sparse.c | 112 ++++++++++++++++++++++++++++++++++++-------- 2 files changed, 94 insertions(+), 22 deletions(-) diff --git a/src/classes/array.c b/src/classes/array.c index a1ef3c96..2459fcbd 100644 --- a/src/classes/array.c +++ b/src/classes/array.c @@ -192,8 +192,8 @@ errorid array_error(objectarrayerror err) { /** Converts an array error into an matrix error code for use in slices*/ errorid array_to_matrix_error(objectarrayerror err) { #ifdef MORPHO_INCLUDE_LINALG - switch (err) { - case ARRAY_OUTOFBOUNDS: return MATRIX_INDICESOUTSIDEBOUNDS; + switch (err) { + case ARRAY_OUTOFBOUNDS: return LINALG_INDICESOUTSIDEBOUNDS; case ARRAY_WRONGDIM: return MATRIX_INVLDNUMINDICES; case ARRAY_NONINTINDX: return MATRIX_INVLDINDICES; case ARRAY_ALLOC_FAILED: return ERROR_ALLOCATIONFAILED; diff --git a/src/linalg/sparse.c b/src/linalg/sparse.c index 320d80f3..d73e580c 100644 --- a/src/linalg/sparse.c +++ b/src/linalg/sparse.c @@ -687,6 +687,39 @@ bool sparse_checkupdatedimension(int check, int *dim) { return true; } +/** Recurses into an objectlist to find the dimensions of the array and all child arrays */ +static bool _getlistdimensions(objectlist *list, unsigned int dim[], unsigned int maxdim, unsigned int *ndim) { + unsigned int m=0; + + if (maxdim==0) return false; + + /* Store the length */ + if (list->val.count>dim[0]) dim[0]=list->val.count; + + for (unsigned int i=0; ival.count; i++) { + if (MORPHO_ISLIST(list->val.data[i]) && maxdim>0) { + _getlistdimensions(MORPHO_GETLIST(list->val.data[i]), dim+1, maxdim-1, &m); + } + } + *ndim=m+1; + + return true; +} + +/** Gets a matrix element from a (potentially nested) list. */ +static bool _getlistelement(objectlist *list, unsigned int ndim, unsigned int *indx, value *val) { + value out=MORPHO_NIL; + objectlist *l=list; + for (unsigned int i=0; ival.count) { + out=l->val.data[indx[i]]; + if (i0) icol+=ncols[j]; @@ -828,7 +861,7 @@ objectsparseerror sparse_catmatrix(objectlist *in, objectmatrix **out) { objectsparseerror err=sparse_docat(in, NULL, matrix_catcopyentry, &nrows, &ncols); if (err!=SPARSE_OK) goto sparse_catmatrix_error; - new = object_newmatrix(nrows, ncols, true); + new = matrix_new(nrows, ncols, true); err=sparse_docat(in, new, matrix_catcopyentry, NULL, NULL); if (err==SPARSE_OK) *out = new; @@ -844,11 +877,50 @@ objectsparseerror sparse_catmatrix(objectlist *in, objectmatrix **out) { * Construct sparse matrices * ******************************* */ +/** Recurses into an objectarray to find the dimensions of the array and all child arrays + * @param[in] array - to search + * @param[out] dim - array of dimensions to be filled out (must be zero'd before initial call) + * @param[in] maxdim - maximum number of dimensions + * @param[out] ndim - number of dimensions of the array */ +static bool _getarraydimensions(objectarray *array, unsigned int dim[], unsigned int maxdim, unsigned int *ndim) { + unsigned int n=0, m=0; + for (n=0; nndim; n++) { + int k=MORPHO_GETINTEGERVALUE(array->data[n]); + if (k>dim[n]) dim[n]=k; + } + + if (maxdimndim) return false; + + for (unsigned int i=array->ndim; indim+array->nelements; i++) { + if (MORPHO_ISARRAY(array->data[i])) { + if (!_getarraydimensions(MORPHO_GETARRAY(array->data[i]), dim+n, maxdim-n, &m)) return false; + } + } + *ndim=n+m; + + return true; +} + +/** Looks up an array element recursively if necessary */ +static value _getarrayelement(objectarray *array, unsigned int ndim, unsigned int *indx) { + unsigned int na=array->ndim; + value out; + + if (array_getelement(array, na, indx, &out)==ARRAY_OK) { + if (ndim==na) return out; + if (MORPHO_ISARRAY(out)) { + return _getarrayelement(MORPHO_GETARRAY(out), ndim-na, indx+na); + } + } + + return MORPHO_NIL; +} + /** Create a sparse array from an array */ objectsparse *object_sparsefromarray(objectarray *array) { unsigned int dim[2] = {0,0}, ndim; - if (!matrix_getarraydimensions(array, dim, 2, &ndim)) return NULL; + if (!_getarraydimensions(array, dim, 2, &ndim)) return NULL; objectsparse *new=object_newsparse(NULL, NULL); @@ -856,7 +928,7 @@ objectsparse *object_sparsefromarray(objectarray *array) { value v[3]={MORPHO_NIL, MORPHO_NIL, MORPHO_NIL}; for (unsigned int k=0; kdok, MORPHO_GETINTEGERVALUE(v[0]), MORPHO_GETINTEGERVALUE(v[1]), v[2]); @@ -875,7 +947,7 @@ objectsparseerror object_sparsefromlist(objectlist *list, objectsparse **out) { unsigned int dim[2] = {0,0}, ndim; objectsparseerror err=SPARSE_OK; - if (!matrix_getlistdimensions(list, dim, 2, &ndim)) return SPARSE_INVLDINIT; + if (!_getlistdimensions(list, dim, 2, &ndim)) return SPARSE_INVLDINIT; objectsparse *new=object_newsparse(NULL, NULL); @@ -889,7 +961,7 @@ objectsparseerror object_sparsefromlist(objectlist *list, objectsparse **out) { value v[3]={MORPHO_NIL, MORPHO_NIL, MORPHO_NIL}; for (unsigned int k=0; kdok, MORPHO_GETINTEGERVALUE(v[0]), MORPHO_GETINTEGERVALUE(v[1]), v[2]); @@ -920,11 +992,11 @@ objectsparseerror sparse_tomatrix(objectsparse *in, objectmatrix **out) { objectmatrix *new = NULL; if (sparse_checkformat(in, SPARSE_CCS, false, false)) { - new=object_newmatrix(in->ccs.nrows, in->ccs.ncols, true); + new=matrix_new(in->ccs.nrows, in->ccs.ncols, true); if (!new) return SPARSE_FAILED; if (sparseccs_copytomatrix(&in->ccs, new, 0, 0)) err=SPARSE_OK; } else if (sparse_checkformat(in, SPARSE_DOK, false, false)) { - new=object_newmatrix(in->dok.nrows, in->dok.ncols, true); + new=matrix_new(in->dok.nrows, in->dok.ncols, true); if (!new) return SPARSE_FAILED; if (sparsedok_copytomatrix(&in->dok, new, 0, 0)) err=SPARSE_OK; } @@ -1192,7 +1264,7 @@ size_t sparse_size(objectsparse *a) { void sparse_raiseerror(vm *v, objectsparseerror err) { switch(err) { case SPARSE_OK: break; - case SPARSE_INCMPTBLDIM: morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); break; + case SPARSE_INCMPTBLDIM: morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); break; case SPARSE_CONVFAILED: morpho_runtimeerror(v, SPARSE_CONVFAILEDERR); break; case SPARSE_FAILED: morpho_runtimeerror(v, SPARSE_OPFAILEDERR); break; case SPARSE_INVLDINIT: morpho_runtimeerror(v, SPARSE_INVLDARRAYINIT); break; @@ -1384,7 +1456,7 @@ value Sparse_mul(vm *v, int nargs, value *args) { if (sparse_checkformat(a, SPARSE_CCS, true, true)) { objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - objectmatrix *out=object_newmatrix(a->ccs.nrows, b->ncols, true); + objectmatrix *out=matrix_new(a->ccs.nrows, b->ncols, true); new = (objectsparse *) out; // Munge type to ensure binding/deallocation if (out) { @@ -1427,7 +1499,7 @@ value Sparse_mulr(vm *v, int nargs, value *args) { int ncols; sparse_getdimensions(b, NULL, &ncols); - objectmatrix *new=object_newmatrix(a->nrows, ncols, true); + objectmatrix *new=matrix_new(a->nrows, ncols, true); if (new) { err=sparse_muldxs(a, b, new); @@ -1460,7 +1532,7 @@ value Sparse_divr(vm *v, int nargs, value *args) { if (nargs==1 && MORPHO_ISMATRIX(MORPHO_GETARG(args, 0))) { objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - objectmatrix *new = object_newmatrix(b->nrows, b->ncols, false); + objectmatrix *new = matrix_new(b->nrows, b->ncols, false); if (new) { size_t asize=sparse_size(a); objectsparseerror err =sparse_div(a, b, new); @@ -1586,7 +1658,7 @@ value Sparse_getcolumn(vm *v, int nargs, value *args) { morpho_bindobjects(v, 1, &out); } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } else morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); return out; @@ -1642,12 +1714,12 @@ value Sparse_setrowindices(vm *v, int nargs, value *args) { entries[i]=MORPHO_GETINTEGERVALUE(entry); } else { morpho_runtimeerror(v, MATRIX_INVLDINDICES); return MORPHO_NIL; } } - + if (!sparseccs_setrowindices(&s->ccs, col, nentries, entries)) { - morpho_runtimeerror(v, MATRIX_INCOMPATIBLEMATRICES); + morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); } - - } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + + } else morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); } } From e5564595d78bf140bf6afb9ac7fcf6a75066d3a4 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:03:08 -0500 Subject: [PATCH 115/156] Fix error messages and unmangle Method implementation names --- src/classes/array.c | 8 +++-- src/classes/array.h | 6 ++++ src/linalg/matrix.c | 78 ++++++++++++++++++++++----------------------- src/linalg/matrix.h | 36 ++++++++++----------- src/linalg/sparse.c | 10 +++--- 5 files changed, 73 insertions(+), 65 deletions(-) diff --git a/src/classes/array.c b/src/classes/array.c index 2459fcbd..aefebc0f 100644 --- a/src/classes/array.c +++ b/src/classes/array.c @@ -192,10 +192,10 @@ errorid array_error(objectarrayerror err) { /** Converts an array error into an matrix error code for use in slices*/ errorid array_to_matrix_error(objectarrayerror err) { #ifdef MORPHO_INCLUDE_LINALG - switch (err) { + switch (err) { case ARRAY_OUTOFBOUNDS: return LINALG_INDICESOUTSIDEBOUNDS; - case ARRAY_WRONGDIM: return MATRIX_INVLDNUMINDICES; - case ARRAY_NONINTINDX: return MATRIX_INVLDINDICES; + case ARRAY_WRONGDIM: return ARRAY_DIMENSION; + case ARRAY_NONINTINDX: return ARRAY_INVLDINDICES; case ARRAY_ALLOC_FAILED: return ERROR_ALLOCATIONFAILED; case ARRAY_OK: UNREACHABLE("array_to_matrix_error called incorrectly."); } @@ -630,4 +630,6 @@ void array_initialize(void) { morpho_defineerror(ARRAY_ARGS, ERROR_HALT, ARRAY_ARGS_MSG); morpho_defineerror(ARRAY_INIT, ERROR_HALT, ARRAY_INIT_MSG); morpho_defineerror(ARRAY_CMPT, ERROR_HALT, ARRAY_CMPT_MSG); + morpho_defineerror(ARRAY_DIMENSION, ERROR_HALT, ARRAY_DIMENSION_MSG); + morpho_defineerror(ARRAY_INVLDINDICES, ERROR_HALT, ARRAY_INVLDINDICES_MSG); } diff --git a/src/classes/array.h b/src/classes/array.h index e0b7f97b..17eba9fe 100644 --- a/src/classes/array.h +++ b/src/classes/array.h @@ -65,6 +65,12 @@ objectarray *object_arrayfromvalueindices(unsigned int ndim, value *dim); #define ARRAY_CMPT "ArrayCmpt" #define ARRAY_CMPT_MSG "Array initializer is not compatible with the requested dimensions." +#define ARRAY_DIMENSION "ArrayDim" +#define ARRAY_DIMENSION_MSG "Wrong dimensions for Array." + +#define ARRAY_INVLDINDICES "ArrayIndx" +#define ARRAY_INVLDINDICES_MSG "Array requires integers as indices." + /* ------------------------------------------------------- * Array interface * ------------------------------------------------------- */ diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 6d0e5511..34790696 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -831,7 +831,7 @@ value Matrix_clone(vm *v, int nargs, value *args) { * index() * --------- */ -value Matrix_index_int_int(vm *v, int nargs, value *args) { +value Matrix_index__int_int(vm *v, int nargs, value *args) { objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -883,7 +883,7 @@ static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx return LINALGERR_OK; } -value Matrix_index_x_x(vm *v, int nargs, value *args) { +value Matrix_index__x_x(vm *v, int nargs, value *args) { objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)), *new=NULL; value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); value out=MORPHO_NIL; @@ -911,20 +911,20 @@ static void _setindex(vm *v, objectmatrix *m, MatrixIdx_t i, MatrixIdx_t j, valu if (elptr) LINALG_ERRCHECKVM(matrix_getinterface(m)->setelfn(v, in, elptr)); } -value Matrix_setindex_int_x(vm *v, int nargs, value *args) { +value Matrix_setindex__int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); return MORPHO_NIL; } -value Matrix_setindex_int_int_x(vm *v, int nargs, value *args) { +value Matrix_setindex__int_int_x(vm *v, int nargs, value *args) { MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); return MORPHO_NIL; } -value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { +value Matrix_setindex__x_x_matrix(vm *v, int nargs, value *args) { objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); objectmatrix *msrc = MORPHO_GETMATRIX(MORPHO_GETARG(args, 2)); value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); @@ -941,7 +941,7 @@ value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { * column * --------- */ -value Matrix_getcolumn_int(vm *v, int nargs, value *args) { +value Matrix_getcolumn__int(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); value out=MORPHO_NIL; @@ -955,7 +955,7 @@ value Matrix_getcolumn_int(vm *v, int nargs, value *args) { return out; } -value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { +value Matrix_setcolumn__int_matrix(vm *v, int nargs, value *args) { LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETMATRIX(MORPHO_SELF(args)), MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)))); @@ -1002,12 +1002,12 @@ value Matrix_add__matrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,1.0); } -value Matrix_add_nil(vm *v, int nargs, value *args) { +value Matrix_add__nil(vm *v, int nargs, value *args) { return MORPHO_SELF(args); } -value Matrix_add_x(vm *v, int nargs, value *args) { - if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr +value Matrix_add__x(vm *v, int nargs, value *args) { + if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr return _xpa(v,nargs,args,1.0,1.0); } @@ -1015,16 +1015,16 @@ value Matrix_sub__matrix(vm *v, int nargs, value *args) { return _axpy(v,nargs,args,-1.0); } -value Matrix_sub_x(vm *v, int nargs, value *args) { +value Matrix_sub__x(vm *v, int nargs, value *args) { if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr return _xpa(v,nargs,args,1.0,-1.0); } -value Matrix_subr_x(vm *v, int nargs, value *args) { +value Matrix_subr__x(vm *v, int nargs, value *args) { return _xpa(v,nargs,args,-1.0,1.0); } -value Matrix_mul_float(vm *v, int nargs, value *args) { +value Matrix_mul__float(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double scale; @@ -1048,7 +1048,7 @@ value Matrix_mul__matrix(vm *v, int nargs, value *args) { return out; } -value Matrix_div_float(vm *v, int nargs, value *args) { +value Matrix_div__float(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double scale; @@ -1072,7 +1072,7 @@ value Matrix_div__matrix(vm *v, int nargs, value *args) { } /** Accumulate in place */ -value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { +value Matrix_acc__x_x_matrix(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); @@ -1088,7 +1088,7 @@ value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { * ---------------- */ /** Matrix norm */ -value Matrix_norm_x(vm *v, int nargs, value *args) { +value Matrix_norm__x(vm *v, int nargs, value *args) { objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); double n; @@ -1412,7 +1412,7 @@ static value _roll(vm *v, objectmatrix *a, int roll, int axis) { } /** Roll a matrix */ -value Matrix_roll_int_int(vm *v, int nargs, value *args) { +value Matrix_roll__int_int(vm *v, int nargs, value *args) { objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), axis = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); @@ -1420,7 +1420,7 @@ value Matrix_roll_int_int(vm *v, int nargs, value *args) { } /** Roll a matrix by row */ -value Matrix_roll_int(vm *v, int nargs, value *args) { +value Matrix_roll__int(vm *v, int nargs, value *args) { objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); return _roll(v, a, roll, 0); @@ -1465,30 +1465,30 @@ MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(Matrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "Matrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index_int_int, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index__int_int, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index__x_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex__x_x_matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn__int_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Matrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Matrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (_)", Matrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (Matrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "Matrix (_)", Matrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (Matrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, Matrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (_)", Matrix_div__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, Matrix)", Matrix_acc__x_x_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "Matrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm__x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", Matrix_sum, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Float ()", Matrix_trace, MORPHO_FN_PUREFN), @@ -1500,8 +1500,8 @@ MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensyste MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int)", Matrix_roll__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int,Int)", Matrix_roll__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index f0189b44..2644e327 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -189,28 +189,28 @@ IMPLEMENTATIONFN(Matrix_format); IMPLEMENTATIONFN(Matrix_assign); IMPLEMENTATIONFN(Matrix_clone); -IMPLEMENTATIONFN(Matrix_index_int); -IMPLEMENTATIONFN(Matrix_index_int_int); -IMPLEMENTATIONFN(Matrix_index_x_x); -IMPLEMENTATIONFN(Matrix_setindex_int_x); -IMPLEMENTATIONFN(Matrix_setindex_int_int_x); -IMPLEMENTATIONFN(Matrix_setindex_x_x__matrix); +IMPLEMENTATIONFN(Matrix_index__int); +IMPLEMENTATIONFN(Matrix_index__int_int); +IMPLEMENTATIONFN(Matrix_index__x_x); +IMPLEMENTATIONFN(Matrix_setindex__int_x); +IMPLEMENTATIONFN(Matrix_setindex__int_int_x); +IMPLEMENTATIONFN(Matrix_setindex__x_x_matrix); -IMPLEMENTATIONFN(Matrix_getcolumn_int); -IMPLEMENTATIONFN(Matrix_setcolumn_int__matrix); +IMPLEMENTATIONFN(Matrix_getcolumn__int); +IMPLEMENTATIONFN(Matrix_setcolumn__int__matrix); IMPLEMENTATIONFN(Matrix_add__matrix); -IMPLEMENTATIONFN(Matrix_add_nil); -IMPLEMENTATIONFN(Matrix_add_x); +IMPLEMENTATIONFN(Matrix_add__nil); +IMPLEMENTATIONFN(Matrix_add__x); IMPLEMENTATIONFN(Matrix_sub__matrix); -IMPLEMENTATIONFN(Matrix_sub_x); -IMPLEMENTATIONFN(Matrix_subr_x); -IMPLEMENTATIONFN(Matrix_mul_float); -IMPLEMENTATIONFN(Matrix_div_float); +IMPLEMENTATIONFN(Matrix_sub__x); +IMPLEMENTATIONFN(Matrix_subr__x); +IMPLEMENTATIONFN(Matrix_mul__float); +IMPLEMENTATIONFN(Matrix_div__float); IMPLEMENTATIONFN(Matrix_div__matrix); -IMPLEMENTATIONFN(Matrix_acc_x_x__matrix); +IMPLEMENTATIONFN(Matrix_acc__x_x_matrix); -IMPLEMENTATIONFN(Matrix_norm_x); +IMPLEMENTATIONFN(Matrix_norm__x); IMPLEMENTATIONFN(Matrix_norm); IMPLEMENTATIONFN(Matrix_sum); IMPLEMENTATIONFN(Matrix_transpose); @@ -219,8 +219,8 @@ IMPLEMENTATIONFN(Matrix_eigensystem); IMPLEMENTATIONFN(Matrix_svd); IMPLEMENTATIONFN(Matrix_qr); IMPLEMENTATIONFN(Matrix_reshape); -IMPLEMENTATIONFN(Matrix_roll_int); -IMPLEMENTATIONFN(Matrix_roll_int_int); +IMPLEMENTATIONFN(Matrix_roll__int); +IMPLEMENTATIONFN(Matrix_roll__int_int); IMPLEMENTATIONFN(Matrix_enumerate); IMPLEMENTATIONFN(Matrix_count); IMPLEMENTATIONFN(Matrix_dimensions); diff --git a/src/linalg/sparse.c b/src/linalg/sparse.c index d73e580c..0157363e 100644 --- a/src/linalg/sparse.c +++ b/src/linalg/sparse.c @@ -1319,7 +1319,7 @@ value Sparse_getindex(vm *v, int nargs, value *args) { if (array_valuelisttoindices(nargs, args+1, indx)) { sparse_getelement(s, indx[0], indx[1], &out); - } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); return out; } @@ -1338,7 +1338,7 @@ value Sparse_setindex(vm *v, int nargs, value *args) { if (osize!=nsize) { morpho_resizeobject(v, (object *) s, osize, nsize); } - } else morpho_runtimeerror(v, MATRIX_INVLDINDICES); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } @@ -1659,7 +1659,7 @@ value Sparse_getcolumn(vm *v, int nargs, value *args) { } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); } else morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); - } else morpho_runtimeerror(v, MATRIX_SETCOLARGS); + } else morpho_runtimeerror(v, LINALG_INVLDARGS); return out; } @@ -1684,7 +1684,7 @@ value Sparse_rowindices(vm *v, int nargs, value *args) { morpho_bindobjects(v, 1, &out); } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); } - } else morpho_runtimeerror(v, MATRIX_INDICESOUTSIDEBOUNDS); + } else morpho_runtimeerror(v, LINALG_INDICESOUTSIDEBOUNDS); } } @@ -1712,7 +1712,7 @@ value Sparse_setrowindices(vm *v, int nargs, value *args) { if (list_getelement(list, i, &entry) && MORPHO_ISINTEGER(entry)) { entries[i]=MORPHO_GETINTEGERVALUE(entry); - } else { morpho_runtimeerror(v, MATRIX_INVLDINDICES); return MORPHO_NIL; } + } else { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } } if (!sparseccs_setrowindices(&s->ccs, col, nentries, entries)) { From b3d0b799943cff1be718df8afa4bf52f93a8ec99 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:05:28 -0500 Subject: [PATCH 116/156] Unmangle function names --- src/linalg/complexmatrix.c | 42 +++++++++++++++++++------------------- src/linalg/matrix.h | 2 +- 2 files changed, 22 insertions(+), 22 deletions(-) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index 6ed3f41a..84ecb4fb 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -564,40 +564,40 @@ MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index_int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index_x_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index__int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index__x_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex__int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex__x_x_matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn__int_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub__x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr__x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul__float, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div__float, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc__x_x_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm__x, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", Matrix_sum, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), @@ -613,8 +613,8 @@ MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensyste MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int)", Matrix_roll__int, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", Matrix_roll__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 2644e327..510b610c 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -197,7 +197,7 @@ IMPLEMENTATIONFN(Matrix_setindex__int_int_x); IMPLEMENTATIONFN(Matrix_setindex__x_x_matrix); IMPLEMENTATIONFN(Matrix_getcolumn__int); -IMPLEMENTATIONFN(Matrix_setcolumn__int__matrix); +IMPLEMENTATIONFN(Matrix_setcolumn__int_matrix); IMPLEMENTATIONFN(Matrix_add__matrix); IMPLEMENTATIONFN(Matrix_add__nil); From 0edffda9f98d36ad2f0b3ae4ef82fcd41b831441 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:16:18 -0500 Subject: [PATCH 117/156] matrix_copyat --- src/linalg/matrix.c | 15 +++++++++++++++ src/linalg/matrix.h | 1 + 2 files changed, 16 insertions(+) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 34790696..a67cbcdc 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -462,6 +462,21 @@ linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y) { return LINALGERR_OK; } +/** Copies one matrix into another at an arbitrary point */ +linalgError_t matrix_copyat(objectmatrix *a, objectmatrix *out, int row0, int col0) { + if (!(col0+a->ncols<=out->ncols && row0+a->nrows<=out->nrows)) return LINALGERR_INCOMPATIBLE_DIM; + + for (int j=0; jncols; j++) { + for (int i=0; inrows; i++) { + double *src, *dest; + LINALG_ERRCHECKRETURN(matrix_getelementptr(a, i, j, &src)); + LINALG_ERRCHECKRETURN(matrix_getelementptr(out, row0+i, col0+j, &dest)); + memcpy(dest, src, sizeof(double)*a->nvals); + } + } + return LINALGERR_OK; +} + /** Scales a matrix x <- scale * x >*/ void matrix_scale(objectmatrix *x, double scale) { cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 510b610c..65ebc1b0 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -250,6 +250,7 @@ MatrixCount_t matrix_countdof(objectmatrix *a); linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y); linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y); +linalgError_t matrix_copyat(objectmatrix *a, objectmatrix *out, int row0, int col0); void matrix_scale(objectmatrix *x, double scale); linalgError_t matrix_zero(objectmatrix *x); linalgError_t matrix_identity(objectmatrix *x); From e1b76fa4f696addab719cb2444ceb00ee4faa435 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:21:13 -0500 Subject: [PATCH 118/156] Fix duplicate error --- src/classes/array.c | 2 +- src/classes/array.h | 2 +- src/core/vm.c | 1 - src/datastructures/error.h | 3 --- 4 files changed, 2 insertions(+), 6 deletions(-) diff --git a/src/classes/array.c b/src/classes/array.c index aefebc0f..da098e77 100644 --- a/src/classes/array.c +++ b/src/classes/array.c @@ -180,7 +180,7 @@ void array_print(vm *v, objectarray *a) { errorid array_error(objectarrayerror err) { switch (err) { case ARRAY_OUTOFBOUNDS: return VM_OUTOFBOUNDS; - case ARRAY_WRONGDIM: return VM_ARRAYWRONGDIM; + case ARRAY_WRONGDIM: return ARRAY_DIMENSION; case ARRAY_NONINTINDX: return VM_NONNUMINDX; case ARRAY_ALLOC_FAILED: return ERROR_ALLOCATIONFAILED; case ARRAY_OK: UNREACHABLE("array_error called incorrectly."); diff --git a/src/classes/array.h b/src/classes/array.h index 17eba9fe..2f5fa950 100644 --- a/src/classes/array.h +++ b/src/classes/array.h @@ -66,7 +66,7 @@ objectarray *object_arrayfromvalueindices(unsigned int ndim, value *dim); #define ARRAY_CMPT_MSG "Array initializer is not compatible with the requested dimensions." #define ARRAY_DIMENSION "ArrayDim" -#define ARRAY_DIMENSION_MSG "Wrong dimensions for Array." +#define ARRAY_DIMENSION_MSG "Incorrect number of dimensions for Array." #define ARRAY_INVLDINDICES "ArrayIndx" #define ARRAY_INVLDINDICES_MSG "Array requires integers as indices." diff --git a/src/core/vm.c b/src/core/vm.c index d15d89c6..1269a971 100644 --- a/src/core/vm.c +++ b/src/core/vm.c @@ -2205,7 +2205,6 @@ void morpho_initialize(void) { morpho_defineerror(VM_NOTINDEXABLE, ERROR_HALT, VM_NOTINDEXABLE_MSG); morpho_defineerror(VM_OUTOFBOUNDS, ERROR_HALT, VM_OUTOFBOUNDS_MSG); morpho_defineerror(VM_NONNUMINDX, ERROR_HALT, VM_NONNUMINDX_MSG); - morpho_defineerror(VM_ARRAYWRONGDIM, ERROR_HALT, VM_ARRAYWRONGDIM_MSG); morpho_defineerror(VM_DVZR, ERROR_HALT, VM_DVZR_MSG); morpho_defineerror(VM_GETINDEXARGS, ERROR_HALT, VM_GETINDEXARGS_MSG); morpho_defineerror(VM_MLTPLDSPTCHFLD, ERROR_HALT, VM_MLTPLDSPTCHFLD_MSG); diff --git a/src/datastructures/error.h b/src/datastructures/error.h index 97f0e655..05274a9d 100644 --- a/src/datastructures/error.h +++ b/src/datastructures/error.h @@ -182,9 +182,6 @@ void morpho_unreachable(const char *explanation); #define VM_NONNUMINDX "NonNmIndx" #define VM_NONNUMINDX_MSG "Non-numerical array index." -#define VM_ARRAYWRONGDIM "ArrayDim" -#define VM_ARRAYWRONGDIM_MSG "Incorrect number of dimensions for array." - #define VM_DBGQUIT "DbgQuit" #define VM_DBGQUIT_MSG "Program terminated by user in debugger." From 2c491f9bcd48e353a1c836133884bc2b8b480f09 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:29:32 -0500 Subject: [PATCH 119/156] Fix uses of setcolumn in mesh.c --- src/geometry/mesh.c | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/geometry/mesh.c b/src/geometry/mesh.c index 22480e6e..98a075a8 100644 --- a/src/geometry/mesh.c +++ b/src/geometry/mesh.c @@ -1123,10 +1123,10 @@ value Mesh_vertexposition(vm *v, int nargs, value *args) { unsigned int id=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); double *vals; - if (matrix_getcolumnptr(m->vert, id, &vals)) { + if (matrix_getcolumnptr(m->vert, id, &vals)==LINALGERR_OK) { objectmatrix *new=matrix_new(m->dim, 1, true); if (new) { - matrix_setcolumn(new, 0, vals); + matrix_setcolumnptr(new, 0, vals); out=MORPHO_OBJECT(new); morpho_bindobjects(v, 1, &out); } @@ -1145,7 +1145,7 @@ value Mesh_setvertexposition(vm *v, int nargs, value *args) { unsigned int id=MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); objectmatrix *mat = MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); - if (!matrix_setcolumn(m->vert, id, mat->elements)) morpho_runtimeerror(v, MESH_INVLDID); + if (matrix_setcolumnptr(m->vert, id, mat->elements)!=LINALGERR_OK) morpho_runtimeerror(v, MESH_INVLDID); } else morpho_runtimeerror(v, MESH_STVRTPSNARGS); return MORPHO_NIL; From 3fdb421dc60f6b5ca5543b17f9cce5dd3f7db4e4 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 21:52:44 -0500 Subject: [PATCH 120/156] Fixes for test suite --- src/linalg/matrix.c | 1 + test/matrix/Lnorm.morpho | 4 ---- test/matrix/assign.morpho | 2 +- test/matrix/dimensions.morpho | 4 ++-- test/matrix/eigensystem.morpho | 5 +++-- test/matrix/incompatible_add.morpho | 2 +- test/matrix/incompatible_mul.morpho | 2 +- test/matrix/incompatible_sub.morpho | 2 +- test/matrix/inverse.morpho | 2 +- test/matrix/linearsolve.morpho | 2 +- test/matrix/nonnum_indices.morpho | 2 +- test/matrix/reshape.morpho | 2 +- test/matrix/trace.morpho | 2 +- test/mesh/out.mesh | 8 ++++---- 14 files changed, 19 insertions(+), 21 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index a67cbcdc..c796c37c 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -805,6 +805,7 @@ value matrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value Matrix_print(vm *v, int nargs, value *args) { + if (!MORPHO_ISMATRIX(MORPHO_SELF(args))) return Object_print(v, nargs, args); objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); matrix_print(v, m); return MORPHO_NIL; diff --git a/test/matrix/Lnorm.morpho b/test/matrix/Lnorm.morpho index e3fb763b..ac6e7094 100644 --- a/test/matrix/Lnorm.morpho +++ b/test/matrix/Lnorm.morpho @@ -5,9 +5,5 @@ var a = Matrix([1,2,3]) print a.norm(1) // expect: 6 -print abs(a.norm(2) - 3.74166) < 1e-4 // expect: true - -print abs(a.norm(3) - 3.30193) < 1e-4 // expect: true - print a.norm(Inf) // expect: 3 diff --git a/test/matrix/assign.morpho b/test/matrix/assign.morpho index 68aa43f9..c18d55f5 100644 --- a/test/matrix/assign.morpho +++ b/test/matrix/assign.morpho @@ -14,4 +14,4 @@ print b var c = Matrix(1,2) b.assign(c) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/dimensions.morpho b/test/matrix/dimensions.morpho index 2ef71212..2fe92517 100644 --- a/test/matrix/dimensions.morpho +++ b/test/matrix/dimensions.morpho @@ -4,7 +4,7 @@ var a = Matrix([[0.8, -0.4], [0.4, 0.8]]) var v = Matrix([0.2, 0.3]) print a.dimensions() -// expect: [ 2, 2 ] +// expect: (2, 2) print v.dimensions() -// expect: [ 2, 1 ] +// expect: (2, 1) diff --git a/test/matrix/eigensystem.morpho b/test/matrix/eigensystem.morpho index 17e1e55b..351eece3 100644 --- a/test/matrix/eigensystem.morpho +++ b/test/matrix/eigensystem.morpho @@ -4,5 +4,6 @@ var a = Matrix([[ -0.083929, 0.102945, 0.213477 ], [ 0.102945, -0.108697, 0.189335 ], [ 0.213477, 0.189335, 0.192626 ]]) -print a.eigensystem() -// expect: [ , ] \ No newline at end of file +var b = a.eigensystem() +print b[0].clss() // expect: @Tuple +print b[1].clss() // expect: @Matrix diff --git a/test/matrix/incompatible_add.morpho b/test/matrix/incompatible_add.morpho index 0045a01e..650250b3 100644 --- a/test/matrix/incompatible_add.morpho +++ b/test/matrix/incompatible_add.morpho @@ -4,4 +4,4 @@ var a = Matrix([[1, 2, 1], [3, 4, 1]]) var b = Matrix([[0, 1], [1, 0]]) print a+b -// expect Error: 'MtrxIncmptbl' +// expect Error: 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/incompatible_mul.morpho b/test/matrix/incompatible_mul.morpho index 769698df..dc681121 100644 --- a/test/matrix/incompatible_mul.morpho +++ b/test/matrix/incompatible_mul.morpho @@ -4,4 +4,4 @@ var a = Matrix([[1, 2, 1], [3, 4, 1]]) var b = Matrix([[0, 1], [1, 0]]) print a*b -// expect Error: 'MtrxIncmptbl' +// expect Error: 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/incompatible_sub.morpho b/test/matrix/incompatible_sub.morpho index d056a961..751af5d6 100644 --- a/test/matrix/incompatible_sub.morpho +++ b/test/matrix/incompatible_sub.morpho @@ -4,4 +4,4 @@ var a = Matrix([[1, 2, 1], [3, 4, 1]]) var b = Matrix([[0, 1], [1, 0]]) print a*b -// expect Error: 'MtrxIncmptbl' +// expect Error: 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/inverse.morpho b/test/matrix/inverse.morpho index 628acad3..de8879e1 100644 --- a/test/matrix/inverse.morpho +++ b/test/matrix/inverse.morpho @@ -15,4 +15,4 @@ print ((mi[1,1] - a/det)<1e-8) // expect: true var m = Matrix([[1,0,0],[0,1,0],[0,0,0]]) -print m.inverse() // expect error 'MtrxSnglr' +print m.inverse() // expect error 'LnAlgMtrxSnglr' diff --git a/test/matrix/linearsolve.morpho b/test/matrix/linearsolve.morpho index f22e45d0..4f27656c 100644 --- a/test/matrix/linearsolve.morpho +++ b/test/matrix/linearsolve.morpho @@ -21,4 +21,4 @@ print a var b = Matrix([[3, 4], [6, 8]]) print v/b -// expect error 'MtrxSnglr' +// expect error 'LnAlgMtrxSnglr' diff --git a/test/matrix/nonnum_indices.morpho b/test/matrix/nonnum_indices.morpho index 4ef54278..7f1b7d10 100644 --- a/test/matrix/nonnum_indices.morpho +++ b/test/matrix/nonnum_indices.morpho @@ -3,4 +3,4 @@ var a = Matrix([[1,2], [3,4], [5,6]]) print a["Hello", "Squirrel"] -// expect error: 'MtrxInvldIndx' +// expect error: 'LnAlgMtrxNnNmrclArg' diff --git a/test/matrix/reshape.morpho b/test/matrix/reshape.morpho index 12adcf5e..e3470ce7 100644 --- a/test/matrix/reshape.morpho +++ b/test/matrix/reshape.morpho @@ -31,4 +31,4 @@ print a // expect: [ 3 6 ] a.reshape(3,3) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/trace.morpho b/test/matrix/trace.morpho index cca52b46..48165412 100644 --- a/test/matrix/trace.morpho +++ b/test/matrix/trace.morpho @@ -7,4 +7,4 @@ print a.trace() var b = Matrix([[1, 2]]) print b.trace() -// expect error 'MtrxNtSq' +// expect error 'LnAlgMtrxNtSq' diff --git a/test/mesh/out.mesh b/test/mesh/out.mesh index ccbfb48f..40cfae01 100644 --- a/test/mesh/out.mesh +++ b/test/mesh/out.mesh @@ -1,9 +1,9 @@ vertices -1 0 0 0 -2 1 0 0 -3 0 1 0 -4 1 1 0 +1 +2 +3 +4 faces From cec3db29a50d626503dda9d658b6ca4addb6a22e Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:03:03 -0500 Subject: [PATCH 121/156] Fix error labels --- test/matrix/get_column.morpho | 2 +- test/sparse/set_row_indices.morpho | 2 +- test/types/multiple_dispatch/namespace_for_new.morpho | 3 +-- 3 files changed, 3 insertions(+), 4 deletions(-) diff --git a/test/matrix/get_column.morpho b/test/matrix/get_column.morpho index 94ba0314..d8d66621 100644 --- a/test/matrix/get_column.morpho +++ b/test/matrix/get_column.morpho @@ -17,4 +17,4 @@ print a.column(2) // expect: [ 12 ] print a.column(10) -// expect Error 'MtrxBnds' +// expect Error 'LnAlgMtrxIndxBnds' diff --git a/test/sparse/set_row_indices.morpho b/test/sparse/set_row_indices.morpho index e26e15b1..6284a3af 100644 --- a/test/sparse/set_row_indices.morpho +++ b/test/sparse/set_row_indices.morpho @@ -20,4 +20,4 @@ print a // expect: [ 1 -1 0 0 ] a.setrowindices(3, [1,1]) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/types/multiple_dispatch/namespace_for_new.morpho b/test/types/multiple_dispatch/namespace_for_new.morpho index 672f6e36..f32fe3c4 100644 --- a/test/types/multiple_dispatch/namespace_for_new.morpho +++ b/test/types/multiple_dispatch/namespace_for_new.morpho @@ -6,8 +6,7 @@ import "namespace.xmorpho" for f fn f(Matrix a) { print a.dimensions() - } f(Matrix(2,2)) -// expect: [ 2, 2 ] +// expect: (2, 2) From 5455866b4f36f01ef617f7eae2d6a4266e01b9e3 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:15:49 -0500 Subject: [PATCH 122/156] Delete unused errors --- src/classes/array.c | 2 +- src/classes/clss.c | 1 - src/classes/clss.h | 3 --- src/core/compile.c | 1 - src/core/compile.h | 3 --- src/core/vm.c | 1 - src/datastructures/error.h | 3 --- src/support/parse.c | 2 +- 8 files changed, 2 insertions(+), 14 deletions(-) diff --git a/src/classes/array.c b/src/classes/array.c index da098e77..832b7ad8 100644 --- a/src/classes/array.c +++ b/src/classes/array.c @@ -457,7 +457,7 @@ value array_constructor(vm *v, int nargs, value *args) { new = array_constructfromlist(ndim, dim, MORPHO_GETLIST(initializer)); if (!new) morpho_runtimeerror(v, ARRAY_CMPT); } else { - morpho_runtimeerror(v, ARRAY_ARGS); + morpho_runtimeerror(v, ARRAY_INIT); } // Bind the new array to the VM diff --git a/src/classes/clss.c b/src/classes/clss.c index 5665617c..1eeea843 100644 --- a/src/classes/clss.c +++ b/src/classes/clss.c @@ -196,5 +196,4 @@ void class_initialize(void) { // No constructor function; classes are generated by the compiler // Class error messages - morpho_defineerror(CLASS_INVK, ERROR_HALT, CLASS_INVK_MSG); } diff --git a/src/classes/clss.h b/src/classes/clss.h index 6b7b1a26..2d61f271 100644 --- a/src/classes/clss.h +++ b/src/classes/clss.h @@ -46,9 +46,6 @@ typedef struct sobjectclass { * Class error messages * ------------------------------------------------------- */ -#define CLASS_INVK "ClssInvk" -#define CLASS_INVK_MSG "Cannot invoke method '%s' on a class." - /* ------------------------------------------------------- * Class interface * ------------------------------------------------------- */ diff --git a/src/core/compile.c b/src/core/compile.c index 3c5ef456..e4b0cbd0 100644 --- a/src/core/compile.c +++ b/src/core/compile.c @@ -4990,7 +4990,6 @@ void compile_initialize(void) { morpho_defineerror(COMPILE_CLASSINHERITSELF, ERROR_COMPILE, COMPILE_CLASSINHERITSELF_MSG); morpho_defineerror(COMPILE_TOOMANYARGS, ERROR_COMPILE, COMPILE_TOOMANYARGS_MSG); morpho_defineerror(COMPILE_TOOMANYPARAMS, ERROR_COMPILE, COMPILE_TOOMANYPARAMS_MSG); - morpho_defineerror(COMPILE_ISOLATEDSUPER, ERROR_COMPILE, COMPILE_ISOLATEDSUPER_MSG); morpho_defineerror(COMPILE_VARALREADYDECLARED, ERROR_COMPILE, COMPILE_VARALREADYDECLARED_MSG); morpho_defineerror(COMPILE_FILENOTFOUND, ERROR_COMPILE, COMPILE_FILENOTFOUND_MSG); morpho_defineerror(COMPILE_MODULENOTFOUND, ERROR_COMPILE, COMPILE_MODULENOTFOUND_MSG); diff --git a/src/core/compile.h b/src/core/compile.h index a42781b8..ad945ddb 100644 --- a/src/core/compile.h +++ b/src/core/compile.h @@ -60,9 +60,6 @@ #define COMPILE_TOOMANYPARAMS "TooMnyPrm" #define COMPILE_TOOMANYPARAMS_MSG "Too many parameters." -#define COMPILE_ISOLATEDSUPER "IsoSpr" -#define COMPILE_ISOLATEDSUPER_MSG "Expect '.' after 'super'." - #define COMPILE_VARALREADYDECLARED "VblDcl" #define COMPILE_VARALREADYDECLARED_MSG "Variable with this name already declared in this scope." diff --git a/src/core/vm.c b/src/core/vm.c index 1269a971..508e9826 100644 --- a/src/core/vm.c +++ b/src/core/vm.c @@ -2183,7 +2183,6 @@ void morpho_initialize(void) { #endif morpho_defineerror(ERROR_ALLOCATIONFAILED, ERROR_EXIT, ERROR_ALLOCATIONFAILED_MSG); - morpho_defineerror(ERROR_INTERNALERROR, ERROR_EXIT, ERROR_INTERNALERROR_MSG); morpho_defineerror(ERROR_ERROR, ERROR_HALT, ERROR_ERROR_MSG); morpho_defineerror(VM_STCKOVFLW, ERROR_HALT, VM_STCKOVFLW_MSG); diff --git a/src/datastructures/error.h b/src/datastructures/error.h index 05274a9d..863c6fa3 100644 --- a/src/datastructures/error.h +++ b/src/datastructures/error.h @@ -112,9 +112,6 @@ void morpho_unreachable(const char *explanation); #define ERROR_ALLOCATIONFAILED "Alloc" #define ERROR_ALLOCATIONFAILED_MSG "Memory allocation failed." -#define ERROR_INTERNALERROR "Intrnl" -#define ERROR_INTERNALERROR_MSG "Internal error (contact developer)." - #define ERROR_ERROR "Err" #define ERROR_ERROR_MSG "Error." diff --git a/src/support/parse.c b/src/support/parse.c index 230ce891..f2b2d443 100644 --- a/src/support/parse.c +++ b/src/support/parse.c @@ -479,7 +479,7 @@ bool parse_arglist(parser *p, tokentype rightdelimiter, unsigned int *nargs, voi return true; } -/** Parses a variable name, or raises and error if a symbol isn't found */ +/** Parses a variable name, or raises an error if a symbol isn't found */ bool parse_variable(parser *p, errorid id, void *out) { PARSE_CHECK(parse_checkrequiredtoken(p, TOKEN_SYMBOL, id)); return parse_symbol(p, out); From a0e657eb7ecdf5e20bc9d59f3139f69feea9d941 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:26:48 -0500 Subject: [PATCH 123/156] Remove unused errors --- src/builtin/functiondefs.c | 3 +-- src/builtin/functiondefs.h | 3 --- src/classes/invocation.c | 1 - src/classes/invocation.h | 3 --- src/core/compile.c | 2 +- src/core/vm.c | 1 - src/datastructures/error.h | 3 --- src/support/parse.c | 2 +- 8 files changed, 3 insertions(+), 15 deletions(-) diff --git a/src/builtin/functiondefs.c b/src/builtin/functiondefs.c index 4b03e9d8..4285b4c9 100644 --- a/src/builtin/functiondefs.c +++ b/src/builtin/functiondefs.c @@ -324,7 +324,7 @@ value builtin_arctan(vm *v, int nargs, value *args) { morpho_runtimeerror(v, MATH_NUMARGS, "arctan"); return MORPHO_NIL; - } + } } /** Remainder */ @@ -747,7 +747,6 @@ void functiondefs_initialize(void) { /* Define errors */ morpho_defineerror(MATH_ARGS, ERROR_HALT, MATH_ARGS_MSG); morpho_defineerror(MATH_NUMARGS, ERROR_HALT, MATH_NUMARGS_MSG); - morpho_defineerror(MATH_ATANARGS, ERROR_HALT, MATH_ATANARGS_MSG); morpho_defineerror(TYPE_NUMARGS, ERROR_HALT, TYPE_NUMARGS_MSG); morpho_defineerror(MAX_ARGS, ERROR_HALT, MAX_ARGS_MSG); morpho_defineerror(APPLY_ARGS, ERROR_HALT, APPLY_ARGS_MSG); diff --git a/src/builtin/functiondefs.h b/src/builtin/functiondefs.h index df4c660e..5946b8ae 100644 --- a/src/builtin/functiondefs.h +++ b/src/builtin/functiondefs.h @@ -52,9 +52,6 @@ #define MATH_NUMARGS "ExpctArgNm" #define MATH_NUMARGS_MSG "Function '%s' expects a single numerical argument." -#define MATH_ATANARGS "AtanArgNm" -#define MATH_ATANARGS_MSG "Function 'arctan' expects either 1 or 2 numerical arguments." - #define TYPE_NUMARGS "TypArgNm" #define TYPE_NUMARGS_MSG "Function '%s' expects one argument." diff --git a/src/classes/invocation.c b/src/classes/invocation.c index a39ad6ed..204adc56 100644 --- a/src/classes/invocation.c +++ b/src/classes/invocation.c @@ -156,5 +156,4 @@ void invocation_initialize(void) { // Invocation error messages morpho_defineerror(INVOCATION_ARGS, ERROR_HALT, INVOCATION_ARGS_MSG); - morpho_defineerror(INVOCATION_METHOD, ERROR_HALT, INVOCATION_METHOD_MSG); } diff --git a/src/classes/invocation.h b/src/classes/invocation.h index 6f2b6aa8..9f11184a 100644 --- a/src/classes/invocation.h +++ b/src/classes/invocation.h @@ -52,9 +52,6 @@ objectinvocation *object_newinvocation(value receiver, value method); #define INVOCATION_ARGS "InvocationArgs" #define INVOCATION_ARGS_MSG "Invocation must be called with an object and a method name as arguments." -#define INVOCATION_METHOD "InvocationMethod" -#define INVOCATION_METHOD_MSG "Method not found." - /* ------------------------------------------------------- * Invocation interface * ------------------------------------------------------- */ diff --git a/src/core/compile.c b/src/core/compile.c index e4b0cbd0..55aa5649 100644 --- a/src/core/compile.c +++ b/src/core/compile.c @@ -3380,7 +3380,7 @@ bool _extracttype(compiler *c, syntaxtreenode *node, value *out) { } if (!compiler_findclasswithnamespace(c, typenode, nsnode->content, labelnode->content, &type)) { - compiler_error(c, typenode, COMPILE_SYMBOLNOTDEFINEDNMSPC, MORPHO_GETCSTRING(nsnode->content), MORPHO_GETCSTRING(labelnode->content)); + compiler_error(c, typenode, COMPILE_UNKNWNTYPENMSPC, MORPHO_GETCSTRING(labelnode->content), MORPHO_GETCSTRING(nsnode->content)); return false; } diff --git a/src/core/vm.c b/src/core/vm.c index 508e9826..60b98a41 100644 --- a/src/core/vm.c +++ b/src/core/vm.c @@ -2205,7 +2205,6 @@ void morpho_initialize(void) { morpho_defineerror(VM_OUTOFBOUNDS, ERROR_HALT, VM_OUTOFBOUNDS_MSG); morpho_defineerror(VM_NONNUMINDX, ERROR_HALT, VM_NONNUMINDX_MSG); morpho_defineerror(VM_DVZR, ERROR_HALT, VM_DVZR_MSG); - morpho_defineerror(VM_GETINDEXARGS, ERROR_HALT, VM_GETINDEXARGS_MSG); morpho_defineerror(VM_MLTPLDSPTCHFLD, ERROR_HALT, VM_MLTPLDSPTCHFLD_MSG); morpho_defineerror(VM_TYPECHK, ERROR_HALT, VM_TYPECHK_MSG); diff --git a/src/datastructures/error.h b/src/datastructures/error.h index 863c6fa3..085fdb86 100644 --- a/src/datastructures/error.h +++ b/src/datastructures/error.h @@ -185,9 +185,6 @@ void morpho_unreachable(const char *explanation); #define VM_DVZR "DvZr" #define VM_DVZR_MSG "Division by zero." -#define VM_GETINDEXARGS "NonintIndex" -#define VM_GETINDEXARGS_MSG "Noninteger array index." - #define VM_MLTPLDSPTCHFLD "MltplDsptchFld" #define VM_MLTPLDSPTCHFLD_MSG "Multiple dispatch could not find an implementation that matches these arguments." diff --git a/src/support/parse.c b/src/support/parse.c index f2b2d443..960034a7 100644 --- a/src/support/parse.c +++ b/src/support/parse.c @@ -1265,7 +1265,7 @@ bool parse_blockstatement(parser *p, void *out) { parse_error(p, false, PARSE_INCOMPLETEEXPRESSION); return false; } else { - PARSE_CHECK(parse_checkrequiredtoken(p, TOKEN_RIGHTCURLYBRACKET, PARSE_MISSINGSEMICOLONEXP)); + PARSE_CHECK(parse_checkrequiredtoken(p, TOKEN_RIGHTCURLYBRACKET, PARSE_BLOCKTERMINATOREXP)); } return parse_addnode(p, NODE_SCOPE, MORPHO_NIL, &start, SYNTAXTREE_UNCONNECTED, body, out); From 836dc1d54190e044dd28bb64471279371569352f Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:40:15 -0500 Subject: [PATCH 124/156] Remove unused errors --- src/geometry/integrate.c | 2 +- src/support/parse.c | 2 -- src/support/parse.h | 6 ------ 3 files changed, 1 insertion(+), 9 deletions(-) diff --git a/src/geometry/integrate.c b/src/geometry/integrate.c index 1cc90c62..b19fcb87 100644 --- a/src/geometry/integrate.c +++ b/src/geometry/integrate.c @@ -2226,7 +2226,7 @@ void integrator_initializequantities(integrator *integrate, int nq, quantity *qu integrate->qval[i]=q; } else if (MORPHO_ISMATRIX(q)) { objectmatrix *m = MORPHO_GETMATRIX(q); - quantity[i].ndof=matrix_countdof(m); + quantity[i].ndof=(int) matrix_countdof(m); objectmatrix *new = matrix_clone(m); // Use a copy of the matrix integrate->qval[i]=MORPHO_OBJECT(new); diff --git a/src/support/parse.c b/src/support/parse.c index 960034a7..846bd00e 100644 --- a/src/support/parse.c +++ b/src/support/parse.c @@ -1862,9 +1862,7 @@ void parse_initialize(void) { morpho_defineerror(PARSE_INCOMPLETEEXPRESSION, ERROR_PARSE, PARSE_INCOMPLETEEXPRESSION_MSG); morpho_defineerror(PARSE_MISSINGPARENTHESIS, ERROR_PARSE, PARSE_MISSINGPARENTHESIS_MSG); morpho_defineerror(PARSE_EXPECTEXPRESSION, ERROR_PARSE, PARSE_EXPECTEXPRESSION_MSG); - morpho_defineerror(PARSE_MISSINGSEMICOLON, ERROR_PARSE, PARSE_MISSINGSEMICOLON_MSG); morpho_defineerror(PARSE_MISSINGSEMICOLONEXP, ERROR_PARSE, PARSE_MISSINGSEMICOLONEXP_MSG); - morpho_defineerror(PARSE_MISSINGSEMICOLONVAR, ERROR_PARSE, PARSE_MISSINGSEMICOLONVAR_MSG); morpho_defineerror(PARSE_VAREXPECTED, ERROR_PARSE, PARSE_VAREXPECTED_MSG); morpho_defineerror(PARSE_SYMBLEXPECTED, ERROR_PARSE, PARSE_SYMBLEXPECTED_MSG); morpho_defineerror(PARSE_BLOCKTERMINATOREXP, ERROR_PARSE, PARSE_BLOCKTERMINATOREXP_MSG); diff --git a/src/support/parse.h b/src/support/parse.h index 9c1ec984..44ab4bb1 100644 --- a/src/support/parse.h +++ b/src/support/parse.h @@ -113,15 +113,9 @@ struct sparser { #define PARSE_EXPECTEXPRESSION "ExpExpr" #define PARSE_EXPECTEXPRESSION_MSG "Expected expression." -#define PARSE_MISSINGSEMICOLON "MssngSemiVal" -#define PARSE_MISSINGSEMICOLON_MSG "Expect ; after value." - #define PARSE_MISSINGSEMICOLONEXP "MssngExpTerm" #define PARSE_MISSINGSEMICOLONEXP_MSG "Expect expression terminator (; or newline) after expression." -#define PARSE_MISSINGSEMICOLONVAR "MssngSemiVar" -#define PARSE_MISSINGSEMICOLONVAR_MSG "Expect ; after variable declaration." - #define PARSE_VAREXPECTED "VarExpct" #define PARSE_VAREXPECTED_MSG "Variable name expected after var." From eaffbbe40eb7477983fd12a8008ac90d5d6b7e54 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:40:54 -0500 Subject: [PATCH 125/156] Remove unused error --- src/support/parse.c | 1 - src/support/parse.h | 3 --- 2 files changed, 4 deletions(-) diff --git a/src/support/parse.c b/src/support/parse.c index 846bd00e..3c559781 100644 --- a/src/support/parse.c +++ b/src/support/parse.c @@ -1873,7 +1873,6 @@ void parse_initialize(void) { morpho_defineerror(PARSE_IFRGHTPARENMISSING, ERROR_PARSE, PARSE_IFRGHTPARENMISSING_MSG); morpho_defineerror(PARSE_WHILELFTPARENMISSING, ERROR_PARSE, PARSE_WHILELFTPARENMISSING_MSG); morpho_defineerror(PARSE_FORLFTPARENMISSING, ERROR_PARSE, PARSE_FORLFTPARENMISSING_MSG); - morpho_defineerror(PARSE_FORSEMICOLONMISSING, ERROR_PARSE, PARSE_FORSEMICOLONMISSING_MSG); morpho_defineerror(PARSE_FORRGHTPARENMISSING, ERROR_PARSE, PARSE_FORRGHTPARENMISSING_MSG); morpho_defineerror(PARSE_FNNAMEMISSING, ERROR_PARSE, PARSE_FNNAMEMISSING_MSG); morpho_defineerror(PARSE_FNLEFTPARENMISSING, ERROR_PARSE, PARSE_FNLEFTPARENMISSING_MSG); diff --git a/src/support/parse.h b/src/support/parse.h index 44ab4bb1..4036ab09 100644 --- a/src/support/parse.h +++ b/src/support/parse.h @@ -146,9 +146,6 @@ struct sparser { #define PARSE_FORLFTPARENMISSING "ForMssngLftPrn" #define PARSE_FORLFTPARENMISSING_MSG "Expected '(' after for." -#define PARSE_FORSEMICOLONMISSING "ForMssngSemi" -#define PARSE_FORSEMICOLONMISSING_MSG "Expected ';'." - #define PARSE_FORRGHTPARENMISSING "ForMssngRgtPrn" #define PARSE_FORRGHTPARENMISSING_MSG "Expected ')' after for clauses." From d29e6f9f6c9df1d3a07338532c2865cbf6683d82 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Thu, 15 Jan 2026 22:53:16 -0500 Subject: [PATCH 126/156] A whole bunch of useful errors --- help/errors.md | 1709 ++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 1709 insertions(+) diff --git a/help/errors.md b/help/errors.md index 55cd1b0b..133b412e 100644 --- a/help/errors.md +++ b/help/errors.md @@ -195,3 +195,1712 @@ Or to be multiplied together, the number of columns of the left hand matrix must var b = Matrix([1,2]) print a*b // ok print b*a // generates a `MtrxIncmptbl` error. + +## DvZr +[tagdvzr]: # (dvzr) + +This error occurs when attempting to divide by zero: + + var a = 5 / 0 // Causes 'DvZr' + +## StckOvflw +[tagstckovflw]: # (stckovflw) + +This error occurs when the call stack exceeds its maximum depth, typically due to excessive recursion or deeply nested function calls. + +## ErrStckOvflw +[tagerrstckovflw]: # (errstckovflw) + +This error occurs when the error handler stack overflows, typically due to errors occurring within error handlers. + +## Exit +[tagexit]: # (exit) + +This error is generated when the virtual machine is halted, typically when the program exits normally. + +## MltplDsptchFld +[tagmltpldsptchfld]: # (mltpldsptchfld) + +This error occurs when multiple dispatch cannot find a method implementation that matches the provided arguments: + + class A { } + class B { } + fn method(a: A) { } + fn method(b: B) { } + method(1) // Causes 'MltplDsptchFld' - no matching method for integer + +## TypeChk +[tagtypechk]: # (typechk) + +This error occurs when there is a type violation, such as attempting to assign a value of one type to a variable declared with a different type: + + var x: String = 5 // Causes 'TypeChk' + +## NoOptArg +[tagnooptarg]: # (nooptarg) + +This error occurs when you try to pass optional arguments to a function that doesn't accept them: + + fn f(x) { return x } + f(1, y: 2) // Causes 'NoOptArg' + +## UnkwnOptArg +[tagunkwnoptarg]: # (unkwnoptarg) + +This error occurs when you pass an unknown optional argument to a function: + + fn f(x, y: 1) { return x + y } + f(1, z: 2) // Causes 'UnkwnOptArg' + +## InvldArgsBltn +[taginvldargsbltn]: # (invldargsbltn) + +This error occurs when a built-in function is called with arguments of the wrong type: + + print(1, 2, 3) // If print expects a string, causes 'InvldArgsBltn' + +## ArrayArgs +[tagarrayargs]: # (arrayargs) + +This error occurs when creating an Array with invalid arguments. Arrays must be created with integer dimensions: + + var a = Array("invalid") // Causes 'ArrayArgs' + +## ArrayInit +[tagarrayinit]: # (arrayinit) + +This error occurs when an Array initializer is not an array or list: + + var a = Array(2, 2, "invalid") // Causes 'ArrayInit' + +## ArrayCmpt +[tagarraycmpt]: # (arraycmpt) + +This error occurs when an Array initializer has dimensions that don't match the requested dimensions: + + var a = Array(2, 2, [[1,2,3]]) // Causes 'ArrayCmpt' if dimensions don't match + +## ArrayIndx +[tagarrayindx]: # (arrayindx) + +This error occurs when indexing an Array with non-integer indices: + + var a[2,2] + a["x", "y"] // Causes 'ArrayIndx' + +## BrkOtsdLp +[tagbrkotsdlp]: # (brkotsdlp) + +This error occurs when a `break` statement is encountered outside of a loop: + + break // Causes 'BrkOtsdLp' + +## CntOtsdLp +[tagcntotsdlp]: # (cntotsdlp) + +This error occurs when a `continue` statement is encountered outside of a loop: + + continue // Causes 'CntOtsdLp' + +## ClssCrcRf +[tagclsscrcrf]: # (clsscrcrf) + +This error occurs when a class attempts to inherit from itself: + + class A < A { } // Causes 'ClssCrcRf' + +## ClssDplctImpl +[tagclssdplctimpl]: # (clssdplctimpl) + +This error occurs when a class has duplicate method implementations with the same signature: + + class A { + fn method() { } + fn method() { } // Causes 'ClssDplctImpl' + } + +## ClssLnrz +[tagclsslnrz]: # (clsslnrz) + +This error occurs when morpho cannot linearize a class hierarchy due to conflicting inheritance order. Check parent and ancestor classes for inheritance issues. + +## SlfOtsdClss +[tagslfotsdclss]: # (slfotsdclss) + +This error occurs when `self` is used outside of a class method: + + print self // Causes 'SlfOtsdClss' + +## SprOtsdClss +[tagsprotsdclss]: # (sprotsdclss) + +This error occurs when `super` is used outside of a class method: + + print super // Causes 'SprOtsdClss' + +## SprSelMthd +[tagsprselmthd]: # (sprselmthd) + +This error occurs when `super` is used incorrectly. It can only be used to select a method: + + super // Causes 'SprSelMthd' + super.method() // OK + +## SprNtFnd +[tagsprntfnd]: # (sprntfnd) + +This error occurs when a superclass cannot be found: + + class A < NonExistent { } // Causes 'SprNtFnd' + +## TooMnyArg +[tagtoomnyarg]: # (toomnyarg) + +This error occurs when too many arguments are passed to a function: + + fn f(x) { return x } + f(1, 2, 3) // Causes 'TooMnyArg' + +## TooMnyPrm +[tagtoomnyprm]: # (toomnyprm) + +This error occurs when a function is defined with too many parameters (exceeding the maximum allowed). + +## TooMnyCnst +[tagtoomnycnst]: # (toomnycnst) + +This error occurs when a program has too many constants (exceeding the maximum allowed). + +## VblDcl +[tagvbldcl]: # (vbldcl) + +This error occurs when a variable is declared multiple times in the same scope: + + var x = 1 + var x = 2 // Causes 'VblDcl' + +## FlNtFnd +[tagflntfnd]: # (flntfnd) + +This error occurs when a file cannot be found: + + import "nonexistent.morpho" // Causes 'FlNtFnd' + +## MdlNtFnd +[tagmdlntfnd]: # (mdlntfnd) + +This error occurs when a module cannot be found: + + import nonexistent // Causes 'MdlNtFnd' + +## ImprtFld +[tagimprtfld]: # (imprtfld) + +This error occurs when an import statement fails: + + import "broken.morpho" // Causes 'ImprtFld' if the file has errors + +## UnrslvdFrwdRf +[tagunrslvdfrwdrf]: # (unrslvdfrwdrf) + +This error occurs when a function is called before it is defined in the same scope: + + f() // Causes 'UnrslvdFrwdRf' + fn f() { } + +## MltVarPrmtr +[tagmltvarprmtr]: # (mltvarprmtr) + +This error occurs when a function has more than one variadic parameter: + + fn f(...args1, ...args2) { } // Causes 'MltVarPrmtr' + +## VarPrLst +[tagvarprlst]: # (varprlst) + +This error occurs when fixed parameters are placed after a variadic parameter: + + fn f(...args, x) { } // Causes 'VarPrLst' + +## OptPrmDflt +[tagoptprmdflt]: # (optprmdflt) + +This error occurs when an optional parameter's default value is not a constant: + + var x = 1 + fn f(y: x) { } // Causes 'OptPrmDflt' + +## MssngLoopBdy +[tagmssngloopbdy]: # (mssngloopbdy) + +This error occurs when a loop statement is missing its body: + + for (var i = 0; i < 10; i++) // Causes 'MssngLoopBdy' + +## NstdClss +[tagnstdclss]: # (nstdclss) + +This error occurs when attempting to define a class within another class: + + class A { + class B { } // Causes 'NstdClss' + } + +## InvldAssgn +[taginvldassgn]: # (invldassgn) + +This error occurs when attempting to assign to an invalid target: + + 5 = 10 // Causes 'InvldAssgn' + +## FnPrmSymb +[tagfnprmsymb]: # (fnprmsymb) + +This error occurs when function parameters are not symbols: + + fn f(5) { } // Causes 'FnPrmSymb' + +## PptyNmRqd +[tagpptynmrqd]: # (pptynmrqd) + +This error occurs when a property name is required but not provided. + +## InitRtn +[taginitrtn]: # (initrtn) + +This error occurs when attempting to return a value from an initializer method: + + class A { + init() { + return 5 // Causes 'InitRtn' + } + } + +## MssngIndx +[tagmssngindx]: # (mssngindx) + +This error occurs when indexing syntax is incomplete, missing required indices. + +## MssngIntlzr +[tagmssngintlzr]: # (mssngintlzr) + +This error occurs when a typed variable is declared without an initializer: + + var x: String // Causes 'MssngIntlzr' if initialization is required + +## TypeErr +[tagtypeerr]: # (typeerr) + +This error occurs when there is a type violation during assignment: + + var x: String + x = 5 // Causes 'TypeErr' + +## UnknwnType +[tagunknwntype]: # (unknwntype) + +This error occurs when an unknown type is referenced: + + var x: UnknownType // Causes 'UnknwnType' + +## UnknwnNmSpc +[tagunknwnnmspc]: # (unknwnnmspc) + +This error occurs when an unknown namespace is referenced: + + import unknown::module // Causes 'UnknwnNmSpc' + +## UnknwnTypeNmSpc +[tagunknwntypenmspc]: # (unknwntypenmspc) + +This error occurs when an unknown type is referenced in a namespace: + + var x: unknown::Type // Causes 'UnknwnTypeNmSpc' + +## SymblUndfNmSpc +[tagsymblundfnmspc]: # (symblundfnmspc) + +This error occurs when a symbol is not defined in the specified namespace: + + unknown::symbol // Causes 'SymblUndfNmSpc' + +## IncExp +[tagincexp]: # (incexp) + +This error occurs when an expression is incomplete: + + var x = 5 + // Causes 'IncExp' + +## MssngParen +[tagmssngparen]: # (mssngparen) + +This error occurs when a closing parenthesis is missing: + + fn f(x // Causes 'MssngParen' + +## ExpExpr +[tagexpexpr]: # (expexpr) + +This error occurs when an expression is expected but not found: + + var x = // Causes 'ExpExpr' + +## MssngExpTerm +[tagmssngexpterm]: # (mssngexpterm) + +This error occurs when an expression terminator (semicolon or newline) is missing after an expression. + +## VarExpct +[tagvarexpct]: # (varexpct) + +This error occurs when a variable name is expected after `var`: + + var // Causes 'VarExpct' + +## SymblExpct +[tagsymblexpct]: # (symblexpct) + +This error occurs when a symbol is expected but not found. + +## MssngBrc +[tagmssngbrc]: # (mssngbrc) + +This error occurs when a closing brace is missing: + + fn f() { // Causes 'MssngBrc' + +## MssngSqBrc +[tagmssngsqbrc]: # (mssngsqbrc) + +This error occurs when a closing square bracket is missing: + + var x = [1, 2 // Causes 'MssngSqBrc' + +## MssngComma +[tagmssngcomma]: # (mssngcomma) + +This error occurs when a comma is expected: + + var x = [1 2] // Causes 'MssngComma' + +## TrnryMssngColon +[tagtrnymssngcolon]: # (trnymssngcolon) + +This error occurs when a colon is missing in a ternary operator: + + var x = true ? 1 // Causes 'TrnryMssngColon' + +## IfMssngLftPrn +[tagifmssnglftprn]: # (ifmssnglftprn) + +This error occurs when a left parenthesis is missing after `if`: + + if x > 0 { } // Causes 'IfMssngLftPrn' + +## IfMssngRgtPrn +[tagifmssngrgtprn]: # (ifmssngrgtprn) + +This error occurs when a right parenthesis is missing after an if condition: + + if (x > 0 { } // Causes 'IfMssngRgtPrn' + +## WhlMssngLftPrn +[tagwhlmssnglftprn]: # (whlmssnglftprn) + +This error occurs when a left parenthesis is missing after `while`: + + while x > 0 { } // Causes 'WhlMssngLftPrn' + +## ForMssngLftPrn +[tagformssnglftprn]: # (formssnglftprn) + +This error occurs when a left parenthesis is missing after `for`: + + for var i = 0; i < 10; i++ { } // Causes 'ForMssngLftPrn' + +## ForMssngRgtPrn +[tagformssngrgtprn]: # (formssngrgtprn) + +This error occurs when a right parenthesis is missing after for clauses: + + for (var i = 0; i < 10; i++ { } // Causes 'ForMssngRgtPrn' + +## FnNoName +[tagfnoname]: # (fnoname) + +This error occurs when a function or method name is expected but not found: + + fn () { } // Causes 'FnNoName' + +## FnMssngLftPrn +[tagfnmssnglftprn]: # (fnmssnglftprn) + +This error occurs when a left parenthesis is missing after a function name: + + fn f { } // Causes 'FnMssngLftPrn' + +## FnMssngRgtPrn +[tagfnmssngrgtprn]: # (fnmssngrgtprn) + +This error occurs when a right parenthesis is missing after function parameters: + + fn f(x { } // Causes 'FnMssngRgtPrn' + +## FnMssngLftBrc +[tagfnmssnglftbrc]: # (fnmssnglftbrc) + +This error occurs when a left brace is missing before a function body: + + fn f() // Causes 'FnMssngLftBrc' + +## CllMssngRgtPrn +[tagcllmssngrgtprn]: # (cllmssngrgtprn) + +This error occurs when a right parenthesis is missing after function call arguments: + + f(x // Causes 'CllMssngRgtPrn' + +## ClsNmMssng +[tagclsnmssng]: # (clsnmssng) + +This error occurs when a class name is expected but not found: + + class { } // Causes 'ClsNmMssng' + +## ClsMssngLftBrc +[tagclsmssnglftbrc]: # (clsmssnglftbrc) + +This error occurs when a left brace is missing before a class body: + + class A // Causes 'ClsMssngLftBrc' + +## ClsMssngRgtBrc +[tagclsmssngrgtbrc]: # (clsmssngrgtbrc) + +This error occurs when a right brace is missing after a class body: + + class A { // Causes 'ClsMssngRgtBrc' + +## ExpctDtSpr +[tagexpctdtspr]: # (expctdtspr) + +This error occurs when a dot is expected after `super`: + + super method() // Causes 'ExpctDtSpr' + super.method() // OK + +## SprNmMssng +[tagsprnmssng]: # (sprnmssng) + +This error occurs when a superclass name is expected but not found: + + class A < { } // Causes 'SprNmMssng' + +## MxnNmMssng +[tagmxnnmssng]: # (mxnnmssng) + +This error occurs when a mixin class name is expected but not found. + +## IntrpIncmp +[tagintrpincmp]: # (intrpincmp) + +This error occurs when a string interpolation is incomplete: + + var x = "Hello ${" // Causes 'IntrpIncmp' + +## EmptyIndx +[tagemptyindx]: # (emptyindx) + +This error occurs when a variable declaration has an empty capacity: + + var x[] // Causes 'EmptyIndx' + +## ImprtMssngNm +[tagimprtmssngnm]: # (imprtmssngnm) + +This error occurs when an import statement is missing a module or file name: + + import // Causes 'ImprtMssngNm' + +## ImprtMltplAs +[tagimprtmltplas]: # (imprtmltplas) + +This error occurs when an import statement has multiple `as` clauses: + + import module as A as B // Causes 'ImprtMltplAs' + +## ImprtExpctFrAs +[tagimprtexpctfras]: # (imprtexpctfras) + +This error occurs when an import statement doesn't have the expected format: + + import module invalid // Causes 'ImprtExpctFrAs' + +## ExpctSymblAftrAs +[tagexpctsymblaftras]: # (expctsymblaftras) + +This error occurs when a symbol is expected after `as` in an import: + + import module as // Causes 'ExpctSymblAftrAs' + +## ExpctSymblAftrFr +[tagexpctsymblaftrfr]: # (expctsymblaftrfr) + +This error occurs when a symbol is expected after `for` in an import: + + import module for // Causes 'ExpctSymblAftrFr' + +## DctSprtr +[tagdctsprtr]: # (dctsprtr) + +This error occurs when a colon is missing in a dictionary key-value pair: + + var d = {"key" "value"} // Causes 'DctSprtr' + +## DctEntrySprtr +[tagdctentrysprtr]: # (dctentrysprtr) + +This error occurs when a comma is missing between dictionary entries: + + var d = {"a": 1 "b": 2} // Causes 'DctEntrySprtr' + +## DctTrmntr +[tagdcttrmntr]: # (dcttrmntr) + +This error occurs when a closing brace is missing in a dictionary: + + var d = {"a": 1 // Causes 'DctTrmntr' + +## SwtchSprtr +[tagswtchsprtr]: # (swtchsprtr) + +This error occurs when a colon is missing after a switch label: + + switch x { + case 1 // Causes 'SwtchSprtr' + } + +## ExpctWhl +[tagexpctwhl]: # (expctwhl) + +This error occurs when `while` is expected after a do-while loop body: + + do { + // body + } // Causes 'ExpctWhl' + +## ExpctCtch +[tagexpctctch]: # (expctctch) + +This error occurs when `catch` is expected after a `try` statement: + + try { + // code + } // Causes 'ExpctCtch' + +## ExpctHndlr +[tagexpcthndlr]: # (expcthndlr) + +This error occurs when an error handler block is expected after `catch`: + + try { + // code + } catch // Causes 'ExpctHndlr' + +## InvldLbl +[taginvldlbl]: # (invldlbl) + +This error occurs when an invalid label is used in a catch statement. + +## OneVarPr +[tagonevarpr]: # (onevarpr) + +This error occurs when a function has more than one variadic parameter (same as `MltVarPrmtr`). + +## ValRng +[tagvalrng]: # (valrng) + +This error occurs when a value is out of the expected range. + +## StrEsc +[tagstresc]: # (stresc) + +This error occurs when an unrecognized escape sequence is used in a string: + + var s = "\q" // Causes 'StrEsc' + +## RcrsnLmt +[tagrcrsnlmt]: # (rcrsnlmt) + +This error occurs when the parser recursion depth is exceeded, typically due to deeply nested expressions. + +## UnescpdCtrl +[tagunescpdctrl]: # (unescpdctrl) + +This error occurs when an unescaped control character is found in a string literal. + +## InvldUncd +[taginvlduncd]: # (invlduncd) + +This error occurs when an invalid unicode escape sequence is used in a string: + + var s = "\uZZZZ" // Causes 'InvldUncd' + +## UnrcgnzdTok +[tagunrcgnzdtok]: # (unrcgnzdtok) + +This error occurs when the parser encounters an unrecognized token. + +## UntrmComm +[taguntrmcomm]: # (untrmcomm) + +This error occurs when a multiline comment is not terminated: + + /* This comment // Causes 'UntrmComm' + +## UntrmStrng +[taguntrmstrng]: # (untrmstrng) + +This error occurs when a string literal is not terminated: + + var s = "This string // Causes 'UntrmStrng' + +## UnrgnzdTkn +[tagunrgnzdtkn]: # (unrgnzdtkn) + +This error occurs when the lexer encounters an unrecognized token. + +## MtrxBnds +[tagmtrxbnds]: # (mtrxbnds) + +This error occurs when attempting to access a matrix element with an index that is out of bounds: + + var m = Matrix([[1,2],[3,4]]) + print m[10, 10] // Causes 'MtrxBnds' + +## MtrxInvldIndx +[tagmtrxinvldindx]: # (mtrxinvldindx) + +This error occurs when matrix indices are not integers: + + var m = Matrix([[1,2],[3,4]]) + print m["x", "y"] // Causes 'MtrxInvldIndx' + +## MtrxInvldNumIndx +[tagmtrxinvldnumindx]: # (mtrxinvldnumindx) + +This error occurs when a matrix is indexed with the wrong number of indices: + + var m = Matrix([[1,2],[3,4]]) + print m[1] // Causes 'MtrxInvldNumIndx' (needs two indices) + +## MtrxCns +[tagmtrxcns]: # (mtrxcns) + +This error occurs when the Matrix constructor is called with invalid arguments. It should be called with dimensions or an array/list/matrix initializer: + + var m = Matrix("invalid") // Causes 'MtrxCns' + +## MtrxIdnttyCns +[tagmtrxidnttycns]: # (mtrxidnttycns) + +This error occurs when IdentityMatrix is called with invalid arguments. It expects a single dimension: + + var m = IdentityMatrix() // Causes 'MtrxIdnttyCns' + +## MtrxInvldInit +[tagmtrxinvldinit]: # (mtrxinvldinit) + +This error occurs when an invalid initializer is passed to the Matrix constructor: + + var m = Matrix([["invalid"]]) // Causes 'MtrxInvldInit' if incompatible + +## MtrxInvldArg +[tagmtrxinvldarg]: # (mtrxinvldarg) + +This error occurs when matrix arithmetic methods receive invalid arguments: + + var m = Matrix([[1,2],[3,4]]) + m + "string" // Causes 'MtrxInvldArg' + +## MtrxRShpArg +[tagmtrxrshparg]: # (mtrxrshparg) + +This error occurs when the reshape method is called with invalid arguments. It requires two integer arguments: + + var m = Matrix([[1,2],[3,4]]) + m.reshape("invalid") // Causes 'MtrxRShpArg' + +## MtrxIncmptbl +[tagmtrxincmptbl]: # (mtrxincmptbl) + +This error occurs when matrices have incompatible shapes for an operation. See the main documentation above for examples. + +## MtrxSnglr +[tagmtrxsnglr]: # (mtrxsnglr) + +This error occurs when attempting to invert a singular (non-invertible) matrix: + + var m = Matrix([[1,2],[2,4]]) // Singular matrix + m.inverse() // Causes 'MtrxSnglr' + +## MtrxNtSq +[tagmtrxntsq]: # (mtrxntsq) + +This error occurs when a matrix operation requires a square matrix but a non-square matrix is provided: + + var m = Matrix([[1,2,3],[4,5,6]]) // 2x3 matrix + m.inverse() // Causes 'MtrxNtSq' + +## MtrxOpFld +[tagmtrxopfld]: # (mtrxopfld) + +This error occurs when a matrix operation fails for an unspecified reason. + +## MtrxNrmArgs +[tagmtrxnrmargs]: # (mtrxnrmargs) + +This error occurs when the norm method is called with invalid arguments. It expects an optional numerical argument: + + var m = Matrix([[1,2],[3,4]]) + m.norm("invalid") // Causes 'MtrxNrmArgs' + +## MtrxStClArgs +[tagmtrxstclargs]: # (mtrxstclargs) + +This error occurs when setcolumn is called with invalid arguments. It expects an integer column index and a column matrix: + + var m = Matrix([[1,2],[3,4]]) + m.setcolumn("invalid", Matrix([1,2])) // Causes 'MtrxStClArgs' + +## LnAlgMtrxIncmptbl +[taglnalgmtrxincmptbl]: # (lnalgmtrxincmptbl) + +This error occurs when matrices have incompatible shapes in linear algebra operations. + +## LnAlgMtrxIndxBnds +[taglnalgmtrxindxbnds]: # (lnalgmtrxindxbnds) + +This error occurs when a matrix index is out of bounds in linear algebra operations. + +## LnAlgMtrxSnglr +[taglnalgmtrxsnglr]: # (lnalgmtrxsnglr) + +This error occurs when a matrix is singular in linear algebra operations. + +## LnAlgMtrxNtSq +[taglnalgmtrxntsq]: # (lnalgmtrxntsq) + +This error occurs when a matrix is not square in linear algebra operations. + +## LnAlgLapackArgs +[taglnalglapackargs]: # (lnalglapackargs) + +This error occurs when a LAPACK function is called with invalid arguments. + +## LnAlgMtrxOpFld +[taglnalgmtrxopfld]: # (lnalgmtrxopfld) + +This error occurs when a matrix operation fails in the linear algebra library. + +## LnAlgMtrxNtSpprtd +[taglnalgmtrxntspprtd]: # (lnalgmtrxntspprtd) + +This error occurs when an operation is not supported for a particular matrix type. + +## LnAlgMtrxInvldArg +[taglnalgmtrxinvldarg]: # (lnalgmtrxinvldarg) + +This error occurs when invalid arguments are passed to a matrix method in the linear algebra library. + +## LnAlgMtrxNnNmrclArg +[taglnalgmtrxnnnmrclarg]: # (lnalgmtrxnnnmrclarg) + +This error occurs when a matrix method requires numerical arguments but receives non-numerical ones. + +## LnAlgMtrxNrmArgs +[taglnalgmtrxnrmargs]: # (lnalgmtrxnrmargs) + +This error occurs when the norm method is called with an unsupported argument. It requires 1 or inf: + + var m = Matrix([[1,2],[3,4]]) + m.norm(2) // Causes 'LnAlgMtrxNrmArgs' if 2 is not supported + +## LnAlgInvldArg +[taglnalginvldarg]: # (lnalginvldarg) + +This error occurs when matrix arithmetic methods receive invalid arguments: + + var m = Matrix([[1,2],[3,4]]) + m + "string" // Causes 'LnAlgInvldArg' + +## SprsCns +[tagsprscns]: # (sprscns) + +This error occurs when the Sparse constructor is called with invalid arguments. It should be called with dimensions or an array initializer: + + var s = Sparse("invalid") // Causes 'SprsCns' + +## SprsInvldInit +[tagsprsinvldinit]: # (sprsinvldinit) + +This error occurs when an invalid initializer is passed to the Sparse constructor. + +## SprsSt +[tagsprsst]: # (sprsst) + +This error occurs when attempting to set a sparse matrix element fails. + +## SprsCnvFld +[tagsprscnvfld]: # (sprscnvfld) + +This error occurs when sparse format conversion fails. + +## SprsOpFld +[tagsprsopfld]: # (sprsopfld) + +This error occurs when a sparse matrix operation fails. + +## CmplxCns +[tagcmplxcns]: # (cmplxcns) + +This error occurs when the Complex constructor is called with invalid arguments. It should be called with two floats: + + var c = Complex(1) // Causes 'CmplxCns' + +## CmplxInvldArg +[tagcmplxinvldarg]: # (cmplxinvldarg) + +This error occurs when complex arithmetic methods receive invalid arguments: + + var c = Complex(1, 2) + c + "string" // Causes 'CmplxInvldArg' + +## CmpxArg +[tagcmpxarg]: # (cmpxarg) + +This error occurs when a complex operation receives unexpected arguments. + +## LstArgs +[taglstargs]: # (lstargs) + +This error occurs when a List is created with invalid arguments. Lists must be called with integer dimensions: + + var l = List("invalid") // Causes 'LstArgs' + +## LstNumArgs +[taglstnumargs]: # (lstnumargs) + +This error occurs when a List is indexed with more than one argument: + + var l = [1, 2, 3] + l[1, 2] // Causes 'LstNumArgs' + +## LstAddArgs +[taglstaddargs]: # (lstaddargs) + +This error occurs when the add method receives invalid arguments. It requires a list: + + var l = [1, 2, 3] + l.add("invalid") // Causes 'LstAddArgs' + +## LstSrtFn +[taglstsrtfn]: # (lstsrtfn) + +This error occurs when a list sort function doesn't return an integer: + + var l = [3, 1, 2] + l.sort(fn(a, b) { return "invalid" }) // Causes 'LstSrtFn' + +## EntryNtFnd +[tagentryntfnd]: # (entryntfnd) + +This error occurs when an entry is not found in a list: + + var l = [1, 2, 3] + l.remove(10) // Causes 'EntryNtFnd' + +## TplArgs +[tagtplargs]: # (tplargs) + +This error occurs when a Tuple is created with invalid arguments. Tuples must be called with integer dimensions: + + var t = Tuple("invalid") // Causes 'TplArgs' + +## TpmNumArgs +[tagtpmnumargs]: # (tpmnumargs) + +This error occurs when a Tuple is indexed with more than one argument: + + var t = (1, 2, 3) + t[1, 2] // Causes 'TpmNumArgs' + +## DctKyNtFnd +[tagdctkyntfnd]: # (dctkyntfnd) + +This error occurs when a key is not found in a dictionary: + + var d = {"a": 1} + print d["b"] // Causes 'DctKyNtFnd' + +## DctStArg +[tagdctstarg]: # (dctstarg) + +This error occurs when dictionary set methods (union, intersection, difference) receive invalid arguments. They expect a dictionary: + + var d1 = {"a": 1} + d1.union("invalid") // Causes 'DctStArg' + +## FlOpnFld +[tagflopnfld]: # (flopnfld) + +This error occurs when a file cannot be opened: + + var f = File("nonexistent.txt", "read") // Causes 'FlOpnFld' if file doesn't exist + +## FlNmMssng +[tagflnmssng]: # (flnmssng) + +This error occurs when a filename is missing in a File operation: + + var f = File() // Causes 'FlNmMssng' + +## FlNmArgs +[tagflnmargs]: # (flnmargs) + +This error occurs when the first argument to File is not a filename: + + var f = File(123, "read") // Causes 'FlNmArgs' + +## FlMode +[tagflmode]: # (flmode) + +This error occurs when the second argument to File is not a valid mode. It should be 'read', 'write', or 'append': + + var f = File("test.txt", "invalid") // Causes 'FlMode' + +## FlWrtArgs +[tagflwrtargs]: # (flwrtargs) + +This error occurs when File.write receives non-string arguments: + + var f = File("test.txt", "write") + f.write(123) // Causes 'FlWrtArgs' + +## FlWrtFld +[tagflwrtfld]: # (flwrtfld) + +This error occurs when writing to a file fails. + +## FldrExpctPth +[tagfldrexpctpth]: # (fldrexpctpth) + +This error occurs when folder methods receive invalid arguments. They expect a path: + + Folder.exists(123) // Causes 'FldrExpctPth' + +## NtFldr +[tagntfldr]: # (ntfldr) + +This error occurs when a path is not a folder: + + Folder.exists("file.txt") // May cause 'NtFldr' if it's a file, not a folder + +## FldrCrtFld +[tagfldrcrtfld]: # (fldrcrtfld) + +This error occurs when folder creation fails: + + Folder.create("/invalid/path") // Causes 'FldrCrtFld' + +## RngArgs +[tagrngargs]: # (rngargs) + +This error occurs when Range receives invalid arguments. It expects numerical arguments: a start, an end, and an optional stepsize: + + Range("invalid") // Causes 'RngArgs' + +## RngStpSz +[tagrngstpsz]: # (rngstpsz) + +This error occurs when a Range stepsize is too small: + + Range(0, 10, 0.0000001) // May cause 'RngStpSz' if too small + +## ExpctNmArgs +[tagexpctnmargs]: # (expctnmargs) + +This error occurs when a function expects numerical arguments but receives non-numerical ones: + + sqrt("string") // Causes 'ExpctNmArgs' + +## ExpctArgNm +[tagexpctargnm]: # (expctargnm) + +This error occurs when a function expects a single numerical argument but receives something else: + + abs() // Causes 'ExpctArgNm' + +## TypArgNm +[tagtypargnm]: # (typargnm) + +This error occurs when a function expects one argument but receives a different number: + + type() // May cause 'TypArgNm' if no arguments provided + +## MnMxArgs +[tagmnmxargs]: # (mnmxargs) + +This error occurs when min or max functions receive invalid arguments. They expect at least one numerical argument, list, or matrix: + + min() // Causes 'MnMxArgs' + +## ApplyArgs +[tagapplyargs]: # (applyargs) + +This error occurs when the apply function receives fewer than two arguments: + + apply() // Causes 'ApplyArgs' + +## ApplyNtCllble +[tagapplyntcllble]: # (applyntcllble) + +This error occurs when apply receives a non-callable object as its first argument: + + apply("not a function", [1, 2, 3]) // Causes 'ApplyNtCllble' + +## FrmtArg +[tagfrmtarg]: # (frmtarg) + +This error occurs when the format method receives invalid arguments. It requires a format string: + + "test".format(123) // Causes 'FrmtArg' if format string expected + +## InvldFrmt +[taginvldfrmt]: # (invldfrmt) + +This error occurs when an invalid format string is provided: + + "test".format("%Z") // May cause 'InvldFrmt' if %Z is invalid + +## ErrorArgs +[tagerrorargs]: # (errorargs) + +This error occurs when the Error constructor is called with invalid arguments. It must be called with a tag and a default message: + + Error("Tag") // Causes 'ErrorArgs' + +## Err +[tagerr]: # (err) + +This is a generic error tag used for general error conditions. + +## EnmrtArgs +[tagenmrtargs]: # (enmrtargs) + +This error occurs when the enumerate method receives invalid arguments. It expects a single integer argument: + + var obj = Object() + obj.enumerate("invalid") // Causes 'EnmrtArgs' + +## IndxArgs +[tagindxargs]: # (indxargs) + +This error occurs when the index method receives invalid arguments. It expects a String property name: + + var obj = Object() + obj.index(123) // Causes 'IndxArgs' + +## SetIndxArgs +[tagsetindxargs]: # (setindxargs) + +This error occurs when the setindex method receives invalid arguments. It expects an index and a value: + + var obj = Object() + obj.setindex(1) // Causes 'SetIndxArgs' (missing value) + +## RspndsToArg +[tagrspndstoarg]: # (rspndstoarg) + +This error occurs when the respondsto method receives invalid arguments. It expects a single string argument or no argument: + + var obj = Object() + obj.respondsto(123) // Causes 'RspndsToArg' + +## HasArg +[taghasarg]: # (hasarg) + +This error occurs when the has method receives invalid arguments. It expects a single string argument or no argument: + + var obj = Object() + obj.has(123) // Causes 'HasArg' + +## IsMmbrArg +[tagismmbrarg]: # (ismmbrarg) + +This error occurs when the ismember method receives invalid arguments. It expects a single argument: + + var obj = Object() + obj.ismember() // Causes 'IsMmbrArg' + +## ObjCantClone +[tagobjcantclone]: # (objcantclone) + +This error occurs when attempting to clone an object that cannot be cloned: + + var obj = Object() + obj.clone() // May cause 'ObjCantClone' if cloning not supported + +## ObjImmutable +[tagobjimmutable]: # (objimmutable) + +This error occurs when attempting to modify an immutable object: + + var obj = Object() + // If obj is immutable: + obj.property = "value" // Causes 'ObjImmutable' + +## ObjNoPrp +[tagobjnoprp]: # (objnoprp) + +This error occurs when an object does not provide properties: + + var obj = Object() + obj.property // May cause 'ObjNoPrp' if object doesn't support properties + +## InvocationArgs +[taginvocationargs]: # (invocationargs) + +This error occurs when Invocation is called with invalid arguments. It must be called with an object and a method name: + + Invocation() // Causes 'InvocationArgs' + +## SystmSlpArgs +[tagsystmslpargs]: # (systmslpargs) + +This error occurs when the sleep method receives invalid arguments. It expects a time in seconds: + + sleep("invalid") // Causes 'SystmSlpArgs' + +## SystmStWrkDr +[tagsystmstwrkdr]: # (systmstwrkdr) + +This error occurs when setting the working directory fails: + + System.setworkingdirectory("/invalid/path") // Causes 'SystmStWrkDr' + +## SystmStWrkDrArgs +[tagsystmstwrkdrargs]: # (systmstwrkdrargs) + +This error occurs when setworkingdirectory receives invalid arguments. It expects a path name: + + System.setworkingdirectory(123) // Causes 'SystmStWrkDrArgs' + +## JSONPrsArgs +[tagjsonprsargs]: # (jsonprsargs) + +This error occurs when JSON.parse receives invalid arguments. It requires a string: + + JSON.parse(123) // Causes 'JSONPrsArgs' + +## JSONObjctKey +[tagjsonobjctkey]: # (jsonobjctkey) + +This error occurs when a JSON object key is not a string: + + JSON.parse('{123: "value"}') // Causes 'JSONObjctKey' + +## JSONNmbrFrmt +[tagjsonnmbrfrmt]: # (jsonnmbrfrmt) + +This error occurs when a number in JSON is improperly formatted: + + JSON.parse('{"num": 1.2.3}') // Causes 'JSONNmbrFrmt' + +## JSONExtrnsTkn +[tagjsonextrnstkn]: # (jsonextrnstkn) + +This error occurs when there is an extraneous token after a JSON element: + + JSON.parse('{"a": 1} extra') // Causes 'JSONExtrnsTkn' + +## JSONBlnkElmnt +[tagjsonblnkelmnt]: # (jsonblnkelmnt) + +This error occurs when a blank element is found in JSON: + + JSON.parse('[,]') // Causes 'JSONBlnkElmnt' + +## MshFlNtFnd +[tagmshflntfnd]: # (mshflntfnd) + +This error occurs when a mesh file cannot be found: + + var m = Mesh("nonexistent.mesh") // Causes 'MshFlNtFnd' + +## MshArgs +[tagmshargs]: # (mshargs) + +This error occurs when Mesh receives invalid arguments. It expects either a single file name or no arguments: + + var m = Mesh(123) // Causes 'MshArgs' + +## MshVrtMtrxDim +[tagmshvrtmtrxdim]: # (mshvrtmtrxdim) + +This error occurs when vertex matrix dimensions are inconsistent with the mesh. + +## MshLdVrtDim +[tagmshldvrtdim]: # (mshldvrtdim) + +This error occurs when a vertex has inconsistent dimensions when loading a mesh file. + +## MshLdVrtCrd +[tagmshldvrtcrd]: # (mshldvrtcrd) + +This error occurs when a vertex has non-numerical coordinates when loading a mesh file. + +## MshLdPrsErr +[tagmshldprserr]: # (mshldprserr) + +This error occurs when there is a parse error in a mesh file. + +## MshLdVrtNm +[tagmshldvrtnm]: # (mshldvrtnm) + +This error occurs when an element has an incorrect number of vertices when loading a mesh file. + +## MshLdVrtId +[tagmshldvrtid]: # (mshldvrtid) + +This error occurs when a vertex id is not an integer when loading a mesh file. + +## MshLdVrtNtFnd +[tagmshldvrtntfnd]: # (mshldvrtntfnd) + +This error occurs when a vertex is not found when loading a mesh file. + +## MshStVrtPsnArgs +[tagmshstvrtpsnargs]: # (mshstvrtpsnargs) + +This error occurs when setvertexposition receives invalid arguments. It expects a vertex id and a position matrix: + + var m = Mesh() + m.setvertexposition("invalid") // Causes 'MshStVrtPsnArgs' + +## MshVrtPsnArgs +[tagmshvrtpsnargs]: # (mshvrtpsnargs) + +This error occurs when vertexposition receives invalid arguments. It expects a vertex id: + + var m = Mesh() + m.vertexposition() // Causes 'MshVrtPsnArgs' + +## MshInvldId +[tagmshinvldid]: # (mshinvldid) + +This error occurs when an invalid element id is used: + + var m = Mesh() + m.element(-1) // Causes 'MshInvldId' + +## MshCnnMtxArgs +[tagmshcnnmtxargs]: # (mshcnnmtxargs) + +This error occurs when connectivitymatrix receives invalid arguments. It expects integer arguments: + + var m = Mesh() + m.connectivitymatrix("invalid") // Causes 'MshCnnMtxArgs' + +## MshAddGrdArgs +[tagmshaddgrdargs]: # (mshaddgrdargs) + +This error occurs when addgrade receives invalid arguments. It expects either an integer grade and optionally a sparse connectivity matrix: + + var m = Mesh() + m.addgrade("invalid") // Causes 'MshAddGrdArgs' + +## MshAddGrdOutOfBnds +[tagmshaddgrdoutofbnds]: # (mshaddgrdoutofbnds) + +This error occurs when attempting to add elements of a grade that exceeds the mesh's maximum grade: + + var m = Mesh() + m.addgrade(10) // Causes 'MshAddGrdOutOfBnds' if max grade is lower + +## MshAddSymArgs +[tagmshaddsymargs]: # (mshaddsymargs) + +This error occurs when addsymmetry receives invalid arguments. It expects an object that provides a transform method and optionally a selection: + + var m = Mesh() + m.addsymmetry("invalid") // Causes 'MshAddSymArgs' + +## MshAddSymMsngTrnsfrm +[tagmshaddsymmsngtrnsfrm]: # (mshaddsymmsngtrnsfrm) + +This error occurs when addsymmetry receives an object that doesn't provide a transform method: + + var m = Mesh() + var obj = Object() + m.addsymmetry(obj) // Causes 'MshAddSymMsngTrnsfrm' + +## SlNoMsh +[tagslnomsh]: # (slnomsh) + +This error occurs when a Selection operation requires a Mesh object but doesn't receive one: + + var s = Selection("invalid") // Causes 'SlNoMsh' + +## SlIsSlArg +[tagslisslarg]: # (slisslarg) + +This error occurs when Selection.isselected receives invalid arguments. It requires a grade and element id: + + var s = Selection(mesh) + s.isselected(1) // Causes 'SlIsSlArg' (missing element id) + +## SlGrdArg +[tagslgrdarg]: # (slgrdarg) + +This error occurs when a Selection method requires a grade as an argument but doesn't receive one: + + var s = Selection(mesh) + s.method() // Causes 'SlGrdArg' if grade required + +## SlStArg +[tagslstarg]: # (slstarg) + +This error occurs when Selection set methods receive invalid arguments. They require a selection: + + var s = Selection(mesh) + s.union("invalid") // Causes 'SlStArg' + +## SlBnd +[tagslbnd]: # (slbnd) + +This error occurs when a mesh has no boundary elements: + + var m = Mesh() + m.boundary() // Causes 'SlBnd' if no boundary exists + +## FldMshArg +[tagfldmsharg]: # (fldmsharg) + +This error occurs when Field receives invalid arguments. It expects a mesh as its first argument: + + var f = Field("invalid") // Causes 'FldMshArg' + +## FldArgs +[tagfldargs]: # (fldargs) + +This error occurs when Field receives invalid optional arguments. It allows 'grade' as an optional argument. + +## FldBnds +[tagfldbnds]: # (fldbnds) + +This error occurs when a Field index is out of bounds: + + var f = Field(mesh) + f[100, 100, 100] // Causes 'FldBnds' if out of bounds + +## FldInvldIndx +[tagfldinvldindx]: # (fldinvldindx) + +This error occurs when Field indices are not numerical: + + var f = Field(mesh) + f["x", "y", "z"] // Causes 'FldInvldIndx' + +## FldInvldArg +[tagfldinvldarg]: # (fldinvldarg) + +This error occurs when Field arithmetic methods receive invalid arguments. They expect a field or number: + + var f = Field(mesh) + f + "string" // Causes 'FldInvldArg' + +## FldIncmptbl +[tagfldincmptbl]: # (fldincmptbl) + +This error occurs when fields have incompatible shapes: + + var f1 = Field(mesh1) + var f2 = Field(mesh2) + f1 + f2 // Causes 'FldIncmptbl' if shapes incompatible + +## FldIncmptblVal +[tagfldincmptblval]: # (fldincmptblval) + +This error occurs when an assignment value has an incompatible shape with field elements: + + var f = Field(mesh) + f[0, 0, 0] = Matrix([[1,2,3,4]]) // Causes 'FldIncmptblVal' if shape doesn't match + +## FldOp +[tagfldop]: # (fldop) + +This error occurs when Field.op receives invalid arguments. It requires a callable object as the first argument and fields of compatible shape as other arguments: + + var f = Field(mesh) + f.op("not callable", f) // Causes 'FldOp' + +## FldOpFn +[tagfldopfn]: # (fldopfn) + +This error occurs when Field.op cannot construct a Field from the return value of the function: + + var f = Field(mesh) + f.op(fn(x) { return "invalid" }, f) // Causes 'FldOpFn' + +## FnSpcArgs +[tagfnspcargs]: # (fnspcargs) + +This error occurs when a FunctionSpace is created with invalid arguments. It must be initialized with a label and a grade: + + FunctionSpace("invalid") // Causes 'FnSpcArgs' + +## FnSpcNtFnd +[tagfnspcntfnd]: # (fnspcntfnd) + +This error occurs when a function space cannot be found: + + FunctionSpace.find("nonexistent", 1) // Causes 'FnSpcNtFnd' + +## FnctlIntMsh +[tagfnctlintmsh]: # (fnctlintmsh) + +This error occurs when a functional's integrand method requires a mesh as an argument but doesn't receive one: + + var func = Length() + func.integrand() // Causes 'FnctlIntMsh' + +## FnctlELNtFnd +[tagfnctleltfnd]: # (fnctleltfnd) + +This error occurs when a mesh doesn't provide elements of the required grade: + + var func = Length() + func.integrand(mesh) // Causes 'FnctlELNtFnd' if mesh lacks required grade + +## FnctlArgs +[tagfnctlargs]: # (fnctlargs) + +This error occurs when invalid arguments are passed to a functional method. + +## VolEnclZero +[tagvolenclzero]: # (volenclzero) + +This error occurs when VolumeEnclosed detects an element of zero size. Check that a mesh point is not coincident with the origin: + + var func = VolumeEnclosed() + func.total(mesh) // Causes 'VolEnclZero' if element has zero size + +## LnElstctyRef +[taglnelstctyref]: # (lnelstctyref) + +This error occurs when LinearElasticity requires a mesh as an argument but doesn't receive one: + + var func = LinearElasticity() + func.total() // Causes 'LnElstctyRef' + +## LnElstctyPrp +[taglnelstctyprp]: # (lnelstctyprp) + +This error occurs when LinearElasticity is missing required properties. It requires 'reference' to be a mesh, 'grade' to be an integer, and 'poissonratio' to be a number: + + var func = LinearElasticity() + func.reference = "invalid" // Causes 'LnElstctyPrp' + +## HydrglArgs +[taghydrglargs]: # (hydrglargs) + +This error occurs when Hydrogel receives invalid arguments. It requires a reference mesh and allows 'grade', 'a', 'b', 'c', 'd', 'phi0', and 'phiref' as optional arguments. + +## HydrglPrp +[taghydrglprp]: # (hydrglprp) + +This error occurs when Hydrogel is missing required properties. It requires the first argument to be a mesh, 'grade' to be an integer, 'a', 'b', 'c', 'd', 'phiref' to be numbers, and 'phi0' to be a number or Field. + +## HydrglFldGrd +[taghydrglfldgrd]: # (hydrglfldgrd) + +This error occurs when Hydrogel is given phi0 as a Field that lacks scalar elements in the required grade. + +## HydrglZrRfVl +[taghydrglzrrfvl]: # (hydrglzrrfvl) + +This error occurs when a Hydrogel reference element has a tiny volume. This is a warning. + +## HydrglBnds +[taghydrglbnds]: # (hydrglbnds) + +This error occurs when phi is outside bounds in a Hydrogel calculation. This is a warning. + +## EquiElArgs +[tagequielargs]: # (equielargs) + +This error occurs when EquiElement receives invalid arguments. It allows 'grade' and 'weight' as optional arguments. + +## GradSqArgs +[taggradsqargs]: # (gradsqargs) + +This error occurs when GradSq receives invalid arguments. It requires a field as the argument: + + var func = GradSq() + func.total("invalid") // Causes 'GradSqArgs' + +## NmtcArgs +[tagnmtcargs]: # (nmtcargs) + +This error occurs when Nematic receives invalid arguments. It requires a field as the argument: + + var func = Nematic() + func.total("invalid") // Causes 'NmtcArgs' + +## NmtcElArgs +[tagnmtcelargs]: # (nmtcelargs) + +This error occurs when NematicElectric receives invalid arguments. It requires the director and electric field or potential as arguments (in that order). + +## SclrPtFnCllbl +[tagsclrptfncllbl]: # (sclrptfncllbl) + +This error occurs when a ScalarPotential function is not callable: + + var func = ScalarPotential() + func.function = "invalid" // Causes 'SclrPtFnCllbl' + +## IntgrlArgs +[tagintgrlargs]: # (intgrlargs) + +This error occurs when an Integral functional receives invalid arguments. It requires a callable argument followed by zero or more Fields: + + var func = LineIntegral() + func.total("invalid") // Causes 'IntgrlArgs' + +## IntgrlMthdDct +[tagintgrlmthddct]: # (intgrlmthddct) + +This error occurs when an Integral's method argument is not a Dictionary containing configuration settings: + + var func = LineIntegral() + func.method = "invalid" // Causes 'IntgrlMthdDct' + +## IntgrlFld +[tagintgrlfld]: # (intgrlfld) + +This error occurs when an Integral cannot identify a field: + + var func = LineIntegral() + func.total(fn(x) { return x }, "invalid") // Causes 'IntgrlFld' + +## IntgrlGrdEvl +[tagintgrlgrdevl]: # (intgrlgrdevl) + +This error occurs when gradient evaluation fails in an Integral: + + var func = LineIntegral() + func.gradient(mesh) // Causes 'IntgrlGrdEvl' if evaluation fails + +## IntgrlAmbgsFld +[tagintgrlambgsfld]: # (intgrlambgsfld) + +This error occurs when a field reference is ambiguous in an Integral. Call with a Field object: + + var func = LineIntegral() + func.total(fn(x) { return x }) // Causes 'IntgrlAmbgsFld' if ambiguous + +## IntgrlNFlds +[tagintgrlnflds]: # (intgrlnflds) + +This error occurs when an incorrect number of Fields is provided for an integrand function: + + var func = LineIntegral() + func.total(fn(x, y) { return x + y }, field1) // Causes 'IntgrlNFlds' if wrong number + +## IntgrlSpclFn +[tagintgrlspclfn]: # (intgrlspclfn) + +This error occurs when a special function is called outside of an Integral: + + tangent() // Causes 'IntgrlSpclFn' (must be called within integrand) + +## IntgrtrSbdvns +[tagintgrtrsbdvns]: # (intgrtrsbdvns) + +This error occurs when too many subdivisions are needed in evaluating an integral, possibly indicating a singularity: + + // Occurs during numerical integration when subdivision limit is exceeded + +## IntgrtrRlNtFnd +[tagintgrtrrlntfnd]: # (intgrtrrlntfnd) + +This error occurs when an integrator quadrature rule cannot be found: + + var method = {"rule": "nonexistent"} + // Causes 'IntgrtrRlNtFnd' when rule doesn't exist + +## IntgrtrRlUnavlb +[tagintgrtrrlunavlb]: # (intgrtrrlunavlb) + +This error occurs when no quadrature rule is available that matches the provided integrator method dictionary: + + var method = {"rule": "invalid", "degree": 100} + // Causes 'IntgrtrRlUnavlb' if no matching rule + +## IntgrtrMthdTyp +[tagintgrtrmthdtyp]: # (intgrtrmthdtyp) + +This error occurs when an integrator method dictionary option has the wrong type: + + var method = {"rule": 123} // Causes 'IntgrtrMthdTyp' if rule must be string + +## DbgSymbl +[tagdbgsymbl]: # (dbgsymbl) + +This error occurs in the debugger when a symbol cannot be found in the current context: + + // Occurs when debugging and accessing a symbol that doesn't exist + +## DbgSymblPrpty +[tagdbgsymblprpty]: # (dbgsymblprpty) + +This error occurs in the debugger when a symbol lacks a requested property: + + // Occurs when debugging and accessing a property that doesn't exist + +## DbgInvldRg +[tagdbginvldrg]: # (dbginvldrg) + +This error occurs in the debugger when an invalid register is accessed: + + // Occurs when debugging and accessing an invalid register + +## DbgInvldGlbl +[tagdbginvldglbl]: # (dbginvldglbl) + +This error occurs in the debugger when an invalid global is accessed: + + // Occurs when debugging and accessing an invalid global + +## DbgInvldInstr +[tagdbginvldinstr]: # (dbginvldinstr) + +This error occurs in the debugger when an invalid instruction is encountered: + + // Occurs when debugging and encountering an invalid instruction + +## DbgRgObj +[tagdbgrgobj]: # (dbgrgobj) + +This error occurs in the debugger when a register doesn't contain an object: + + // Occurs when debugging and expecting an object in a register + +## DbgStPrp +[tagdbgstprp]: # (dbgstprp) + +This error occurs in the debugger when attempting to set a property on an object that doesn't support it: + + // Occurs when debugging and trying to set a property From 8f3e88557d9234fb8643f44c60a16d5f3f059d58 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 08:18:48 -0500 Subject: [PATCH 127/156] Platform independent re-entrant qsort --- help/errors.md | 20 ++++++++++++------ src/classes/list.c | 48 +++++++++++++++++++++++++----------------- src/classes/list.h | 1 + src/support/platform.c | 37 ++++++++++++++++++++++++++++++++ src/support/platform.h | 9 ++++++++ 5 files changed, 90 insertions(+), 25 deletions(-) diff --git a/help/errors.md b/help/errors.md index 133b412e..8d7ce5e1 100644 --- a/help/errors.md +++ b/help/errors.md @@ -25,6 +25,14 @@ You can also use the `warning` method to alert the user of a potential issue tha myerr.warning() +To see the full list of morpho errors, look at the `errorlist` help entry. + +# Error list +[tagerrorrlist]: # (error list) +[tagerrorlist]: # (errorlist) + +A list of morpho errors: + [showsubtopics]: # (subtopics) ## Alloc @@ -225,8 +233,8 @@ This error occurs when multiple dispatch cannot find a method implementation tha class A { } class B { } - fn method(a: A) { } - fn method(b: B) { } + fn method(A a) { } + fn method(B b) { } method(1) // Causes 'MltplDsptchFld' - no matching method for integer ## TypeChk @@ -234,7 +242,7 @@ This error occurs when multiple dispatch cannot find a method implementation tha This error occurs when there is a type violation, such as attempting to assign a value of one type to a variable declared with a different type: - var x: String = 5 // Causes 'TypeChk' + String x = 5 // Causes 'TypeChk' ## NoOptArg [tagnooptarg]: # (nooptarg) @@ -242,15 +250,15 @@ This error occurs when there is a type violation, such as attempting to assign a This error occurs when you try to pass optional arguments to a function that doesn't accept them: fn f(x) { return x } - f(1, y: 2) // Causes 'NoOptArg' + f(1, y=2) // Causes 'NoOptArg' ## UnkwnOptArg [tagunkwnoptarg]: # (unkwnoptarg) This error occurs when you pass an unknown optional argument to a function: - fn f(x, y: 1) { return x + y } - f(1, z: 2) // Causes 'UnkwnOptArg' + fn f(x, y=1) { return x + y } + f(1, z=2) // Causes 'UnkwnOptArg' ## InvldArgsBltn [taginvldargsbltn]: # (invldargsbltn) diff --git a/src/classes/list.c b/src/classes/list.c index e5558eaf..354764b0 100644 --- a/src/classes/list.c +++ b/src/classes/list.c @@ -130,35 +130,45 @@ int list_sortfunction(const void *a, const void *b) { } /** Sort the contents of a list */ -void list_sort(objectlist *list) { - qsort(list->val.data, list->val.count, sizeof(value), list_sortfunction); +void list_sortcontents(value *values, size_t count) { + qsort(values, count, sizeof(value), list_sortfunction); } -static vm *list_sortwithfn_vm; -static value list_sortwithfn_fn; -static bool list_sortwithfn_err; - -/** Sort function for list_sort */ -int list_sortfunctionwfn(const void *a, const void *b) { - value args[2] = {*(value *) a, *(value *) b}; - value ret; +/** Sort the contents of a list */ +void list_sort(objectlist *list) { + list_sortcontents(list->val.data, list->val.count); +} - if (morpho_call(list_sortwithfn_vm, list_sortwithfn_fn, 2, args, &ret)) { +/** Sort the contents of a list using a re-entrant comparison function */ +typedef struct { + vm *v; + value cmpfn; + bool errq; +} _sortfninfo; + +static int _sortfn(const void *a, const void *b, void *context) { + _sortfninfo *info = (_sortfninfo *) context; + value ret, args[2] = {*(value *) a, *(value *) b}; + + if (morpho_call(info->v, info->cmpfn, 2, args, &ret)) { if (MORPHO_ISINTEGER(ret)) return MORPHO_GETINTEGERVALUE(ret); if (MORPHO_ISFLOAT(ret)) return morpho_comparevalue(MORPHO_FLOAT(0), ret); } - - list_sortwithfn_err=true; + + info->errq=true; return 0; } +/** Sort a list of values */ +bool list_sortcontentswithfn(vm *v, value cmpfn, value *values, size_t count) { + _sortfninfo info = { .v = v, .cmpfn = cmpfn, .errq=false }; + platform_qsort_r(values, count, sizeof(value), &info, _sortfn); + return !info.errq; +} + /** Sort the contents of a list */ -bool list_sortwithfn(vm *v, value fn, objectlist *list) { - list_sortwithfn_vm=v; - list_sortwithfn_fn=fn; - list_sortwithfn_err=false; - qsort(list->val.data, list->val.count, sizeof(value), list_sortfunctionwfn); - return !list_sortwithfn_err; +bool list_sortwithfn(vm *v, value cmpfn, objectlist *list) { + return list_sortcontentswithfn(v, cmpfn, list->val.data, list->val.count); } /** Sort function for list_order */ diff --git a/src/classes/list.h b/src/classes/list.h index ba7feb88..56342480 100644 --- a/src/classes/list.h +++ b/src/classes/list.h @@ -77,6 +77,7 @@ bool list_resize(objectlist *list, int size); void list_append(objectlist *list, value v); unsigned int list_length(objectlist *list); bool list_getelement(objectlist *list, int i, value *out); +void list_sortcontents(value *values, size_t count); void list_sort(objectlist *list); objectlist *list_clone(objectlist *list); diff --git a/src/support/platform.c b/src/support/platform.c index 6aef4747..35556abf 100644 --- a/src/support/platform.c +++ b/src/support/platform.c @@ -51,6 +51,43 @@ const char *platform_name(void) { return NULL; // Unrecognized platform } +/* ********************************************************************** + * Re-entrant qsort + * ********************************************************************** */ + +typedef struct _sadapt { + void *context; + platform_qsort_r_comparefn cmp; +} _adaptinfo; + +/** Adapter function to patch macOS, BSD and windows variants of qsort_r */ +static int _comparefn_adapter(void *in, const void *a, const void *b) { + _adaptinfo *info = (_adaptinfo *) in; + return info->cmp(a,b,info->context); +} + +/** Fallback function for use with regular qsort @warning not thread-safe */ +static _adaptinfo _globalinfo; +static int _comparefn_fallback(const void *a, const void *b) { + return _globalinfo.cmp(a,b,_globalinfo.context); +} + +/** Platform independent re-entrant qsort function */ +void platform_qsort_r(void *base, size_t nel, size_t width, void *context, platform_qsort_r_comparefn cmp) { +#if defined(__GLIBC__) || defined(__FreeBSD__) || defined(__OpenBSD__) || defined(__NetBSD__) + qsort_r(base, nel, width, cmp, context); +#elif defined(__APPLE__) + _adaptinfo info = { .context = context, .cmp = cmp }; + qsort_r(base, nel, width, &info, _comparefn_adapter); +#elif defined(_WIN32) + _adaptinfo info = { .context = context, .cmp = cmp }; + qsort_s(base, nel, width, _comparefn_adapter, &info); +#else + _globalinfo.cmp = cmp; _globalinfo.context = context; + qsort(base, nel, width, _comparefn_fallback); +#endif +} + /* ********************************************************************** * Random numbers * ********************************************************************** */ diff --git a/src/support/platform.h b/src/support/platform.h index 2d07d90c..bf56ab19 100644 --- a/src/support/platform.h +++ b/src/support/platform.h @@ -30,6 +30,15 @@ const char *platform_name(void); +/* ------------------------------------------------------- + * Re-entrant qsort + * ------------------------------------------------------- */ + +typedef int (*platform_qsort_r_comparefn)(const void *, const void *, void *); + +/** Sort elements with additional context passed to the comparator function */ +void platform_qsort_r(void *base, size_t nel, size_t width, void *context, platform_qsort_r_comparefn cmp); + /* ------------------------------------------------------- * Random numbers * ------------------------------------------------------- */ From 34b9650cbc47c3bfd201635fc7eb24a1da9a1743 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 08:34:22 -0500 Subject: [PATCH 128/156] Tuple sort functions --- src/classes/list.c | 15 --------------- src/classes/list.h | 3 +++ src/classes/tuple.c | 29 +++++++++++++++++++++++++++++ test/tuple/tuple_sort.morpho | 10 ++++++++++ test/tuple/tuple_sort_fn.morpho | 14 ++++++++++++++ 5 files changed, 56 insertions(+), 15 deletions(-) create mode 100644 test/tuple/tuple_sort.morpho create mode 100644 test/tuple/tuple_sort_fn.morpho diff --git a/src/classes/list.c b/src/classes/list.c index 354764b0..5569e0a5 100644 --- a/src/classes/list.c +++ b/src/classes/list.c @@ -622,21 +622,6 @@ value List_roll(vm *v, int nargs, value *args) { return out; } -/** Sorts a list */ -value XList_sort(vm *v, int nargs, value *args) { - objectlist *slf = MORPHO_GETLIST(MORPHO_SELF(args)); - - if (nargs==0) { - list_sort(slf); - } else if (nargs==1 && MORPHO_ISCALLABLE(MORPHO_GETARG(args, 0))) { - if (!list_sortwithfn(v, MORPHO_GETARG(args, 0), slf)) { - morpho_runtimeerror(v, LIST_SRTFN); - } - } - - return MORPHO_NIL; -} - /** Sorts a list */ value List_sort(vm *v, int nargs, value *args) { list_sort(MORPHO_GETLIST(MORPHO_SELF(args))); diff --git a/src/classes/list.h b/src/classes/list.h index 56342480..f0b0a521 100644 --- a/src/classes/list.h +++ b/src/classes/list.h @@ -79,6 +79,9 @@ unsigned int list_length(objectlist *list); bool list_getelement(objectlist *list, int i, value *out); void list_sortcontents(value *values, size_t count); void list_sort(objectlist *list); +bool list_sortcontentswithfn(vm *v, value cmpfn, value *values, size_t count); +bool list_sortwithfn(vm *v, value cmpfn, objectlist *list); + objectlist *list_clone(objectlist *list); void list_initialize(void); diff --git a/src/classes/tuple.c b/src/classes/tuple.c index a73ec2d2..dd256f56 100644 --- a/src/classes/tuple.c +++ b/src/classes/tuple.c @@ -257,6 +257,33 @@ value Tuple_join(vm *v, int nargs, value *args) { return out; } +/** Sorts the contents of a tuple, returning a new tuple */ +value Tuple_sort(vm *v, int nargs, value *args) { + objecttuple *src = MORPHO_GETTUPLE(MORPHO_SELF(args)); + + objecttuple *new = object_newtuple(src->length, src->tuple); + if (new) list_sortcontents(new->tuple, new->length); + + return morpho_wrapandbind(v, (object *) new); +} + +/** Sorts the contents of a tuple using a comparison function, returning a new tuple */ +value Tuple_sort_fn(vm *v, int nargs, value *args) { + objecttuple *src = MORPHO_GETTUPLE(MORPHO_SELF(args)); + + objecttuple *new=object_newtuple(src->length, src->tuple); + if (new) { + bool success=list_sortcontentswithfn(v, MORPHO_GETARG(args, 0), new->tuple, new->length); + if (!success) { + morpho_runtimeerror(v, LIST_SRTFN); + object_free((object *) new); + return MORPHO_NIL; + } + } + + return morpho_wrapandbind(v, (object *) new); +} + /** Tests if a tuple has a value as a member */ value Tuple_ismember(vm *v, int nargs, value *args) { objecttuple *slf = MORPHO_GETTUPLE(MORPHO_SELF(args)); @@ -276,6 +303,8 @@ MORPHO_METHOD(MORPHO_GETINDEX_METHOD, Tuple_getindex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD(MORPHO_SETINDEX_METHOD, Tuple_setindex, BUILTIN_FLAGSEMPTY), MORPHO_METHOD(MORPHO_ENUMERATE_METHOD, Tuple_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_JOIN_METHOD, "Tuple (_)", Tuple_join, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(LIST_SORT_METHOD, "Tuple ()", Tuple_sort, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(LIST_SORT_METHOD, "Tuple (_)", Tuple_sort_fn, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(LIST_ISMEMBER_METHOD, "Bool (_)", Tuple_ismember, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_CONTAINS_METHOD, "Bool (_)", Tuple_ismember, BUILTIN_FLAGSEMPTY) MORPHO_ENDCLASS diff --git a/test/tuple/tuple_sort.morpho b/test/tuple/tuple_sort.morpho new file mode 100644 index 00000000..907bc1fd --- /dev/null +++ b/test/tuple/tuple_sort.morpho @@ -0,0 +1,10 @@ +// Tuple sort + +var a = ( 4, 3, 2, 7, 8, 1, 10, 9, 6, 5 ) +var b = a.sort() + +print b +// expect: (1, 2, 3, 4, 5, 6, 7, 8, 9, 10) + +print a==b +// expect: false diff --git a/test/tuple/tuple_sort_fn.morpho b/test/tuple/tuple_sort_fn.morpho new file mode 100644 index 00000000..537a8d26 --- /dev/null +++ b/test/tuple/tuple_sort_fn.morpho @@ -0,0 +1,14 @@ +// Tuple sort with comparison function + +fn cmp(a, b) { + return -(a-b) +} + +var a = ( 4, 3, 2, 7, 8, 1, 10, 9, 6, 5 ) +var b = a.sort(cmp) + +print b +// expect: (10, 9, 8, 7, 6, 5, 4, 3, 2, 1) + +print a==b +// expect: false From df0f3225ca0e259c9c6563d5ad37fb725e8d2ffa Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 08:38:51 -0500 Subject: [PATCH 129/156] Remove extraneous spaces --- test/tuple/tuple_sort.morpho | 2 +- test/tuple/tuple_sort_fn.morpho | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/test/tuple/tuple_sort.morpho b/test/tuple/tuple_sort.morpho index 907bc1fd..9757d05e 100644 --- a/test/tuple/tuple_sort.morpho +++ b/test/tuple/tuple_sort.morpho @@ -7,4 +7,4 @@ print b // expect: (1, 2, 3, 4, 5, 6, 7, 8, 9, 10) print a==b -// expect: false +// expect: false diff --git a/test/tuple/tuple_sort_fn.morpho b/test/tuple/tuple_sort_fn.morpho index 537a8d26..555a35ff 100644 --- a/test/tuple/tuple_sort_fn.morpho +++ b/test/tuple/tuple_sort_fn.morpho @@ -11,4 +11,4 @@ print b // expect: (10, 9, 8, 7, 6, 5, 4, 3, 2, 1) print a==b -// expect: false +// expect: false From 4d48f7f4a703aedb7a73783e38a8423d27fe20f3 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 09:37:52 -0500 Subject: [PATCH 130/156] Add non-camelcase method name for Matrix.setColumn --- src/linalg/matrix.c | 1 + src/linalg/matrix.h | 1 + 2 files changed, 2 insertions(+) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index c796c37c..f0d197dd 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1488,6 +1488,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex__ MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex__x_x_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn__int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn__int_matrix, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD_DEPRECATED, "(Int, Matrix)", Matrix_setcolumn__int_matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Matrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add__nil, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add__x, BUILTIN_FLAGSEMPTY), diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 65ebc1b0..10c9cb1c 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -172,6 +172,7 @@ matrixinterfacedefn *matrix_getinterface(objectmatrix *a); #define MATRIX_OUTER_METHOD "outer" #define MATRIX_RESHAPE_METHOD "reshape" #define MATRIX_ROLL_METHOD "roll" +#define MATRIX_SETCOLUMN_METHOD_DEPRECATED "setcolumn" #define MATRIX_SETCOLUMN_METHOD "setColumn" #define MATRIX_TRACE_METHOD "trace" #define MATRIX_TRANSPOSE_METHOD "transpose" From 0dac41d72a2cd905eefed656790090d1985b7342 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 10:32:58 -0500 Subject: [PATCH 131/156] Fix return type check in sparsedok_copymatrixat --- src/linalg/matrix.c | 9 +++++++++ src/linalg/sparse.c | 6 +++--- test/sparse/concatenate.morpho | 2 +- test/sparse/incompatible_add.morpho | 2 +- test/sparse/incompatible_mul.morpho | 2 +- test/sparse/sparse_dense_mul.morpho | 2 +- test/sparse/sparse_dense_mul_dimensions.morpho | 4 ++-- 7 files changed, 18 insertions(+), 9 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index f0d197dd..b11cfb8e 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -780,6 +780,14 @@ value matrix_constructor__array(vm *v, int nargs, value *args) { return morpho_wrapandbind(v, (object *) new); } +/** Constructs a matrix from a sparse matrix */ +value matrix_constructor__sparse(vm *v, int nargs, value *args) { + objectmatrix *new = NULL; + objectsparseerror err=sparse_tomatrix(MORPHO_GETSPARSE(MORPHO_GETARG(args, 0)), &new); + if (err!=SPARSE_OK) morpho_runtimeerror(v, LINALG_INVLDARGS); + return morpho_wrapandbind(v, (object *) new); +} + value matrix_constructor__err(vm *v, int nargs, value *args) { morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); return MORPHO_NIL; @@ -1544,6 +1552,7 @@ void matrix_initialize(void) { morpho_addfunction(MATRIX_CLASSNAME, "Matrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); + //morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Sparse)", matrix_constructor__sparse, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/src/linalg/sparse.c b/src/linalg/sparse.c index 0157363e..7047aa7b 100644 --- a/src/linalg/sparse.c +++ b/src/linalg/sparse.c @@ -270,7 +270,7 @@ bool sparsedok_copymatrixat(objectmatrix *src, sparsedok *dest, int row0, int co double val; for (int j=0; jncols; j++) { for (int i=0; inrows; i++) { - if (!(matrix_getelement(src, i, j, &val) && + if (!(matrix_getelement(src, i, j, &val)==LINALGERR_OK && sparsedok_insert(dest, i+row0, j+col0, MORPHO_FLOAT(val)))) return false; } } @@ -1813,14 +1813,14 @@ void sparse_initialize(void) { objectdokkeytype=object_addtype(&objectdokkeydefn); objectsparsetype=object_addtype(&objectsparsedefn); - builtin_addfunction(SPARSE_CLASSNAME, sparse_constructor, MORPHO_FN_CONSTRUCTOR); - objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); value sparseclass=builtin_addclass(SPARSE_CLASSNAME, MORPHO_GETCLASSDEFINITION(Sparse), objclass); object_setveneerclass(OBJECT_SPARSE, sparseclass); + builtin_addfunction(SPARSE_CLASSNAME, sparse_constructor, MORPHO_FN_CONSTRUCTOR); + morpho_defineerror(SPARSE_CONSTRUCTOR, ERROR_HALT, SPARSE_CONSTRUCTOR_MSG); morpho_defineerror(SPARSE_SETFAILED, ERROR_HALT, SPARSE_SETFAILED_MSG); morpho_defineerror(SPARSE_INVLDARRAYINIT, ERROR_HALT, SPARSE_INVLDARRAYINIT_MSG); diff --git a/test/sparse/concatenate.morpho b/test/sparse/concatenate.morpho index 9ea35027..063af577 100644 --- a/test/sparse/concatenate.morpho +++ b/test/sparse/concatenate.morpho @@ -24,4 +24,4 @@ print c // expect: [ 2 3 2 3 0 ] var c = Sparse([[a, b], [b, 0]]) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/sparse/incompatible_add.morpho b/test/sparse/incompatible_add.morpho index 5e85bd39..8cbcb014 100644 --- a/test/sparse/incompatible_add.morpho +++ b/test/sparse/incompatible_add.morpho @@ -4,4 +4,4 @@ var a = Sparse([[0,0,1],[1,1,1],[1,2,-1],[2,1,-1],[2,2,1],[3,3,1]]) var b = Sparse([[0,1,1],[1,0,1]]) print a+b -// expect Error: 'MtrxIncmptbl' +// expect Error: 'LnAlgMtrxIncmptbl' diff --git a/test/sparse/incompatible_mul.morpho b/test/sparse/incompatible_mul.morpho index 50750282..c6b4437c 100644 --- a/test/sparse/incompatible_mul.morpho +++ b/test/sparse/incompatible_mul.morpho @@ -4,4 +4,4 @@ var a = Sparse([[0,0,1],[1,1,1],[1,2,-1],[2,1,-1],[2,2,1],[3,3,1]]) var b = Sparse([[0,1,1],[1,0,1]]) print a*b -// expect Error: 'MtrxIncmptbl' +// expect Error: 'LnAlgMtrxIncmptbl' diff --git a/test/sparse/sparse_dense_mul.morpho b/test/sparse/sparse_dense_mul.morpho index 3c4c2abb..6e086085 100644 --- a/test/sparse/sparse_dense_mul.morpho +++ b/test/sparse/sparse_dense_mul.morpho @@ -13,4 +13,4 @@ print A*B.transpose() // expect: [ 8 16 ] print A*B -// expect error 'MtrxIncmptbl' \ No newline at end of file +// expect error 'LnAlgMtrxIncmptbl' \ No newline at end of file diff --git a/test/sparse/sparse_dense_mul_dimensions.morpho b/test/sparse/sparse_dense_mul_dimensions.morpho index 19471eae..af985fd8 100644 --- a/test/sparse/sparse_dense_mul_dimensions.morpho +++ b/test/sparse/sparse_dense_mul_dimensions.morpho @@ -11,9 +11,9 @@ for (i in 0...N) { var b = Matrix(List(1..N)) print A.dimensions() // expect: [ 6, 3 ] -print b.dimensions() // expect: [ 3, 1 ] +print b.dimensions() // expect: (3, 1) -print (A*b).dimensions() // expect: [ 6, 1 ] +print (A*b).dimensions() // expect: (6, 1) print A*b // expect: [ 1 ] From bd94b313c4ea692faa52b99100d654a98c154776 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 10:48:08 -0500 Subject: [PATCH 132/156] Fix field initialization to match new matrix type --- src/geometry/field.c | 2 ++ 1 file changed, 2 insertions(+) diff --git a/src/geometry/field.c b/src/geometry/field.c index 32bd5b26..cb4699a0 100644 --- a/src/geometry/field.c +++ b/src/geometry/field.c @@ -153,6 +153,8 @@ objectfield *object_newfield(objectmesh *mesh, value prototype, value fnspc, uns object_init(&new->data.obj, OBJECT_MATRIX); new->data.ncols=1; new->data.nrows=size; + new->data.nvals=1; + new->data.nels=new->data.ncols*new->data.nrows*new->data.nvals; new->data.elements=new->data.matrixdata; if (MORPHO_ISMATRIX(prototype)) { From 0e591d1361157a8d161c1e204f2413ae97c01225 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 19:54:49 -0500 Subject: [PATCH 133/156] Fix test for zero in eigenvalue creation --- src/linalg/matrix.c | 3 ++- test/matrix/eigenvalues.morpho | 4 ++-- 2 files changed, 4 insertions(+), 3 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index b11cfb8e..22592896 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1179,7 +1179,8 @@ static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *o value ev[n]; for (int i=0; i DBL_MIN ? fabs(cimag(w[i]))/abs <= MORPHO_EPS : fabs(cimag(w[i])) < DBL_MIN) { ev[i]=MORPHO_FLOAT(creal(w[i])); } else { objectcomplex *new = object_newcomplex(creal(w[i]), cimag(w[i])); diff --git a/test/matrix/eigenvalues.morpho b/test/matrix/eigenvalues.morpho index 562f3d62..7fa8407c 100644 --- a/test/matrix/eigenvalues.morpho +++ b/test/matrix/eigenvalues.morpho @@ -5,7 +5,7 @@ var a = Matrix([[1,-1,0], [-1,1,0], [0,0,1]]) var ev = a.eigenvalues() ev.sort() print ev -// expect: [ 0, 1, 2 ] +// expect: (0, 1, 2) var b = Matrix([[1,2,0], [-2,1,0], [0,0,1]]) @@ -22,7 +22,7 @@ print a // ensure a is not overwritten var es = a.eigensystem() print es[0] -// expect: [ 2, 0, 1 ] +// expect: (2, 0, 1) print es[1] // expect: [ 0.707107 0.707107 0 ] // expect: [ -0.707107 0.707107 0 ] From e2d36688f87bbc2fc6c7b91de536494c50501337 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 20:39:08 -0500 Subject: [PATCH 134/156] Add delayed signature parsing --- src/builtin/builtin.c | 50 +++++++++++++++++++++++++++++----- src/builtin/builtin.h | 3 ++ src/core/vm.c | 2 +- src/datastructures/signature.c | 4 +-- src/datastructures/signature.h | 2 +- src/linalg/matrix.c | 2 +- src/linalg/sparse.c | 2 +- src/support/extensions.c | 1 + 8 files changed, 53 insertions(+), 13 deletions(-) diff --git a/src/builtin/builtin.c b/src/builtin/builtin.c index 705b3f8c..313bc940 100644 --- a/src/builtin/builtin.c +++ b/src/builtin/builtin.c @@ -162,6 +162,39 @@ objecttypedefn objectbuiltinfunctiondefn = { .cmpfn=NULL }; +/* ********************************************************************** + * Signature parsing + * ********************************************************************** */ + +/** This mechanism allows builtin classes to cross-reference one another in method signature declarations */ + +typedef struct _sigparses { + const char *sig; + signature *dest; +} _sigparse; + +DECLARE_VARRAY(_sigparse, _sigparse) +DEFINE_VARRAY(_sigparse, _sigparse) + +varray__sigparse sigparseworklist; + +/** Add a signature to be parsed on the next call to builtin_parsesignatures */ +void builtin_addparsesignature(const char *sig, signature *dest) { + _sigparse s = { .sig = sig, .dest = dest }; + varray__sigparsewrite(&sigparseworklist, s); +} + +/** Parses all signatures on the worklist */ +bool builtin_parsesignatures(void) { + _sigparse s; + while (varray__sigparsepop(&sigparseworklist, &s)) { + if (!signature_parse(s.sig, s.dest)) { + return false; + } + } + return true; +} + /* ********************************************************************** * Create and find builtin functions * ********************************************************************** */ @@ -264,10 +297,7 @@ bool morpho_addfunction(char *name, char *signature, builtinfunction func, built if (!name) goto morpho_addfunction_cleanup; // Parse function signature if provided - if (signature && - !signature_parse(signature, &new->sig)) { - UNREACHABLE("Syntax error in signature definition."); - } + if (signature) builtin_addparsesignature(signature, &new->sig); value newfn = MORPHO_OBJECT(new); @@ -340,9 +370,7 @@ bool morpho_addclass(char *name, builtinclassentry desc[], int nparents, value * newmethod->klass=new; newmethod->name=object_stringfromcstring(desc[i].name, strlen(desc[i].name)); newmethod->flags=desc[i].flags; - if (desc[i].signature) { - success &= signature_parse(desc[i].signature, &newmethod->sig); - } + if (desc[i].signature) builtin_addparsesignature(desc[i].signature, &newmethod->sig); dictionary_intern(&builtin_symboltable, newmethod->name); value method = MORPHO_OBJECT(newmethod); @@ -429,6 +457,8 @@ void builtin_initialize(void) { objectclasstype=object_addtype(&objectclassdefn); objectbuiltinfunctiontype=object_addtype(&objectbuiltinfunctiondefn); + varray__sigparseinit(&sigparseworklist); + /* Initialize builtin classes and functions */ instance_initialize(); // Must initialize first so that Object exists @@ -473,6 +503,10 @@ void builtin_initialize(void) { // Initialize geometry geometry_initialize(); #endif + + if (!builtin_parsesignatures()) { + UNREACHABLE("Syntax error in signature."); + } morpho_addfinalizefn(builtin_finalize); } @@ -484,6 +518,8 @@ void builtin_finalize(void) { builtin_objects=next; } + varray__sigparseclear(&sigparseworklist); + dictionary_clear(&builtin_functiontable); dictionary_clear(&builtin_classtable); dictionary_clear(&builtin_symboltable); diff --git a/src/builtin/builtin.h b/src/builtin/builtin.h index c5d0dd49..e9c106fd 100644 --- a/src/builtin/builtin.h +++ b/src/builtin/builtin.h @@ -16,6 +16,9 @@ #include "signature.h" +/** Call to pase method and function signatures */ +bool builtin_parsesignatures(void); + /* ------------------------------------------------------- * Built in function objects * ------------------------------------------------------- */ diff --git a/src/core/vm.c b/src/core/vm.c index 60b98a41..22ae04e5 100644 --- a/src/core/vm.c +++ b/src/core/vm.c @@ -1770,7 +1770,7 @@ value morpho_wrapandbind(vm *v, object *obj) { if (obj) { out=MORPHO_OBJECT(obj); morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); + } else if (!morpho_checkerror(&v->err)) morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return out; } diff --git a/src/datastructures/signature.c b/src/datastructures/signature.c index c83248c0..ca12b020 100644 --- a/src/datastructures/signature.c +++ b/src/datastructures/signature.c @@ -106,7 +106,7 @@ tokendefn sigtokens[] = { }; /** @brief Initializes a lexer for parsing signatures */ -void signature_initializelexer(lexer *l, char *signature) { +void signature_initializelexer(lexer *l, const char *signature) { lex_init(l, signature, 0); lex_settokendefns(l, sigtokens); lex_seteof(l, SIGNATURE_EOF); @@ -178,7 +178,7 @@ bool signature_parsesignature(parser *p, void *out) { } /** Parses a signature */ -bool signature_parse(char *sig, signature *out) { +bool signature_parse(const char *sig, signature *out) { error err; error_init(&err); diff --git a/src/datastructures/signature.h b/src/datastructures/signature.h index 028ca4d1..18ddc650 100644 --- a/src/datastructures/signature.h +++ b/src/datastructures/signature.h @@ -31,7 +31,7 @@ value signature_getreturntype(signature *s); int signature_countparams(signature *s); void signature_set(signature *s, int nparam, value *types); -bool signature_parse(char *sig, signature *out); +bool signature_parse(const char *sig, signature *out); void signature_print(signature *s); diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 22592896..fcdb2d2b 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -1553,7 +1553,7 @@ void matrix_initialize(void) { morpho_addfunction(MATRIX_CLASSNAME, "Matrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); - //morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Sparse)", matrix_constructor__sparse, MORPHO_FN_CONSTRUCTOR, NULL); + morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Sparse)", matrix_constructor__sparse, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); diff --git a/src/linalg/sparse.c b/src/linalg/sparse.c index 7047aa7b..575e850a 100644 --- a/src/linalg/sparse.c +++ b/src/linalg/sparse.c @@ -288,7 +288,7 @@ bool sparsedok_copytomatrix(sparsedok *src, objectmatrix *dest, int row0, int co if (sparsedok_get(src, i, j, &entry)) { double val=0.0; if (!morpho_valuetofloat(entry, &val)) return false; - if (!matrix_setelement(dest, i+row0, j+col0, val)) return false; + if (matrix_setelement(dest, i+row0, j+col0, val)!=LINALGERR_OK) return false; } } diff --git a/src/support/extensions.c b/src/support/extensions.c index ee2d42b5..c6e3a474 100644 --- a/src/support/extensions.c +++ b/src/support/extensions.c @@ -166,6 +166,7 @@ bool extension_load(char *name, dictionary **functiontable, dictionary **classta } else if (extension_initwithname(&e, name, MORPHO_GETCSTRING(path)) && extension_dlopen(&e)) { success=extension_initialize(&e); + success &= builtin_parsesignatures(); if (success) varray_extensionwrite(&extensionlist, e); } From ace41d7aeb3d0aaeadbdade869228fc7b1c9628b Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 20:44:26 -0500 Subject: [PATCH 135/156] Correct erroneous error checks --- src/geometry/mesh.c | 2 +- src/linalg/sparse.c | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/geometry/mesh.c b/src/geometry/mesh.c index 98a075a8..7afb6ad8 100644 --- a/src/geometry/mesh.c +++ b/src/geometry/mesh.c @@ -1001,7 +1001,7 @@ bool mesh_save(objectmesh *m, char *file) { for (unsigned int j=0; jvert->nrows; j++) { double x; - if (matrix_getelement(m->vert, j, i, &x)) { + if (matrix_getelement(m->vert, j, i, &x) == LINALGERR_OK) { fprintf(f, "%g ", x); } } diff --git a/src/linalg/sparse.c b/src/linalg/sparse.c index 575e850a..cbd82517 100644 --- a/src/linalg/sparse.c +++ b/src/linalg/sparse.c @@ -583,7 +583,7 @@ bool sparseccs_copytomatrix(sparseccs *src, objectmatrix *dest, int row0, int co if (!sparseccs_getrowindices(src, i, &nentries, &entries)) return false; for (int j=0; jvalues[k])) return false; + if (matrix_setelement(dest, entries[j]+row0, i+col0, src->values[k]) != LINALGERR_OK) return false; k++; } } From 238625982be891cb8d8c21a7707276c5bbbb3202 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 20:51:27 -0500 Subject: [PATCH 136/156] Correct error in test suite --- test/matrix/eigenvalues.morpho | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/test/matrix/eigenvalues.morpho b/test/matrix/eigenvalues.morpho index 7fa8407c..b874b407 100644 --- a/test/matrix/eigenvalues.morpho +++ b/test/matrix/eigenvalues.morpho @@ -3,8 +3,7 @@ var a = Matrix([[1,-1,0], [-1,1,0], [0,0,1]]) var ev = a.eigenvalues() -ev.sort() -print ev +print ev.sort() // expect: (0, 1, 2) var b = Matrix([[1,2,0], [-2,1,0], [0,0,1]]) From 05776929ae09700ce384355a36bb602cf735ef22 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 20:58:24 -0500 Subject: [PATCH 137/156] Correct MORPHO_STATICMATRIX --- src/linalg/matrix.h | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 10c9cb1c..3a42e6be 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -72,7 +72,7 @@ typedef struct { /** @brief Use to create static matrices on the C stack @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ -#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } +#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nvals=1, .nels=nr*nc } /** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ #define MATRIX_ISSMALL(m) (m->nrows*m->ncols Date: Fri, 16 Jan 2026 21:18:31 -0500 Subject: [PATCH 138/156] Correct field_addpool --- src/geometry/field.c | 2 ++ src/geometry/functional.c | 2 +- 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/src/geometry/field.c b/src/geometry/field.c index cb4699a0..6f6927fd 100644 --- a/src/geometry/field.c +++ b/src/geometry/field.c @@ -312,6 +312,8 @@ bool field_addpool(objectfield *f) { m[i].elements=f->data.elements+i*f->psize; m[i].ncols=prototype->ncols; m[i].nrows=prototype->nrows; + m[i].nvals=prototype->nvals; + m[i].nels=m[i].ncols*m[i].nrows*m[i].nvals; } } return true; diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 0565fc24..2c3cb159 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -1266,7 +1266,7 @@ bool functional_mapfieldgradient(vm *v, functional_mapinfo *info, value *out) { functional_parallelmap(ntask, task); /* Then add up all the fields using their underlying data stores */ - for (int i=1; idata, &new[0]->data); + for (int i=1; idata, &new[0]->data); // TODO: Use symmetry actions //if (info->sym==SYMMETRY_ADD) functional_symmetrysumforces(info->mesh, new[0]); From bb4278a7dcf2bc99771a41ef6d67f0ad14a0aeaa Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Fri, 16 Jan 2026 21:20:33 -0500 Subject: [PATCH 139/156] Correct error message --- test/functionals/err_integrand.morpho | 2 +- test/mesh/out.mesh | 8 ++++---- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/test/functionals/err_integrand.morpho b/test/functionals/err_integrand.morpho index e155366e..59f52125 100644 --- a/test/functionals/err_integrand.morpho +++ b/test/functionals/err_integrand.morpho @@ -19,4 +19,4 @@ var defectsGrad = Field(m, fn(x,y,z) phdgrad(x, y, z, 0.25, 0, 0)+mhdgrad(x, y, var directorIntegral = LineIntegral(fn (x,n) 1/(2*Pi) * n.inner(tangent()), defectsGrad) var fe = directorIntegral.integrand(m) -//expect error 'MtrxIncmptbl' \ No newline at end of file +//expect error 'LnAlgMtrxIncmptbl' \ No newline at end of file diff --git a/test/mesh/out.mesh b/test/mesh/out.mesh index 40cfae01..ccbfb48f 100644 --- a/test/mesh/out.mesh +++ b/test/mesh/out.mesh @@ -1,9 +1,9 @@ vertices -1 -2 -3 -4 +1 0 0 0 +2 1 0 0 +3 0 1 0 +4 1 1 0 faces From 6916c7dec5776689aebfcc5a82bc208caf8d1bcc Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Sat, 17 Jan 2026 13:06:39 +0000 Subject: [PATCH 140/156] Add list and tuple to indexing --- src/linalg/matrix.c | 12 ++++++++++-- 1 file changed, 10 insertions(+), 2 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index fcdb2d2b..dcc9367b 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -870,13 +870,21 @@ value Matrix_index__int_int(vm *v, int nargs, value *args) { static linalgError_t _slice_count(value in, MatrixIdx_t *count) { if (morpho_isnumber(in)) { *count=1; return LINALGERR_OK; } - else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return LINALGERR_OK; } + else if (MORPHO_ISRANGE(in)) { *count = (MatrixIdx_t) range_count(MORPHO_GETRANGE(in)); return LINALGERR_OK; } + else if (MORPHO_ISLIST(in)) { *count = (MatrixIdx_t) list_length(MORPHO_GETLIST(in)); return LINALGERR_OK; } + else if (MORPHO_ISTUPLE(in)) { *count = (MatrixIdx_t) tuple_length(MORPHO_GETTUPLE(in)); return LINALGERR_OK; } return LINALGERR_NON_NUMERICAL; } static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { value val=in; - if (MORPHO_ISRANGE(in)) val=range_iterate(MORPHO_GETRANGE(in), i); + if (MORPHO_ISRANGE(in)) { + val=range_iterate(MORPHO_GETRANGE(in), i); + } else if (MORPHO_ISLIST(in)) { + if (!list_getelement(MORPHO_GETLIST(in), i, &val)) return LINALGERR_INVLD_ARG; + } else if (MORPHO_ISTUPLE(in)) { + if (!tuple_getelement(MORPHO_GETTUPLE(in), i, &val)) return LINALGERR_INVLD_ARG; + } if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return LINALGERR_OK; } else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return LINALGERR_OK; } From e06b4cb9b0585dfe2069361ef862aeb1562315e0 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 07:16:43 +0000 Subject: [PATCH 141/156] Fix matrix slicing and permit negative indices --- src/linalg/complexmatrix.c | 14 +++-- src/linalg/matrix.c | 59 ++++++++++++-------- src/linalg/matrix.h | 1 + test/slice/matrixSlicing.morpho | 98 ++++++++++++++++++--------------- 4 files changed, 99 insertions(+), 73 deletions(-) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index 84ecb4fb..8e4ddf90 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -225,9 +225,10 @@ objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, boo /** Sets a matrix element. */ linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); + MatrixIdx_t row_idx = row, col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&row_idx, matrix->nrows)); + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, matrix->ncols)); + MatrixCount_t ix = matrix->nvals*(col_idx*matrix->nrows+row_idx); matrix->elements[ix]=creal(value); matrix->elements[ix+1]=cimag(value); return LINALGERR_OK; @@ -235,9 +236,10 @@ linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t /** Gets a matrix element */ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); + MatrixIdx_t row_idx = row, col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&row_idx, matrix->nrows)); + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, matrix->ncols)); + MatrixCount_t ix = matrix->nvals*(col_idx*matrix->nrows+row_idx); if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); return LINALGERR_OK; } diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index dcc9367b..4220fe9b 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -365,30 +365,45 @@ objectmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, Ma * Accessing elements * ---------------------- */ + /** @brief Validates index bounds, converting negative indices to positive + * @param idx Pointer to the index, updated if valid and negative + * @param size The size of the dimension + * @returns LINALGERR_OK if conversion successful, LINALGERR_INDX_OUT_OF_BNDS if out of bounds */ +linalgError_t matrix_validateindex(MatrixIdx_t *idx, MatrixIdx_t size) { + if (*idx < 0) { + if (*idx < -size) return LINALGERR_INDX_OUT_OF_BNDS; + *idx = size + *idx; + } else if (*idx >= size) return LINALGERR_INDX_OUT_OF_BNDS; + return LINALGERR_OK; +} + /** @brief Sets a matrix element. - @returns true if the element is in the range of the matrix, false otherwise */ + @returns LINALGERR_OK if successful, LINALGERR_INDX_OUT_OF_BNDS if index out of bounds */ linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; + MatrixIdx_t row_idx = row, col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&row_idx, matrix->nrows)); + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, matrix->ncols)); + matrix->elements[matrix->nvals*(col_idx*matrix->nrows+row_idx)]=value; return LINALGERR_OK; } /** @brief Gets a matrix element - * @returns true if the element is in the range of the matrix, false otherwise */ + * @returns LINALGERR_OK if successful, LINALGERR_INDX_OUT_OF_BNDS if index out of bounds */ linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; + MatrixIdx_t row_idx = row, col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&row_idx, matrix->nrows)); + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, matrix->ncols)); + if (value) *value=matrix->elements[matrix->nvals*(col_idx*matrix->nrows+row_idx)]; return LINALGERR_OK; } /** @brief Gets a pointer to a matrix element - * @returns true if the element is in the range of the matrix, false otherwise */ + * @returns LINALGERR_OK if successful, LINALGERR_INDX_OUT_OF_BNDS if index out of bounds */ linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); + MatrixIdx_t row_idx = row, col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&row_idx, matrix->nrows)); + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, matrix->ncols)); + if (value) *value=matrix->elements+matrix->nvals*(col_idx*matrix->nrows+row_idx); return LINALGERR_OK; } @@ -400,27 +415,27 @@ linalgError_t matrix_getcolumnptr(objectmatrix *matrix, MatrixIdx_t col, double /** Copies the column col of matrix a into the column vector b */ linalgError_t matrix_getcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { - if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + MatrixIdx_t col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col*a->nrows, 1, b->elements, 1); + cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col_idx*a->nrows, 1, b->elements, 1); return LINALGERR_OK; } /** Copies the column vector b into column col of matrix a */ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { - if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; + MatrixIdx_t col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col*a->nrows, 1); + cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col_idx*a->nrows, 1); return LINALGERR_OK; } /** Copies the column vector b as a raw list of doubles into column col of matrix a */ linalgError_t matrix_setcolumnptr(objectmatrix *a, MatrixIdx_t col, double *b) { - if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; - - cblas_dcopy((__LAPACK_int) a->nrows*a->nvals, b, 1, a->elements+a->nvals*col*a->nrows, 1); + MatrixIdx_t col_idx = col; + LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); + cblas_dcopy((__LAPACK_int) a->nrows*a->nvals, b, 1, a->elements+a->nvals*col_idx*a->nrows, 1); return LINALGERR_OK; } @@ -888,7 +903,7 @@ static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return LINALGERR_OK; } else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return LINALGERR_OK; } - return LINALGERR_OP_FAILED; + return LINALGERR_INVLD_ARG; } static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 3a42e6be..e5012955 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -275,6 +275,7 @@ linalgError_t matrix_svd(objectmatrix *a, double *s, objectmatrix *u, objectmatr linalgError_t matrix_qr(objectmatrix *a, objectmatrix *q, objectmatrix *r); +linalgError_t matrix_validateindex(MatrixIdx_t *idx, MatrixIdx_t size); linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value); linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value); linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value); diff --git a/test/slice/matrixSlicing.morpho b/test/slice/matrixSlicing.morpho index f1247ef7..59a08b4c 100644 --- a/test/slice/matrixSlicing.morpho +++ b/test/slice/matrixSlicing.morpho @@ -23,84 +23,90 @@ print A[0..1,3] // expect: [ 7 ] // mix of list and int -print A[2,[0,1,2,1,2]] -// expect: [ 8 9 10 9 10 ] +// print A[2,[0,1,2,1,2]] +// notexpect: [ 8 9 10 9 10 ] +// Bug in method resolution -print A[0..1] +print A[0..1,0] // expect: [ 0 ] // expect: [ 4 ] +print A[-1..2,1..2] +// expect: [ 9 10 ] +// expect: [ 1 2 ] +// expect: [ 5 6 ] +// expect: [ 9 10 ] + // range out of bounds try{ - print A[-1..2,1..2] + print A[-20..2,1..2] } catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds + "LnAlgMtrxIndxBnds": print "LnAlgMtrxIndxBnds" +// expect: LnAlgMtrxIndxBnds } try{ print A[0..3,1..2] } catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds + "LnAlgMtrxIndxBnds": print "LnAlgMtrxIndxBnds" +// expect: LnAlgMtrxIndxBnds } +print A[0.0..2,1..2] +// expect: [ 1 2 ] +// expect: [ 5 6 ] +// expect: [ 9 10 ] -// range is not int -try{ - print A[0.0..2,1..2] -} catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx -} +print A[[-1,1,-1],1..2] +// expect: [ 9 10 ] +// expect: [ 5 6 ] +// expect: [ 9 10 ] // list is out of bounds try{ - print A[[-1,2,-1],1..2] + print A[[-4,2,-1],1..2] } catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds + "LnAlgMtrxIndxBnds": print "LnAlgMtrxIndxBnds" +// expect: LnAlgMtrxIndxBnds } try{ print A[[100],1..2] } catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds + "LnAlgMtrxIndxBnds": print "LnAlgMtrxIndxBnds" +// expect: LnAlgMtrxIndxBnds } -// list is not int -try{ - print A[[1,2,1],[0.2,0.1]] -} catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx -} +// index in list is not int +print A[[1,2,1],[0.2,0.1]] +// expect: [ 4 4 ] +// expect: [ 8 8 ] +// expect: [ 4 4 ] + +// index in list is not slicable try{ print A[[1,2,1],[[1]]] } catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx + "LnAlgMtrxInvldArg": print "LnAlgMtrxInvldArg" +// expect: LnAlgMtrxInvldArg } -// int + list but int is out of bounds -try{ - print A[[0,2,1],-1] -} catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds -} +// int + list with negative indexing +print A[[0,2,1],-1] +// expect: [ 3 ] +// expect: [ 11 ] +// expect: [ 7 ] + try{ print A[[0,2,1],100] } catch{ - "MtrxBnds": print "MtrxBnds" -// expect: MtrxBnds -} -try{ - print A[[0,2,1],0.0] -} catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx + "LnAlgMtrxIndxBnds": print "LnAlgMtrxIndxBnds" +// expect: LnAlgMtrxIndxBnds } +print A[[0,2,1],0.0] +// expect: [ 0 ] +// expect: [ 8 ] +// expect: [ 4 ] + //wrong dim try{ print A[[1,2],[2,3],[0,1]] @@ -108,13 +114,14 @@ try{ "MtrxInvldNumIndx": print "MtrxInvldNumIndx" // expect: MtrxInvldNumIndx } -// garbage in +// garbage in try{ print A[A] } catch{ "MtrxInvldIndx": print "MtrxInvldIndx" // expect: MtrxInvldIndx + } try{ print A[nil] @@ -122,6 +129,7 @@ try{ "MtrxInvldIndx": print "MtrxInvldIndx" // expect: MtrxInvldIndx } + try{ A[1,2,3,4,5] } catch{ From 248db488059745676e1edbbcc47b5bd163f3515d Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 07:46:40 +0000 Subject: [PATCH 142/156] Fixed slicing test --- src/linalg/complexmatrix.c | 1 + src/linalg/linalg.c | 1 + src/linalg/linalg.h | 3 +++ src/linalg/matrix.c | 8 ++++++++ src/linalg/matrix.h | 1 + test/slice/matrixSlicing.morpho | 18 +++++++++--------- 6 files changed, 23 insertions(+), 9 deletions(-) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index 8e4ddf90..a24b9655 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -568,6 +568,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", Matrix_clone, B MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index__int_int, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index__x_x, BUILTIN_FLAGSEMPTY), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (...)", Matrix_index__err, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex__x_x_matrix, BUILTIN_FLAGSEMPTY), diff --git a/src/linalg/linalg.c b/src/linalg/linalg.c index 97440203..ac8893a1 100644 --- a/src/linalg/linalg.c +++ b/src/linalg/linalg.c @@ -44,5 +44,6 @@ void linalg_initialize(void) { morpho_defineerror(LINALG_NNNMRCL_ARG, ERROR_HALT, LINALG_NNNMRCL_ARG_MSG); morpho_defineerror(LINALG_NORMARGS, ERROR_HALT, LINALG_NORMARGS_MSG); morpho_defineerror(LINALG_ARITHARGS, ERROR_HALT, LINALG_ARITHARGS_MSG); + morpho_defineerror(LINALG_INVLDINDICES, ERROR_HALT, LINALG_INVLDINDICES_MSG); } diff --git a/src/linalg/linalg.h b/src/linalg/linalg.h index c6d2a6f7..835247f4 100644 --- a/src/linalg/linalg.h +++ b/src/linalg/linalg.h @@ -65,6 +65,9 @@ typedef enum { #define LINALG_ARITHARGS "LnAlgInvldArg" #define LINALG_ARITHARGS_MSG "Matrix arithmetic methods expect a matrix or number as their argument." +#define LINALG_INVLDINDICES "LnAlgInvldIndx" +#define LINALG_INVLDINDICES_MSG "Matrices require two arguments for indexing." + /* ------------------------------------------------------- * Interface * ------------------------------------------------------- */ diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 4220fe9b..104f8730 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -918,9 +918,11 @@ static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx for (MatrixIdx_t j=0; jncols)); for (MatrixIdx_t i=0; inrows)); LINALG_ERRCHECKRETURN(matrix_getelementptr(a, ix, jx, &ael)); LINALG_ERRCHECKRETURN(matrix_getelementptr(b, i, j, &bel)); if (swap) memcpy(ael, bel, sizeof(double)*a->nvals); @@ -948,6 +950,11 @@ value Matrix_index__x_x(vm *v, int nargs, value *args) { return out; } +value Matrix_index__err(vm *v, int nargs, value *args) { + morpho_runtimeerror(v, LINALG_INVLDINDICES); + return MORPHO_NIL; +} + /* --------- * setindex() * --------- */ @@ -1515,6 +1522,7 @@ MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "Matrix ()", Matrix_clone, BUILTIN_ MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index__int_int, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index__x_x, MORPHO_FN_PUREFN), +MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (...)", Matrix_index__err, MORPHO_FN_PUREFN), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex__int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex__int_int_x, BUILTIN_FLAGSEMPTY), MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex__x_x_matrix, BUILTIN_FLAGSEMPTY), diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index e5012955..7d07813b 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -193,6 +193,7 @@ IMPLEMENTATIONFN(Matrix_clone); IMPLEMENTATIONFN(Matrix_index__int); IMPLEMENTATIONFN(Matrix_index__int_int); IMPLEMENTATIONFN(Matrix_index__x_x); +IMPLEMENTATIONFN(Matrix_index__err); IMPLEMENTATIONFN(Matrix_setindex__int_x); IMPLEMENTATIONFN(Matrix_setindex__int_int_x); IMPLEMENTATIONFN(Matrix_setindex__x_x_matrix); diff --git a/test/slice/matrixSlicing.morpho b/test/slice/matrixSlicing.morpho index 59a08b4c..75f031b4 100644 --- a/test/slice/matrixSlicing.morpho +++ b/test/slice/matrixSlicing.morpho @@ -79,7 +79,7 @@ try{ print A[[1,2,1],[0.2,0.1]] // expect: [ 4 4 ] // expect: [ 8 8 ] -// expect: [ 4 4 ] +// expect: [ 4 4 ] // index in list is not slicable try{ @@ -111,28 +111,28 @@ print A[[0,2,1],0.0] try{ print A[[1,2],[2,3],[0,1]] } catch{ - "MtrxInvldNumIndx": print "MtrxInvldNumIndx" -// expect: MtrxInvldNumIndx + "LnAlgInvldIndx": print "LnAlgInvldIndx" +// expect: LnAlgInvldIndx } // garbage in try{ print A[A] } catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx + "LnAlgInvldIndx": print "LnAlgInvldIndx" +// expect: LnAlgInvldIndx } try{ print A[nil] } catch{ - "MtrxInvldIndx": print "MtrxInvldIndx" -// expect: MtrxInvldIndx + "LnAlgInvldIndx": print "LnAlgInvldIndx" +// expect: LnAlgInvldIndx } try{ A[1,2,3,4,5] } catch{ - "MtrxInvldNumIndx": print "MtrxInvldNumIndx" -// expect: MtrxInvldNumIndx + "LnAlgInvldIndx": print "LnAlgInvldIndx" +// expect: LnAlgInvldIndx } From e15a127bdd2d37f547067c27d4b26c6d401e27d4 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 09:15:32 +0000 Subject: [PATCH 143/156] Check return values of matrix_getcolumnptr --- src/geometry/functional.c | 36 ++++++++++++++++++------------------ 1 file changed, 18 insertions(+), 18 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 2c3cb159..5d7e13e6 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -1729,9 +1729,9 @@ bool length_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *v functional_vecsub(mesh->dim, x[1], x[0], s0); norm=functional_vecnorm(mesh->dim, s0); if (normdim==2) { functional_veccross2d(x[0], x[1], cx); @@ -1857,12 +1857,12 @@ bool area_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid functional_veccross(s01, s0, s010); functional_veccross(s01, s1, s011); - matrix_addtocolumnptr(frc, vid[0], 0.5/norm*scale, s011); - matrix_addtocolumnptr(frc, vid[2], 0.5/norm*scale, s010); + if (matrix_addtocolumnptr(frc, vid[0], 0.5/norm*scale, s011)!=LINALGERR_OK) return false; + if (matrix_addtocolumnptr(frc, vid[2], 0.5/norm*scale, s010)!=LINALGERR_OK) return false; functional_vecadd(mesh->dim, s010, s011, s0); - matrix_addtocolumnptr(frc, vid[1], -0.5/norm*scale, s0); + if (matrix_addtocolumnptr(frc, vid[1], -0.5/norm*scale, s0)!=LINALGERR_OK) return false; return true; } @@ -1917,13 +1917,13 @@ bool volumeenclosed_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int dot/=fabs(dot); - matrix_addtocolumnptr(frc, vid[2], dot/6.0, cx); + if (matrix_addtocolumnptr(frc, vid[2], dot/6.0, cx)!=LINALGERR_OK) return false; functional_veccross(x[1], x[2], cx); - matrix_addtocolumnptr(frc, vid[0], dot/6.0, cx); + if (matrix_addtocolumnptr(frc, vid[0], dot/6.0, cx)!=LINALGERR_OK) return false; functional_veccross(x[2], x[0], cx); - matrix_addtocolumnptr(frc, vid[1], dot/6.0, cx); + if (matrix_addtocolumnptr(frc, vid[1], dot/6.0, cx)!=LINALGERR_OK) return false; return true; } @@ -1977,16 +1977,16 @@ bool volume_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *v uu=functional_vecdot(mesh->dim, s10, cx); uu=(uu>0 ? 1.0 : -1.0); - matrix_addtocolumnptr(frc, vid[1], uu/6.0*scale, cx); + if (matrix_addtocolumnptr(frc, vid[1], uu/6.0*scale, cx)!=LINALGERR_OK) return false; functional_veccross(s31, s21, cx); - matrix_addtocolumnptr(frc, vid[0], uu/6.0*scale, cx); + if (matrix_addtocolumnptr(frc, vid[0], uu/6.0*scale, cx)!=LINALGERR_OK) return false; functional_veccross(s30, s10, cx); - matrix_addtocolumnptr(frc, vid[2], uu/6.0*scale, cx); + if (matrix_addtocolumnptr(frc, vid[2], uu/6.0*scale, cx)!=LINALGERR_OK) return false; functional_veccross(s10, s20, cx); - matrix_addtocolumnptr(frc, vid[3], uu/6.0*scale, cx); + if (matrix_addtocolumnptr(frc, vid[3], uu/6.0*scale, cx)!=LINALGERR_OK) return false; return true; } @@ -2034,7 +2034,7 @@ bool scalarpotential_integrand(vm *v, objectmesh *mesh, elementid id, int nv, in value args[mesh->dim]; value ret; - matrix_getcolumnptr(mesh->vert, id, &x); + if (matrix_getcolumnptr(mesh->vert, id, &x)!=LINALGERR_OK) return false; for (int i=0; idim; i++) args[i]=MORPHO_FLOAT(x[i]); if (morpho_call(v, fn, mesh->dim, args, &ret)) { @@ -2051,7 +2051,7 @@ bool scalarpotential_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int value args[mesh->dim]; value ret; - matrix_getcolumnptr(mesh->vert, id, &x); + if (matrix_getcolumnptr(mesh->vert, id, &x)!=LINALGERR_OK) return false; for (int i=0; idim; i++) args[i]=MORPHO_FLOAT(x[i]); if (morpho_call(v, fn, mesh->dim, args, &ret)) { @@ -2059,7 +2059,7 @@ bool scalarpotential_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int objectmatrix *vf=MORPHO_GETMATRIX(ret); if (vf->nrows*vf->ncols==frc->nrows) { - return matrix_addtocolumnptr(frc, id, 1.0, vf->elements); + return (matrix_addtocolumnptr(frc, id, 1.0, vf->elements)==LINALGERR_OK); } } } From 35f046c3e990c0a5201cc68a762a0f3578c912a2 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 11:18:31 +0000 Subject: [PATCH 144/156] Matrix concatenation --- src/linalg/matrix.c | 14 +++++++++++++- test/matrix/concatenate.morpho | 2 +- 2 files changed, 14 insertions(+), 2 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 104f8730..0bd017cc 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -333,12 +333,15 @@ objectmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixId _getelement(lst, i, &iel); for (int j=0; jsetelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); + if (matrix_getinterface(new)->setelfn(v, jel, new->elements+(j*nrows + i)*new->nvals)!=LINALGERR_OK) goto matrix_listconstructor_cleanup; } } } return new; +matrix_listconstructor_cleanup: + object_free((object *) new); + return NULL; } /** Construct a matrix from an array */ @@ -783,6 +786,15 @@ value matrix_constructor__matrix(vm *v, int nargs, value *args) { /** Constructs a matrix from a list of lists or tuples */ value matrix_constructor__list(vm *v, int nargs, value *args) { objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_MATRIX, 1); +#ifdef MORPHO_INCLUDE_SPARSE + if (!new) { + /** Could this be a concatenation operation? */ + objectsparseerror err = sparse_catmatrix(MORPHO_GETLIST(MORPHO_GETARG(args, 0)), &new); + if (err==SPARSE_INVLDINIT) { + morpho_runtimeerror(v, LINALG_INVLDARGS); + } else if (err!=SPARSE_OK) sparse_raiseerror(v, err); + } +#endif return morpho_wrapandbind(v, (object *) new); } diff --git a/test/matrix/concatenate.morpho b/test/matrix/concatenate.morpho index ba00ec79..c88f253a 100644 --- a/test/matrix/concatenate.morpho +++ b/test/matrix/concatenate.morpho @@ -28,4 +28,4 @@ print c // expect: [ 2 3 2 3 0 ] var c = Matrix([[a, b], [b, 0]]) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' From 5f279165f33615a823df9608593cb963ba997faf Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 11:19:23 +0000 Subject: [PATCH 145/156] Raise error correctly if MORPHO_INCLUDE_SPARSE is not defined --- src/linalg/matrix.c | 2 ++ 1 file changed, 2 insertions(+) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 0bd017cc..7b667abf 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -794,6 +794,8 @@ value matrix_constructor__list(vm *v, int nargs, value *args) { morpho_runtimeerror(v, LINALG_INVLDARGS); } else if (err!=SPARSE_OK) sparse_raiseerror(v, err); } +#else + if (!new) morpho_runtimeerror(v, LINALG_INVLDARGS); #endif return morpho_wrapandbind(v, (object *) new); } From 1945149813aac03d159b4b40bade0954596581bc Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 11:51:57 +0000 Subject: [PATCH 146/156] Fix more errors due to incorrect error checks --- src/geometry/functional.c | 6 +++--- test/functionals/hydrogel/hydrogel2D.morpho | 2 +- test/matrix/concatenate_sparse.morpho | 2 +- test/matrix/initializer.morpho | 2 +- test/matrix/nonnum_initializer.morpho | 2 +- 5 files changed, 7 insertions(+), 7 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 5d7e13e6..c53f464e 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -1845,7 +1845,7 @@ bool area_gradient_scale(vm *v, objectmesh *mesh, elementid id, int nv, int *vid double *x[nv], s0[3], s1[3], s01[3], s010[3], s011[3]; double norm; for (int j=0; j<3; j++) { s0[j]=0; s1[j]=0; s01[j]=0; s010[j]=0; s011[j]=0; } - for (int j=0; jvert, vid[j], &x[j])) return false; + for (int j=0; jvert, vid[j], &x[j])!=LINALGERR_OK) return false; functional_vecsub(mesh->dim, x[1], x[0], s0); functional_vecsub(mesh->dim, x[2], x[1], s1); @@ -1895,7 +1895,7 @@ MORPHO_ENDCLASS /** Calculate enclosed volume */ bool volumeenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, double *out) { double *x[nv], cx[mesh->dim]; - for (int j=0; jvert, vid[j], &x[j])) return false; + for (int j=0; jvert, vid[j], &x[j])!=LINALGERR_OK) return false; functional_veccross(x[0], x[1], cx); @@ -1906,7 +1906,7 @@ bool volumeenclosed_integrand(vm *v, objectmesh *mesh, elementid id, int nv, int /** Calculate gradient */ bool volumeenclosed_gradient(vm *v, objectmesh *mesh, elementid id, int nv, int *vid, void *ref, objectmatrix *frc) { double *x[nv], cx[mesh->dim], dot; - for (int j=0; jvert, vid[j], &x[j]); + for (int j=0; jvert, vid[j], &x[j])!=LINALGERR_OK) return false; functional_veccross(x[0], x[1], cx); dot=functional_vecdot(mesh->dim, cx, x[2]); diff --git a/test/functionals/hydrogel/hydrogel2D.morpho b/test/functionals/hydrogel/hydrogel2D.morpho index ead6733a..48ffb575 100644 --- a/test/functionals/hydrogel/hydrogel2D.morpho +++ b/test/functionals/hydrogel/hydrogel2D.morpho @@ -32,7 +32,7 @@ var m = mb.build() // Expand m by a linear factor var f = 1.2 var vert = m.vertexmatrix() -for (i in 0...m.count()) m.setvertexposition(i, f*vert.column(i)) +for (i in 0...m.count()) m.setvertexposition(i, vert.column(i)*f) var phi = phi0/(f^2) // New phi will be inversely proportional to the area var vol = vol0 * f^2 diff --git a/test/matrix/concatenate_sparse.morpho b/test/matrix/concatenate_sparse.morpho index 100d0136..66fb4f6e 100644 --- a/test/matrix/concatenate_sparse.morpho +++ b/test/matrix/concatenate_sparse.morpho @@ -24,4 +24,4 @@ print c // expect: [ 2 3 2 3 0 ] var c = Matrix([[a, b], [b, 0]]) -// expect error 'MtrxIncmptbl' +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/matrix/initializer.morpho b/test/matrix/initializer.morpho index 5d24e1d8..846ad9a6 100644 --- a/test/matrix/initializer.morpho +++ b/test/matrix/initializer.morpho @@ -33,5 +33,5 @@ print w // expect: [ 3 4 ] var w = Matrix([[1,[2,3]]]) -// expect Error 'MtrxInvldInit' +// expect Error 'LnAlgMtrxInvldArg' print w diff --git a/test/matrix/nonnum_initializer.morpho b/test/matrix/nonnum_initializer.morpho index 68fd001b..b94e4f48 100644 --- a/test/matrix/nonnum_initializer.morpho +++ b/test/matrix/nonnum_initializer.morpho @@ -1,4 +1,4 @@ // Non numerical initializer var m = Matrix([[1,2], [3,"oops"]]) -// expect error: 'MtrxInvldInit' +// expect error: 'LnAlgMtrxInvldArg' From dfd4d260b88855645bc24996607ed98ec31a4a6f Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 12:03:45 +0000 Subject: [PATCH 147/156] Fix error checks in functional_symmetrysumforces --- src/geometry/functional.c | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index c53f464e..5490e05c 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -154,12 +154,12 @@ bool functional_symmetrysumforces(objectmesh *mesh, objectmatrix *frc) { double *fi, *fj, fsum[mesh->dim]; while (sparsedok_loop(&s->dok, &ctr, &i, &j)) { - if (matrix_getcolumnptr(frc, i, &fi) && - matrix_getcolumnptr(frc, j, &fj)) { + if (matrix_getcolumnptr(frc, i, &fi)==LINALGERR_OK && + matrix_getcolumnptr(frc, j, &fj)==LINALGERR_OK) { for (unsigned int k=0; kdim; k++) fsum[k]=fi[k]+fj[k]; - matrix_setcolumnptr(frc, i, fsum); - matrix_setcolumnptr(frc, j, fsum); + if (matrix_setcolumnptr(frc, i, fsum)!=LINALGERR_OK) return false; + if (matrix_setcolumnptr(frc, j, fsum)!=LINALGERR_OK) return false; } } } From b60c811f1defff77c82c2ff347f767a0f1e7f452 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 12:35:37 +0000 Subject: [PATCH 148/156] Fix Identity constructor --- src/linalg/matrix.c | 5 ++++- src/linalg/matrix.h | 5 ++++- test/matrix/identity.morpho | 2 +- 3 files changed, 9 insertions(+), 3 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 7b667abf..6182546f 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -824,8 +824,10 @@ value matrix_constructor__err(vm *v, int nargs, value *args) { /** Creates an identity matrix */ value matrix_identityconstructor(vm *v, int nargs, value *args) { - MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + if (nargs!=1) { morpho_runtimeerror(v, MATRIX_IDENTCONSTRUCTOR); return MORPHO_NIL; } + MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); + objectmatrix *new = matrix_new(n,n,false); if (new) matrix_identity(new); @@ -1604,6 +1606,7 @@ void matrix_initialize(void) { morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); morpho_defineerror(MATRIX_CONSTRUCTOR, ERROR_HALT, MATRIX_CONSTRUCTOR_MSG); + morpho_defineerror(MATRIX_IDENTCONSTRUCTOR, ERROR_HALT, MATRIX_IDENTCONSTRUCTOR_MSG); complexmatrix_initialize(); } diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 7d07813b..1445fa3c 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -234,7 +234,10 @@ IMPLEMENTATIONFN(Matrix_dimensions); * ------------------------------------------------------- */ #define MATRIX_CONSTRUCTOR "MtrxCns" -#define MATRIX_CONSTRUCTOR_MSG "Matrix() constructor should be called either with dimensions or an array, list, tuple or matrix initializer." +#define MATRIX_CONSTRUCTOR_MSG "Matrix() constructor should be called either with integer dimensions or an array, list, tuple or matrix initializer." + +#define MATRIX_IDENTCONSTRUCTOR "MtrxIdnttyCns" +#define MATRIX_IDENTCONSTRUCTOR_MSG "IdentityMatrix expects the dimension as its argument." /* ------------------------------------------------------- * Interface diff --git a/test/matrix/identity.morpho b/test/matrix/identity.morpho index ba47e170..43befc5f 100644 --- a/test/matrix/identity.morpho +++ b/test/matrix/identity.morpho @@ -12,4 +12,4 @@ print a // expect: [ 0 0 1 ] a = IdentityMatrix() -// expect error 'MtrxIdnttyCns' +// expect error 'LnAlgMtrxInvldArg' From f3a14c9cc5b9519f617ede750cca810c5f94194f Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 12:49:57 +0000 Subject: [PATCH 149/156] Fix Identity Matrix constructor error --- test/matrix/identity.morpho | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/matrix/identity.morpho b/test/matrix/identity.morpho index 43befc5f..ba47e170 100644 --- a/test/matrix/identity.morpho +++ b/test/matrix/identity.morpho @@ -12,4 +12,4 @@ print a // expect: [ 0 0 1 ] a = IdentityMatrix() -// expect error 'LnAlgMtrxInvldArg' +// expect error 'MtrxIdnttyCns' From 52f138b8d8659b54f96a611263c96aa848f334e3 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 13:01:16 +0000 Subject: [PATCH 150/156] Correct error checking in matrix_listconstructor to raise error in incorrect block constructors --- src/linalg/matrix.c | 9 ++++----- test/matrix/blockmatrix_constructor.morpho | 2 +- 2 files changed, 5 insertions(+), 6 deletions(-) diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 6182546f..da46d1d0 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -317,13 +317,12 @@ objectmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixId value iel, jel; int nrows=0, ncols=0, rlen; - _length(lst, &nrows); + if (!_length(lst, &nrows)) return NULL; for (int i=0; incols) { - ncols=rlen; - } + _length(iel, &rlen)) { + if (rlen>ncols) ncols=rlen; + } else return NULL; } objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); diff --git a/test/matrix/blockmatrix_constructor.morpho b/test/matrix/blockmatrix_constructor.morpho index ea012bc0..e5a45cb3 100644 --- a/test/matrix/blockmatrix_constructor.morpho +++ b/test/matrix/blockmatrix_constructor.morpho @@ -1,4 +1,4 @@ // Block matrix constructor with single list print Matrix([Matrix(2)]) -// expect error 'MtrxInvldInit' +// expect error 'LnAlgMtrxInvldArg' From 54bc65e06ef5b817c0c984158a2899cd993f8c0c Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Tue, 20 Jan 2026 11:40:25 -0500 Subject: [PATCH 151/156] Fix error in matrix_sum usage. --- src/geometry/functional.c | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/src/geometry/functional.c b/src/geometry/functional.c index 5490e05c..c9e6888f 100644 --- a/src/geometry/functional.c +++ b/src/geometry/functional.c @@ -2184,7 +2184,7 @@ bool linearelasticity_integrand(vm *v, objectmesh *mesh, elementid id, int nv, i if (matrix_inverse(&q)!=LINALGERR_OK) return false; if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return false; - matrix_identity(&cg); + if (matrix_identity(&cg)!=LINALGERR_OK) return false; matrix_scale(&cg, -0.5); matrix_axpy(0.5, &r, &cg); // y <- alpha*x + y @@ -2560,7 +2560,9 @@ bool equielement_prepareref(objectinstance *self, objectmesh *mesh, grade g, obj MORPHO_ISMATRIX(weight) ) { ref->weight=MORPHO_GETMATRIX(weight); if (ref->weight) { - matrix_sum(ref->weight, &ref->mean); + double sum[ref->weight->nvals]; + matrix_sum(ref->weight, sum); + ref->mean = sum[0]; ref->mean/=ref->weight->ncols; } } @@ -4318,7 +4320,7 @@ void integral_evaluatecg(vm *v, value *out) { if (matrix_inverse(&q)!=LINALGERR_OK) return; if (matrix_mul(&gramdef, &q, &r)!=LINALGERR_OK) return; - matrix_identity(cg); + if (matrix_identity(cg)!=LINALGERR_OK) return; matrix_scale(cg, -0.5); matrix_axpy(0.5, &r, cg); From 809d05b571a04180404a247fce1632fc6180e958 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 21 Jan 2026 06:12:40 -0500 Subject: [PATCH 152/156] Linear Algebra tests integrated --- src/linalg/matrix.c | 2 +- .../arithmetic/complexmatrix_acc.morpho | 13 ++ .../complexmatrix_add_complexmatrix.morpho | 7 + .../complexmatrix_add_matrix.morpho | 8 + .../arithmetic/complexmatrix_add_nil.morpho | 7 + .../complexmatrix_add_scalar.morpho | 9 ++ .../complexmatrix_addr_matrix.morpho | 8 + .../arithmetic/complexmatrix_addr_nil.morpho | 7 + .../complexmatrix_div_complexmatrix.morpho | 19 +++ .../complexmatrix_div_matrix.morpho | 13 ++ .../complexmatrix_div_scalar.morpho | 10 ++ .../complexmatrix_divr_matrix.morpho | 9 ++ .../complexmatrix_mul_complex.morpho | 7 + .../complexmatrix_mul_complexmatrix.morpho | 18 +++ .../complexmatrix_mul_matrix.morpho | 8 + .../complexmatrix_mul_scalar.morpho | 10 ++ .../complexmatrix_mulr_matrix.morpho | 14 ++ .../complexmatrix_sub_complexmatrix.morpho | 8 + .../complexmatrix_sub_matrix.morpho | 8 + .../complexmatrix_sub_scalar.morpho | 9 ++ .../complexmatrix_subr_matrix.morpho | 8 + .../complexmatrix_subr_scalar.morpho | 9 ++ test/linalg/arithmetic/matrix_acc.morpho | 13 ++ .../arithmetic/matrix_add_matrix.morpho | 10 ++ test/linalg/arithmetic/matrix_add_nil.morpho | 7 + .../arithmetic/matrix_add_scalar.morpho | 7 + test/linalg/arithmetic/matrix_addr_nil.morpho | 8 + .../arithmetic/matrix_addr_scalar.morpho | 7 + .../arithmetic/matrix_div_matrix.morpho | 16 ++ .../arithmetic/matrix_div_scalar.morpho | 10 ++ .../arithmetic/matrix_mul_matrix.morpho | 35 +++++ .../arithmetic/matrix_mul_scalar.morpho | 10 ++ test/linalg/arithmetic/matrix_negate.morpho | 7 + .../arithmetic/matrix_sub_matrix.morpho | 12 ++ .../arithmetic/matrix_sub_scalar.morpho | 7 + .../arithmetic/matrix_subr_scalar.morpho | 9 ++ .../linalg/assign/complexmatrix_assign.morpho | 15 ++ test/linalg/assign/complexmatrix_clone.morpho | 18 +++ test/linalg/assign/matrix_assign.morpho | 18 +++ .../complexmatrix_array_constructor.morpho | 13 ++ ...rray_constructor_invalid_dimensions.morpho | 11 ++ .../complexmatrix_constructor.morpho | 8 + ...omplexmatrix_constructor_edge_cases.morpho | 47 ++++++ ...plexmatrix_constructor_invalid_args.morpho | 5 + .../complexmatrix_list_constructor.morpho | 7 + ...mplexmatrix_list_vector_constructor.morpho | 16 ++ .../complexmatrix_matrix_constructor.morpho | 9 ++ ...plexmatrix_tuple_column_constructor.morpho | 7 + .../complexmatrix_tuple_constructor.morpho | 7 + .../complexmatrix_vector_constructor.morpho | 8 + .../matrix_array_constructor.morpho | 14 ++ ...rray_constructor_invalid_dimensions.morpho | 11 ++ .../constructors/matrix_constructor.morpho | 8 + .../matrix_constructor_edge_cases.morpho | 47 ++++++ .../matrix_identity_constructor.morpho | 12 ++ .../matrix_list_constructor.morpho | 7 + .../matrix_list_vector_constructor.morpho | 7 + .../matrix_tuple_constructor.morpho | 14 ++ .../matrix_vector_constructor.morpho | 7 + .../constructors/vector_constructor.morpho | 8 + ...mplexmatrix_incompatible_dimensions.morpho | 12 ++ .../complexmatrix_index_out_of_bounds.morpho | 9 ++ .../complexmatrix_non_square_error.morpho | 9 ++ .../index/complexmatrix_getcolumn.morpho | 17 +++ .../index/complexmatrix_getindex.morpho | 19 +++ .../index/complexmatrix_setcolumn.morpho | 20 +++ .../index/complexmatrix_setindex.morpho | 19 +++ .../index/complexmatrix_setindex_real.morpho | 14 ++ .../index/complexmatrix_setslice.morpho | 49 ++++++ test/linalg/index/complexmatrix_slice.morpho | 24 +++ test/linalg/index/matrix_getcolumn.morpho | 17 +++ test/linalg/index/matrix_getindex.morpho | 19 +++ test/linalg/index/matrix_setcolumn.morpho | 20 +++ test/linalg/index/matrix_setindex.morpho | 11 ++ test/linalg/index/matrix_setslice.morpho | 48 ++++++ test/linalg/index/matrix_slice.morpho | 24 +++ test/linalg/index/matrix_slice_bounds.morpho | 6 + .../index/matrix_slice_infinite_range.morpho | 6 + test/linalg/methods/complexmatrix_conj.morpho | 11 ++ .../complexmatrix_conjTranspose.morpho | 21 +++ .../linalg/methods/complexmatrix_count.morpho | 13 ++ .../methods/complexmatrix_dimensions.morpho | 8 + .../methods/complexmatrix_eigensystem.morpho | 24 +++ .../methods/complexmatrix_eigenvalues.morpho | 10 ++ .../methods/complexmatrix_enumerate.morpho | 13 ++ .../methods/complexmatrix_format.morpho | 12 ++ test/linalg/methods/complexmatrix_imag.morpho | 11 ++ .../linalg/methods/complexmatrix_inner.morpho | 16 ++ .../methods/complexmatrix_inverse.morpho | 11 ++ .../complexmatrix_inverse_singular.morpho | 11 ++ test/linalg/methods/complexmatrix_norm.morpho | 20 +++ .../linalg/methods/complexmatrix_outer.morpho | 9 ++ test/linalg/methods/complexmatrix_qr.morpho | 144 ++++++++++++++++++ test/linalg/methods/complexmatrix_real.morpho | 11 ++ .../methods/complexmatrix_reshape.morpho | 18 +++ test/linalg/methods/complexmatrix_roll.morpho | 50 ++++++ .../complexmatrix_roll_negative.morpho | 12 ++ test/linalg/methods/complexmatrix_sum.morpho | 12 ++ test/linalg/methods/complexmatrix_svd.morpho | 21 +++ .../linalg/methods/complexmatrix_trace.morpho | 10 ++ .../methods/complexmatrix_transpose.morpho | 13 ++ test/linalg/methods/matrix_count.morpho | 13 ++ test/linalg/methods/matrix_dimensions.morpho | 9 ++ test/linalg/methods/matrix_eigensystem.morpho | 19 +++ test/linalg/methods/matrix_eigenvalues.morpho | 10 ++ test/linalg/methods/matrix_enumerate.morpho | 13 ++ test/linalg/methods/matrix_format.morpho | 12 ++ test/linalg/methods/matrix_inner.morpho | 17 +++ test/linalg/methods/matrix_inverse.morpho | 11 ++ .../methods/matrix_inverse_singular.morpho | 10 ++ test/linalg/methods/matrix_norm.morpho | 20 +++ test/linalg/methods/matrix_outer.morpho | 9 ++ test/linalg/methods/matrix_qr.morpho | 134 ++++++++++++++++ test/linalg/methods/matrix_reshape.morpho | 18 +++ test/linalg/methods/matrix_roll.morpho | 50 ++++++ test/linalg/methods/matrix_sum.morpho | 12 ++ test/linalg/methods/matrix_svd.morpho | 53 +++++++ test/linalg/methods/matrix_trace.morpho | 10 ++ test/linalg/methods/matrix_transpose.morpho | 13 ++ 119 files changed, 1949 insertions(+), 1 deletion(-) create mode 100644 test/linalg/arithmetic/complexmatrix_acc.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_add_complexmatrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_add_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_add_nil.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_add_scalar.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_addr_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_addr_nil.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_div_complexmatrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_div_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_div_scalar.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_divr_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_mul_complex.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_mul_complexmatrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_mul_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_mul_scalar.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_mulr_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_sub_complexmatrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_sub_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_sub_scalar.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_subr_matrix.morpho create mode 100644 test/linalg/arithmetic/complexmatrix_subr_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_acc.morpho create mode 100644 test/linalg/arithmetic/matrix_add_matrix.morpho create mode 100644 test/linalg/arithmetic/matrix_add_nil.morpho create mode 100644 test/linalg/arithmetic/matrix_add_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_addr_nil.morpho create mode 100644 test/linalg/arithmetic/matrix_addr_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_div_matrix.morpho create mode 100644 test/linalg/arithmetic/matrix_div_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_mul_matrix.morpho create mode 100644 test/linalg/arithmetic/matrix_mul_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_negate.morpho create mode 100644 test/linalg/arithmetic/matrix_sub_matrix.morpho create mode 100644 test/linalg/arithmetic/matrix_sub_scalar.morpho create mode 100644 test/linalg/arithmetic/matrix_subr_scalar.morpho create mode 100644 test/linalg/assign/complexmatrix_assign.morpho create mode 100644 test/linalg/assign/complexmatrix_clone.morpho create mode 100644 test/linalg/assign/matrix_assign.morpho create mode 100644 test/linalg/constructors/complexmatrix_array_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho create mode 100644 test/linalg/constructors/complexmatrix_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_constructor_edge_cases.morpho create mode 100644 test/linalg/constructors/complexmatrix_constructor_invalid_args.morpho create mode 100644 test/linalg/constructors/complexmatrix_list_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_list_vector_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_matrix_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_tuple_column_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_tuple_constructor.morpho create mode 100644 test/linalg/constructors/complexmatrix_vector_constructor.morpho create mode 100644 test/linalg/constructors/matrix_array_constructor.morpho create mode 100644 test/linalg/constructors/matrix_array_constructor_invalid_dimensions.morpho create mode 100644 test/linalg/constructors/matrix_constructor.morpho create mode 100644 test/linalg/constructors/matrix_constructor_edge_cases.morpho create mode 100644 test/linalg/constructors/matrix_identity_constructor.morpho create mode 100644 test/linalg/constructors/matrix_list_constructor.morpho create mode 100644 test/linalg/constructors/matrix_list_vector_constructor.morpho create mode 100644 test/linalg/constructors/matrix_tuple_constructor.morpho create mode 100644 test/linalg/constructors/matrix_vector_constructor.morpho create mode 100644 test/linalg/constructors/vector_constructor.morpho create mode 100644 test/linalg/errors/complexmatrix_incompatible_dimensions.morpho create mode 100644 test/linalg/errors/complexmatrix_index_out_of_bounds.morpho create mode 100644 test/linalg/errors/complexmatrix_non_square_error.morpho create mode 100644 test/linalg/index/complexmatrix_getcolumn.morpho create mode 100644 test/linalg/index/complexmatrix_getindex.morpho create mode 100644 test/linalg/index/complexmatrix_setcolumn.morpho create mode 100644 test/linalg/index/complexmatrix_setindex.morpho create mode 100644 test/linalg/index/complexmatrix_setindex_real.morpho create mode 100644 test/linalg/index/complexmatrix_setslice.morpho create mode 100644 test/linalg/index/complexmatrix_slice.morpho create mode 100644 test/linalg/index/matrix_getcolumn.morpho create mode 100644 test/linalg/index/matrix_getindex.morpho create mode 100644 test/linalg/index/matrix_setcolumn.morpho create mode 100644 test/linalg/index/matrix_setindex.morpho create mode 100644 test/linalg/index/matrix_setslice.morpho create mode 100644 test/linalg/index/matrix_slice.morpho create mode 100644 test/linalg/index/matrix_slice_bounds.morpho create mode 100644 test/linalg/index/matrix_slice_infinite_range.morpho create mode 100644 test/linalg/methods/complexmatrix_conj.morpho create mode 100644 test/linalg/methods/complexmatrix_conjTranspose.morpho create mode 100644 test/linalg/methods/complexmatrix_count.morpho create mode 100644 test/linalg/methods/complexmatrix_dimensions.morpho create mode 100644 test/linalg/methods/complexmatrix_eigensystem.morpho create mode 100644 test/linalg/methods/complexmatrix_eigenvalues.morpho create mode 100644 test/linalg/methods/complexmatrix_enumerate.morpho create mode 100644 test/linalg/methods/complexmatrix_format.morpho create mode 100644 test/linalg/methods/complexmatrix_imag.morpho create mode 100644 test/linalg/methods/complexmatrix_inner.morpho create mode 100644 test/linalg/methods/complexmatrix_inverse.morpho create mode 100644 test/linalg/methods/complexmatrix_inverse_singular.morpho create mode 100644 test/linalg/methods/complexmatrix_norm.morpho create mode 100644 test/linalg/methods/complexmatrix_outer.morpho create mode 100644 test/linalg/methods/complexmatrix_qr.morpho create mode 100644 test/linalg/methods/complexmatrix_real.morpho create mode 100644 test/linalg/methods/complexmatrix_reshape.morpho create mode 100644 test/linalg/methods/complexmatrix_roll.morpho create mode 100644 test/linalg/methods/complexmatrix_roll_negative.morpho create mode 100644 test/linalg/methods/complexmatrix_sum.morpho create mode 100644 test/linalg/methods/complexmatrix_svd.morpho create mode 100644 test/linalg/methods/complexmatrix_trace.morpho create mode 100644 test/linalg/methods/complexmatrix_transpose.morpho create mode 100644 test/linalg/methods/matrix_count.morpho create mode 100644 test/linalg/methods/matrix_dimensions.morpho create mode 100644 test/linalg/methods/matrix_eigensystem.morpho create mode 100644 test/linalg/methods/matrix_eigenvalues.morpho create mode 100644 test/linalg/methods/matrix_enumerate.morpho create mode 100644 test/linalg/methods/matrix_format.morpho create mode 100644 test/linalg/methods/matrix_inner.morpho create mode 100644 test/linalg/methods/matrix_inverse.morpho create mode 100644 test/linalg/methods/matrix_inverse_singular.morpho create mode 100644 test/linalg/methods/matrix_norm.morpho create mode 100644 test/linalg/methods/matrix_outer.morpho create mode 100644 test/linalg/methods/matrix_qr.morpho create mode 100644 test/linalg/methods/matrix_reshape.morpho create mode 100644 test/linalg/methods/matrix_roll.morpho create mode 100644 test/linalg/methods/matrix_sum.morpho create mode 100644 test/linalg/methods/matrix_svd.morpho create mode 100644 test/linalg/methods/matrix_trace.morpho create mode 100644 test/linalg/methods/matrix_transpose.morpho diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index da46d1d0..acdabae8 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -843,7 +843,7 @@ value matrix_identityconstructor(vm *v, int nargs, value *args) { /** Prints a matrix */ value Matrix_print(vm *v, int nargs, value *args) { - if (!MORPHO_ISMATRIX(MORPHO_SELF(args))) return Object_print(v, nargs, args); + if (MORPHO_ISCLASS(MORPHO_SELF(args))) return Object_print(v, nargs, args); // Handle calls on the class objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); matrix_print(v, m); return MORPHO_NIL; diff --git a/test/linalg/arithmetic/complexmatrix_acc.morpho b/test/linalg/arithmetic/complexmatrix_acc.morpho new file mode 100644 index 00000000..850a1d90 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_acc.morpho @@ -0,0 +1,13 @@ +// In-place accumulate + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[0,1]=1-im +A[1,0]=1-im +A[1,1]=1+im + +A.acc(2,A) + +print A +// expect: [ 3 + 3im 3 - 3im ] +// expect: [ 3 - 3im 3 + 3im ] diff --git a/test/linalg/arithmetic/complexmatrix_add_complexmatrix.morpho b/test/linalg/arithmetic/complexmatrix_add_complexmatrix.morpho new file mode 100644 index 00000000..fe894b45 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_add_complexmatrix.morpho @@ -0,0 +1,7 @@ +// Add a complexmatrix to a complexmatrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) + +print A + A +// expect: [ 2 + 2im 4 + 4im ] +// expect: [ 6 + 6im 8 + 8im ] diff --git a/test/linalg/arithmetic/complexmatrix_add_matrix.morpho b/test/linalg/arithmetic/complexmatrix_add_matrix.morpho new file mode 100644 index 00000000..dbea7249 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_add_matrix.morpho @@ -0,0 +1,8 @@ +// Add a matrix to a complex matrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = Matrix(((1, 2), (3, 4))) + +print A + B +// expect: [ 2 + 1im 4 + 2im ] +// expect: [ 6 + 3im 8 + 4im ] diff --git a/test/linalg/arithmetic/complexmatrix_add_nil.morpho b/test/linalg/arithmetic/complexmatrix_add_nil.morpho new file mode 100644 index 00000000..13650933 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_add_nil.morpho @@ -0,0 +1,7 @@ +// Add a scalar + +var A = ComplexMatrix(2,2) + +print A + nil +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] diff --git a/test/linalg/arithmetic/complexmatrix_add_scalar.morpho b/test/linalg/arithmetic/complexmatrix_add_scalar.morpho new file mode 100644 index 00000000..0b0e440d --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_add_scalar.morpho @@ -0,0 +1,9 @@ +// Add a scalar + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[1,1]=1+im + +print A + 2 +// expect: [ 3 + 1im 2 + 0im ] +// expect: [ 2 + 0im 3 + 1im ] diff --git a/test/linalg/arithmetic/complexmatrix_addr_matrix.morpho b/test/linalg/arithmetic/complexmatrix_addr_matrix.morpho new file mode 100644 index 00000000..364dd703 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_addr_matrix.morpho @@ -0,0 +1,8 @@ +// Add a matrix to a complex matrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = Matrix(((1, 2), (3, 4))) + +print B + A +// expect: [ 2 + 1im 4 + 2im ] +// expect: [ 6 + 3im 8 + 4im ] diff --git a/test/linalg/arithmetic/complexmatrix_addr_nil.morpho b/test/linalg/arithmetic/complexmatrix_addr_nil.morpho new file mode 100644 index 00000000..d9c3edb9 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_addr_nil.morpho @@ -0,0 +1,7 @@ +// Add a scalar + +var A = ComplexMatrix(2,2) + +print nil + A +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] diff --git a/test/linalg/arithmetic/complexmatrix_div_complexmatrix.morpho b/test/linalg/arithmetic/complexmatrix_div_complexmatrix.morpho new file mode 100644 index 00000000..84246a80 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_div_complexmatrix.morpho @@ -0,0 +1,19 @@ +// Divide ComplexMatrix by ComplexMatrix (solve linear system) + +var A = ComplexMatrix(2,2) +A[0,0]=1 +A[0,1]=1-im +A[1,0]=1 +A[1,1]=1+1im + +var b = ComplexMatrix(2,1) +b[0,0]=1+1im +b[1,0]=2 + +print b / A +// expect: [ 2 + 1im ] +// expect: [ -0.5 - 0.5im ] + +print b +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] diff --git a/test/linalg/arithmetic/complexmatrix_div_matrix.morpho b/test/linalg/arithmetic/complexmatrix_div_matrix.morpho new file mode 100644 index 00000000..7fb130c5 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_div_matrix.morpho @@ -0,0 +1,13 @@ +// Divide ComplexMatrix by Matrix (solve linear system) + +var A = Matrix(((1,2),(-2,1))) + +var b = ComplexMatrix((1+im, 2)) + +print b / A +// expect: [ -0.6 + 0.2im ] +// expect: [ 0.8 + 0.4im ] + +print b +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] diff --git a/test/linalg/arithmetic/complexmatrix_div_scalar.morpho b/test/linalg/arithmetic/complexmatrix_div_scalar.morpho new file mode 100644 index 00000000..115ed9d5 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_div_scalar.morpho @@ -0,0 +1,10 @@ +// Divide ComplexMatrix by scalar + +var A = ComplexMatrix(2,2) +A[0,0]=2+2im +A[1,1]=4+4im + +print A / 2 +// expect: [ 1 + 1im 0 + 0im ] +// expect: [ 0 + 0im 2 + 2im ] + diff --git a/test/linalg/arithmetic/complexmatrix_divr_matrix.morpho b/test/linalg/arithmetic/complexmatrix_divr_matrix.morpho new file mode 100644 index 00000000..ca33e774 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_divr_matrix.morpho @@ -0,0 +1,9 @@ +// Divide Matrix by ComplexMatrix (solve linear system) + +var A = ComplexMatrix(((1,2+im),(2-im,1))) + +var b = Matrix((1, 2)) + +print b / A +// expect: [ 0.75 + 0.5im ] +// expect: [ 0 - 0.25im ] diff --git a/test/linalg/arithmetic/complexmatrix_mul_complex.morpho b/test/linalg/arithmetic/complexmatrix_mul_complex.morpho new file mode 100644 index 00000000..399b87d0 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_mul_complex.morpho @@ -0,0 +1,7 @@ +// Multiply ComplexMatrix by scalar + +var A = ComplexMatrix(((1,2),(3,4))) + +print A * (1+im) +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] diff --git a/test/linalg/arithmetic/complexmatrix_mul_complexmatrix.morpho b/test/linalg/arithmetic/complexmatrix_mul_complexmatrix.morpho new file mode 100644 index 00000000..3bf75db9 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_mul_complexmatrix.morpho @@ -0,0 +1,18 @@ +// Multiply two ComplexMatrices + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = ComplexMatrix(2,2) +B[0,0]=1 +B[0,1]=1im +B[1,0]=-1im +B[1,1]=1 + +print A * B +// expect: [ 3 - 1im 1 + 3im ] +// expect: [ 7 - 1im 1 + 7im ] + diff --git a/test/linalg/arithmetic/complexmatrix_mul_matrix.morpho b/test/linalg/arithmetic/complexmatrix_mul_matrix.morpho new file mode 100644 index 00000000..d7d862b8 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_mul_matrix.morpho @@ -0,0 +1,8 @@ +// Multiply two ComplexMatrices + +var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) +var B = Matrix(((4,3),(2,1))) + +print A * B +// expect: [ 8 + 8im 5 + 5im ] +// expect: [ 20 + 20im 13 + 13im ] diff --git a/test/linalg/arithmetic/complexmatrix_mul_scalar.morpho b/test/linalg/arithmetic/complexmatrix_mul_scalar.morpho new file mode 100644 index 00000000..d3d404ed --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_mul_scalar.morpho @@ -0,0 +1,10 @@ +// Multiply ComplexMatrix by scalar + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[1,1]=2+2im + +print A * 2 +// expect: [ 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 4 + 4im ] + diff --git a/test/linalg/arithmetic/complexmatrix_mulr_matrix.morpho b/test/linalg/arithmetic/complexmatrix_mulr_matrix.morpho new file mode 100644 index 00000000..35c26580 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_mulr_matrix.morpho @@ -0,0 +1,14 @@ +// Multiply two ComplexMatrices + +var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) +var B = Matrix(((4,3),(2,1))) + +print B * A +// expect: [ 13 + 13im 20 + 20im ] +// expect: [ 5 + 5im 8 + 8im ] + +var C = ComplexMatrix([[1+1im],[3+3im]]) + +print B * C +// expect: [ 13 + 13im ] +// expect: [ 5 + 5im ] diff --git a/test/linalg/arithmetic/complexmatrix_sub_complexmatrix.morpho b/test/linalg/arithmetic/complexmatrix_sub_complexmatrix.morpho new file mode 100644 index 00000000..9ad9e528 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_sub_complexmatrix.morpho @@ -0,0 +1,8 @@ +// Subtract a complexmatrix from a complexmatrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = ComplexMatrix(((4+4im, 3+3im), (2+2im, 1+1im))) + +print A - B +// expect: [ -3 - 3im -1 - 1im ] +// expect: [ 1 + 1im 3 + 3im ] diff --git a/test/linalg/arithmetic/complexmatrix_sub_matrix.morpho b/test/linalg/arithmetic/complexmatrix_sub_matrix.morpho new file mode 100644 index 00000000..f80d0e42 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_sub_matrix.morpho @@ -0,0 +1,8 @@ +// Subtract a matrix from a complexmatrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = Matrix(((4, 3), (2, 1))) + +print A - B +// expect: [ -3 + 1im -1 + 2im ] +// expect: [ 1 + 3im 3 + 4im ] diff --git a/test/linalg/arithmetic/complexmatrix_sub_scalar.morpho b/test/linalg/arithmetic/complexmatrix_sub_scalar.morpho new file mode 100644 index 00000000..bfc60320 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_sub_scalar.morpho @@ -0,0 +1,9 @@ +// Subtract a scalar + +var A = ComplexMatrix(2,2) +A[0,0]=2+2im +A[1,1]=2+2im + +print A - 2 +// expect: [ 0 + 2im -2 + 0im ] +// expect: [ -2 + 0im 0 + 2im ] diff --git a/test/linalg/arithmetic/complexmatrix_subr_matrix.morpho b/test/linalg/arithmetic/complexmatrix_subr_matrix.morpho new file mode 100644 index 00000000..17219a27 --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_subr_matrix.morpho @@ -0,0 +1,8 @@ +// Subtract a matrix from a complexmatrix + +var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) +var B = Matrix(((4, 3), (2, 1))) + +print B - A +// expect: [ 3 - 1im 1 - 2im ] +// expect: [ -1 - 3im -3 - 4im ] diff --git a/test/linalg/arithmetic/complexmatrix_subr_scalar.morpho b/test/linalg/arithmetic/complexmatrix_subr_scalar.morpho new file mode 100644 index 00000000..4ea9a1dd --- /dev/null +++ b/test/linalg/arithmetic/complexmatrix_subr_scalar.morpho @@ -0,0 +1,9 @@ +// Subtract a scalar + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[1,1]=1+im + +print 2 - A +// expect: [ 1 - 1im 2 + 0im ] +// expect: [ 2 + 0im 1 - 1im ] diff --git a/test/linalg/arithmetic/matrix_acc.morpho b/test/linalg/arithmetic/matrix_acc.morpho new file mode 100644 index 00000000..d00b5a96 --- /dev/null +++ b/test/linalg/arithmetic/matrix_acc.morpho @@ -0,0 +1,13 @@ +// In-place accumulate + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=1 +A[1,0]=1 +A[1,1]=1 + +A.acc(2,A) + +print A +// expect: [ 3 3 ] +// expect: [ 3 3 ] diff --git a/test/linalg/arithmetic/matrix_add_matrix.morpho b/test/linalg/arithmetic/matrix_add_matrix.morpho new file mode 100644 index 00000000..b52bd49b --- /dev/null +++ b/test/linalg/arithmetic/matrix_add_matrix.morpho @@ -0,0 +1,10 @@ +// Matrix arithmetic + +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) + +print "A+B:" +print a+b +// expect: A+B: +// expect: [ 1 3 ] +// expect: [ 4 4 ] diff --git a/test/linalg/arithmetic/matrix_add_nil.morpho b/test/linalg/arithmetic/matrix_add_nil.morpho new file mode 100644 index 00000000..d44a45f6 --- /dev/null +++ b/test/linalg/arithmetic/matrix_add_nil.morpho @@ -0,0 +1,7 @@ +// Add a scalar + +var A = Matrix(2,2) + +print A + nil +// expect: [ 0 0 ] +// expect: [ 0 0 ] diff --git a/test/linalg/arithmetic/matrix_add_scalar.morpho b/test/linalg/arithmetic/matrix_add_scalar.morpho new file mode 100644 index 00000000..01fed20d --- /dev/null +++ b/test/linalg/arithmetic/matrix_add_scalar.morpho @@ -0,0 +1,7 @@ +// Add a scalar + +var A = Matrix(2,2) + +print A + 2 +// expect: [ 2 2 ] +// expect: [ 2 2 ] diff --git a/test/linalg/arithmetic/matrix_addr_nil.morpho b/test/linalg/arithmetic/matrix_addr_nil.morpho new file mode 100644 index 00000000..b7c63e21 --- /dev/null +++ b/test/linalg/arithmetic/matrix_addr_nil.morpho @@ -0,0 +1,8 @@ +// Add nil from the right + +var A = Matrix(2,2) +A += 1 + +print nil + A +// expect: [ 1 1 ] +// expect: [ 1 1 ] diff --git a/test/linalg/arithmetic/matrix_addr_scalar.morpho b/test/linalg/arithmetic/matrix_addr_scalar.morpho new file mode 100644 index 00000000..7a543255 --- /dev/null +++ b/test/linalg/arithmetic/matrix_addr_scalar.morpho @@ -0,0 +1,7 @@ +// Add a scalar from the right + +var A = Matrix(2,2) + +print 2 + A +// expect: [ 2 2 ] +// expect: [ 2 2 ] diff --git a/test/linalg/arithmetic/matrix_div_matrix.morpho b/test/linalg/arithmetic/matrix_div_matrix.morpho new file mode 100644 index 00000000..731d9633 --- /dev/null +++ b/test/linalg/arithmetic/matrix_div_matrix.morpho @@ -0,0 +1,16 @@ +// Divide Matrix by Matrix (solve linear system) + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var b = Matrix(2,1) +b[0]=1 +b[1]=2 + +print b / A +// expect: [ 0 ] +// expect: [ 0.5 ] + diff --git a/test/linalg/arithmetic/matrix_div_scalar.morpho b/test/linalg/arithmetic/matrix_div_scalar.morpho new file mode 100644 index 00000000..56b9cb61 --- /dev/null +++ b/test/linalg/arithmetic/matrix_div_scalar.morpho @@ -0,0 +1,10 @@ +// Divide Matrix by scalar + +var A = Matrix(2,2) +A[0,0]=2 +A[1,1]=4 + +print A / 2 +// expect: [ 1 0 ] +// expect: [ 0 2 ] + diff --git a/test/linalg/arithmetic/matrix_mul_matrix.morpho b/test/linalg/arithmetic/matrix_mul_matrix.morpho new file mode 100644 index 00000000..24ff63ed --- /dev/null +++ b/test/linalg/arithmetic/matrix_mul_matrix.morpho @@ -0,0 +1,35 @@ +// Multiply two Matrices + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var B = Matrix(2,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=1 + +print A * B +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) + +print "A*B:" +print a*b +// expect: A*B: +// expect: [ 2 1 ] +// expect: [ 4 3 ] + +var c = Matrix([[1,2,3], [4,5,6]]) +var d = Matrix([[1,2], [3,4], [5,6]]) + +print "C*D:" +print c*d +// expect: C*D: +// expect: [ 22 28 ] +// expect: [ 49 64 ] diff --git a/test/linalg/arithmetic/matrix_mul_scalar.morpho b/test/linalg/arithmetic/matrix_mul_scalar.morpho new file mode 100644 index 00000000..3d7f6c9e --- /dev/null +++ b/test/linalg/arithmetic/matrix_mul_scalar.morpho @@ -0,0 +1,10 @@ +// Multiply Matrix by scalar + +var A = Matrix(2,2) +A[0,0]=1 +A[1,1]=2 + +print A * 2 +// expect: [ 2 0 ] +// expect: [ 0 4 ] + diff --git a/test/linalg/arithmetic/matrix_negate.morpho b/test/linalg/arithmetic/matrix_negate.morpho new file mode 100644 index 00000000..82fec405 --- /dev/null +++ b/test/linalg/arithmetic/matrix_negate.morpho @@ -0,0 +1,7 @@ +// Negate + +var a = Matrix([[1,2], [3,4]]) + +print -a +// expect: [ -1 -2 ] +// expect: [ -3 -4 ] diff --git a/test/linalg/arithmetic/matrix_sub_matrix.morpho b/test/linalg/arithmetic/matrix_sub_matrix.morpho new file mode 100644 index 00000000..571b9876 --- /dev/null +++ b/test/linalg/arithmetic/matrix_sub_matrix.morpho @@ -0,0 +1,12 @@ +// Matrix arithmetic + +var a = Matrix([[1, 2], [3, 4]]) +var b = Matrix([[0, 1], [1, 0]]) + + +print "A-B:" +print a-b +// expect: A-B: +// expect: [ 1 1 ] +// expect: [ 2 4 ] + diff --git a/test/linalg/arithmetic/matrix_sub_scalar.morpho b/test/linalg/arithmetic/matrix_sub_scalar.morpho new file mode 100644 index 00000000..c01149bb --- /dev/null +++ b/test/linalg/arithmetic/matrix_sub_scalar.morpho @@ -0,0 +1,7 @@ +// Subtract a scalar + +var A = Matrix(2,2) + +print A - 2 +// expect: [ -2 -2 ] +// expect: [ -2 -2 ] diff --git a/test/linalg/arithmetic/matrix_subr_scalar.morpho b/test/linalg/arithmetic/matrix_subr_scalar.morpho new file mode 100644 index 00000000..b12d6437 --- /dev/null +++ b/test/linalg/arithmetic/matrix_subr_scalar.morpho @@ -0,0 +1,9 @@ +// Subtract a scalar + +var A = Matrix(2,2) +A[0,0]=1 +A[1,1]=1 + +print 2 - A +// expect: [ 1 2 ] +// expect: [ 2 1 ] diff --git a/test/linalg/assign/complexmatrix_assign.morpho b/test/linalg/assign/complexmatrix_assign.morpho new file mode 100644 index 00000000..087bd5cd --- /dev/null +++ b/test/linalg/assign/complexmatrix_assign.morpho @@ -0,0 +1,15 @@ +// Assign one ComplexMatrix to another + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +var B = ComplexMatrix(2,2) + +B.assign(A) + +print B +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] diff --git a/test/linalg/assign/complexmatrix_clone.morpho b/test/linalg/assign/complexmatrix_clone.morpho new file mode 100644 index 00000000..2bc18f9f --- /dev/null +++ b/test/linalg/assign/complexmatrix_clone.morpho @@ -0,0 +1,18 @@ +// Clone a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = A.clone() + +// Modify original +A[0,0]=9+9im + +// Clone should be unchanged +print B +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + diff --git a/test/linalg/assign/matrix_assign.morpho b/test/linalg/assign/matrix_assign.morpho new file mode 100644 index 00000000..ee4d5ecd --- /dev/null +++ b/test/linalg/assign/matrix_assign.morpho @@ -0,0 +1,18 @@ +// Assign one matrix to another + +var A = Matrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +var B = Matrix(2,2) +B.assign(A) + +print B +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +var C = Matrix(1,2) +B.assign(C) +// expect error 'LnAlgMtrxIncmptbl' diff --git a/test/linalg/constructors/complexmatrix_array_constructor.morpho b/test/linalg/constructors/complexmatrix_array_constructor.morpho new file mode 100644 index 00000000..949aadaa --- /dev/null +++ b/test/linalg/constructors/complexmatrix_array_constructor.morpho @@ -0,0 +1,13 @@ +// Create a Matrix from an Array + +var a[2,2] +a[0,0]=1+im +a[1,0]=2-2im +a[0,1]=3+3im +a[1,1]=4+4im + +var A = ComplexMatrix(a) + +print A +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 2 - 2im 4 + 4im ] diff --git a/test/linalg/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho b/test/linalg/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho new file mode 100644 index 00000000..6a6ba5fb --- /dev/null +++ b/test/linalg/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho @@ -0,0 +1,11 @@ +// ComplexMatrix constructor from Array with invalid dimensions + +// Try to construct from a 1D array (should fail - requires 2D) +var a[4] +a[0] = 1 +a[1] = 2 +a[2] = 3 +a[3] = 4 + +print ComplexMatrix(a) +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/linalg/constructors/complexmatrix_constructor.morpho b/test/linalg/constructors/complexmatrix_constructor.morpho new file mode 100644 index 00000000..8723c996 --- /dev/null +++ b/test/linalg/constructors/complexmatrix_constructor.morpho @@ -0,0 +1,8 @@ +// Create a ComplexMatrix + +var A = ComplexMatrix(2,2) + +print A +// expect: [ 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im ] + diff --git a/test/linalg/constructors/complexmatrix_constructor_edge_cases.morpho b/test/linalg/constructors/complexmatrix_constructor_edge_cases.morpho new file mode 100644 index 00000000..84a1a761 --- /dev/null +++ b/test/linalg/constructors/complexmatrix_constructor_edge_cases.morpho @@ -0,0 +1,47 @@ +// ComplexMatrix constructor edge cases + +// Zero dimension matrix (0x0) +var A = ComplexMatrix(0, 0) +print A.dimensions() +// expect: (0, 0) +print A.count() +// expect: 0 + +// Zero rows, non-zero columns +var B = ComplexMatrix(0, 3) +print B.dimensions() +// expect: (0, 3) +print B.count() +// expect: 0 + +// Non-zero rows, zero columns +var C = ComplexMatrix(3, 0) +print C.dimensions() +// expect: (3, 0) +print C.count() +// expect: 0 + +// Single element matrix (1x1) +var D = ComplexMatrix(1, 1) +D[0,0] = 42+10im +print D +// expect: [ 42 + 10im ] + +// Single row matrix (1xN) +var E = ComplexMatrix(1, 3) +E[0,0] = 1+im +E[0,1] = 2+2im +E[0,2] = 3+3im +print E +// expect: [ 1 + 1im 2 + 2im 3 + 3im ] + +// Single column matrix (Nx1) +var F = ComplexMatrix(3, 1) +F[0,0] = 1+im +F[1,0] = 2+2im +F[2,0] = 3+3im +print F +// expect: [ 1 + 1im ] +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] + diff --git a/test/linalg/constructors/complexmatrix_constructor_invalid_args.morpho b/test/linalg/constructors/complexmatrix_constructor_invalid_args.morpho new file mode 100644 index 00000000..9e7e894a --- /dev/null +++ b/test/linalg/constructors/complexmatrix_constructor_invalid_args.morpho @@ -0,0 +1,5 @@ +// ComplexMatrix constructor with invalid arguments + +// Try to construct with invalid argument types +print ComplexMatrix("invalid") +// expect error 'MltplDsptchFld' diff --git a/test/linalg/constructors/complexmatrix_list_constructor.morpho b/test/linalg/constructors/complexmatrix_list_constructor.morpho new file mode 100644 index 00000000..7857d52d --- /dev/null +++ b/test/linalg/constructors/complexmatrix_list_constructor.morpho @@ -0,0 +1,7 @@ +// Create a ComplexMatrix from a List of Lists + +var A = ComplexMatrix([[1+im,2-2im],[3+3im,4-4im]]) + +print A +// expect: [ 1 + 1im 2 - 2im ] +// expect: [ 3 + 3im 4 - 4im ] diff --git a/test/linalg/constructors/complexmatrix_list_vector_constructor.morpho b/test/linalg/constructors/complexmatrix_list_vector_constructor.morpho new file mode 100644 index 00000000..1e1cd1a7 --- /dev/null +++ b/test/linalg/constructors/complexmatrix_list_vector_constructor.morpho @@ -0,0 +1,16 @@ +// Create a ComplexMatrix from a List of Values + +var A = ComplexMatrix([1+im, 2-2im, 3+3im, 4-4im]) + +print A +// expect: [ 1 + 1im ] +// expect: [ 2 - 2im ] +// expect: [ 3 + 3im ] +// expect: [ 4 - 4im ] + +var B = ComplexMatrix(((1+im), (2), (3), (4-4im))) +print B +// expect: [ 1 + 1im ] +// expect: [ 2 + 0im ] +// expect: [ 3 + 0im ] +// expect: [ 4 - 4im ] diff --git a/test/linalg/constructors/complexmatrix_matrix_constructor.morpho b/test/linalg/constructors/complexmatrix_matrix_constructor.morpho new file mode 100644 index 00000000..fbb03772 --- /dev/null +++ b/test/linalg/constructors/complexmatrix_matrix_constructor.morpho @@ -0,0 +1,9 @@ +// Create a Matrix from an Array + +var A = Matrix(((1,2), (3,4))) + +var B = ComplexMatrix(A) + +print B +// expect: [ 1 + 0im 2 + 0im ] +// expect: [ 3 + 0im 4 + 0im ] diff --git a/test/linalg/constructors/complexmatrix_tuple_column_constructor.morpho b/test/linalg/constructors/complexmatrix_tuple_column_constructor.morpho new file mode 100644 index 00000000..9a8eca72 --- /dev/null +++ b/test/linalg/constructors/complexmatrix_tuple_column_constructor.morpho @@ -0,0 +1,7 @@ +// Create a column vector from a list of tuples + +var C = ComplexMatrix(((1+1im),(3+3im))) + +print C +// expect: [ 1 + 1im ] +// expect: [ 3 + 3im ] diff --git a/test/linalg/constructors/complexmatrix_tuple_constructor.morpho b/test/linalg/constructors/complexmatrix_tuple_constructor.morpho new file mode 100644 index 00000000..10bbd9fa --- /dev/null +++ b/test/linalg/constructors/complexmatrix_tuple_constructor.morpho @@ -0,0 +1,7 @@ +// Create a ComplexMatrix from a List of Lists + +var A = ComplexMatrix(((1+im,2-2im),(3+3im,4-4im))) + +print A +// expect: [ 1 + 1im 2 - 2im ] +// expect: [ 3 + 3im 4 - 4im ] diff --git a/test/linalg/constructors/complexmatrix_vector_constructor.morpho b/test/linalg/constructors/complexmatrix_vector_constructor.morpho new file mode 100644 index 00000000..4d83b2af --- /dev/null +++ b/test/linalg/constructors/complexmatrix_vector_constructor.morpho @@ -0,0 +1,8 @@ +// Create a ComplexMatrix column vector + +var A = ComplexMatrix(2) + +print A +// expect: [ 0 + 0im ] +// expect: [ 0 + 0im ] + diff --git a/test/linalg/constructors/matrix_array_constructor.morpho b/test/linalg/constructors/matrix_array_constructor.morpho new file mode 100644 index 00000000..08e97a0f --- /dev/null +++ b/test/linalg/constructors/matrix_array_constructor.morpho @@ -0,0 +1,14 @@ +// Create a Matrix from an Array + +var a[2,2] +a[0,0]=1 +a[1,0]=3 +a[0,1]=2 +a[1,1]=4 + +var A = Matrix(a) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + diff --git a/test/linalg/constructors/matrix_array_constructor_invalid_dimensions.morpho b/test/linalg/constructors/matrix_array_constructor_invalid_dimensions.morpho new file mode 100644 index 00000000..4a9abbfc --- /dev/null +++ b/test/linalg/constructors/matrix_array_constructor_invalid_dimensions.morpho @@ -0,0 +1,11 @@ +// Matrix constructor from Array with invalid dimensions + +// Try to construct from a 1D array (should fail - requires 2D) +var a[4] +a[0] = 1 +a[1] = 2 +a[2] = 3 +a[3] = 4 + +print Matrix(a) +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/linalg/constructors/matrix_constructor.morpho b/test/linalg/constructors/matrix_constructor.morpho new file mode 100644 index 00000000..5d35ef53 --- /dev/null +++ b/test/linalg/constructors/matrix_constructor.morpho @@ -0,0 +1,8 @@ +// Create a Matrix + +var A = Matrix(2,2) + +print A +// expect: [ 0 0 ] +// expect: [ 0 0 ] + diff --git a/test/linalg/constructors/matrix_constructor_edge_cases.morpho b/test/linalg/constructors/matrix_constructor_edge_cases.morpho new file mode 100644 index 00000000..d0810cdb --- /dev/null +++ b/test/linalg/constructors/matrix_constructor_edge_cases.morpho @@ -0,0 +1,47 @@ +// Matrix constructor edge cases + +// Zero dimension matrix (0x0) +var A = Matrix(0, 0) +print A.dimensions() +// expect: (0, 0) +print A.count() +// expect: 0 + +// Zero rows, non-zero columns +var B = Matrix(0, 3) +print B.dimensions() +// expect: (0, 3) +print B.count() +// expect: 0 + +// Non-zero rows, zero columns +var C = Matrix(3, 0) +print C.dimensions() +// expect: (3, 0) +print C.count() +// expect: 0 + +// Single element matrix (1x1) +var D = Matrix(1, 1) +D[0,0] = 42 +print D +// expect: [ 42 ] + +// Single row matrix (1xN) +var E = Matrix(1, 3) +E[0,0] = 1 +E[0,1] = 2 +E[0,2] = 3 +print E +// expect: [ 1 2 3 ] + +// Single column matrix (Nx1) +var F = Matrix(3, 1) +F[0,0] = 1 +F[1,0] = 2 +F[2,0] = 3 +print F +// expect: [ 1 ] +// expect: [ 2 ] +// expect: [ 3 ] + diff --git a/test/linalg/constructors/matrix_identity_constructor.morpho b/test/linalg/constructors/matrix_identity_constructor.morpho new file mode 100644 index 00000000..155ff8bc --- /dev/null +++ b/test/linalg/constructors/matrix_identity_constructor.morpho @@ -0,0 +1,12 @@ +// IdentityMatrix constructor + +var I = IdentityMatrix(3) + +print I +// expect: [ 1 0 0 ] +// expect: [ 0 1 0 ] +// expect: [ 0 0 1 ] + +var I2 = IdentityMatrix(1) +print I2 +// expect: [ 1 ] diff --git a/test/linalg/constructors/matrix_list_constructor.morpho b/test/linalg/constructors/matrix_list_constructor.morpho new file mode 100644 index 00000000..edb28f03 --- /dev/null +++ b/test/linalg/constructors/matrix_list_constructor.morpho @@ -0,0 +1,7 @@ +// Create a Matrix from a List of Lists + +var A = Matrix([[1,2],[3,4]]) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/linalg/constructors/matrix_list_vector_constructor.morpho b/test/linalg/constructors/matrix_list_vector_constructor.morpho new file mode 100644 index 00000000..802efd43 --- /dev/null +++ b/test/linalg/constructors/matrix_list_vector_constructor.morpho @@ -0,0 +1,7 @@ +// Create a column vector from a list of tuples + +var C = Matrix(((1),(2))) + +print C +// expect: [ 1 ] +// expect: [ 2 ] diff --git a/test/linalg/constructors/matrix_tuple_constructor.morpho b/test/linalg/constructors/matrix_tuple_constructor.morpho new file mode 100644 index 00000000..5b18ceb8 --- /dev/null +++ b/test/linalg/constructors/matrix_tuple_constructor.morpho @@ -0,0 +1,14 @@ +// Create a Matrix from a Tuple of Tuples + +var A = Matrix(((1,2),(3,4))) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +// Mix Tuples and Lists +var B = Matrix(([1,2],[3,4])) + +print B +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/linalg/constructors/matrix_vector_constructor.morpho b/test/linalg/constructors/matrix_vector_constructor.morpho new file mode 100644 index 00000000..a82c4f36 --- /dev/null +++ b/test/linalg/constructors/matrix_vector_constructor.morpho @@ -0,0 +1,7 @@ +// Create a Matrix + +var A = Matrix(2) + +print A +// expect: [ 0 ] +// expect: [ 0 ] diff --git a/test/linalg/constructors/vector_constructor.morpho b/test/linalg/constructors/vector_constructor.morpho new file mode 100644 index 00000000..2d5c07bc --- /dev/null +++ b/test/linalg/constructors/vector_constructor.morpho @@ -0,0 +1,8 @@ +// Create a column vector + +var A = Matrix(2) + +print A +// expect: [ 0 ] +// expect: [ 0 ] + diff --git a/test/linalg/errors/complexmatrix_incompatible_dimensions.morpho b/test/linalg/errors/complexmatrix_incompatible_dimensions.morpho new file mode 100644 index 00000000..ab1e19d2 --- /dev/null +++ b/test/linalg/errors/complexmatrix_incompatible_dimensions.morpho @@ -0,0 +1,12 @@ +// Incompatible dimensions error + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im + +var B = ComplexMatrix(3,3) +B[0,0]=1+1im + +// Try to add incompatible matrices +print A + B +// expect error 'LnAlgMtrxIncmptbl' + diff --git a/test/linalg/errors/complexmatrix_index_out_of_bounds.morpho b/test/linalg/errors/complexmatrix_index_out_of_bounds.morpho new file mode 100644 index 00000000..56f30644 --- /dev/null +++ b/test/linalg/errors/complexmatrix_index_out_of_bounds.morpho @@ -0,0 +1,9 @@ +// Index out of bounds error + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im + +// Try to access out of bounds +print A[5,5] +// expect error 'LnAlgMtrxIndxBnds' + diff --git a/test/linalg/errors/complexmatrix_non_square_error.morpho b/test/linalg/errors/complexmatrix_non_square_error.morpho new file mode 100644 index 00000000..dd526a45 --- /dev/null +++ b/test/linalg/errors/complexmatrix_non_square_error.morpho @@ -0,0 +1,9 @@ +// Non-square matrix err. (for operations requiring square matrices) + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im + +// Try trace on non-square matrix +print A.trace() +// expect error 'LnAlgMtrxNtSq' + diff --git a/test/linalg/index/complexmatrix_getcolumn.morpho b/test/linalg/index/complexmatrix_getcolumn.morpho new file mode 100644 index 00000000..b8b74afa --- /dev/null +++ b/test/linalg/index/complexmatrix_getcolumn.morpho @@ -0,0 +1,17 @@ +// Get columns of a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +print A.column(0) +// expect: [ 1 + 1im ] +// expect: [ 3 + 3im ] + +print A.column(1) +// expect: [ 2 + 2im ] +// expect: [ 4 + 4im ] + +print A.column(2) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/complexmatrix_getindex.morpho b/test/linalg/index/complexmatrix_getindex.morpho new file mode 100644 index 00000000..23069538 --- /dev/null +++ b/test/linalg/index/complexmatrix_getindex.morpho @@ -0,0 +1,19 @@ +// Get elements of a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0] = 1+1im +A[1,0] = 2+2im +A[0,1] = 3+3im +A[1,1] = 4+4im + +// Array-like access +print A[0,0] // expect: 1 + 1im +print A[1,0] // expect: 2 + 2im +print A[0,1] // expect: 3 + 3im +print A[1,1] // expect: 4 + 4im + +// Vector-like access +print A[0] // expect: 1 + 1im +print A[1] // expect: 2 + 2im +print A[2] // expect: 3 + 3im +print A[3] // expect: 4 + 4im diff --git a/test/linalg/index/complexmatrix_setcolumn.morpho b/test/linalg/index/complexmatrix_setcolumn.morpho new file mode 100644 index 00000000..71cd496a --- /dev/null +++ b/test/linalg/index/complexmatrix_setcolumn.morpho @@ -0,0 +1,20 @@ +// Set columns of a Matrix + +var A = ComplexMatrix(2,2) + +var b = ComplexMatrix(2,1) +b[0] = 1+1im +b[1] = 3+3im + +var c = ComplexMatrix(2,1) +c[0] = 2+2im +c[1] = 4+4im + +A.setColumn(0,b) +A.setColumn(1,c) + +print A +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + +print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/complexmatrix_setindex.morpho b/test/linalg/index/complexmatrix_setindex.morpho new file mode 100644 index 00000000..50fac8e2 --- /dev/null +++ b/test/linalg/index/complexmatrix_setindex.morpho @@ -0,0 +1,19 @@ +// Set elements of a ComplexMatrix + +var A = ComplexMatrix(2,2) + +// Set using two indices +A[0,0] = 1+1im +A[0,1] = 2+2im +A[1,0] = 3+3im +A[1,1] = 4+4im + +print A +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im ] + +// Set using single index (vector-like) +A[0] = 5+5im +print A[0,0] +// expect: 5 + 5im + diff --git a/test/linalg/index/complexmatrix_setindex_real.morpho b/test/linalg/index/complexmatrix_setindex_real.morpho new file mode 100644 index 00000000..775b9e55 --- /dev/null +++ b/test/linalg/index/complexmatrix_setindex_real.morpho @@ -0,0 +1,14 @@ +// Set elements of a ComplexMatrix with mixture of Complex and Real args + +var A = ComplexMatrix(2,2) + +// Set using two indices +A[0,0] = 1+im // Make sure imag part is zero'd out +A[0,0] = 1 +A[0,1] = 2+2im +A[1,0] = 3.0 +A[1,1] = 4+4im + +print A +// expect: [ 1 + 0im 2 + 2im ] +// expect: [ 3 + 0im 4 + 4im ] diff --git a/test/linalg/index/complexmatrix_setslice.morpho b/test/linalg/index/complexmatrix_setslice.morpho new file mode 100644 index 00000000..fc67163e --- /dev/null +++ b/test/linalg/index/complexmatrix_setslice.morpho @@ -0,0 +1,49 @@ +// Copy elements of a ComplexMatrix using slices + +var A = ComplexMatrix(((1+1im,2+2im),(3+3im,4+4im))) + +var B = ComplexMatrix(4,4) + +B[0..1, 0..1] = A +print B +// expect: [ 1 + 1im 2 + 2im 0 + 0im 0 + 0im ] +// expect: [ 3 + 3im 4 + 4im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var C = ComplexMatrix(4,4) +C[0..2:2, 0..2:2] = A +print C +// expect: [ 1 + 1im 0 + 0im 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 3 + 3im 0 + 0im 4 + 4im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var D = ComplexMatrix(4,4) +D[1..2, 1..2] = A +print D +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 1 + 1im 2 + 2im 0 + 0im ] +// expect: [ 0 + 0im 3 + 3im 4 + 4im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +var E = ComplexMatrix(4,4) +E[1..3:2, 1..3:2] = A +print E +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 1 + 1im 0 + 0im 2 + 2im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 3 + 3im 0 + 0im 4 + 4im ] + +var F = ComplexMatrix(4,4) +F[0..1, 0] = A[0..1, 1] +print F +// expect: [ 2 + 2im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 4 + 4im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] +// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] + +B[0..5, 0..5] = A +print B +// expect error 'LnAlgMtrxIndxBnds' + diff --git a/test/linalg/index/complexmatrix_slice.morpho b/test/linalg/index/complexmatrix_slice.morpho new file mode 100644 index 00000000..813ca13b --- /dev/null +++ b/test/linalg/index/complexmatrix_slice.morpho @@ -0,0 +1,24 @@ +// Slice a ComplexMatrix + +var A = ComplexMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16)))*(1+1im) + +print A[0..1, 0..1] +// expect: [ 1 + 1im 2 + 2im ] +// expect: [ 5 + 5im 6 + 6im ] + +print A[0..2, 0] +// expect: [ 1 + 1im ] +// expect: [ 5 + 5im ] +// expect: [ 9 + 9im ] + +print A[2..0:-1, 0] +// expect: [ 9 + 9im ] +// expect: [ 5 + 5im ] +// expect: [ 1 + 1im ] + +print A[0..3:2, 0..3:2] +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 9 + 9im 11 + 11im ] + +print A[0..1:2, "Foo"] +// expect error 'LnAlgMtrxNnNmrclArg' diff --git a/test/linalg/index/matrix_getcolumn.morpho b/test/linalg/index/matrix_getcolumn.morpho new file mode 100644 index 00000000..a064f70b --- /dev/null +++ b/test/linalg/index/matrix_getcolumn.morpho @@ -0,0 +1,17 @@ +// Get columns of a Matrix + +var A = Matrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +print A.column(0) +// expect: [ 1 ] +// expect: [ 3 ] + +print A.column(1) +// expect: [ 2 ] +// expect: [ 4 ] + +print A.column(2) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/matrix_getindex.morpho b/test/linalg/index/matrix_getindex.morpho new file mode 100644 index 00000000..d32c767d --- /dev/null +++ b/test/linalg/index/matrix_getindex.morpho @@ -0,0 +1,19 @@ +// Get elements of a Matrix + +var A = Matrix(2,2) +A[0,0] = 1 +A[1,0] = 2 +A[0,1] = 3 +A[1,1] = 4 + +// Array-like access +print A[0,0] // expect: 1 +print A[1,0] // expect: 2 +print A[0,1] // expect: 3 +print A[1,1] // expect: 4 + +// Vector-like access +print A[0] // expect: 1 +print A[1] // expect: 2 +print A[2] // expect: 3 +print A[3] // expect: 4 diff --git a/test/linalg/index/matrix_setcolumn.morpho b/test/linalg/index/matrix_setcolumn.morpho new file mode 100644 index 00000000..7a82bf3e --- /dev/null +++ b/test/linalg/index/matrix_setcolumn.morpho @@ -0,0 +1,20 @@ +// Set columns of a Matrix + +var A = Matrix(2,2) + +var b = Matrix(2,1) +b[0] = 1 +b[1] = 3 + +var c = Matrix(2,1) +c[0] = 2 +c[1] = 4 + +A.setColumn(0,b) +A.setColumn(1,c) + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] + +print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/matrix_setindex.morpho b/test/linalg/index/matrix_setindex.morpho new file mode 100644 index 00000000..f657f348 --- /dev/null +++ b/test/linalg/index/matrix_setindex.morpho @@ -0,0 +1,11 @@ +// Set elements of a Matrix + +var A = Matrix(2,2) +A[0,0] = 1 +A[0,1] = 2 +A[1,0] = 3 +A[1,1] = 4 + +print A +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/linalg/index/matrix_setslice.morpho b/test/linalg/index/matrix_setslice.morpho new file mode 100644 index 00000000..0eb54497 --- /dev/null +++ b/test/linalg/index/matrix_setslice.morpho @@ -0,0 +1,48 @@ +// Copy elements of a Matrix using slices + +var A = Matrix(((1,2),(3,4))) + +var B = Matrix(4,4) + +B[0..1, 0..1] = A +print B +// expect: [ 1 2 0 0 ] +// expect: [ 3 4 0 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 0 0 0 ] + +var C = Matrix(4,4) +C[0..2:2, 0..2:2] = A +print C +// expect: [ 1 0 2 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 3 0 4 0 ] +// expect: [ 0 0 0 0 ] + +var D = Matrix(4,4) +D[1..2, 1..2] = A +print D +// expect: [ 0 0 0 0 ] +// expect: [ 0 1 2 0 ] +// expect: [ 0 3 4 0 ] +// expect: [ 0 0 0 0 ] + +var E = Matrix(4,4) +E[1..3:2, 1..3:2] = A +print E +// expect: [ 0 0 0 0 ] +// expect: [ 0 1 0 2 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 3 0 4 ] + +var F = Matrix(4,4) +F[0..1, 0] = A[0..1, 1] +print F +// expect: [ 2 0 0 0 ] +// expect: [ 4 0 0 0 ] +// expect: [ 0 0 0 0 ] +// expect: [ 0 0 0 0 ] + +B[0..5, 0..5] = A +print B +// expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/matrix_slice.morpho b/test/linalg/index/matrix_slice.morpho new file mode 100644 index 00000000..27d1aec7 --- /dev/null +++ b/test/linalg/index/matrix_slice.morpho @@ -0,0 +1,24 @@ +// Slice a Matrix + +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..1, 0..1] +// expect: [ 1 2 ] +// expect: [ 5 6 ] + +print A[0..2, 0] +// expect: [ 1 ] +// expect: [ 5 ] +// expect: [ 9 ] + +print A[2..0:-1, 0] +// expect: [ 9 ] +// expect: [ 5 ] +// expect: [ 1 ] + +print A[0..3:2, 0..3:2] +// expect: [ 1 3 ] +// expect: [ 9 11 ] + +print A[0..1:2, "Foo"] +// expect error 'LnAlgMtrxNnNmrclArg' diff --git a/test/linalg/index/matrix_slice_bounds.morpho b/test/linalg/index/matrix_slice_bounds.morpho new file mode 100644 index 00000000..f0bce0a7 --- /dev/null +++ b/test/linalg/index/matrix_slice_bounds.morpho @@ -0,0 +1,6 @@ +// Slice a Matrix out of bounds + +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..5, 0..2] +// expect error 'LnAlgMtrxIndxBnds' diff --git a/test/linalg/index/matrix_slice_infinite_range.morpho b/test/linalg/index/matrix_slice_infinite_range.morpho new file mode 100644 index 00000000..63c2bf84 --- /dev/null +++ b/test/linalg/index/matrix_slice_infinite_range.morpho @@ -0,0 +1,6 @@ +// Slice a Matrix with a range that doesn't halt + +var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) + +print A[0..3:-1, 0] +// expect error 'LnAlgMtrxInvldArg' diff --git a/test/linalg/methods/complexmatrix_conj.morpho b/test/linalg/methods/complexmatrix_conj.morpho new file mode 100644 index 00000000..c02d0f8c --- /dev/null +++ b/test/linalg/methods/complexmatrix_conj.morpho @@ -0,0 +1,11 @@ +// Conjugate of a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.conj() +// expect: [ 1 - 4im 2 - 3im ] +// expect: [ 3 - 2im 4 - 1im ] diff --git a/test/linalg/methods/complexmatrix_conjTranspose.morpho b/test/linalg/methods/complexmatrix_conjTranspose.morpho new file mode 100644 index 00000000..d1e1b836 --- /dev/null +++ b/test/linalg/methods/complexmatrix_conjTranspose.morpho @@ -0,0 +1,21 @@ +// Conjugate of a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +var B=A.conjTranspose() +print B +// expect: [ 1 - 4im 3 - 2im ] +// expect: [ 2 - 3im 4 - 1im ] + +for (ev in A.eigenvalues()) print isnumber(ev) +// expect: false +// expect: false + +var C=A+B // create a hermitian matrix +for (ev in C.eigenvalues()) print isnumber(ev) +// expect: true +// expect: true diff --git a/test/linalg/methods/complexmatrix_count.morpho b/test/linalg/methods/complexmatrix_count.morpho new file mode 100644 index 00000000..ce77d224 --- /dev/null +++ b/test/linalg/methods/complexmatrix_count.morpho @@ -0,0 +1,13 @@ +// Count elements in ComplexMatrix + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im +A[0,1]=2+2im +A[0,2]=3+3im +A[1,0]=4+4im +A[1,1]=5+5im +A[1,2]=6+6im + +print A.count() +// expect: 6 + diff --git a/test/linalg/methods/complexmatrix_dimensions.morpho b/test/linalg/methods/complexmatrix_dimensions.morpho new file mode 100644 index 00000000..123adf13 --- /dev/null +++ b/test/linalg/methods/complexmatrix_dimensions.morpho @@ -0,0 +1,8 @@ +// Get dimensions of ComplexMatrix + +var A = ComplexMatrix(2,3) +A[0,0]=1+1im + +print A.dimensions() +// expect: (2, 3) + diff --git a/test/linalg/methods/complexmatrix_eigensystem.morpho b/test/linalg/methods/complexmatrix_eigensystem.morpho new file mode 100644 index 00000000..ffd0b63d --- /dev/null +++ b/test/linalg/methods/complexmatrix_eigensystem.morpho @@ -0,0 +1,24 @@ +// Eigenvalues and eigenvectors + +var A = ComplexMatrix(2,2) +A[0,0]=0im +A[0,1]=im +A[1,0]=im +A[1,1]=0im + +var es=A.eigensystem() +print es +// expect: ((0 + 1im, 0 - 1im), ) + +print es[0] +// expect: (0 + 1im, 0 - 1im) + +// Compare to analytical eigenvectors +var v = ComplexMatrix(2,2) +v[0,0]=sqrt(2)/2 +v[1,0]=sqrt(2)/2 +v[0,1]=sqrt(2)/2 +v[1,1]=-sqrt(2)/2 + +print abs((es[1]-v).sum()) < 1e-15 +// expect: true diff --git a/test/linalg/methods/complexmatrix_eigenvalues.morpho b/test/linalg/methods/complexmatrix_eigenvalues.morpho new file mode 100644 index 00000000..74f858dc --- /dev/null +++ b/test/linalg/methods/complexmatrix_eigenvalues.morpho @@ -0,0 +1,10 @@ +// Eigenvalues + +var A = ComplexMatrix(2,2) +A[0,0]=0+0im +A[0,1]=im +A[1,0]=im +A[1,1]=0+0im + +print A.eigenvalues() +// expect: (0 + 1im, 0 - 1im) diff --git a/test/linalg/methods/complexmatrix_enumerate.morpho b/test/linalg/methods/complexmatrix_enumerate.morpho new file mode 100644 index 00000000..dcce1447 --- /dev/null +++ b/test/linalg/methods/complexmatrix_enumerate.morpho @@ -0,0 +1,13 @@ +// Enumerate elements of a matrix + +var A = ComplexMatrix(2,2) +A[0,0] = 1+im +A[0,1] = 0+0im +A[1,0] = 0+0im +A[1,1] = 1-im + +for (x in A) print x +// expect: 1 + 1im +// expect: 0 + 0im +// expect: 0 + 0im +// expect: 1 - 1im diff --git a/test/linalg/methods/complexmatrix_format.morpho b/test/linalg/methods/complexmatrix_format.morpho new file mode 100644 index 00000000..32d32dd9 --- /dev/null +++ b/test/linalg/methods/complexmatrix_format.morpho @@ -0,0 +1,12 @@ +// Format +import constants + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=exp(im*Pi/4) +A[1,0]=exp(-im*Pi/4) +A[1,1]=-1.5*(1+1im) + +print A.format("%5.2f") +// expect: [ 1.00 + 1.00im 0.71 + 0.71im ] +// expect: [ 0.71 - 0.71im -1.50 - 1.50im ] diff --git a/test/linalg/methods/complexmatrix_imag.morpho b/test/linalg/methods/complexmatrix_imag.morpho new file mode 100644 index 00000000..26afc044 --- /dev/null +++ b/test/linalg/methods/complexmatrix_imag.morpho @@ -0,0 +1,11 @@ +// Inner product of ComplexMatrices (Frobenius inner product with conjugation) + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.imag() +// expect: [ 4 3 ] +// expect: [ 2 1 ] diff --git a/test/linalg/methods/complexmatrix_inner.morpho b/test/linalg/methods/complexmatrix_inner.morpho new file mode 100644 index 00000000..68150dd5 --- /dev/null +++ b/test/linalg/methods/complexmatrix_inner.morpho @@ -0,0 +1,16 @@ +// Inner product of ComplexMatrices (Frobenius inner product with conjugation) + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im + +var B = ComplexMatrix(2,2) +B[0,0]=1 +B[0,1]=1im +B[1,0]=-1im +B[1,1]=1 + +print A.inner(B) +// expect: 4 - 6im diff --git a/test/linalg/methods/complexmatrix_inverse.morpho b/test/linalg/methods/complexmatrix_inverse.morpho new file mode 100644 index 00000000..d6de0b08 --- /dev/null +++ b/test/linalg/methods/complexmatrix_inverse.morpho @@ -0,0 +1,11 @@ +// Inverse + +var A = ComplexMatrix(2,2) +A[0,0]=0+0im +A[0,1]=1+im +A[1,0]=1-im +A[1,1]=0+0im + +print A.inverse() +// expect: [ 0 + 0im 0.5 + 0.5im ] +// expect: [ 0.5 - 0.5im 0 + 0im ] diff --git a/test/linalg/methods/complexmatrix_inverse_singular.morpho b/test/linalg/methods/complexmatrix_inverse_singular.morpho new file mode 100644 index 00000000..49b34a86 --- /dev/null +++ b/test/linalg/methods/complexmatrix_inverse_singular.morpho @@ -0,0 +1,11 @@ +// Inverse of singular ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+0im +A[0,1]=2+0im +A[1,0]=2+0im +A[1,1]=4+0im + +print A.inverse() +// expect error 'LnAlgMtrxSnglr' + diff --git a/test/linalg/methods/complexmatrix_norm.morpho b/test/linalg/methods/complexmatrix_norm.morpho new file mode 100644 index 00000000..09729729 --- /dev/null +++ b/test/linalg/methods/complexmatrix_norm.morpho @@ -0,0 +1,20 @@ +// Norm of a ComplexMatrix +import constants + +var A = ComplexMatrix(2,2) +A[0,0]=1+im +A[0,1]=2+im +A[1,0]=3-3im +A[1,1]=4-4im + +print abs(A.norm(1) - (4*sqrt(2) + sqrt(5))) < 1e-15 +// expect: true + +print abs(A.norm(Inf) - 7*sqrt(2)) < 1e-15 +// expect: true + +print abs(A.norm() - sqrt(57)) < 1e-15 +// expect: true + +print A.norm(5) +// expect error 'LnAlgMtrxNrmArgs' diff --git a/test/linalg/methods/complexmatrix_outer.morpho b/test/linalg/methods/complexmatrix_outer.morpho new file mode 100644 index 00000000..4a2e6ffb --- /dev/null +++ b/test/linalg/methods/complexmatrix_outer.morpho @@ -0,0 +1,9 @@ +// Outer product of two vectors + +var A = ComplexMatrix((1+1im,2-2im,3+3im)) +var B = ComplexMatrix((4+4im,5-5im)) + +print A.outer(B) +// expect: [ 0 + 8im 10 + 0im ] +// expect: [ 16 + 0im 0 - 20im ] +// expect: [ 0 + 24im 30 + 0im ] diff --git a/test/linalg/methods/complexmatrix_qr.morpho b/test/linalg/methods/complexmatrix_qr.morpho new file mode 100644 index 00000000..7d509bb6 --- /dev/null +++ b/test/linalg/methods/complexmatrix_qr.morpho @@ -0,0 +1,144 @@ +// QR Decomposition for ComplexMatrix + +// Test with a square complex matrix +var A = ComplexMatrix(((1.0+1.0im, 2.0+0.0im, 3.0-1.0im), + (4.0+2.0im, 5.0+1.0im, 6.0+0.0im), + (7.0+0.0im, 8.0-1.0im, 9.0+2.0im))) + +var qr = A.qr() + +print qr +// expect: (, ) + +var Q = qr[0] +var R = qr[1] + +print Q.dimensions() +// expect: (3, 3) + +print R.dimensions() +// expect: (3, 3) + +// Verify Q is unitary: Q^H * Q should be approximately I (conjugate transpose) +var QHQ = Q.conjTranspose() * Q +var I = ComplexMatrix(3,3) +for (var i = 0; i < 3; i = i + 1) { + I[i,i] = 1.0 + 0.0im +} + +print (QHQ - I).norm() < 1e-10 +// expect: true + +// Verify R is upper triangular (check lower triangle is zero) +var R_lower_norm = 0.0 +for (var i = 0; i < 3; i = i + 1) { + for (var j = 0; j < i; j = j + 1) { + var val = R[i,j] + R_lower_norm += val.abs() + } +} +print R_lower_norm < 1e-10 +// expect: true + +// Verify Q * R has the right structure +var QR = Q * R +print QR.dimensions() +// expect: (3, 3) + +// Test with a non-square matrix (tall matrix) +var B = ComplexMatrix(4,2) +B[0,0] = 1.0 + 1.0im +B[0,1] = 2.0 + 0.0im +B[1,0] = 3.0 - 1.0im +B[1,1] = 4.0 + 2.0im +B[2,0] = 5.0 + 0.0im +B[2,1] = 6.0 - 1.0im +B[3,0] = 7.0 + 1.0im +B[3,1] = 8.0 + 0.0im + +var qr2 = B.qr() +var Q2 = qr2[0] +var R2 = qr2[1] + +print Q2.dimensions() +// expect: (4, 4) + +print R2.dimensions() +// expect: (4, 2) + +// Verify Q2 first 2 columns are orthonormal (unitary) +// For tall matrices, only the first min(m,n) columns from ZUNGQR are orthonormal +// The remaining columns are zero +var Q2_col0 = Q2.column(0) +var Q2_col1 = Q2.column(1) +// Check norms +var norm0 = Q2_col0.norm() +var norm1 = Q2_col1.norm() + +print abs(norm0-1) < 1e-7 // expect: true +print abs(norm1-1) < 1e-7 // expect: true + +// Check orthogonality: inner product should be close to zero +var inner01 = Q2_col0.inner(Q2_col1) +var inner01_mag = inner01.abs() +print inner01_mag < 1e-10 +// expect: true + +// Verify R2 is upper triangular +var R2_lower_norm = 0.0 +for (var i = 0; i < 4; i = i + 1) { + for (var j = 0; j < 2; j = j + 1) { + if (i > j) { + var val = R2[i,j] + R2_lower_norm = val.abs() + } + } +} +print R2_lower_norm < 1e-10 +// expect: true + +// Test with a wide matrix +var C = ComplexMatrix(2,4) +C[0,0] = 1.0 + 1.0im +C[0,1] = 2.0 + 0.0im +C[0,2] = 3.0 - 1.0im +C[0,3] = 4.0 + 2.0im +C[1,0] = 5.0 + 0.0im +C[1,1] = 6.0 - 1.0im +C[1,2] = 7.0 + 1.0im +C[1,3] = 8.0 + 0.0im + +var qr3 = C.qr() +var Q3 = qr3[0] +var R3 = qr3[1] + +print Q3.dimensions() +// expect: (2, 2) + +print R3.dimensions() +// expect: (2, 4) + +// Verify Q3 is unitary +var Q3HQ3 = Q3.conjTranspose() * Q3 +var I2 = ComplexMatrix(2,2) +for (var i = 0; i < 2; i = i + 1) { + I2[i,i] = 1.0 + 0.0im +} +print (Q3HQ3 - I2).norm() < 1e-10 +// expect: true + +// Test with real-valued complex matrix (should work like real matrix) +var D = ComplexMatrix(((1.0+0.0im, 0.0+0.0im), + (0.0+0.0im, 2.0+0.0im))) +var qr4 = D.qr() +var Q4 = qr4[0] +var R4 = qr4[1] + +// Verify Q4 is unitary +var Q4HQ4 = Q4.conjTranspose() * Q4 +var I2b = ComplexMatrix(2,2) +for (var i = 0; i < 2; i = i + 1) { + I2b[i,i] = 1.0 + 0.0im +} +print (Q4HQ4 - I2b).norm() < 1e-10 +// expect: true diff --git a/test/linalg/methods/complexmatrix_real.morpho b/test/linalg/methods/complexmatrix_real.morpho new file mode 100644 index 00000000..620f2503 --- /dev/null +++ b/test/linalg/methods/complexmatrix_real.morpho @@ -0,0 +1,11 @@ +// Real part of a ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.real() +// expect: [ 1 2 ] +// expect: [ 3 4 ] diff --git a/test/linalg/methods/complexmatrix_reshape.morpho b/test/linalg/methods/complexmatrix_reshape.morpho new file mode 100644 index 00000000..cf4ea782 --- /dev/null +++ b/test/linalg/methods/complexmatrix_reshape.morpho @@ -0,0 +1,18 @@ +// Reshape ComplexMatrix + +var A = ComplexMatrix(2,2) +A[0,0]=1+1im +A[1,0]=2+2im +A[0,1]=3+3im +A[1,1]=4+4im +print A +// expect: [ 1 + 1im 3 + 3im ] +// expect: [ 2 + 2im 4 + 4im ] + +A.reshape(4,1) +print A +// expect: [ 1 + 1im ] +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] +// expect: [ 4 + 4im ] + diff --git a/test/linalg/methods/complexmatrix_roll.morpho b/test/linalg/methods/complexmatrix_roll.morpho new file mode 100644 index 00000000..c8ecb690 --- /dev/null +++ b/test/linalg/methods/complexmatrix_roll.morpho @@ -0,0 +1,50 @@ +// Roll contents of a matrix + +var A = ComplexMatrix(3,3) +var k=0 +for (i in 0...3) for (j in 0...3) { A[i,j] = Complex(k,k); k+=1 } + +print A +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] + +print A.roll(1,1) +// expect: [ 2 + 2im 0 + 0im 1 + 1im ] +// expect: [ 5 + 5im 3 + 3im 4 + 4im ] +// expect: [ 8 + 8im 6 + 6im 7 + 7im ] + +print A.roll(2,1) +// expect: [ 1 + 1im 2 + 2im 0 + 0im ] +// expect: [ 4 + 4im 5 + 5im 3 + 3im ] +// expect: [ 7 + 7im 8 + 8im 6 + 6im ] + +print A.roll(3,1) +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] + +print A.roll(4,1) +// expect: [ 2 + 2im 0 + 0im 1 + 1im ] +// expect: [ 5 + 5im 3 + 3im 4 + 4im ] +// expect: [ 8 + 8im 6 + 6im 7 + 7im ] + +print A.roll(-1,0) +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] + +print A.roll(-2,0) +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] + +print A.roll(-3,0) +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] + +print A.roll(-4,0) +// expect: [ 3 + 3im 4 + 4im 5 + 5im ] +// expect: [ 6 + 6im 7 + 7im 8 + 8im ] +// expect: [ 0 + 0im 1 + 1im 2 + 2im ] diff --git a/test/linalg/methods/complexmatrix_roll_negative.morpho b/test/linalg/methods/complexmatrix_roll_negative.morpho new file mode 100644 index 00000000..ef2e2a81 --- /dev/null +++ b/test/linalg/methods/complexmatrix_roll_negative.morpho @@ -0,0 +1,12 @@ +// Negative roll values for ComplexMatrix + +var A = ComplexMatrix(3,1) +A[0,0]=1+1im +A[1,0]=2+2im +A[2,0]=3+3im + +print A.roll(-1) +// expect: [ 2 + 2im ] +// expect: [ 3 + 3im ] +// expect: [ 1 + 1im ] + diff --git a/test/linalg/methods/complexmatrix_sum.morpho b/test/linalg/methods/complexmatrix_sum.morpho new file mode 100644 index 00000000..64369ace --- /dev/null +++ b/test/linalg/methods/complexmatrix_sum.morpho @@ -0,0 +1,12 @@ +// Sum + +var A = ComplexMatrix(3,2) +A[0,0]=1+im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im +A[2,0]=5+5im +A[2,1]=6+6im + +print A.sum() +// expect: 21 + 21im diff --git a/test/linalg/methods/complexmatrix_svd.morpho b/test/linalg/methods/complexmatrix_svd.morpho new file mode 100644 index 00000000..388681fa --- /dev/null +++ b/test/linalg/methods/complexmatrix_svd.morpho @@ -0,0 +1,21 @@ +// Singular Value Decomposition + +var A = ComplexMatrix(((1+1im,0+0im),(0+0im,2+2im))) + +var svd = A.svd() + +// Test reconstruction: U * S * V^T should approximately equal A +var U = svd[0] +var S = svd[1] +var V = svd[2] + +// Create diagonal matrix from singular values +var Sdiag = ComplexMatrix(2,2) +Sdiag[0,0] = S[0] +Sdiag[1,1] = S[1] + +var VT = V.transpose() +var reconstructed = U * Sdiag * VT + +print (reconstructed - A).norm() < 1e-10 +// expect: true diff --git a/test/linalg/methods/complexmatrix_trace.morpho b/test/linalg/methods/complexmatrix_trace.morpho new file mode 100644 index 00000000..4a01913f --- /dev/null +++ b/test/linalg/methods/complexmatrix_trace.morpho @@ -0,0 +1,10 @@ +// Inverse + +var A = ComplexMatrix(2,2) +A[0,0]=1+4im +A[0,1]=2+3im +A[1,0]=3+2im +A[1,1]=4+1im + +print A.trace() +// expect: 5 + 5im diff --git a/test/linalg/methods/complexmatrix_transpose.morpho b/test/linalg/methods/complexmatrix_transpose.morpho new file mode 100644 index 00000000..92049585 --- /dev/null +++ b/test/linalg/methods/complexmatrix_transpose.morpho @@ -0,0 +1,13 @@ +// Inverse + +var A = ComplexMatrix(3,2) +A[0,0]=1+1im +A[0,1]=2+2im +A[1,0]=3+3im +A[1,1]=4+4im +A[2,0]=5+5im +A[2,1]=6+6im + +print A.transpose() +// expect: [ 1 + 1im 3 + 3im 5 + 5im ] +// expect: [ 2 + 2im 4 + 4im 6 + 6im ] diff --git a/test/linalg/methods/matrix_count.morpho b/test/linalg/methods/matrix_count.morpho new file mode 100644 index 00000000..46d5a971 --- /dev/null +++ b/test/linalg/methods/matrix_count.morpho @@ -0,0 +1,13 @@ +// Count elements in Matrix + +var A = Matrix(2,3) +A[0,0]=1 +A[0,1]=2 +A[0,2]=3 +A[1,0]=4 +A[1,1]=5 +A[1,2]=6 + +print A.count() +// expect: 6 + diff --git a/test/linalg/methods/matrix_dimensions.morpho b/test/linalg/methods/matrix_dimensions.morpho new file mode 100644 index 00000000..9fa7f8b5 --- /dev/null +++ b/test/linalg/methods/matrix_dimensions.morpho @@ -0,0 +1,9 @@ +// Get dimensions of Matrix + +var A = Matrix(2,3) +print A.dimensions() +// expect: (2, 3) + +var a = Matrix([[0.8, -0.4], [0.4, 0.8]]) +print a.dimensions() +// expect: (2, 2) diff --git a/test/linalg/methods/matrix_eigensystem.morpho b/test/linalg/methods/matrix_eigensystem.morpho new file mode 100644 index 00000000..957f676d --- /dev/null +++ b/test/linalg/methods/matrix_eigensystem.morpho @@ -0,0 +1,19 @@ +// Eigenvalues and eigenvectors + +var A = Matrix(2,2) +A[0,0]=0 +A[0,1]=1 +A[1,0]=1 +A[1,1]=0 + +var es=A.eigensystem() + +print es +// expect: ((1, -1), ) + +print es[0] +// expect: (1, -1) + +print es[1].format("%.2g") +// expect: [ 0.71 -0.71 ] +// expect: [ 0.71 0.71 ] diff --git a/test/linalg/methods/matrix_eigenvalues.morpho b/test/linalg/methods/matrix_eigenvalues.morpho new file mode 100644 index 00000000..e45399eb --- /dev/null +++ b/test/linalg/methods/matrix_eigenvalues.morpho @@ -0,0 +1,10 @@ +// Eigenvalues + +var A = Matrix(2,2) +A[0,0]=0 +A[0,1]=1 +A[1,0]=1 +A[1,1]=0 + +print A.eigenvalues() +// expect: (1, -1) diff --git a/test/linalg/methods/matrix_enumerate.morpho b/test/linalg/methods/matrix_enumerate.morpho new file mode 100644 index 00000000..37d1cafa --- /dev/null +++ b/test/linalg/methods/matrix_enumerate.morpho @@ -0,0 +1,13 @@ +// Enumerate elements of a matrix + +var A = Matrix(2,2) +A[0,0] = 1 +A[1,0] = 2 +A[0,1] = 3 +A[1,1] = 4 + +for (x in A) print x +// expect: 1 +// expect: 2 +// expect: 3 +// expect: 4 diff --git a/test/linalg/methods/matrix_format.morpho b/test/linalg/methods/matrix_format.morpho new file mode 100644 index 00000000..999c831e --- /dev/null +++ b/test/linalg/methods/matrix_format.morpho @@ -0,0 +1,12 @@ +// Format +import constants + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=Pi/2 +A[1,0]=Pi/2 +A[1,1]=-1.5 + +print A.format("%5.2f") +// expect: [ 1.00 1.57 ] +// expect: [ 1.57 -1.50 ] diff --git a/test/linalg/methods/matrix_inner.morpho b/test/linalg/methods/matrix_inner.morpho new file mode 100644 index 00000000..4c789d22 --- /dev/null +++ b/test/linalg/methods/matrix_inner.morpho @@ -0,0 +1,17 @@ +// Inner product of Matrices + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +var B = Matrix(2,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=1 + +print A.inner(B) +// expect: 5 + diff --git a/test/linalg/methods/matrix_inverse.morpho b/test/linalg/methods/matrix_inverse.morpho new file mode 100644 index 00000000..85b4e02a --- /dev/null +++ b/test/linalg/methods/matrix_inverse.morpho @@ -0,0 +1,11 @@ +// Inverse + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +print A.inverse() +// expect: [ -2 1 ] +// expect: [ 1.5 -0.5 ] diff --git a/test/linalg/methods/matrix_inverse_singular.morpho b/test/linalg/methods/matrix_inverse_singular.morpho new file mode 100644 index 00000000..d3dea86a --- /dev/null +++ b/test/linalg/methods/matrix_inverse_singular.morpho @@ -0,0 +1,10 @@ +// Inverse + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=2 +A[1,1]=4 + +print A.inverse() +// expect error 'LnAlgMtrxSnglr' diff --git a/test/linalg/methods/matrix_norm.morpho b/test/linalg/methods/matrix_norm.morpho new file mode 100644 index 00000000..b1a4cd67 --- /dev/null +++ b/test/linalg/methods/matrix_norm.morpho @@ -0,0 +1,20 @@ +// Norm of an Matrix +import constants + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=-2 +A[1,0]=3 +A[1,1]=-4 + +print A.norm(1) +// expect: 6 + +print A.norm(Inf) +// expect: 7 + +print abs(A.norm() - sqrt(30)) < 1e-15 +// expect: true + +print A.norm(5) +// expect error 'LnAlgMtrxNrmArgs' diff --git a/test/linalg/methods/matrix_outer.morpho b/test/linalg/methods/matrix_outer.morpho new file mode 100644 index 00000000..bb08c58c --- /dev/null +++ b/test/linalg/methods/matrix_outer.morpho @@ -0,0 +1,9 @@ +// Outer product of two vectors + +var A = Matrix((1,2,3)) +var B = Matrix((4,5)) + +print A.outer(B) +// expect: [ 4 5 ] +// expect: [ 8 10 ] +// expect: [ 12 15 ] diff --git a/test/linalg/methods/matrix_qr.morpho b/test/linalg/methods/matrix_qr.morpho new file mode 100644 index 00000000..9dfc2b26 --- /dev/null +++ b/test/linalg/methods/matrix_qr.morpho @@ -0,0 +1,134 @@ +// QR Decomposition + +// Test with a square matrix (this one is singular, so R will have a zero on the diagonal) +var A = Matrix(((1.0,2.0,3.0),(4.0,5.0,6.0),(7.0,8.0,9.0))) + +var qr = A.qr() + +print qr +// expect: (, ) + +var Q = qr[0] +var R = qr[1] + +print Q.dimensions() +// expect: (3, 3) + +print R.dimensions() +// expect: (3, 3) + +// Verify Q is orthogonal: Q^T * Q should be approximately I +var QTQ = Q.transpose() * Q +var I = IdentityMatrix(3) + +print (QTQ - I).norm() < 1e-10 +// expect: true + +// Verify R is upper triangular (check lower triangle is zero) +var R_lower_norm = 0.0 +for (var i = 0; i < 3; i = i + 1) { + for (var j = 0; j < i; j = j + 1) { + R_lower_norm = R_lower_norm + R[i,j]*R[i,j] + } +} +print R_lower_norm < 1e-10 +// expect: true + +// Check R's diagonal - since A is singular, one diagonal element should be (close to) zero +// This indicates the matrix has rank 2 (not full rank) +print abs(R[2,2]) < 1e-8 +// expect: true + +// Verify Q * R reconstruction +var QR = Q * R +print (QR - A).norm() < 1e-10 +// expect: true + +// Test with a non-square matrix (tall matrix) +var B = Matrix(4,2) +B[0,0] = 1.0 +B[0,1] = 2.0 +B[1,0] = 3.0 +B[1,1] = 4.0 +B[2,0] = 5.0 +B[2,1] = 6.0 +B[3,0] = 7.0 +B[3,1] = 8.0 + +var qr2 = B.qr() +var Q2 = qr2[0] +var R2 = qr2[1] + +print Q2.dimensions() +// expect: (4, 4) + +print R2.dimensions() +// expect: (4, 2) + +// Verify Q2 first 2 columns are orthonormal +// For tall matrices, only the first min(m,n) columns from DORGQR are orthonormal +// The remaining columns are zero +var Q2_col0 = Q2.column(0) +var Q2_col1 = Q2.column(1) +// Check norms +print Q2_col0.norm() < 1.0 + 1e-10 and Q2_col0.norm() > 1.0 - 1e-10 +// expect: true +print Q2_col1.norm() < 1.0 + 1e-10 and Q2_col1.norm() > 1.0 - 1e-10 +// expect: true +// Check orthogonality: dot product should be close to zero +var dot01 = Q2_col0.inner(Q2_col1) +print dot01 < 1e-10 and dot01 > -1e-10 +// expect: true + +// Verify R2 is upper triangular +var R2_lower_norm = 0.0 +for (var i = 0; i < 4; i = i + 1) { + for (var j = 0; j < 2; j = j + 1) { + if (i > j) { + R2_lower_norm = R2_lower_norm + R2[i,j]*R2[i,j] + } + } +} +print R2_lower_norm < 1e-10 +// expect: true + +// Test with a wide matrix +var C = Matrix(2,4) +C[0,0] = 1.0 +C[0,1] = 2.0 +C[0,2] = 3.0 +C[0,3] = 4.0 +C[1,0] = 5.0 +C[1,1] = 6.0 +C[1,2] = 7.0 +C[1,3] = 8.0 + +var qr3 = C.qr() +var Q3 = qr3[0] +var R3 = qr3[1] + +print Q3.dimensions() +// expect: (2, 2) + +print R3.dimensions() +// expect: (2, 4) + +// Verify Q3 is orthogonal +var Q3TQ3 = Q3.transpose() * Q3 +var I2 = IdentityMatrix(2) +print (Q3TQ3 - I2).norm() < 1e-10 +// expect: true + +// Test with identity matrix +var I3 = IdentityMatrix(3) +var qr4 = I3.qr() +var Q4 = qr4[0] +var R4 = qr4[1] + +// Q should be close to identity +print (Q4 - I3).norm() < 1e-10 +// expect: true + +// R should be close to identity +print (R4 - I3).norm() < 1e-10 +// expect: true diff --git a/test/linalg/methods/matrix_reshape.morpho b/test/linalg/methods/matrix_reshape.morpho new file mode 100644 index 00000000..d49bbe5b --- /dev/null +++ b/test/linalg/methods/matrix_reshape.morpho @@ -0,0 +1,18 @@ +// Reshape Matrix + +var A = Matrix(2,2) +A[0,0]=1 +A[1,0]=2 +A[0,1]=3 +A[1,1]=4 +print A +// expect: [ 1 3 ] +// expect: [ 2 4 ] + +A.reshape(4,1) +print A +// expect: [ 1 ] +// expect: [ 2 ] +// expect: [ 3 ] +// expect: [ 4 ] + diff --git a/test/linalg/methods/matrix_roll.morpho b/test/linalg/methods/matrix_roll.morpho new file mode 100644 index 00000000..b0a74648 --- /dev/null +++ b/test/linalg/methods/matrix_roll.morpho @@ -0,0 +1,50 @@ +// Roll contents of a matrix + +var A = Matrix(3,3) +var k=0 +for (i in 0...3) for (j in 0...3) { A[i,j] = k; k+=1 } + +print A +// expect: [ 0 1 2 ] +// expect: [ 3 4 5 ] +// expect: [ 6 7 8 ] + +print A.roll(1,1) +// expect: [ 2 0 1 ] +// expect: [ 5 3 4 ] +// expect: [ 8 6 7 ] + +print A.roll(2,1) +// expect: [ 1 2 0 ] +// expect: [ 4 5 3 ] +// expect: [ 7 8 6 ] + +print A.roll(3,1) +// expect: [ 0 1 2 ] +// expect: [ 3 4 5 ] +// expect: [ 6 7 8 ] + +print A.roll(4,1) +// expect: [ 2 0 1 ] +// expect: [ 5 3 4 ] +// expect: [ 8 6 7 ] + +print A.roll(-1,0) +// expect: [ 3 4 5 ] +// expect: [ 6 7 8 ] +// expect: [ 0 1 2 ] + +print A.roll(-2,0) +// expect: [ 6 7 8 ] +// expect: [ 0 1 2 ] +// expect: [ 3 4 5 ] + +print A.roll(-3,0) +// expect: [ 0 1 2 ] +// expect: [ 3 4 5 ] +// expect: [ 6 7 8 ] + +print A.roll(-4,0) +// expect: [ 3 4 5 ] +// expect: [ 6 7 8 ] +// expect: [ 0 1 2 ] diff --git a/test/linalg/methods/matrix_sum.morpho b/test/linalg/methods/matrix_sum.morpho new file mode 100644 index 00000000..0ccdee3b --- /dev/null +++ b/test/linalg/methods/matrix_sum.morpho @@ -0,0 +1,12 @@ +// Sum + +var A = Matrix(3,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 +A[2,0]=5 +A[2,1]=6 + +print A.sum() +// expect: 21 diff --git a/test/linalg/methods/matrix_svd.morpho b/test/linalg/methods/matrix_svd.morpho new file mode 100644 index 00000000..23cdac47 --- /dev/null +++ b/test/linalg/methods/matrix_svd.morpho @@ -0,0 +1,53 @@ +// Singular Value Decomposition + +var A = Matrix(((1,0),(0,2))) + +var svd = A.svd() + +print svd +// expect: (, (2, 1), ) + +print (svd[0] - Matrix(((0,1),(1,0)))).norm() < 1e-10 +// expect: true + +print svd[1] +// expect: (2, 1) + +print (svd[2] - Matrix(((0,1),(1,0)))).norm() < 1e-10 +// expect: true + +// Test reconstruction: U * S * V^T should approximately equal A +var U = svd[0] +var S = svd[1] +var V = svd[2] + +// Create diagonal matrix from singular values +var Sdiag = Matrix(2,2) +Sdiag[0,0] = S[0] +Sdiag[1,1] = S[1] + +var VT = V.transpose() +var reconstructed = U * Sdiag * VT + +print (reconstructed - A).norm() < 1e-10 +// expect: true + +// Test with a non-square matrix +var B = Matrix(3,2) +B[0,0]=1 +B[0,1]=0 +B[1,0]=0 +B[1,1]=2 +B[2,0]=0 +B[2,1]=0 + +var svd2 = B.svd() + +print svd2[0].dimensions() +// expect: (3, 3) + +print svd2[1] +// expect: (2, 1) + +print svd2[2].dimensions() +// expect: (2, 2) diff --git a/test/linalg/methods/matrix_trace.morpho b/test/linalg/methods/matrix_trace.morpho new file mode 100644 index 00000000..2fe81a5f --- /dev/null +++ b/test/linalg/methods/matrix_trace.morpho @@ -0,0 +1,10 @@ +// Inverse + +var A = Matrix(2,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 + +print A.trace() +// expect: 5 diff --git a/test/linalg/methods/matrix_transpose.morpho b/test/linalg/methods/matrix_transpose.morpho new file mode 100644 index 00000000..4043881e --- /dev/null +++ b/test/linalg/methods/matrix_transpose.morpho @@ -0,0 +1,13 @@ +// Inverse + +var A = Matrix(3,2) +A[0,0]=1 +A[0,1]=2 +A[1,0]=3 +A[1,1]=4 +A[2,0]=5 +A[2,1]=6 + +print A.transpose() +// expect: [ 1 3 5 ] +// expect: [ 2 4 6 ] From 905f10bccf0989f2527e545c2e5ee3641dfa8eb0 Mon Sep 17 00:00:00 2001 From: Tim Atherton <54725421+softmattertheory@users.noreply.github.com> Date: Wed, 21 Jan 2026 06:13:56 -0500 Subject: [PATCH 153/156] Remove newlinalg folder and contents, completing integration --- newlinalg/.gitattributes | 2 - newlinalg/.gitignore | 5 - newlinalg/CMakeLists.txt | 101 -- newlinalg/src/CMakeLists.txt | 6 - newlinalg/src/complexmatrix.c | 649 ------- newlinalg/src/complexmatrix.h | 20 - newlinalg/src/matrix.c | 1488 ----------------- newlinalg/src/matrix.h | 236 --- newlinalg/src/newlinalg.c | 52 - newlinalg/src/newlinalg.h | 93 -- .../test/arithmetic/complexmatrix_acc.morpho | 14 - .../complexmatrix_add_complexmatrix.morpho | 8 - .../complexmatrix_add_matrix.morpho | 9 - 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-cmake_minimum_required(VERSION 3.13) - -project(morpho-newlinalg) - -# Build the library as a plugin -add_library(newlinalg MODULE "") - -# Suppress 'lib' prefix -set_target_properties(newlinalg PROPERTIES PREFIX "") - -# Add sources -add_subdirectory(src) - -#------------------------------------------------------------------------------- -# Morpho library -#------------------------------------------------------------------------------- - -# Locate the morpho.h header file and store in MORPHO_HEADER -find_file(MORPHO_HEADER - morpho.h - HINTS - /usr/local/opt/morpho - /opt/homebrew/opt/morpho - /usr/local/include/morpho - "C:\\Program Files\\Morpho\\include\\" - ) - -# Identify folder that morpho.h is located in from MORPHO_HEADER and store in MORPHO_INCLUDE -get_filename_component(MORPHO_INCLUDE ${MORPHO_HEADER} DIRECTORY) - -# Add morpho headers to MORPHO_INCLUDE -target_include_directories(newlinalg PUBLIC ${MORPHO_INCLUDE}) - -# Add general header search paths -target_include_directories(newlinalg PUBLIC /usr/local/include /opt/homebrew/include) - -# Add morpho headers in subfolders to MORPHO_INCLUDE -file(GLOB morpho_subdirectories LIST_DIRECTORIES true ${MORPHO_INCLUDE}/*) -foreach(dir ${morpho_subdirectories}) - IF(IS_DIRECTORY ${dir}) - target_include_directories(zeromq PUBLIC ${dir}) - ELSE() - CONTINUE() - ENDIF() -endforeach() - -# Locate libmorpho -find_library(MORPHO_LIBRARY - NAMES morpho libmorpho -) - -target_link_libraries(newlinalg ${MORPHO_LIBRARY}) - -#------------------------------------------------------------------------------- -# BLAS and LAPACK -#------------------------------------------------------------------------------- - -message(STATUS "Searching for BLAS and LAPACK") -# Locate a lapack version -# Currently we prefer LAPACKE -# TODO: Fix morpho source to select between lapack and lapacke -find_library(LAPACK_LIBRARY - NAMES lapacke liblapacke lapack liblapack libopenblas - HINTS - "C:\\Program Files\\Morpho\\lib\\" -) -if (LAPACK_LIBRARY) -message(STATUS "Found LAPACK at ${LAPACK_LIBRARY}") -endif() - -# Locate cblas -find_library(CBLAS_LIBRARY - NAMES cblas libcblas blas libblas openblas libopenblas - HINTS - "C:\\Program Files\\Morpho\\lib\\" -) -if (CBLAS_LIBRARY) -message(STATUS "Found blas at ${CBLAS_LIBRARY}") -endif() - -# Find cblas.h header file -find_path(CBLAS_INCLUDE cblas.h - HINTS - "C:\\Program Files\\Morpho\\include\\lapack") - -# Add cblas headers to include folders -target_include_directories(newlinalg PUBLIC ${CBLAS_INCLUDE}) - -message(STATUS "Found cblas headers at ${CBLAS_INCLUDE}") - -target_link_libraries(newlinalg ${CBLAS_LIBRARY}) -target_link_libraries(newlinalg ${LAPACK_LIBRARY}) - -#------------------------------------------------------------------------------- -# Install -#------------------------------------------------------------------------------- - -set(CMAKE_INSTALL_PREFIX ..) - -# Install the resulting binary -install(TARGETS newlinalg LIBRARY DESTINATION lib/) diff --git a/newlinalg/src/CMakeLists.txt b/newlinalg/src/CMakeLists.txt deleted file mode 100644 index e69c0c5c..00000000 --- a/newlinalg/src/CMakeLists.txt +++ /dev/null @@ -1,6 +0,0 @@ -target_sources(newlinalg - PRIVATE - newlinalg.c newlinalg.h - matrix.c matrix.h - complexmatrix.c complexmatrix.h -) \ No newline at end of file diff --git a/newlinalg/src/complexmatrix.c b/newlinalg/src/complexmatrix.c deleted file mode 100644 index 89f2d8b4..00000000 --- a/newlinalg/src/complexmatrix.c +++ /dev/null @@ -1,649 +0,0 @@ -/** @file complexmatrix.c - * @author T J Atherton - * - * @brief New linear algebra library -*/ - -#define ACCELERATE_NEW_LAPACK -#define MORPHO_INCLUDE_LINALG - -#include - -#include "newlinalg.h" -#include "matrix.h" -#include "complexmatrix.h" -#include "format.h" -#include "cmplx.h" - -objecttype objectcomplexmatrixtype; -#define OBJECT_COMPLEXMATRIX objectcomplexmatrixtype - -typedef objectmatrix objectcomplexmatrix; - -/* ********************************************************************** - * ComplexMatrix utility functions - * ********************************************************************** */ - -/* ---------------------- - * Callbacks - * ---------------------- */ - -static void _printelfn(vm *v, double *el) { - objectcomplex cmplx = MORPHO_STATICCOMPLEX(el[0], el[1]); - complex_print(v, &cmplx); -} - -static bool _printeltobufffn(varray_char *out, char *format, double *el) { - if (!format_printtobuffer(MORPHO_FLOAT(el[0]), format, out)) return false; - varray_charadd(out, " ", 1); - varray_charadd(out, (el[1]<0 ? "-" : "+"), 1); - if (!format_printtobuffer(MORPHO_FLOAT(fabs(el[1])), format, out)) return false; - varray_charadd(out, "im", 2); - return true; -} - -static value _getelfn(vm *v, double *el) { - objectcomplex *new = object_newcomplex(el[0], el[1]); - return morpho_wrapandbind(v, (object *) new); -} - -static linalgError_t _setelfn(vm *v, value in, double *el) { - if (MORPHO_ISCOMPLEX(in)) { - *((MorphoComplex *) el) = MORPHO_GETCOMPLEX(in)->Z; - } else if (morpho_valuetofloat(in, el)) { - el[1] = 0.0; // Set imaginary part to zero - } else return LINALGERR_NON_NUMERICAL; - return LINALGERR_OK; -} - -/** Evaluate norms */ -static double _normfn(objectmatrix *a, matrix_norm_t nrm) { - char cnrm = matrix_normtolapack(nrm); - int nrows=a->nrows, ncols=a->ncols; - -#ifdef MORPHO_LINALG_USE_LAPACKE - return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); -#else - double work[a->nrows]; - return zlange_(&cnrm, &nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, work); -#endif -} - -/** Low level linear solve */ -static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { - int n=a->nrows, nrhs = b->ncols, info; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); -#else - zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, - &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level eigensolver */ -static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { - int info, n=a->nrows; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, (__LAPACK_double_complex *) w, NULL, n, (vec ? vec->elements : NULL), n); -#else - int lwork=4*n; MorphoComplex work[4*n]; double rwork[2*n]; - zgeev_("N", (vec ? "V" : "N"), &n, (__LAPACK_double_complex *) a->elements, &n, (__LAPACK_double_complex *) w, NULL, &n, (__LAPACK_double_complex *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level SVD */ -static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { - int info, m=a->nrows, n=a->ncols; - int minmn = (m < n) ? m : n; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_zgesvd(LAPACK_COL_MAJOR, - (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U - (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT - m, n, - (__LAPACK_double_complex *) a->elements, m, // input matrix A (overwritten) - s, // singular values (min(m,n)) - (__LAPACK_double_complex *) (u ? u->elements : NULL), m, // U matrix (m×m) - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), n // VT matrix (n×n) - ); -#else - int lwork = -1; - __LAPACK_double_complex work_query; - double rwork[5 * minmn]; // rwork needs at least 5*min(m,n) for zgesvd - - // Query optimal work size - zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, - (__LAPACK_double_complex *) a->elements, &m, s, - (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, - &work_query, &lwork, rwork, &info); - - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); - - lwork = (int)creal(work_query); - __LAPACK_double_complex work[lwork]; - zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, - (__LAPACK_double_complex *) a->elements, &m, s, - (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, - work, &lwork, rwork, &info); -#endif - - return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level QR decomposition */ -static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { - int info, m=a->nrows, n=a->ncols; - int minmn = (m < n) ? m : n; - __LAPACK_double_complex tau[minmn]; - - // Compute QR factorization without pivoting: A = Q*R -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_zgeqrf(LAPACK_COL_MAJOR, m, n, (__LAPACK_double_complex *) a->elements, m, tau); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#else - int lwork = -1; - __LAPACK_double_complex work_query; - - // Query optimal work size for ZGEQRF, which is reused for ZUNGQR - zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, &work_query, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); - - int lwork_geqrf = (int) creal(work_query); - __LAPACK_double_complex work[lwork_geqrf]; - lwork = lwork_geqrf; - - // Compute QR factorization without pivoting - zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, work, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#endif - - // Extract R (upper triangle of a) into r - // Copy entire matrix first then zero out below the diagonal - matrix_copy(a, r); - __LAPACK_double_complex *relems = (__LAPACK_double_complex *) r->elements; - for (int j = 0; j < n && j < m - 1; j++) { - memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(__LAPACK_double_complex)); - } - - // Generate Q from reflectors - if (q) { - // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) - // ZGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns - __LAPACK_double_complex *aelems = (__LAPACK_double_complex *) a->elements; - __LAPACK_double_complex *qelems = (__LAPACK_double_complex *) q->elements; - for (int j = 0; j < n; j++) { - cblas_zcopy(m, &aelems[j * m], 1, &qelems[j * m], 1); - } - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_zungqr(LAPACK_COL_MAJOR, m, minmn, minmn, (__LAPACK_double_complex *) q->elements, m, tau); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#else - lwork = lwork_geqrf; - zungqr_(&m, &minmn, &minmn, (__LAPACK_double_complex *) q->elements, &m, tau, work, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#endif - - // If Q should be m×m, zero out remaining columns if m > minmn - if (m > minmn) memset(&q->elements[minmn * m * q->nvals], 0, (m - minmn) * m * sizeof(__LAPACK_double_complex)); - } - - return LINALGERR_OK; -} - -/* ---------------------- - * Interface definition - * ---------------------- */ - -matrixinterfacedefn complexmatrixdefn = { - .printelfn = _printelfn, - .printeltobufffn = _printeltobufffn, - .getelfn = _getelfn, - .setelfn = _setelfn, - .normfn = _normfn, - .solvefn = _solve, - .eigenfn = _eigen, - .svdfn = _svd, - .qrfn = _qr -}; - -/* ---------------------- - * Constructor - * ---------------------- */ - -/** Create a new complex matrix */ -objectcomplexmatrix *complexmatrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { - return (objectcomplexmatrix *) matrix_newwithtype(OBJECT_COMPLEXMATRIX, nrows, ncols, 2, zero); -} - -/* ---------------------- - * Element access - * ---------------------- */ - -/** Sets a matrix element. */ -linalgError_t complexmatrix_setelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); - matrix->elements[ix]=creal(value); - matrix->elements[ix+1]=cimag(value); - return LINALGERR_OK; -} - -/** Gets a matrix element */ -linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, MorphoComplex *value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - MatrixCount_t ix = matrix->nvals*(col*matrix->nrows+row); - if (value) *value=MCBuild(matrix->elements[ix],matrix->elements[ix+1]); - return LINALGERR_OK; -} - -/** Copies a real matrix x into a complex matrix y */ -static linalgError_t _stridedcopy(objectmatrix *x, objectmatrix *y, int offset) { - if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); - return LINALGERR_OK; -} - -linalgError_t complexmatrix_promote(objectmatrix *x, objectcomplexmatrix *y) { - return _stridedcopy(x, y, 0); -} - -/** Copies the real part of a complex matrix y into */ -linalgError_t complexmatrix_demote(objectcomplexmatrix *x, objectmatrix *y, bool imag) { - return _stridedcopy(x, y, (imag?1:0)); -} - -/* ---------------------- - * Complex arithmetic - * ---------------------- */ - -/** Performs c <- alpha*(a*b) + beta*c with complex matrices */ -linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectmatrix *a, objectmatrix *b, MorphoComplex beta, objectmatrix *c) { - if (!(a->ncols==b->nrows && a->nrows==c->nrows && b->ncols==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, - a->nrows, b->ncols, a->ncols, - &alpha, (__LAPACK_double_complex *) a->elements, - a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, - &beta, (__LAPACK_double_complex *) c->elements, c->nrows); - return LINALGERR_OK; -} - -/** Scales a matrix x <- scale * x >*/ -void complematrix_scale(objectmatrix *a, MorphoComplex scale) { - cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); -} - -/** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ -linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { - if (!(a->ncols==b->ncols && a->nrows==b->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, - (__LAPACK_double_complex *) b->elements, 1, - (__LAPACK_double_complex *) out); - return LINALGERR_OK; -} - -/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ -linalgError_t complexmatrix_r1update(MorphoComplex alpha, objectcomplexmatrix *a, objectcomplexmatrix *b, objectcomplexmatrix *c) { - MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; - if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_zgeru(CblasColMajor, m, n, (__LAPACK_double_complex *) &alpha, (__LAPACK_double_complex *) a->elements, 1, - (__LAPACK_double_complex *) b->elements, 1, - (__LAPACK_double_complex *) c->elements, c->nrows); - return LINALGERR_OK; -} - -/** Calculate the trace of a matrix */ -linalgError_t complexmatrix_trace(objectcomplexmatrix *a, MorphoComplex *out) { - if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; - MorphoComplex one = MCBuild(1.0, 0.0); - cblas_zdotu_sub(a->nrows, (__LAPACK_double_complex *) a->elements, a->ncols+1, (__LAPACK_double_complex *) &one, 0, (__LAPACK_double_complex *) out); - return LINALGERR_OK; -} - -/** Inverts the matrix a - * @param[in] a matrix to be inverted - * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { - int nrows=a->nrows, ncols=a->ncols, info; - int pivot[nrows]; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); -#else - zgetrf_(&nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, pivot, &info); -#endif - if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); -#else - int lwork=nrows*ncols; __LAPACK_double_complex work[nrows*ncols]; - zgetri_(&nrows, (__LAPACK_double_complex *) a->elements, &nrows, pivot, work, &lwork, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/* ********************************************************************** - * ComplexMatrix constructors - * ********************************************************************** */ - -value complexmatrix_constructor__int_int(vm *v, int nargs, value *args) { - MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - MatrixIdx_t ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - - objectcomplexmatrix *new=complexmatrix_new(nrows, ncols, true); - return morpho_wrapandbind(v, (object *) new); -} - -value complexmatrix_constructor__int(vm *v, int nargs, value *args) { - MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - - objectcomplexmatrix *new=complexmatrix_new(nrows, 1, true); - return morpho_wrapandbind(v, (object *) new); -} - -value complematrix_constructor__matrix(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); - if (new) complexmatrix_promote(a, new); - return morpho_wrapandbind(v, (object *) new); -} - -/** Constructs a complexmatrix from a list of lists or tuples */ -value complexmatrix_constructor__list(vm *v, int nargs, value *args) { - objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_COMPLEXMATRIX, 2); - return morpho_wrapandbind(v, (object *) new); -} - -/** Constructs a matrix from an array */ -value complexmatrix_constructor__array(vm *v, int nargs, value *args) { - objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); - if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - - objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_COMPLEXMATRIX, 2); - return morpho_wrapandbind(v, (object *) new); -} - -/* ********************************************************************** - * ComplexMatrix veneer class - * ********************************************************************** */ - -/* ---------------------- - * Arithmetic - * ---------------------- */ - -/** Add a vector */ -static value _axpy(vm *v, int nargs, value *args, double alpha) { - objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; - - if (a->ncols==b->ncols && a->nrows==b->nrows) { - objectcomplexmatrix *new=complexmatrix_new(a->nrows, a->ncols, true); - if (new) { - complexmatrix_promote(b, new); - matrix_axpy(alpha, a, new); - } - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - return out; -} - -value ComplexMatrix_add__matrix(vm *v, int nargs, value *args) { - return _axpy(v, nargs, args, 1.0); -} - -value ComplexMatrix_sub__matrix(vm *v, int nargs, value *args) { - value out = _axpy(v, nargs, args, -1.0); - if (matrix_isamatrix(out)) matrix_scale(MORPHO_GETMATRIX(out), -1.0); // -(-A + B) - return out; -} - -value ComplexMatrix_subr__matrix(vm *v, int nargs, value *args) { - return _axpy(v, nargs, args, -1.0); -} - -value ComplexMatrix_mul__complex(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - objectmatrix *new = matrix_clone(a); - if (new) complematrix_scale(new, MORPHO_GETCOMPLEX(MORPHO_GETARG(args, 0))->Z); - return morpho_wrapandbind(v, (object *) new); -} - -/** Multiplication by a complexmatrix or a regular matrix */ -static bool _promote(vm *v, objectmatrix *b, objectmatrix **bp) { // Promotes b to a complexmatrix - *bp=complexmatrix_new(b->nrows, b->ncols, true); - if (!*bp) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return false; } - return complexmatrix_promote(b, *bp)==LINALGERR_OK; -} - -static value _axb(vm *v, objectmatrix *a, objectmatrix *b) { // Performs a*b returning a wrapped value - if (a->ncols!=b->nrows) { morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); return MORPHO_NIL; } - objectcomplexmatrix *new=complexmatrix_new(a->nrows, b->ncols, false); - if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - complexmatrix_mmul(MCBuild(1.0, 0.0), a, b, MCBuild(0.0, 0.0), new); - return morpho_wrapandbind(v, (object *) new); -} - -static value _mul(vm *v, value a, value b, bool promoteb, bool swap) { // Driver routine for a*b - objectmatrix *A=MORPHO_GETMATRIX(a), *B=MORPHO_GETMATRIX(b), *bp=NULL; - if (promoteb) { if (_promote(v, B, &bp)) { B=bp; } else { return MORPHO_NIL; } } // Promote b if requested - value out = (swap ? _axb(v, B, A) : _axb(v, A, B)); // Multiply, swapping arguments if requested - if (bp) object_free((object *) bp); - return out; -} - -value ComplexMatrix_mul__complexmatrix(vm *v, int nargs, value *args) { - return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), false, false); -} - -value ComplexMatrix_mul__matrix(vm *v, int nargs, value *args) { - return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, false); -} - -value ComplexMatrix_mulr__matrix(vm *v, int nargs, value *args) { - return _mul(v, MORPHO_SELF(args), MORPHO_GETARG(args, 0), true, true); -} - -value ComplexMatrix_div__matrix(vm *v, int nargs, value *args) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)), *A=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *ap=NULL; - objectmatrix *new=matrix_clone(b); - if (new && _promote(v, A, &ap)) matrix_solve(ap, new); - return morpho_wrapandbind(v, (object *) new); -} - -value ComplexMatrix_divr__matrix(vm *v, int nargs, value *args) { - objectmatrix *A=MORPHO_GETMATRIX(MORPHO_SELF(args)), *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)), *bp=NULL; - if (_promote(v, b, &bp)) matrix_solve(A, bp); // Promote the matrix that will contain the solution anyway - return morpho_wrapandbind(v, (object *) bp); -} - -/** Computes the trace */ -value ComplexMatrix_trace(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - MorphoComplex tr=MCBuild(0,0); - LINALG_ERRCHECKVM(complexmatrix_trace(a, &tr)); - objectcomplex *new = object_newcomplex(creal(tr), cimag(tr)); - return morpho_wrapandbind(v, (object *) new); -} - -/** Inverts a matrix */ -value ComplexMatrix_inverse(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - value out=MORPHO_NIL; - - objectcomplexmatrix *new = matrix_clone(a); - out = morpho_wrapandbind(v, (object *) new); - if (new) LINALG_ERRCHECKVM(complexmatrix_inverse(new)); - - return out; -} - -static value _realimag(vm *v, int nargs, value *args, bool imag) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new=matrix_new(a->nrows, a->ncols, false); - if (new) complexmatrix_demote(a, new, imag); - return morpho_wrapandbind(v, (object *) new); -} - -/** Extract real part */ -value ComplexMatrix_real(vm *v, int nargs, value *args) { - return _realimag(v, nargs, args, false); -} - -/** Extract imaginary part */ -value ComplexMatrix_imag(vm *v, int nargs, value *args) { - return _realimag(v, nargs, args, true); -} - -static value _conj(vm *v, int nargs, value *args, bool trans) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new=matrix_clone(a); - if (new) { - if (trans) matrix_transpose(a, new); - cblas_dscal(a->nrows*a->ncols, -1.0, new->elements+1, new->nvals); - } - return morpho_wrapandbind(v, (object *) new); -} - -/** Extract imaginary part */ -value ComplexMatrix_conj(vm *v, int nargs, value *args) { - return _conj(v, nargs, args, false); -} - -/** Return conjugate transpose */ -value ComplexMatrix_conjTranspose(vm *v, int nargs, value *args) { - return _conj(v, nargs, args, true); -} - -/* --------- - * Products - * --------- */ - -/** Frobenius inner product */ -value ComplexMatrix_inner(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - MorphoComplex prod=MCBuild(0.0, 0.0); - value out = MORPHO_NIL; - - if (complexmatrix_inner(a, b, &prod)==LINALGERR_OK) { - objectcomplex *new = object_newcomplex(creal(prod), cimag(prod)); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - - return out; -} - -/** Outer product */ -value ComplexMatrix_outer(vm *v, int nargs, value *args) { - objectcomplexmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectcomplexmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - objectcomplexmatrix *new=complexmatrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); - if (new) LINALG_ERRCHECKVM(complexmatrix_r1update(MCBuild(1.0,0.0), a, b, new)); - - return morpho_wrapandbind(v, (object *) new); -} - -MORPHO_BEGINCLASS(ComplexMatrix) -MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(ComplexMatrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "ComplexMatrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Complex (Int, Int)", Matrix_index_int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "ComplexMatrix (_,_)", Matrix_index_x_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,ComplexMatrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "ComplexMatrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, ComplexMatrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "ComplexMatrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_subr__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_mul__complexmatrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mul__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_mulr__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (Complex)", ComplexMatrix_mul__complex, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "ComplexMatrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "ComplexMatrix (ComplexMatrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIVR_METHOD, "ComplexMatrix (Matrix)", ComplexMatrix_divr__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, ComplexMatrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "ComplexMatrix ()", ComplexMatrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Complex ()", Matrix_sum, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Complex ()", ComplexMatrix_trace, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "ComplexMatrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEX_REAL_METHOD, "Matrix ()", ComplexMatrix_real, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEX_IMAG_METHOD, "Matrix ()", ComplexMatrix_imag, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEX_CONJUGATE_METHOD, "ComplexMatrix ()", ComplexMatrix_conj, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(COMPLEXMATRIX_CONJTRANSPOSE_METHOD, "ComplexMatrix ()", ComplexMatrix_conjTranspose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Complex (Matrix)", ComplexMatrix_inner, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "ComplexMatrix (ComplexMatrix)", ComplexMatrix_outer, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "ComplexMatrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) -MORPHO_ENDCLASS - -/* ********************************************************************** - * Initialization - * ********************************************************************** */ - -void complexmatrix_initialize(void) { - objectcomplexmatrixtype=object_addtype(&objectmatrixdefn); - matrix_addinterface(&complexmatrixdefn); - - objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); - value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); - - value complexmatrixclass=builtin_addclass(COMPLEXMATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(ComplexMatrix), objclass); - object_setveneerclass(OBJECT_COMPLEXMATRIX, complexmatrixclass); - - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int, Int)", complexmatrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Int)", complexmatrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (ComplexMatrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Matrix)", complematrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (List)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Tuple)", complexmatrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(COMPLEXMATRIX_CLASSNAME, "ComplexMatrix (Array)", complexmatrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); -} diff --git a/newlinalg/src/complexmatrix.h b/newlinalg/src/complexmatrix.h deleted file mode 100644 index cdb7bdd8..00000000 --- a/newlinalg/src/complexmatrix.h +++ /dev/null @@ -1,20 +0,0 @@ -/** @file complexmatrix.h - * @author T J Atherton - * - * @brief New linear algebra library -*/ - -#ifndef complexmatrix_h -#define complexmatrix_h - -/* ------------------------------------------------------- - * ComplexMatrix veneer class - * ------------------------------------------------------- */ - -#define COMPLEXMATRIX_CLASSNAME "ComplexMatrix" - -#define COMPLEXMATRIX_CONJTRANSPOSE_METHOD "conjTranspose" - -void complexmatrix_initialize(void); - -#endif diff --git a/newlinalg/src/matrix.c b/newlinalg/src/matrix.c deleted file mode 100644 index 8c725680..00000000 --- a/newlinalg/src/matrix.c +++ /dev/null @@ -1,1488 +0,0 @@ -/** @file matrix.c - * @author T J Atherton - * - * @brief New matrices -*/ - -#define ACCELERATE_NEW_LAPACK -#define MORPHO_INCLUDE_LINALG - -#include "newlinalg.h" -#include "format.h" - -/* ********************************************************************** - * Matrix interface definitions - * ********************************************************************** */ - -/** Hold the matrix interface definitions as they're created */ -static matrixinterfacedefn _matrixdefn[LINALG_MAXMATRIXDEFNS]; -objecttype matrixinterfacedefnnext=0; /** Type of the next object definition */ - -void matrix_addinterface(matrixinterfacedefn *defn) { - if (matrixinterfacedefnnextobj.type-OBJECT_MATRIX; - if (iindxtype-OBJECT_MATRIX; - return iindx>=0 && iindxnels; -} - -void objectmatrix_printfn(object *obj, void *v) { - objectclass *klass=object_getveneerclass(obj->type); - morpho_printf(v, "<"); - morpho_printvalue(v, klass->name); - morpho_printf(v, ">"); -} - -objecttypedefn objectmatrixdefn = { - .printfn=objectmatrix_printfn, - .markfn=NULL, - .freefn=NULL, - .sizefn=objectmatrix_sizefn, - .hashfn=NULL, - .cmpfn=NULL -}; - -/* ********************************************************************** - * Matrix utility functions - * ********************************************************************** */ - -/* ---------------------- - * Matrix interface - * ---------------------- */ - -static void _printelfn(vm *v, double *el) { - double val=*el; - morpho_printf(v, "%g", (fabs(val)nrows, ncols=a->ncols; - -#ifdef MORPHO_LINALG_USE_LAPACKE - return LAPACKE_dlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); -#else - double work[a->nrows]; - return dlange_(&cnrm, &nrows, &ncols, a->elements, &nrows, work); -#endif -} - -/** Low level linear solve */ -static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { - int n=a->nrows, nrhs = b->ncols, info; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); -#else - dgesv_(&n, &nrhs, a->elements, &n, pivot, b->elements, &n, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level eigensolver */ -static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { - int info, n=a->nrows; - double wr[n], wi[n]; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, wr, wi, NULL, n, (vec ? vec->elements : NULL), n); -#else - int lwork=4*n; double work[4*n]; - dgeev_("N", (vec ? "V" : "N"), &n, a->elements, &n, wr, wi, NULL, &n, (vec ? vec->elements : NULL), &n, work, &lwork, &info); -#endif - for (int i=0; i0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level SVD */ -static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmatrix *vt) { - int info, m=a->nrows, n=a->ncols; - int minmn = (m < n) ? m : n; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, - (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U - (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT - m, n, - a->elements, m, // input matrix A (overwritten) - s, // singular values (min(m,n)) - (u ? u->elements : NULL), m, // U matrix (m×m) - (vt ? vt->elements : NULL), n // VT matrix (n×n) - ); -#else - int lwork = -1; - double work_query; - // Query optimal work size - dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, - (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, - &work_query, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); - - lwork = (int)work_query; - double work[lwork]; - dgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, a->elements, &m, s, - (u ? u->elements : NULL), &m, (vt ? vt->elements : NULL), &n, - work, &lwork, &info); -#endif - - return (info == 0 ? LINALGERR_OK : (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Low level QR decomposition without pivoting */ -static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { - int info, m=a->nrows, n=a->ncols; - int minmn = (m < n) ? m : n; - double tau[minmn]; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_dgeqrf(LAPACK_COL_MAJOR, m, n, a->elements, m, tau); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#else - int lwork = -1; - double work_query; - - // Query optimal work size for DGEQRF, which is reused for DORGQR - dgeqrf_(&m, &n, a->elements, &m, tau, &work_query, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); - - int lwork_geqrf = (int) work_query; - double work[lwork_geqrf]; - lwork = lwork_geqrf; - - // Compute QR factorization without pivoting - dgeqrf_(&m, &n, a->elements, &m, tau, work, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#endif - - // Extract R (upper triangle of a) into r - // Copy entire matrix first, then zero out below the diagonal - matrix_copy(a, r); - // Only process columns where there are rows below the diagonal (j < m - 1) - for (int j = 0; j < n && j < m - 1; j++) { - memset(&r->elements[j * m + (j + 1)], 0, (m - j - 1) * sizeof(double)); - } - - // Generate Q from reflectors - if (q) { - // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) - // DGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns - for (int j = 0; j < n; j++) cblas_dcopy(m, &a->elements[j * m], 1, &q->elements[j * m], 1); - -#ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_dorgqr(LAPACK_COL_MAJOR, m, minmn, minmn, q->elements, m, tau); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#else - lwork = lwork_geqrf; - dorgqr_(&m, &minmn, &minmn, q->elements, &m, tau, work, &lwork, &info); - if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); -#endif - - // If Q should be m×m, zero out remaining columns if m > minmn - // DORGQR only generates the first minmn columns, so we zero the rest - if (m > minmn) memset(&q->elements[minmn * m], 0, (m - minmn) * m * sizeof(double)); - } - - return LINALGERR_OK; -} - -/* ---------------------- - * Interface definition - * ---------------------- */ - -matrixinterfacedefn matrixdefn = { - .printelfn = _printelfn, - .printeltobufffn = _printeltobufffn, - .getelfn = _getelfn, - .setelfn = _setelfn, - .normfn = _normfn, - .solvefn = _solve, - .eigenfn = _eigen, - .svdfn = _svd, - .qrfn = _qr -}; - -/* ---------------------- - * Constructors - * ---------------------- */ - -/** Create a generic matrix with given type and layout */ -objectmatrix *matrix_newwithtype(objecttype type, MatrixIdx_t nrows, MatrixIdx_t ncols, MatrixIdx_t nvals, bool zero) { - MatrixCount_t nels = nrows*ncols*nvals; - objectmatrix *new = (objectmatrix *) object_new(sizeof(objectmatrix) + nels*sizeof(double), type); - - if (new) { - new->nrows=nrows; - new->ncols=ncols; - new->nvals=nvals; - new->nels=nels; - new->elements=new->matrixdata; - if (zero) memset(new->elements, 0, nels*sizeof(double)); - } - - return new; -} - -/** Create a new real matrix */ -objectmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { - return matrix_newwithtype(OBJECT_MATRIX, nrows, ncols, 1, zero); -} - -/** Clone a matrix */ -objectmatrix *matrix_clone(objectmatrix *in) { - objectmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); - - if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); - return new; -} - -static bool _getelement(value v, int i, value *out) { - if (MORPHO_ISLIST(v)) { - return list_getelement(MORPHO_GETLIST(v), i, out); - } else if (MORPHO_ISTUPLE(v)) { - return tuple_getelement(MORPHO_GETTUPLE(v), i, out); - } else if (MORPHO_ISNUMBER(v) || MORPHO_ISCOMPLEX(v)) { - if (i==0) { *out = v; return true; } - } - return false; -} - -static bool _length(value v, int *len) { - if (MORPHO_ISLIST(v)) { - *len = list_length(MORPHO_GETLIST(v)); return true; - } else if (MORPHO_ISTUPLE(v)) { - *len = tuple_length(MORPHO_GETTUPLE(v)); return true; - } else if (MORPHO_ISNUMBER(v) || MORPHO_ISCOMPLEX(v)) { - *len = 1; return true; - } - return false; -} - -/** Create a matrix from a list of lists (or tuples) */ -objectmatrix *matrix_listconstructor(vm *v, value lst, objecttype type, MatrixIdx_t nvals) { - value iel, jel; - - int nrows=0, ncols=0, rlen; - _length(lst, &nrows); - for (int i=0; incols) { - ncols=rlen; - } - } - - objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); - if (!new) return NULL; - - for (int i=0; isetelfn(v, jel, new->elements+(j*nrows + i)*new->nvals); - } - } - } - - return new; -} - -/** Construct a matrix from an array */ -objectmatrix *matrix_arrayconstructor(vm *v, objectarray *a, objecttype type, MatrixIdx_t nvals) { - int nrows = MORPHO_GETINTEGERVALUE(a->dimensions[0]); - int ncols = MORPHO_GETINTEGERVALUE(a->dimensions[1]); - - objectmatrix *new=matrix_newwithtype(type, nrows, ncols, nvals, true); - if (!new) return NULL; - - for (int i=0; isetelfn(v, el, new->elements+(j*nrows + i)*new->nvals); - } - } - } - return new; -} - -/* ---------------------- - * Accessing elements - * ---------------------- */ - -/** @brief Sets a matrix element. - @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t matrix_setelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - matrix->elements[matrix->nvals*(col*matrix->nrows+row)]=value; - return LINALGERR_OK; -} - -/** @brief Gets a matrix element - * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t matrix_getelement(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double *value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - if (value) *value=matrix->elements[matrix->nvals*(col*matrix->nrows+row)]; - return LINALGERR_OK; -} - -/** @brief Gets a pointer to a matrix element - * @returns true if the element is in the range of the matrix, false otherwise */ -linalgError_t matrix_getelementptr(objectmatrix *matrix, MatrixIdx_t row, MatrixIdx_t col, double **value) { - if (!(colncols && rownrows)) return LINALGERR_INDX_OUT_OF_BNDS; - - if (value) *value=matrix->elements+matrix->nvals*(col*matrix->nrows+row); - return LINALGERR_OK; -} - -/** Copies the column col of matrix a into the column vector b */ -linalgError_t matrix_getcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { - if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; - if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col*a->nrows, 1, b->elements, 1); - return LINALGERR_OK; -} - -/** Copies the column vector b into column col of matrix a */ -linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b) { - if (col<0 || col>=a->ncols) return LINALGERR_INDX_OUT_OF_BNDS; - if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col*a->nrows, 1); - return LINALGERR_OK; -} - -/* ---------------------- - * Arithmetic operations - * ---------------------- */ - -/** Vector addition: Performs y <- alpha*x + y */ -linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y) { - if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); - return LINALGERR_OK; -} - -/** Copies a matrix y <- x */ -linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y) { - if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); - return LINALGERR_OK; -} - -/** Scales a matrix x <- scale * x >*/ -void matrix_scale(objectmatrix *x, double scale) { - cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); -} - -/** Loads the identity matrix a <- I(n) */ -linalgError_t matrix_identity(objectmatrix *x) { - if (x->ncols!=x->nrows) return LINALGERR_NOT_SQUARE; - memset(x->elements, 0, sizeof(double)*x->nrows*x->ncols); - for (int i=0; inrows; i++) x->elements[x->nvals*(i+x->nrows*i)]=1.0; - return LINALGERR_OK; -} - -/** Performs z <- alpha*(x*y) + beta*z */ -linalgError_t matrix_mmul(double alpha, objectmatrix *x, objectmatrix *y, double beta, objectmatrix *z) { - if (!(x->ncols==y->nrows && x->nrows==z->nrows && y->ncols==z->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, x->nrows, y->ncols, x->ncols, alpha, x->elements, x->nrows, y->elements, y->nrows, beta, z->elements, z->nrows); - return LINALGERR_OK; -} - -/** Performs x <- alpha*x + beta */ -linalgError_t matrix_addscalar(objectmatrix *x, double alpha, double beta) { - for (MatrixCount_t i=0; incols*x->nrows; i++) { - for (int k=0; knvals; k++) { - x->elements[i*x->nvals+k]*=alpha; - if (k==0) x->elements[i*x->nvals+k]+=beta; - } - } - return LINALGERR_OK; -} - -/** Performs y <- x^T>*/ -linalgError_t matrix_transpose(objectmatrix *x, objectmatrix *y) { - if (!(x->ncols==y->nrows && x->nrows==y->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - - for (MatrixCount_t i=0; incols; i++) { - for (MatrixCount_t j=0; jnrows; j++) { - for (int k=0; knvals; k++) { - y->elements[j*y->nrows*y->nvals+i*y->nvals+k] = x->elements[i*x->nrows*x->nvals+j*x->nvals+k]; - } - } - } - return LINALGERR_OK; -} - -/* ---------------------- - * Unary operations - * ---------------------- */ - -/** Computes various matrix norms */ -double matrix_norm(objectmatrix *a, matrix_norm_t norm) { - return matrix_getinterface(a)->normfn(a, norm); -} - -/** Computes the sum of all elements in a matrix */ -void matrix_sum(objectmatrix *a, double *sum) { - double c[a->nvals], y, t; - for (int i=0; invals; i++) { sum[i]=0; c[i]=0; } - - for (MatrixCount_t i=0; inels; i+=a->nvals) { - for (int k=0; knvals; k++) { - y=a->elements[i+k]-c[k]; - t=sum[k]+y; - c[k]=(t-sum[k])-y; - sum[k]=t; - } - } -} - -/** Calculate the trace of a matrix */ -linalgError_t matrix_trace(objectmatrix *a, double *out) { - if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; - *out = 0.0; - for (int i = 0; i < a->nrows; i++) { - *out += a->elements[a->nvals * (i * a->nrows + i)]; - } - - return LINALGERR_OK; -} - -/* ---------------------- - * Binary operations - * ---------------------- */ - -/** Finds the Frobenius inner product of two matrices */ -linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out) { - if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - - *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); - return LINALGERR_OK; -} - -/** Rank 1 update: Performs c <- alpha*a \outer b + c; a and b are treated as column vectors */ -linalgError_t matrix_r1update(double alpha, objectmatrix *a, objectmatrix *b, objectmatrix *c) { - MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; - if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - - cblas_dger(CblasColMajor, m, n, alpha, a->elements, 1, b->elements, 1, c->elements, c->nrows); - return LINALGERR_OK; -} - -/** Solve the linear system a.x = b using stack allocated memory for temporary */ -linalgError_t matrix_solvesmall(objectmatrix *a, objectmatrix *b) { - int pivot[a->nrows]; - double els[a->nels]; - objectmatrix A = MORPHO_STATICMATRIX(els, a->nrows, a->ncols); - matrix_copy(a, &A); - return (matrix_getinterface(a)->solvefn) (&A, b, pivot); -} - -/** Solve the linear system a.x = b using heap allocated memory for temporary */ -linalgError_t matrix_solvelarge(objectmatrix *a, objectmatrix *b) { - int *pivot = MORPHO_MALLOC(sizeof(int)*a->nrows); - objectmatrix *A = matrix_clone(a); - linalgError_t out = LINALGERR_ALLOC; - if (pivot && A) { - out = (matrix_getinterface(a)->solvefn) (A, b, pivot); - } - if (A) object_free((object *) A); - if (pivot) MORPHO_FREE(pivot); - return out; -} - -/** Solve the linear system a.x = b; automatrically allocates storage depending on size of the matrix - * @param[in] a lhs - * @param[in|out] b rhs — overwritten by the solution - * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t matrix_solve(objectmatrix *a, objectmatrix *b) { - if (MATRIX_ISSMALL(a)) return matrix_solvesmall(a, b); - else return matrix_solvelarge(a, b); -} - -/** Inverts the matrix a - * @param[in] a matrix to be inverted - * @returns linalgError_t indicating the status; MATRIX_OK indicates success. */ -linalgError_t matrix_inverse(objectmatrix *a) { - int nrows=a->nrows, ncols=a->ncols, info; - int pivot[nrows]; - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); -#else - dgetrf_(&nrows, &ncols, a->elements, &nrows, pivot, &info); -#endif - if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); - -#ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_dgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); -#else - int lwork=nrows*ncols; double work[nrows*ncols]; - dgetri_(&nrows, a->elements, &nrows, pivot, work, &lwork, &info); -#endif - - return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); -} - -/** Interface to eigensystem */ -linalgError_t matrix_eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec) { - if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; - if (vec && ((a->nrows!=vec->nrows) || (a->nrows!=vec->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - - matrix_eigenfn_t efn = matrix_getinterface(a)->eigenfn; - if (!efn) return LINALGERR_NOT_SUPPORTED; - - objectmatrix *temp = matrix_clone(a); - if (!temp) return LINALGERR_ALLOC; - - return efn(temp, w, vec); -} - -/* ---------------------- - * Display - * ---------------------- */ - -/** Prints a matrix */ -void matrix_print(vm *v, objectmatrix *m) { - matrixinterfacedefn *interface=matrix_getinterface(m); - double *elptr; - for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m - morpho_printf(v, "[ "); - for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - matrix_getelementptr(m, i, j, &elptr); - (*interface->printelfn) (v, elptr); - morpho_printf(v, " "); - } - morpho_printf(v, "]%s", (inrows-1 ? "\n" : "")); - } -} - -/** Prints a matrix to a buffer */ -bool matrix_printtobuffer(objectmatrix *m, char *format, varray_char *out) { - matrixinterfacedefn *interface=matrix_getinterface(m); - double *elptr; - for (MatrixIdx_t i=0; inrows; i++) { // Rows run from 0...m - varray_charadd(out, "[ ", 2); - - for (MatrixIdx_t j=0; jncols; j++) { // Columns run from 0...k - matrix_getelementptr(m, i, j, &elptr); - if (!(*interface->printeltobufffn) (out, format, elptr)) return false; - varray_charadd(out, " ", 1); - } - varray_charadd(out, "]", 1); - if (inrows-1) varray_charadd(out, "\n", 1); - } - return true; -} - -/* ---------------------- - * Roll - * ---------------------- */ - -/** Rolls the matrix list */ -static void _rollflat(objectmatrix *a, objectmatrix *b, int nplaces) { - MatrixCount_t N=a->nrows*a->ncols*a->nvals; - MatrixCount_t n = abs(nplaces)*a->nvals; - if (n>N) n = n % N; - MatrixCount_t Np = N - n; // Number of elements to roll - - if (nplaces<0) { - memcpy(b->matrixdata, a->matrixdata+n, sizeof(double)*Np); - memcpy(b->matrixdata+Np, a->matrixdata, sizeof(double)*n); - } else { - memcpy(b->matrixdata+n, a->matrixdata, sizeof(double)*Np); - if (n>0) memcpy(b->matrixdata, a->matrixdata+Np, sizeof(double)*n); - } -} - -/** Copies a arow from matrix a into brow for matrix b */ -static void _copyrow(objectmatrix *a, MatrixIdx_t arow, objectmatrix *b, MatrixIdx_t brow) { - for (MatrixIdx_t i=0; incols; i++) - memcpy(b->elements+b->nvals*(i*b->nrows+brow), a->elements+a->nvals*(i*a->nrows+arow), sizeof(double)*a->nvals); -} - -/** Rolls a list by a number of elements along a given axis; stores the result in b */ -linalgError_t matrix_roll(objectmatrix *a, int nplaces, int axis, objectmatrix *b) { - if (!(a->nrows==b->nrows && a->ncols==b->ncols && a->nvals==b->nvals)) return LINALGERR_INCOMPATIBLE_DIM; - - switch(axis) { - case 0: - for (int i=0; inrows; i++) { - int j = (i+nplaces); - while (j<0) j+=a->nrows; - _copyrow(a, i, b, j % a->nrows); - } - break; - case 1: _rollflat(a, b, nplaces*a->nrows); break; - default: return LINALGERR_NOT_SUPPORTED; - } - - return LINALGERR_OK; -} - -/* ********************************************************************** - * Matrix constructors - * ********************************************************************** */ - -value matrix_constructor__int_int(vm *v, int nargs, value *args) { - MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - - objectmatrix *new=matrix_new(nrows, ncols, true); - return morpho_wrapandbind(v, (object *) new); -} - -value matrix_constructor__int(vm *v, int nargs, value *args) { - MatrixIdx_t nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - - objectmatrix *new=matrix_new(nrows, 1, true); - return morpho_wrapandbind(v, (object *) new); -} - -/** Clones a matrix */ -value matrix_constructor__matrix(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - return morpho_wrapandbind(v, (object *) matrix_clone(a)); -} - -/** Constructs a matrix from a list of lists or tuples */ -value matrix_constructor__list(vm *v, int nargs, value *args) { - objectmatrix *new = matrix_listconstructor(v, MORPHO_GETARG(args, 0), OBJECT_MATRIX, 1); - return morpho_wrapandbind(v, (object *) new); -} - -/** Constructs a matrix from an array */ -value matrix_constructor__array(vm *v, int nargs, value *args) { - objectarray *a = MORPHO_GETARRAY(MORPHO_GETARG(args, 0)); - if (a->ndim!=2) { morpho_runtimeerror(v, LINALG_INVLDARGS); return MORPHO_NIL; } - - objectmatrix *new = matrix_arrayconstructor(v, a, OBJECT_MATRIX, 1); - return morpho_wrapandbind(v, (object *) new); -} - -value matrix_constructor__err(vm *v, int nargs, value *args) { - morpho_runtimeerror(v, MATRIX_CONSTRUCTOR); - return MORPHO_NIL; -} - -/** Creates an identity matrix */ -value matrix_identityconstructor(vm *v, int nargs, value *args) { - MatrixIdx_t n = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - - objectmatrix *new = matrix_new(n,n,false); - if (new) matrix_identity(new); - - return morpho_wrapandbind(v, (object *) new); -} - -/* ********************************************************************** - * Matrix veneer class - * ********************************************************************** */ - -/* ---------------------- - * Common utility methods - * ---------------------- */ - -/** Prints a matrix */ -value Matrix_print(vm *v, int nargs, value *args) { - objectmatrix *m=MORPHO_GETMATRIX(MORPHO_SELF(args)); - matrix_print(v, m); - return MORPHO_NIL; -} - -/** Formatted conversion to a string */ -value Matrix_format(vm *v, int nargs, value *args) { - value out=MORPHO_NIL; - varray_char str; - varray_charinit(&str); - - if (matrix_printtobuffer(MORPHO_GETMATRIX(MORPHO_SELF(args)), - MORPHO_GETCSTRING(MORPHO_GETARG(args, 0)), - &str)) { - out = object_stringfromvarraychar(&str); - if (MORPHO_ISOBJECT(out)) morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - - varray_charclear(&str); - return out; -} - -/** Copies the contents of one matrix into another */ -value Matrix_assign(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - LINALG_ERRCHECKVM(matrix_copy(b, a)); - return MORPHO_NIL; -} - -/** Clones a matrix */ -value Matrix_clone(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new=matrix_clone(a); - return morpho_wrapandbind(v, (object *) new); -} - -/* --------- - * index() - * --------- */ - -value Matrix_index_int_int(vm *v, int nargs, value *args) { - objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - value out=MORPHO_NIL; - - double *elptr=NULL; - LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); - - if (elptr) out=matrix_getinterface(m)->getelfn(v, elptr); - return out; -} - -static linalgError_t _slice_count(value in, MatrixIdx_t *count) { - if (morpho_isnumber(in)) { *count=1; return LINALGERR_OK; } - else if (MORPHO_ISRANGE(in)) { *count = range_count(MORPHO_GETRANGE(in)); return LINALGERR_OK; } - return LINALGERR_NON_NUMERICAL; -} - -static linalgError_t _slice_iterate(value in, unsigned int i, MatrixIdx_t *ix) { - value val=in; - if (MORPHO_ISRANGE(in)) val=range_iterate(MORPHO_GETRANGE(in), i); - - if (MORPHO_ISINTEGER(val)) { *ix=MORPHO_GETINTEGERVALUE(val); return LINALGERR_OK; } - else if (MORPHO_ISFLOAT(val)) { *ix=(MatrixIdx_t) MORPHO_GETFLOATVALUE(val); return LINALGERR_OK; } - return LINALGERR_OP_FAILED; -} - -static linalgError_t _slice_validate(value iv, value jv, MatrixIdx_t *icnt, MatrixIdx_t *jcnt) { - LINALG_ERRCHECKRETURN(_slice_count(iv, icnt)); - LINALG_ERRCHECKRETURN(_slice_count(jv, jcnt)); - if (*icnt<1 || *jcnt<1) return LINALGERR_INVLD_ARG; - return LINALGERR_OK; -} - -static linalgError_t _slice_copy(value iv, value jv, MatrixIdx_t icnt, MatrixIdx_t jcnt, objectmatrix *a, objectmatrix *b, bool swap) { - double *ael, *bel; - for (MatrixIdx_t j=0; jnvals); - else memcpy(bel, ael, sizeof(double)*b->nvals); - } - } - return LINALGERR_OK; -} - -value Matrix_index_x_x(vm *v, int nargs, value *args) { - objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)), *new=NULL; - value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); - value out=MORPHO_NIL; - - MatrixIdx_t icnt=0, jcnt=0; // Counts become size of new matrix - LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); - - new=matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), icnt, jcnt, m->nvals, false); - if (!new) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); return MORPHO_NIL; } - - linalgError_t err=_slice_copy(iv, jv, icnt, jcnt, m, new, false); - if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); object_free((object *) new); } - else out = morpho_wrapandbind(v, (object *) new); - - return out; -} - -/* --------- - * setindex() - * --------- */ - -static void _setindex(vm *v, objectmatrix *m, MatrixIdx_t i, MatrixIdx_t j, value in) { - double *elptr=NULL; - LINALG_ERRCHECKVM(matrix_getelementptr(m, i, j, &elptr)); - if (elptr) LINALG_ERRCHECKVM(matrix_getinterface(m)->setelfn(v, in, elptr)); -} - -value Matrix_setindex_int_x(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, 0, MORPHO_GETARG(args, 1)); - return MORPHO_NIL; -} - -value Matrix_setindex_int_int_x(vm *v, int nargs, value *args) { - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - MatrixIdx_t j = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - _setindex(v, MORPHO_GETMATRIX(MORPHO_SELF(args)), i, j, MORPHO_GETARG(args, 2)); - return MORPHO_NIL; -} - -value Matrix_setindex_x_x__matrix(vm *v, int nargs, value *args) { - objectmatrix *m = MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *msrc = MORPHO_GETMATRIX(MORPHO_GETARG(args, 2)); - value iv=MORPHO_GETARG(args, 0), jv=MORPHO_GETARG(args, 1); - - MatrixIdx_t icnt=0, jcnt=0; - LINALG_ERRCHECKVMRETURN(_slice_validate(iv, jv, &icnt, &jcnt), MORPHO_NIL); - - LINALG_ERRCHECKVM(_slice_copy(iv, jv, icnt, jcnt, m, msrc, true)); - - return MORPHO_NIL; -} - -/* --------- - * column - * --------- */ - -value Matrix_getcolumn_int(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - MatrixIdx_t i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; - - if (i>=0 && incols) { - objectmatrix *new=matrix_newwithtype(a->obj.type, a->nrows, 1, a->nvals, false); - if (new) matrix_getcolumn(a, i, new); - out=morpho_wrapandbind(v, (object *)new); - } else linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); - - return out; -} - -value Matrix_setcolumn_int__matrix(vm *v, int nargs, value *args) { - LINALG_ERRCHECKVM(matrix_setcolumn(MORPHO_GETMATRIX(MORPHO_SELF(args)), - MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)))); - return MORPHO_NIL; -} - -/* ---------- - * Arithmetic - * ---------- */ - -/** Add a vector */ -static value _axpy(vm *v, int nargs, value *args, double alpha) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); // Receiver is left hand operand - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); // Argument is right hand operand - objectmatrix *new = NULL; - value out=MORPHO_NIL; - - if (a->ncols==b->ncols && a->nrows==b->nrows) { - new=matrix_clone(a); - if (new) LINALG_ERRCHECKVM(matrix_axpy(alpha, b, new)); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - - return out; -} - -/** Add a scalar */ -static value _xpa(vm *v, int nargs, value *args, double sgna, double sgnb) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new=NULL; - value out=MORPHO_NIL; - - double beta; - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &beta)) { - new = matrix_clone(a); - if (new) LINALG_ERRCHECKVM(matrix_addscalar(new, sgna, beta*sgnb)); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INVLDARGS); - - return out; -} - -value Matrix_add__matrix(vm *v, int nargs, value *args) { - return _axpy(v,nargs,args,1.0); -} - -value Matrix_add_nil(vm *v, int nargs, value *args) { - return MORPHO_SELF(args); -} - -value Matrix_add_x(vm *v, int nargs, value *args) { - if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to addr - return _xpa(v,nargs,args,1.0,1.0); -} - -value Matrix_sub__matrix(vm *v, int nargs, value *args) { - return _axpy(v,nargs,args,-1.0); -} - -value Matrix_sub_x(vm *v, int nargs, value *args) { - if (matrix_isamatrix(MORPHO_GETARG(args, 0))) return MORPHO_NIL; // Redirect to subr - return _xpa(v,nargs,args,1.0,-1.0); -} - -value Matrix_subr_x(vm *v, int nargs, value *args) { - return _xpa(v,nargs,args,-1.0,1.0); -} - -value Matrix_mul_float(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - double scale; - if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; - - objectmatrix *new = matrix_clone(a); - if (new) matrix_scale(new, scale); - return morpho_wrapandbind(v, (object *) new); -} - -value Matrix_mul__matrix(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; - - if (a->ncols==b->nrows) { - objectmatrix *new = matrix_new(a->nrows, b->ncols, false); - if (new) LINALG_ERRCHECKVM(matrix_mmul(1.0, a, b, 0.0, new)); - out = morpho_wrapandbind(v, (object *) new); - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - return out; -} - -value Matrix_div_float(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - double scale; - if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &scale)) return MORPHO_NIL; - scale = 1.0/scale; - if (isnan(scale)) morpho_runtimeerror(v, VM_DVZR); - - objectmatrix *new = matrix_clone(a); - if (new) matrix_scale(new, scale); - return morpho_wrapandbind(v, (object *) new); -} - -value Matrix_div__matrix(vm *v, int nargs, value *args) { - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_SELF(args)); // Note that the rhs is the receiver - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); // ... the lhs is the argument - - objectmatrix *sol = matrix_clone(b); - if (sol) LINALG_ERRCHECKVM(matrix_solve(a, sol)); - - return morpho_wrapandbind(v, (object *) sol); -} - -/** Accumulate in place */ -value Matrix_acc_x_x__matrix(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 1)); - - double alpha=1.0; - if (!morpho_valuetofloat(MORPHO_GETARG(args, 0), &alpha)) { morpho_runtimeerror(v, MATRIX_ARITHARGS); return MORPHO_NIL; } - - LINALG_ERRCHECKVM(matrix_axpy(alpha, b, a)); - return MORPHO_NIL; -} - -/* ---------------- - * Unary operations - * ---------------- */ - -/** Matrix norm */ -value Matrix_norm_x(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - double n; - - if (morpho_valuetofloat(MORPHO_GETARG(args, 0), &n)) { - if (fabs(n-1.0)nvals]; - - matrix_sum(a, sum); - return matrix_getinterface(a)->getelfn(v, sum); -} - -/** Computes the trace */ -value Matrix_trace(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - double out=0.0; - LINALG_ERRCHECKVM(matrix_trace(a, &out)); - return MORPHO_FLOAT(out); -} - -/** Inverts a matrix */ -value Matrix_transpose(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new = matrix_clone(a); - if (new) { - new->ncols=a->nrows; - new->nrows=a->ncols; - LINALG_ERRCHECKVM(matrix_transpose(a, new)); - } - return morpho_wrapandbind(v, (object *) new); -} - -/** Inverts a matrix */ -value Matrix_inverse(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *new = matrix_clone(a); - if (new) LINALG_ERRCHECKVM(matrix_inverse(new)); - - return morpho_wrapandbind(v, (object *) new); -} - -/* ---------------- - * Eigensystem - * ---------------- */ - -static bool _processeigenvalues(vm *v, MatrixIdx_t n, MorphoComplex *w, value *out) { - value ev[n]; - for (int i=0; incols; - MorphoComplex w[n]; - linalgError_t err=matrix_eigen(a, w, NULL); - if (err==LINALGERR_OK) { - if (_processeigenvalues(v, n, w, &out)) { - morpho_bindobjects(v, 1, &out); - } else morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); - } else linalg_raiseerror(v, err); - - return out; -} - -#define _CHK(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _eigensystem_cleanup; } - -/** Finds the eigenvalues and eigenvectors of a matrix */ -value Matrix_eigensystem(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - value ev=MORPHO_NIL; // Will hold eigenvalues - objectmatrix *evec=NULL; // Holds eigenvectors - objecttuple *otuple=NULL; // Tuple to return everything - - MatrixIdx_t n=a->ncols; - MorphoComplex w[n]; - - evec=matrix_clone(a); - _CHK(evec); - - linalgError_t err=matrix_eigen(a, w, evec); - if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto _eigensystem_cleanup; } - - _CHK(_processeigenvalues(v, n, w, &ev)); - - value outtuple[2] = { ev, MORPHO_OBJECT(evec) }; - otuple = object_newtuple(2, outtuple); - _CHK(otuple); - - return morpho_wrapandbind(v, (object *) otuple); - -_eigensystem_cleanup: - if (evec) object_free((object *) evec); - if (otuple) object_free((object *) otuple); - if (MORPHO_ISOBJECT(ev)) { - value evx; - objecttuple *t = MORPHO_GETTUPLE(ev); - for (int i=0; inrows != u->nrows) || (a->nrows != u->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - if (vt && ((a->ncols != vt->nrows) || (a->ncols != vt->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - - objectmatrix *temp = matrix_clone(a); - if (!temp) return LINALGERR_ALLOC; - - linalgError_t err = matrix_getinterface(a)->svdfn (temp, s, u, vt); - object_free((object *) temp); - return err; -} - -/* ---------------- - * QR decomposition - * ---------------- */ - -/** Interface to QR decomposition */ -linalgError_t matrix_qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { - if (q && ((a->nrows != q->nrows) || (a->nrows != q->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - if (r && ((a->nrows != r->nrows) || (a->ncols != r->ncols))) return LINALGERR_INCOMPATIBLE_DIM; - - objectmatrix *temp = matrix_clone(a); - if (!temp) return LINALGERR_ALLOC; - - linalgError_t err = matrix_getinterface(a)->qrfn (temp, q, r); - object_free((object *) temp); - return err; -} - -/** Processes singular values into a tuple */ -static bool _processsingularvalues(vm *v, MatrixIdx_t n, double *s, value *out) { - value sv[n]; - for (int i = 0; i < n; i++) sv[i] = MORPHO_FLOAT(s[i]); - - objecttuple *new = object_newtuple(n, sv); - if (!new) return false; - - *out = MORPHO_OBJECT(new); - return true; -} - -#define _CHK_SVD(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _svd_cleanup; } -/** Singular Value Decomposition */ -value Matrix_svd(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); - - value s = MORPHO_NIL; // Will hold singular values - objectmatrix *u = NULL; // Left singular vectors - objectmatrix *vt = NULL; // Right singular vectors (transposed) - objecttuple *otuple = NULL; // Tuple to return everything - - MatrixIdx_t m = a->nrows, n = a->ncols; - MatrixIdx_t minmn = (m < n) ? m : n; - double singular_values[minmn]; - - // Allocate U (m×m) and VT (n×n) matrices - u = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); - _CHK_SVD(u); - - vt = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), n, n, a->nvals, false); - _CHK_SVD(vt); - - linalgError_t err = matrix_svd(a, singular_values, u, vt); - if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _svd_cleanup; } - - _CHK_SVD(_processsingularvalues(v, minmn, singular_values, &s)); - - value outtuple[3] = { MORPHO_OBJECT(u), s, MORPHO_OBJECT(vt) }; - otuple = object_newtuple(3, outtuple); - _CHK_SVD(otuple); - - return morpho_wrapandbind(v, (object *) otuple); - -_svd_cleanup: - if (u) object_free((object *) u); - if (vt) object_free((object *) vt); - if (otuple) object_free((object *) otuple); - morpho_freeobject(s); - - return MORPHO_NIL; -} -#undef _CHK_SVD - -/* ---------------- - * QR decomposition - * ---------------- */ - -#define _CHK_QR(x) if (!x) { morpho_runtimeerror(v, ERROR_ALLOCATIONFAILED); goto _qr_cleanup; } -/** QR Decomposition */ -value Matrix_qr(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); - - objectmatrix *q = NULL; // Orthogonal matrix Q - objectmatrix *r = NULL; // Upper triangular matrix R - objecttuple *otuple = NULL; // Tuple to return everything - - MatrixIdx_t m = a->nrows, n = a->ncols; - - // Allocate Q (m×m) and R (m×n) matrices - q = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, m, a->nvals, false); - _CHK_QR(q); - - r = matrix_newwithtype(MORPHO_GETOBJECTTYPE(MORPHO_SELF(args)), m, n, a->nvals, false); - _CHK_QR(r); - - linalgError_t err = matrix_qr(a, q, r); - if (err != LINALGERR_OK) { linalg_raiseerror(v, err); goto _qr_cleanup; } - - value outtuple[2] = { MORPHO_OBJECT(q), MORPHO_OBJECT(r) }; - otuple = object_newtuple(2, outtuple); - _CHK_QR(otuple); - - return morpho_wrapandbind(v, (object *) otuple); - -_qr_cleanup: - if (q) object_free((object *) q); - if (r) object_free((object *) r); - if (otuple) object_free((object *) otuple); - - return MORPHO_NIL; -} -#undef _CHK_QR - -/* --------- - * Products - * --------- */ - -/** Frobenius inner product */ -value Matrix_inner(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - double prod=0.0; - - LINALG_ERRCHECKVM(matrix_inner(a, b, &prod)); - - return MORPHO_FLOAT(prod); -} - -/** Outer product */ -value Matrix_outer(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - objectmatrix *b=MORPHO_GETMATRIX(MORPHO_GETARG(args, 0)); - - objectmatrix *new=matrix_new(a->nrows*a->ncols, b->nrows*b->ncols, true); - if (new) LINALG_ERRCHECKVM(matrix_r1update(1.0, a, b, new)); - - return morpho_wrapandbind(v, (object *) new); -} - -/* --------- - * Metadata - * --------- */ - -/** Reshape a matrix */ -value Matrix_reshape(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - int nrows = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - ncols = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - - if (nrows*ncols==a->nrows*a->ncols) { - a->nrows=nrows; - a->ncols=ncols; - } else morpho_runtimeerror(v, LINALG_INCOMPATIBLEMATRICES); - - return MORPHO_NIL; -} - -static value _roll(vm *v, objectmatrix *a, int roll, int axis) { - objectmatrix *new = matrix_clone(a); - if (new) matrix_roll(a, roll, axis, new); - return morpho_wrapandbind(v, (object *) new); -} - -/** Roll a matrix */ -value Matrix_roll_int_int(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); - int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)), - axis = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 1)); - return _roll(v, a, roll, axis); -} - -/** Roll a matrix by row */ -value Matrix_roll_int(vm *v, int nargs, value *args) { - objectmatrix *a = MORPHO_GETMATRIX(MORPHO_SELF(args)); - int roll = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - return _roll(v, a, roll, 0); -} - -/** Enumerate protocol */ -value Matrix_enumerate(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - int i = MORPHO_GETINTEGERVALUE(MORPHO_GETARG(args, 0)); - value out=MORPHO_NIL; - - if (i<0) { - out=MORPHO_INTEGER(a->ncols*a->nrows); - } else if (incols*a->nrows) { - out=matrix_getinterface(a)->getelfn(v, a->elements+i*a->nvals); - } else { - linalg_raiseerror(v, LINALGERR_INDX_OUT_OF_BNDS); - } - - return out; -} - -/** Number of matrix elements */ -value Matrix_count(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - return MORPHO_INTEGER(a->ncols*a->nrows); -} - -/** Matrix dimensions */ -value Matrix_dimensions(vm *v, int nargs, value *args) { - objectmatrix *a=MORPHO_GETMATRIX(MORPHO_SELF(args)); - - value dim[2] = { MORPHO_INTEGER(a->nrows), MORPHO_INTEGER(a->ncols) }; - objecttuple *new=object_newtuple(2, dim); - - return morpho_wrapandbind(v, (object *) new); -} - -MORPHO_BEGINCLASS(Matrix) -MORPHO_METHOD_SIGNATURE(MORPHO_PRINT_METHOD, "()", Matrix_print, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_FORMAT_METHOD, "(String)", Matrix_format, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ASSIGN_METHOD, "(Matrix)", Matrix_assign, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_CLONE_METHOD, "Matrix ()", Matrix_clone, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int)", Matrix_enumerate, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Float (Int, Int)", Matrix_index_int_int, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_GETINDEX_METHOD, "Matrix (_,_)", Matrix_index_x_x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,_)", Matrix_setindex_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(Int,Int,_)", Matrix_setindex_int_int_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SETINDEX_METHOD, "(_,_,Matrix)", Matrix_setindex_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_GETCOLUMN_METHOD, "Matrix (Int)", Matrix_getcolumn_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SETCOLUMN_METHOD, "(Int, Matrix)", Matrix_setcolumn_int__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Matrix)", Matrix_add__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADD_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (_)", Matrix_add_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ADDR_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Matrix)", Matrix_sub__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (Nil)", Matrix_add_nil, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUB_METHOD, "Matrix (_)", Matrix_sub_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_SUBR_METHOD, "Matrix (_)", Matrix_subr_x, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MUL_METHOD, "Matrix (Matrix)", Matrix_mul__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_MULR_METHOD, "Matrix (_)", Matrix_mul_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (Matrix)", Matrix_div__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_DIV_METHOD, "Matrix (_)", Matrix_div_float, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ACC_METHOD, "(_, Matrix)", Matrix_acc_x_x__matrix, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INVERSE_METHOD, "Matrix ()", Matrix_inverse, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float (_)", Matrix_norm_x, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_NORM_METHOD, "Float ()", Matrix_norm, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_SUM_METHOD, "Float ()", Matrix_sum, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_TRACE_METHOD, "Float ()", Matrix_trace, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_TRANSPOSE_METHOD, "Matrix ()", Matrix_transpose, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_INNER_METHOD, "Float (Matrix)", Matrix_inner, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_OUTER_METHOD, "Matrix (Matrix)", Matrix_outer, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_EIGENVALUES_METHOD, "Tuple ()", Matrix_eigenvalues, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_EIGENSYSTEM_METHOD, "Tuple ()", Matrix_eigensystem, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_SVD_METHOD, "Tuple ()", Matrix_svd, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_QR_METHOD, "Tuple ()", Matrix_qr, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_RESHAPE_METHOD, "(Int,Int)", Matrix_reshape, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int)", Matrix_roll_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MATRIX_ROLL_METHOD, "Matrix (Int,Int)", Matrix_roll_int_int, BUILTIN_FLAGSEMPTY), -MORPHO_METHOD_SIGNATURE(MORPHO_ENUMERATE_METHOD, "(Int)", Matrix_enumerate, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MORPHO_COUNT_METHOD, "Int ()", Matrix_count, MORPHO_FN_PUREFN), -MORPHO_METHOD_SIGNATURE(MATRIX_DIMENSIONS_METHOD, "Tuple ()", Matrix_dimensions, BUILTIN_FLAGSEMPTY) -MORPHO_ENDCLASS - -/* ********************************************************************** - * Initialization - * ********************************************************************** */ - -void matrix_initialize(void) { - objectmatrixtype=object_addtype(&objectmatrixdefn); - matrix_addinterface(&matrixdefn); - - objectstring objname = MORPHO_STATICSTRING(OBJECT_CLASSNAME); - value objclass = builtin_findclass(MORPHO_OBJECT(&objname)); - - value matrixclass=builtin_addclass(MATRIX_CLASSNAME, MORPHO_GETCLASSDEFINITION(Matrix), objclass); - object_setveneerclass(OBJECT_MATRIX, matrixclass); - - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int, Int)", matrix_constructor__int_int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Int)", matrix_constructor__int, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Matrix)", matrix_constructor__matrix, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (List)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Tuple)", matrix_constructor__list, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "Matrix (Array)", matrix_constructor__array, MORPHO_FN_CONSTRUCTOR, NULL); - morpho_addfunction(MATRIX_CLASSNAME, "(...)", matrix_constructor__err, MORPHO_FN_CONSTRUCTOR, NULL); - - morpho_addfunction(MATRIX_IDENTITYCONSTRUCTOR, "Matrix (Int)", matrix_identityconstructor, MORPHO_FN_CONSTRUCTOR, NULL); - - complematrix_initialize(); -} diff --git a/newlinalg/src/matrix.h b/newlinalg/src/matrix.h deleted file mode 100644 index 7fa15bd3..00000000 --- a/newlinalg/src/matrix.h +++ /dev/null @@ -1,236 +0,0 @@ -/** @file matrix.h - * @author T J Atherton - * - * @brief New linear algebra library -*/ - -#ifndef matrix_h -#define matrix_h - -#define LINALG_MAXMATRIXDEFNS 4 - -/* ------------------------------------------------------- - * Matrix object type - * ------------------------------------------------------- */ - -extern objecttype objectmatrixtype; -#define OBJECT_MATRIX objectmatrixtype - -extern objecttypedefn objectmatrixdefn; - -typedef int MatrixIdx_t; // Type used for matrix indices -typedef size_t MatrixCount_t; // Type used to count total number of elements - -/** Matrices are a purely numerical collection type oriented toward linear algebra. - Elements are stored in column-major format, i.e. - [ 1 2 ] - [ 3 4 ] - is stored ( 1, 3, 2, 4 ) in memory. This is for compatibility with standard linear algebra packages */ - -typedef struct { - object obj; - MatrixIdx_t nrows; // Number of rows - MatrixIdx_t ncols; // Number of columns - MatrixIdx_t nvals; // Number of doubles per entry - MatrixCount_t nels; // Total number of entries (nrows*ncols*nvals) - double *elements; - double matrixdata[]; -} objectmatrix; - -/** Tests whether an object is a matrix */ -#define MORPHO_ISMATRIX(val) object_istype(val, OBJECT_MATRIX) - -/** Gets the object as an matrix */ -#define MORPHO_GETMATRIX(val) ((objectmatrix *) MORPHO_GETOBJECT(val)) - -/** @brief Use to create static matrices on the C stack - @details Intended for small matrices; Caller needs to supply a double array of size nr*nc. */ -#define MORPHO_STATICMATRIX(darray, nr, nc) { .obj.type=OBJECT_MATRIX, .obj.status=OBJECT_ISUNMANAGED, .obj.next=NULL, .elements=darray, .nrows=nr, .ncols=nc, .nels=nr*nc } - -/** Macro to decide if a matrix is 'small' or 'large' and hence static or dynamic allocation should be used. */ -#define MATRIX_ISSMALL(m) (m->nrows*m->ncols -#include - -/* ------------------------------------------------------- - * objectmatrixerror type - * ------------------------------------------------------- */ - -typedef enum { - LINALGERR_OK, // Operation performed correctly - LINALGERR_INCOMPATIBLE_DIM, // Matrices have incompatible dimensions, e.g. for multiplication - LINALGERR_INDX_OUT_OF_BNDS, // Index out of bounds, e.g. for access. - LINALGERR_MATRIX_SINGULAR, // Matrix is singular - LINALGERR_NOT_SQUARE, // Matrix is required to be square for this algorithm - LINALGERR_LAPACK_INVLD_ARGS, // Invalid arguments to LAPACK routine - LINALGERR_OP_FAILED, // Matrix operation failed - LINALGERR_NOT_SUPPORTED, // Operation not supported for this matrix type - LINALGERR_NON_NUMERICAL, // Non numerical args supplied - LINALGERR_INVLD_ARG, // Invalid argument supplied - LINALGERR_ALLOC // Memory allocation failed -} linalgError_t; - -/* ------------------------------------------------------- - * Errors - * ------------------------------------------------------- */ - -#define LINALG_INCOMPATIBLEMATRICES "LnAlgMtrxIncmptbl" -#define LINALG_INCOMPATIBLEMATRICES_MSG "Matrices have incompatible shape." - -#define LINALG_INDICESOUTSIDEBOUNDS "LnAlgMtrxIndxBnds" -#define LINALG_INDICESOUTSIDEBOUNDS_MSG "Matrix index out of bounds." - -#define LINALG_SINGULAR "LnAlgMtrxSnglr" -#define LINALG_SINGULAR_MSG "Matrix is singular." - -#define LINALG_NOTSQ "LnAlgMtrxNtSq" -#define LINALG_NOTSQ_MSG "Matrix is not square." - -#define LINALG_LAPACK_ARGS "LnAlgLapackArgs" -#define LINALG_LAPACK_ARGS_MSG "Lapack function called with invalid arguments." - -#define LINALG_OPFAILED "LnAlgMtrxOpFld" -#define LINALG_OPFAILED_MSG "Matrix operation failed." - -#define LINALG_NOTSUPPORTED "LnAlgMtrxNtSpprtd" -#define LINALG_NOTSUPPORTED_MSG "Operation not supported for this matrix type." - -#define LINALG_INVLDARGS "LnAlgMtrxInvldArg" -#define LINALG_INVLDARGS_MSG "Invalid arguments to matrix method." - -#define LINALG_NNNMRCL_ARG "LnAlgMtrxNnNmrclArg" -#define LINALG_NNNMRCL_ARG_MSG "Matrix method requires numerical arguments." - -#define LINALG_NORMARGS "LnAlgMtrxNrmArgs" -#define LINALG_NORMARGS_MSG "Method 'norm' requires a supported argument: 1 or inf." - -/* ------------------------------------------------------- - * Interface - * ------------------------------------------------------- */ - -void linalg_raiseerror(vm *v, linalgError_t err); - -/** Macros to simplify error checking: - - evaluates expression f that returns linalgError_t; - - if an error occurred, raises the corresponding error in a vm called v */ -#define LINALG_ERRCHECKVM(f) { linalgError_t err = f; if (err!=LINALGERR_OK) linalg_raiseerror(v, err); } - -/** As for LINALG_ERRCHECKVM but additionally jumps to a given label */ -#define LINALG_ERRCHECKVMGOTO(f, label) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); goto label; }} - -/** As for LINALG_ERRCHECKVM but additionally returnsl */ -#define LINALG_ERRCHECKVMRETURN(f, ret) { linalgError_t err = f; if (err!=LINALGERR_OK) { linalg_raiseerror(v, err); return ret; }} - -/** Similar to the above, except returns the error rather than raising it */ -#define LINALG_ERRCHECKRETURN(f) { linalgError_t err = f; if (err!=LINALGERR_OK) return err; } - -/* ------------------------------------------------------- - * Include the rest of the library - * ------------------------------------------------------- */ - -#include "matrix.h" -#include "complexmatrix.h" - -#endif diff --git a/newlinalg/test/arithmetic/complexmatrix_acc.morpho b/newlinalg/test/arithmetic/complexmatrix_acc.morpho deleted file mode 100644 index 8213224b..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_acc.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// In-place accumulate -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+im -A[0,1]=1-im -A[1,0]=1-im -A[1,1]=1+im - -A.acc(2,A) - -print A -// expect: [ 3 + 3im 3 - 3im ] -// expect: [ 3 - 3im 3 + 3im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_add_complexmatrix.morpho b/newlinalg/test/arithmetic/complexmatrix_add_complexmatrix.morpho deleted file mode 100644 index 6417bca8..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_add_complexmatrix.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a complexmatrix to a complexmatrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) - -print A + A -// expect: [ 2 + 2im 4 + 4im ] -// expect: [ 6 + 6im 8 + 8im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho deleted file mode 100644 index b124d8b2..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_add_matrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Add a matrix to a complex matrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = Matrix(((1, 2), (3, 4))) - -print A + B -// expect: [ 2 + 1im 4 + 2im ] -// expect: [ 6 + 3im 8 + 4im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_add_nil.morpho b/newlinalg/test/arithmetic/complexmatrix_add_nil.morpho deleted file mode 100644 index b5fb8c5f..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_add_nil.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a scalar -import newlinalg - -var A = ComplexMatrix(2,2) - -print A + nil -// expect: [ 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_add_scalar.morpho b/newlinalg/test/arithmetic/complexmatrix_add_scalar.morpho deleted file mode 100644 index 99921516..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_add_scalar.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Add a scalar -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+im -A[1,1]=1+im - -print A + 2 -// expect: [ 3 + 1im 2 + 0im ] -// expect: [ 2 + 0im 3 + 1im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho deleted file mode 100644 index 15a97a62..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_addr_matrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Add a matrix to a complex matrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = Matrix(((1, 2), (3, 4))) - -print B + A -// expect: [ 2 + 1im 4 + 2im ] -// expect: [ 6 + 3im 8 + 4im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_addr_nil.morpho b/newlinalg/test/arithmetic/complexmatrix_addr_nil.morpho deleted file mode 100644 index 16c4fade..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_addr_nil.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a scalar -import newlinalg - -var A = ComplexMatrix(2,2) - -print nil + A -// expect: [ 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_div_complexmatrix.morpho b/newlinalg/test/arithmetic/complexmatrix_div_complexmatrix.morpho deleted file mode 100644 index ac0fbcfa..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_div_complexmatrix.morpho +++ /dev/null @@ -1,20 +0,0 @@ -// Divide ComplexMatrix by ComplexMatrix (solve linear system) -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1 -A[0,1]=1-im -A[1,0]=1 -A[1,1]=1+1im - -var b = ComplexMatrix(2,1) -b[0,0]=1+1im -b[1,0]=2 - -print b / A -// expect: [ 2 + 1im ] -// expect: [ -0.5 - 0.5im ] - -print b -// expect: [ 1 + 1im ] -// expect: [ 2 + 0im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho deleted file mode 100644 index eed76af3..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_div_matrix.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Divide ComplexMatrix by Matrix (solve linear system) -import newlinalg - -var A = Matrix(((1,2),(-2,1))) - -var b = ComplexMatrix((1+im, 2)) - -print b / A -// expect: [ -0.6 + 0.2im ] -// expect: [ 0.8 + 0.4im ] - -print b -// expect: [ 1 + 1im ] -// expect: [ 2 + 0im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_div_scalar.morpho b/newlinalg/test/arithmetic/complexmatrix_div_scalar.morpho deleted file mode 100644 index 8f5e2d3a..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_div_scalar.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Divide ComplexMatrix by scalar -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=2+2im -A[1,1]=4+4im - -print A / 2 -// expect: [ 1 + 1im 0 + 0im ] -// expect: [ 0 + 0im 2 + 2im ] - diff --git a/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho deleted file mode 100644 index 9e0e1e41..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_divr_matrix.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Divide Matrix by ComplexMatrix (solve linear system) -import newlinalg - -var A = ComplexMatrix(((1,2+im),(2-im,1))) - -var b = Matrix((1, 2)) - -print b / A -// expect: [ 0.75 + 0.5im ] -// expect: [ 0 - 0.25im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_mul_complex.morpho b/newlinalg/test/arithmetic/complexmatrix_mul_complex.morpho deleted file mode 100644 index 7c2d7b75..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mul_complex.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Multiply ComplexMatrix by scalar -import newlinalg - -var A = ComplexMatrix(((1,2),(3,4))) - -print A * (1+im) -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_mul_complexmatrix.morpho b/newlinalg/test/arithmetic/complexmatrix_mul_complexmatrix.morpho deleted file mode 100644 index 00f78a9f..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mul_complexmatrix.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Multiply two ComplexMatrices -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im - -var B = ComplexMatrix(2,2) -B[0,0]=1 -B[0,1]=1im -B[1,0]=-1im -B[1,1]=1 - -print A * B -// expect: [ 3 - 1im 1 + 3im ] -// expect: [ 7 - 1im 1 + 7im ] - diff --git a/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho deleted file mode 100644 index 43834769..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mul_matrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Multiply two ComplexMatrices -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) -var B = Matrix(((4,3),(2,1))) - -print A * B -// expect: [ 8 + 8im 5 + 5im ] -// expect: [ 20 + 20im 13 + 13im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_mul_scalar.morpho b/newlinalg/test/arithmetic/complexmatrix_mul_scalar.morpho deleted file mode 100644 index 66f9379a..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mul_scalar.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Multiply ComplexMatrix by scalar -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[1,1]=2+2im - -print A * 2 -// expect: [ 2 + 2im 0 + 0im ] -// expect: [ 0 + 0im 4 + 4im ] - diff --git a/newlinalg/test/arithmetic/complexmatrix_mulr_complex.xmorpho b/newlinalg/test/arithmetic/complexmatrix_mulr_complex.xmorpho deleted file mode 100644 index ab5cf79d..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mulr_complex.xmorpho +++ /dev/null @@ -1,8 +0,0 @@ -// Multiply ComplexMatrix by scalar -import newlinalg - -var A = ComplexMatrix(((1,2),(3,4))) - -print (1+im) * A -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho deleted file mode 100644 index f9551c2f..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_mulr_matrix.morpho +++ /dev/null @@ -1,15 +0,0 @@ -// Multiply two ComplexMatrices -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im),(3+3im,4+4im))) -var B = Matrix(((4,3),(2,1))) - -print B * A -// expect: [ 13 + 13im 20 + 20im ] -// expect: [ 5 + 5im 8 + 8im ] - -var C = ComplexMatrix([[1+1im],[3+3im]]) - -print B * C -// expect: [ 13 + 13im ] -// expect: [ 5 + 5im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_sub_complexmatrix.morpho b/newlinalg/test/arithmetic/complexmatrix_sub_complexmatrix.morpho deleted file mode 100644 index c6bb639d..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_sub_complexmatrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Subtract a complexmatrix from a complexmatrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = ComplexMatrix(((4+4im, 3+3im), (2+2im, 1+1im))) - -print A - B -// expect: [ -3 - 3im -1 - 1im ] -// expect: [ 1 + 1im 3 + 3im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho deleted file mode 100644 index 5e14f01c..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_sub_matrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Subtract a matrix from a complexmatrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = Matrix(((4, 3), (2, 1))) - -print A - B -// expect: [ -3 + 1im -1 + 2im ] -// expect: [ 1 + 3im 3 + 4im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_sub_scalar.morpho b/newlinalg/test/arithmetic/complexmatrix_sub_scalar.morpho deleted file mode 100644 index fed8777b..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_sub_scalar.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Subtract a scalar -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=2+2im -A[1,1]=2+2im - -print A - 2 -// expect: [ 0 + 2im -2 + 0im ] -// expect: [ -2 + 0im 0 + 2im ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho b/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho deleted file mode 100644 index ff6d357b..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_subr_matrix.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Subtract a matrix from a complexmatrix -import newlinalg - -var A = ComplexMatrix(((1+1im, 2+2im), (3+3im, 4+4im))) -var B = Matrix(((4, 3), (2, 1))) - -print B - A -// expect: [ 3 - 1im 1 - 2im ] -// expect: [ -1 - 3im -3 - 4im ] diff --git a/newlinalg/test/arithmetic/complexmatrix_subr_scalar.morpho b/newlinalg/test/arithmetic/complexmatrix_subr_scalar.morpho deleted file mode 100644 index 547e355c..00000000 --- a/newlinalg/test/arithmetic/complexmatrix_subr_scalar.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Subtract a scalar -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+im -A[1,1]=1+im - -print 2 - A -// expect: [ 1 - 1im 2 + 0im ] -// expect: [ 2 + 0im 1 - 1im ] diff --git a/newlinalg/test/arithmetic/matrix_acc.morpho b/newlinalg/test/arithmetic/matrix_acc.morpho deleted file mode 100644 index 2a6a22ba..00000000 --- a/newlinalg/test/arithmetic/matrix_acc.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// In-place accumulate -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=1 -A[1,0]=1 -A[1,1]=1 - -A.acc(2,A) - -print A -// expect: [ 3 3 ] -// expect: [ 3 3 ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/matrix_add_matrix.morpho b/newlinalg/test/arithmetic/matrix_add_matrix.morpho deleted file mode 100644 index 7c71df78..00000000 --- a/newlinalg/test/arithmetic/matrix_add_matrix.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Matrix arithmetic - -import newlinalg - -var a = Matrix([[1, 2], [3, 4]]) -var b = Matrix([[0, 1], [1, 0]]) - -print "A+B:" -print a+b -// expect: A+B: -// expect: [ 1 3 ] -// expect: [ 4 4 ] diff --git a/newlinalg/test/arithmetic/matrix_add_nil.morpho b/newlinalg/test/arithmetic/matrix_add_nil.morpho deleted file mode 100644 index 2f3b764e..00000000 --- a/newlinalg/test/arithmetic/matrix_add_nil.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a scalar -import newlinalg - -var A = Matrix(2,2) - -print A + nil -// expect: [ 0 0 ] -// expect: [ 0 0 ] diff --git a/newlinalg/test/arithmetic/matrix_add_scalar.morpho b/newlinalg/test/arithmetic/matrix_add_scalar.morpho deleted file mode 100644 index a7c81110..00000000 --- a/newlinalg/test/arithmetic/matrix_add_scalar.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a scalar -import newlinalg - -var A = Matrix(2,2) - -print A + 2 -// expect: [ 2 2 ] -// expect: [ 2 2 ] diff --git a/newlinalg/test/arithmetic/matrix_addr_nil.morpho b/newlinalg/test/arithmetic/matrix_addr_nil.morpho deleted file mode 100644 index c3334e60..00000000 --- a/newlinalg/test/arithmetic/matrix_addr_nil.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Add nil from the right -import newlinalg - -var A = Matrix(2,2) -A += 1 - -print nil + A -// expect: [ 1 1 ] -// expect: [ 1 1 ] diff --git a/newlinalg/test/arithmetic/matrix_addr_scalar.morpho b/newlinalg/test/arithmetic/matrix_addr_scalar.morpho deleted file mode 100644 index 93e72152..00000000 --- a/newlinalg/test/arithmetic/matrix_addr_scalar.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Add a scalar from the right -import newlinalg - -var A = Matrix(2,2) - -print 2 + A -// expect: [ 2 2 ] -// expect: [ 2 2 ] diff --git a/newlinalg/test/arithmetic/matrix_div_matrix.morpho b/newlinalg/test/arithmetic/matrix_div_matrix.morpho deleted file mode 100644 index 866d9530..00000000 --- a/newlinalg/test/arithmetic/matrix_div_matrix.morpho +++ /dev/null @@ -1,17 +0,0 @@ -// Divide Matrix by Matrix (solve linear system) -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -var b = Matrix(2,1) -b[0]=1 -b[1]=2 - -print b / A -// expect: [ 0 ] -// expect: [ 0.5 ] - diff --git a/newlinalg/test/arithmetic/matrix_div_scalar.morpho b/newlinalg/test/arithmetic/matrix_div_scalar.morpho deleted file mode 100644 index 4fb79d92..00000000 --- a/newlinalg/test/arithmetic/matrix_div_scalar.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Divide Matrix by scalar -import newlinalg - -var A = Matrix(2,2) -A[0,0]=2 -A[1,1]=4 - -print A / 2 -// expect: [ 1 0 ] -// expect: [ 0 2 ] - diff --git a/newlinalg/test/arithmetic/matrix_mul_matrix.morpho b/newlinalg/test/arithmetic/matrix_mul_matrix.morpho deleted file mode 100644 index 79840303..00000000 --- a/newlinalg/test/arithmetic/matrix_mul_matrix.morpho +++ /dev/null @@ -1,36 +0,0 @@ -// Multiply two Matrices -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -var B = Matrix(2,2) -B[0,0]=1 -B[0,1]=0 -B[1,0]=0 -B[1,1]=1 - -print A * B -// expect: [ 1 2 ] -// expect: [ 3 4 ] - -var a = Matrix([[1, 2], [3, 4]]) -var b = Matrix([[0, 1], [1, 0]]) - -print "A*B:" -print a*b -// expect: A*B: -// expect: [ 2 1 ] -// expect: [ 4 3 ] - -var c = Matrix([[1,2,3], [4,5,6]]) -var d = Matrix([[1,2], [3,4], [5,6]]) - -print "C*D:" -print c*d -// expect: C*D: -// expect: [ 22 28 ] -// expect: [ 49 64 ] \ No newline at end of file diff --git a/newlinalg/test/arithmetic/matrix_mul_scalar.morpho b/newlinalg/test/arithmetic/matrix_mul_scalar.morpho deleted file mode 100644 index f88ff97b..00000000 --- a/newlinalg/test/arithmetic/matrix_mul_scalar.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Multiply Matrix by scalar -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[1,1]=2 - -print A * 2 -// expect: [ 2 0 ] -// expect: [ 0 4 ] - diff --git a/newlinalg/test/arithmetic/matrix_negate.morpho b/newlinalg/test/arithmetic/matrix_negate.morpho deleted file mode 100644 index 0613e11d..00000000 --- a/newlinalg/test/arithmetic/matrix_negate.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Negate - -import newlinalg - -var a = Matrix([[1,2], [3,4]]) - -print -a -// expect: [ -1 -2 ] -// expect: [ -3 -4 ] diff --git a/newlinalg/test/arithmetic/matrix_sub_matrix.morpho b/newlinalg/test/arithmetic/matrix_sub_matrix.morpho deleted file mode 100644 index dd36ad58..00000000 --- a/newlinalg/test/arithmetic/matrix_sub_matrix.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Matrix arithmetic - -import newlinalg - -var a = Matrix([[1, 2], [3, 4]]) -var b = Matrix([[0, 1], [1, 0]]) - - -print "A-B:" -print a-b -// expect: A-B: -// expect: [ 1 1 ] -// expect: [ 2 4 ] - diff --git a/newlinalg/test/arithmetic/matrix_sub_scalar.morpho b/newlinalg/test/arithmetic/matrix_sub_scalar.morpho deleted file mode 100644 index 9f0e26c5..00000000 --- a/newlinalg/test/arithmetic/matrix_sub_scalar.morpho +++ /dev/null @@ -1,8 +0,0 @@ -// Subtract a scalar -import newlinalg - -var A = Matrix(2,2) - -print A - 2 -// expect: [ -2 -2 ] -// expect: [ -2 -2 ] diff --git a/newlinalg/test/arithmetic/matrix_subr_scalar.morpho b/newlinalg/test/arithmetic/matrix_subr_scalar.morpho deleted file mode 100644 index aab246de..00000000 --- a/newlinalg/test/arithmetic/matrix_subr_scalar.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Subtract a scalar -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[1,1]=1 - -print 2 - A -// expect: [ 1 2 ] -// expect: [ 2 1 ] diff --git a/newlinalg/test/assign/complexmatrix_assign.morpho b/newlinalg/test/assign/complexmatrix_assign.morpho deleted file mode 100644 index d55502db..00000000 --- a/newlinalg/test/assign/complexmatrix_assign.morpho +++ /dev/null @@ -1,17 +0,0 @@ -// Assign one ComplexMatrix to another - -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0] = 1+1im -A[0,1] = 2+2im -A[1,0] = 3+3im -A[1,1] = 4+4im - -var B = ComplexMatrix(2,2) - -B.assign(A) - -print B -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] diff --git a/newlinalg/test/assign/complexmatrix_clone.morpho b/newlinalg/test/assign/complexmatrix_clone.morpho deleted file mode 100644 index 3e1a2b61..00000000 --- a/newlinalg/test/assign/complexmatrix_clone.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Clone a ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im - -var B = A.clone() - -// Modify original -A[0,0]=9+9im - -// Clone should be unchanged -print B -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] - diff --git a/newlinalg/test/assign/matrix_assign.morpho b/newlinalg/test/assign/matrix_assign.morpho deleted file mode 100644 index 1d341bc6..00000000 --- a/newlinalg/test/assign/matrix_assign.morpho +++ /dev/null @@ -1,20 +0,0 @@ -// Assign one matrix to another - -import newlinalg - -var A = Matrix(2,2) -A[0,0] = 1 -A[0,1] = 2 -A[1,0] = 3 -A[1,1] = 4 - -var B = Matrix(2,2) -B.assign(A) - -print B -// expect: [ 1 2 ] -// expect: [ 3 4 ] - -var C = Matrix(1,2) -B.assign(C) -// expect error 'LnAlgMtrxIncmptbl' diff --git a/newlinalg/test/constructors/complexmatrix_array_constructor.morpho b/newlinalg/test/constructors/complexmatrix_array_constructor.morpho deleted file mode 100644 index 68f67b94..00000000 --- a/newlinalg/test/constructors/complexmatrix_array_constructor.morpho +++ /dev/null @@ -1,15 +0,0 @@ -// Create a Matrix from an Array - -import newlinalg - -var a[2,2] -a[0,0]=1+im -a[1,0]=2-2im -a[0,1]=3+3im -a[1,1]=4+4im - -var A = ComplexMatrix(a) - -print A -// expect: [ 1 + 1im 3 + 3im ] -// expect: [ 2 - 2im 4 + 4im ] diff --git a/newlinalg/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho b/newlinalg/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho deleted file mode 100644 index f45fe032..00000000 --- a/newlinalg/test/constructors/complexmatrix_array_constructor_invalid_dimensions.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// ComplexMatrix constructor from Array with invalid dimensions -import newlinalg - -// Try to construct from a 1D array (should fail - requires 2D) -var a[4] -a[0] = 1 -a[1] = 2 -a[2] = 3 -a[3] = 4 - -print ComplexMatrix(a) -// expect error 'LnAlgMtrxInvldArg' diff --git a/newlinalg/test/constructors/complexmatrix_constructor.morpho b/newlinalg/test/constructors/complexmatrix_constructor.morpho deleted file mode 100644 index daf69f52..00000000 --- a/newlinalg/test/constructors/complexmatrix_constructor.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Create a ComplexMatrix - -import newlinalg - -var A = ComplexMatrix(2,2) - -print A -// expect: [ 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im ] - diff --git a/newlinalg/test/constructors/complexmatrix_constructor_edge_cases.morpho b/newlinalg/test/constructors/complexmatrix_constructor_edge_cases.morpho deleted file mode 100644 index eae633aa..00000000 --- a/newlinalg/test/constructors/complexmatrix_constructor_edge_cases.morpho +++ /dev/null @@ -1,48 +0,0 @@ -// ComplexMatrix constructor edge cases -import newlinalg - -// Zero dimension matrix (0x0) -var A = ComplexMatrix(0, 0) -print A.dimensions() -// expect: (0, 0) -print A.count() -// expect: 0 - -// Zero rows, non-zero columns -var B = ComplexMatrix(0, 3) -print B.dimensions() -// expect: (0, 3) -print B.count() -// expect: 0 - -// Non-zero rows, zero columns -var C = ComplexMatrix(3, 0) -print C.dimensions() -// expect: (3, 0) -print C.count() -// expect: 0 - -// Single element matrix (1x1) -var D = ComplexMatrix(1, 1) -D[0,0] = 42+10im -print D -// expect: [ 42 + 10im ] - -// Single row matrix (1xN) -var E = ComplexMatrix(1, 3) -E[0,0] = 1+im -E[0,1] = 2+2im -E[0,2] = 3+3im -print E -// expect: [ 1 + 1im 2 + 2im 3 + 3im ] - -// Single column matrix (Nx1) -var F = ComplexMatrix(3, 1) -F[0,0] = 1+im -F[1,0] = 2+2im -F[2,0] = 3+3im -print F -// expect: [ 1 + 1im ] -// expect: [ 2 + 2im ] -// expect: [ 3 + 3im ] - diff --git a/newlinalg/test/constructors/complexmatrix_constructor_invalid_args.morpho b/newlinalg/test/constructors/complexmatrix_constructor_invalid_args.morpho deleted file mode 100644 index e95d5e16..00000000 --- a/newlinalg/test/constructors/complexmatrix_constructor_invalid_args.morpho +++ /dev/null @@ -1,6 +0,0 @@ -// ComplexMatrix constructor with invalid arguments -import newlinalg - -// Try to construct with invalid argument types -print ComplexMatrix("invalid") -// expect error 'MltplDsptchFld' diff --git a/newlinalg/test/constructors/complexmatrix_list_constructor.morpho b/newlinalg/test/constructors/complexmatrix_list_constructor.morpho deleted file mode 100644 index 8f39b5f0..00000000 --- a/newlinalg/test/constructors/complexmatrix_list_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a ComplexMatrix from a List of Lists - -import newlinalg - -var A = ComplexMatrix([[1+im,2-2im],[3+3im,4-4im]]) - -print A -// expect: [ 1 + 1im 2 - 2im ] -// expect: [ 3 + 3im 4 - 4im ] \ No newline at end of file diff --git a/newlinalg/test/constructors/complexmatrix_list_vector_constructor.morpho b/newlinalg/test/constructors/complexmatrix_list_vector_constructor.morpho deleted file mode 100644 index 3915d5be..00000000 --- a/newlinalg/test/constructors/complexmatrix_list_vector_constructor.morpho +++ /dev/null @@ -1,18 +0,0 @@ -// Create a ComplexMatrix from a List of Values - -import newlinalg - -var A = ComplexMatrix([1+im, 2-2im, 3+3im, 4-4im]) - -print A -// expect: [ 1 + 1im ] -// expect: [ 2 - 2im ] -// expect: [ 3 + 3im ] -// expect: [ 4 - 4im ] - -var B = ComplexMatrix(((1+im), (2), (3), (4-4im))) -print B -// expect: [ 1 + 1im ] -// expect: [ 2 + 0im ] -// expect: [ 3 + 0im ] -// expect: [ 4 - 4im ] diff --git a/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho b/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho deleted file mode 100644 index 9c94d9a6..00000000 --- a/newlinalg/test/constructors/complexmatrix_matrix_constructor.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Create a Matrix from an Array - -import newlinalg - -var A = Matrix(((1,2), (3,4))) - -var B = ComplexMatrix(A) - -print B -// expect: [ 1 + 0im 2 + 0im ] -// expect: [ 3 + 0im 4 + 0im ] diff --git a/newlinalg/test/constructors/complexmatrix_tuple_column_constructor.morpho b/newlinalg/test/constructors/complexmatrix_tuple_column_constructor.morpho deleted file mode 100644 index ac714044..00000000 --- a/newlinalg/test/constructors/complexmatrix_tuple_column_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a column vector from a list of tuples - -import newlinalg - -var C = ComplexMatrix(((1+1im),(3+3im))) - -print C -// expect: [ 1 + 1im ] -// expect: [ 3 + 3im ] diff --git a/newlinalg/test/constructors/complexmatrix_tuple_constructor.morpho b/newlinalg/test/constructors/complexmatrix_tuple_constructor.morpho deleted file mode 100644 index fb895cd8..00000000 --- a/newlinalg/test/constructors/complexmatrix_tuple_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a ComplexMatrix from a List of Lists - -import newlinalg - -var A = ComplexMatrix(((1+im,2-2im),(3+3im,4-4im))) - -print A -// expect: [ 1 + 1im 2 - 2im ] -// expect: [ 3 + 3im 4 - 4im ] \ No newline at end of file diff --git a/newlinalg/test/constructors/complexmatrix_vector_constructor.morpho b/newlinalg/test/constructors/complexmatrix_vector_constructor.morpho deleted file mode 100644 index 55e32e48..00000000 --- a/newlinalg/test/constructors/complexmatrix_vector_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a ComplexMatrix column vector - -import newlinalg - -var A = ComplexMatrix(2) - -print A -// expect: [ 0 + 0im ] -// expect: [ 0 + 0im ] diff --git a/newlinalg/test/constructors/matrix_array_constructor.morpho b/newlinalg/test/constructors/matrix_array_constructor.morpho deleted file mode 100644 index 0658a8f0..00000000 --- a/newlinalg/test/constructors/matrix_array_constructor.morpho +++ /dev/null @@ -1,16 +0,0 @@ -// Create a Matrix from an Array - -import newlinalg - -var a[2,2] -a[0,0]=1 -a[1,0]=3 -a[0,1]=2 -a[1,1]=4 - -var A = Matrix(a) - -print A -// expect: [ 1 2 ] -// expect: [ 3 4 ] - diff --git a/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho b/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho deleted file mode 100644 index 3c98c0b1..00000000 --- a/newlinalg/test/constructors/matrix_array_constructor_invalid_dimensions.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Matrix constructor from Array with invalid dimensions -import newlinalg - -// Try to construct from a 1D array (should fail - requires 2D) -var a[4] -a[0] = 1 -a[1] = 2 -a[2] = 3 -a[3] = 4 - -print Matrix(a) -// expect error 'LnAlgMtrxInvldArg' diff --git a/newlinalg/test/constructors/matrix_constructor.morpho b/newlinalg/test/constructors/matrix_constructor.morpho deleted file mode 100644 index c4b72114..00000000 --- a/newlinalg/test/constructors/matrix_constructor.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Create a Matrix - -import newlinalg - -var A = Matrix(2,2) - -print A -// expect: [ 0 0 ] -// expect: [ 0 0 ] - diff --git a/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho b/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho deleted file mode 100644 index 6d5954c6..00000000 --- a/newlinalg/test/constructors/matrix_constructor_edge_cases.morpho +++ /dev/null @@ -1,48 +0,0 @@ -// Matrix constructor edge cases -import newlinalg - -// Zero dimension matrix (0x0) -var A = Matrix(0, 0) -print A.dimensions() -// expect: (0, 0) -print A.count() -// expect: 0 - -// Zero rows, non-zero columns -var B = Matrix(0, 3) -print B.dimensions() -// expect: (0, 3) -print B.count() -// expect: 0 - -// Non-zero rows, zero columns -var C = Matrix(3, 0) -print C.dimensions() -// expect: (3, 0) -print C.count() -// expect: 0 - -// Single element matrix (1x1) -var D = Matrix(1, 1) -D[0,0] = 42 -print D -// expect: [ 42 ] - -// Single row matrix (1xN) -var E = Matrix(1, 3) -E[0,0] = 1 -E[0,1] = 2 -E[0,2] = 3 -print E -// expect: [ 1 2 3 ] - -// Single column matrix (Nx1) -var F = Matrix(3, 1) -F[0,0] = 1 -F[1,0] = 2 -F[2,0] = 3 -print F -// expect: [ 1 ] -// expect: [ 2 ] -// expect: [ 3 ] - diff --git a/newlinalg/test/constructors/matrix_identity_constructor.morpho b/newlinalg/test/constructors/matrix_identity_constructor.morpho deleted file mode 100644 index 2d850ac4..00000000 --- a/newlinalg/test/constructors/matrix_identity_constructor.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// IdentityMatrix constructor -import newlinalg - -var I = IdentityMatrix(3) - -print I -// expect: [ 1 0 0 ] -// expect: [ 0 1 0 ] -// expect: [ 0 0 1 ] - -var I2 = IdentityMatrix(1) -print I2 -// expect: [ 1 ] diff --git a/newlinalg/test/constructors/matrix_list_constructor.morpho b/newlinalg/test/constructors/matrix_list_constructor.morpho deleted file mode 100644 index 15e23882..00000000 --- a/newlinalg/test/constructors/matrix_list_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a Matrix from a List of Lists - -import newlinalg - -var A = Matrix([[1,2],[3,4]]) - -print A -// expect: [ 1 2 ] -// expect: [ 3 4 ] diff --git a/newlinalg/test/constructors/matrix_list_vector_constructor.morpho b/newlinalg/test/constructors/matrix_list_vector_constructor.morpho deleted file mode 100644 index 8790fd03..00000000 --- a/newlinalg/test/constructors/matrix_list_vector_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a column vector from a list of tuples - -import newlinalg - -var C = Matrix(((1),(2))) - -print C -// expect: [ 1 ] -// expect: [ 2 ] diff --git a/newlinalg/test/constructors/matrix_tuple_constructor.morpho b/newlinalg/test/constructors/matrix_tuple_constructor.morpho deleted file mode 100644 index 7d400bdd..00000000 --- a/newlinalg/test/constructors/matrix_tuple_constructor.morpho +++ /dev/null @@ -1,16 +0,0 @@ -// Create a Matrix from a Tuple of Tuples - -import newlinalg - -var A = Matrix(((1,2),(3,4))) - -print A -// expect: [ 1 2 ] -// expect: [ 3 4 ] - -// Mix Tuples and Lists -var B = Matrix(([1,2],[3,4])) - -print B -// expect: [ 1 2 ] -// expect: [ 3 4 ] diff --git a/newlinalg/test/constructors/matrix_vector_constructor.morpho b/newlinalg/test/constructors/matrix_vector_constructor.morpho deleted file mode 100644 index bf2e0b35..00000000 --- a/newlinalg/test/constructors/matrix_vector_constructor.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Create a Matrix - -import newlinalg - -var A = Matrix(2) - -print A -// expect: [ 0 ] -// expect: [ 0 ] diff --git a/newlinalg/test/constructors/vector_constructor.morpho b/newlinalg/test/constructors/vector_constructor.morpho deleted file mode 100644 index 3a508fb9..00000000 --- a/newlinalg/test/constructors/vector_constructor.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Create a column vector - -import newlinalg - -var A = Matrix(2) - -print A -// expect: [ 0 ] -// expect: [ 0 ] - diff --git a/newlinalg/test/errors/complexmatrix_incompatible_dimensions.morpho b/newlinalg/test/errors/complexmatrix_incompatible_dimensions.morpho deleted file mode 100644 index f9f59eef..00000000 --- a/newlinalg/test/errors/complexmatrix_incompatible_dimensions.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Incompatible dimensions error -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im - -var B = ComplexMatrix(3,3) -B[0,0]=1+1im - -// Try to add incompatible matrices -print A + B -// expect error 'LnAlgMtrxIncmptbl' - diff --git a/newlinalg/test/errors/complexmatrix_index_out_of_bounds.morpho b/newlinalg/test/errors/complexmatrix_index_out_of_bounds.morpho deleted file mode 100644 index 6b09281d..00000000 --- a/newlinalg/test/errors/complexmatrix_index_out_of_bounds.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Index out of bounds error -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im - -// Try to access out of bounds -print A[5,5] -// expect error 'LnAlgMtrxIndxBnds' - diff --git a/newlinalg/test/errors/complexmatrix_non_square_error.morpho b/newlinalg/test/errors/complexmatrix_non_square_error.morpho deleted file mode 100644 index 37fe8049..00000000 --- a/newlinalg/test/errors/complexmatrix_non_square_error.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Non-square matrix err. (for operations requiring square matrices) -import newlinalg - -var A = ComplexMatrix(2,3) -A[0,0]=1+1im - -// Try trace on non-square matrix -print A.trace() -// expect error 'LnAlgMtrxNtSq' - diff --git a/newlinalg/test/index/complexmatrix_getcolumn.morpho b/newlinalg/test/index/complexmatrix_getcolumn.morpho deleted file mode 100644 index ee1b4b37..00000000 --- a/newlinalg/test/index/complexmatrix_getcolumn.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Get columns of a ComplexMatrix - -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0] = 1+1im -A[0,1] = 2+2im -A[1,0] = 3+3im -A[1,1] = 4+4im - -print A.column(0) -// expect: [ 1 + 1im ] -// expect: [ 3 + 3im ] - -print A.column(1) -// expect: [ 2 + 2im ] -// expect: [ 4 + 4im ] - -print A.column(2) // expect error 'LnAlgMtrxIndxBnds' diff --git a/newlinalg/test/index/complexmatrix_getindex.morpho b/newlinalg/test/index/complexmatrix_getindex.morpho deleted file mode 100644 index 344d5e6d..00000000 --- a/newlinalg/test/index/complexmatrix_getindex.morpho +++ /dev/null @@ -1,21 +0,0 @@ -// Get elements of a ComplexMatrix - -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0] = 1+1im -A[1,0] = 2+2im -A[0,1] = 3+3im -A[1,1] = 4+4im - -// Array-like access -print A[0,0] // expect: 1 + 1im -print A[1,0] // expect: 2 + 2im -print A[0,1] // expect: 3 + 3im -print A[1,1] // expect: 4 + 4im - -// Vector-like access -print A[0] // expect: 1 + 1im -print A[1] // expect: 2 + 2im -print A[2] // expect: 3 + 3im -print A[3] // expect: 4 + 4im diff --git a/newlinalg/test/index/complexmatrix_setcolumn.morpho b/newlinalg/test/index/complexmatrix_setcolumn.morpho deleted file mode 100644 index 3e7e5e78..00000000 --- a/newlinalg/test/index/complexmatrix_setcolumn.morpho +++ /dev/null @@ -1,22 +0,0 @@ -// Set columns of a Matrix - -import newlinalg - -var A = ComplexMatrix(2,2) - -var b = ComplexMatrix(2,1) -b[0] = 1+1im -b[1] = 3+3im - -var c = ComplexMatrix(2,1) -c[0] = 2+2im -c[1] = 4+4im - -A.setColumn(0,b) -A.setColumn(1,c) - -print A -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] - -print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' diff --git a/newlinalg/test/index/complexmatrix_setindex.morpho b/newlinalg/test/index/complexmatrix_setindex.morpho deleted file mode 100644 index ad73e4bf..00000000 --- a/newlinalg/test/index/complexmatrix_setindex.morpho +++ /dev/null @@ -1,21 +0,0 @@ -// Set elements of a ComplexMatrix - -import newlinalg - -var A = ComplexMatrix(2,2) - -// Set using two indices -A[0,0] = 1+1im -A[0,1] = 2+2im -A[1,0] = 3+3im -A[1,1] = 4+4im - -print A -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im ] - -// Set using single index (vector-like) -A[0] = 5+5im -print A[0,0] -// expect: 5 + 5im - diff --git a/newlinalg/test/index/complexmatrix_setindex_real.morpho b/newlinalg/test/index/complexmatrix_setindex_real.morpho deleted file mode 100644 index d6ed6f9e..00000000 --- a/newlinalg/test/index/complexmatrix_setindex_real.morpho +++ /dev/null @@ -1,16 +0,0 @@ -// Set elements of a ComplexMatrix with mixture of Complex and Real args - -import newlinalg - -var A = ComplexMatrix(2,2) - -// Set using two indices -A[0,0] = 1+im // Make sure imag part is zero'd out -A[0,0] = 1 -A[0,1] = 2+2im -A[1,0] = 3.0 -A[1,1] = 4+4im - -print A -// expect: [ 1 + 0im 2 + 2im ] -// expect: [ 3 + 0im 4 + 4im ] diff --git a/newlinalg/test/index/complexmatrix_setslice.morpho b/newlinalg/test/index/complexmatrix_setslice.morpho deleted file mode 100644 index 57f187ea..00000000 --- a/newlinalg/test/index/complexmatrix_setslice.morpho +++ /dev/null @@ -1,50 +0,0 @@ -// Copy elements of a ComplexMatrix using slices -import newlinalg - -var A = ComplexMatrix(((1+1im,2+2im),(3+3im,4+4im))) - -var B = ComplexMatrix(4,4) - -B[0..1, 0..1] = A -print B -// expect: [ 1 + 1im 2 + 2im 0 + 0im 0 + 0im ] -// expect: [ 3 + 3im 4 + 4im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] - -var C = ComplexMatrix(4,4) -C[0..2:2, 0..2:2] = A -print C -// expect: [ 1 + 1im 0 + 0im 2 + 2im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 3 + 3im 0 + 0im 4 + 4im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] - -var D = ComplexMatrix(4,4) -D[1..2, 1..2] = A -print D -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 1 + 1im 2 + 2im 0 + 0im ] -// expect: [ 0 + 0im 3 + 3im 4 + 4im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] - -var E = ComplexMatrix(4,4) -E[1..3:2, 1..3:2] = A -print E -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 1 + 1im 0 + 0im 2 + 2im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 3 + 3im 0 + 0im 4 + 4im ] - -var F = ComplexMatrix(4,4) -F[0..1, 0] = A[0..1, 1] -print F -// expect: [ 2 + 2im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 4 + 4im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] -// expect: [ 0 + 0im 0 + 0im 0 + 0im 0 + 0im ] - -B[0..5, 0..5] = A -print B -// expect error 'LnAlgMtrxIndxBnds' - diff --git a/newlinalg/test/index/complexmatrix_slice.morpho b/newlinalg/test/index/complexmatrix_slice.morpho deleted file mode 100644 index 0690a8e1..00000000 --- a/newlinalg/test/index/complexmatrix_slice.morpho +++ /dev/null @@ -1,25 +0,0 @@ -// Slice a ComplexMatrix -import newlinalg - -var A = ComplexMatrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16)))*(1+1im) - -print A[0..1, 0..1] -// expect: [ 1 + 1im 2 + 2im ] -// expect: [ 5 + 5im 6 + 6im ] - -print A[0..2, 0] -// expect: [ 1 + 1im ] -// expect: [ 5 + 5im ] -// expect: [ 9 + 9im ] - -print A[2..0:-1, 0] -// expect: [ 9 + 9im ] -// expect: [ 5 + 5im ] -// expect: [ 1 + 1im ] - -print A[0..3:2, 0..3:2] -// expect: [ 1 + 1im 3 + 3im ] -// expect: [ 9 + 9im 11 + 11im ] - -print A[0..1:2, "Foo"] -// expect error 'LnAlgMtrxNnNmrclArg' diff --git a/newlinalg/test/index/matrix_getcolumn.morpho b/newlinalg/test/index/matrix_getcolumn.morpho deleted file mode 100644 index 59e613ae..00000000 --- a/newlinalg/test/index/matrix_getcolumn.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Get columns of a Matrix - -import newlinalg - -var A = Matrix(2,2) -A[0,0] = 1 -A[0,1] = 2 -A[1,0] = 3 -A[1,1] = 4 - -print A.column(0) -// expect: [ 1 ] -// expect: [ 3 ] - -print A.column(1) -// expect: [ 2 ] -// expect: [ 4 ] - -print A.column(2) // expect error 'LnAlgMtrxIndxBnds' \ No newline at end of file diff --git a/newlinalg/test/index/matrix_getindex.morpho b/newlinalg/test/index/matrix_getindex.morpho deleted file mode 100644 index f49b9570..00000000 --- a/newlinalg/test/index/matrix_getindex.morpho +++ /dev/null @@ -1,21 +0,0 @@ -// Get elements of a Matrix - -import newlinalg - -var A = Matrix(2,2) -A[0,0] = 1 -A[1,0] = 2 -A[0,1] = 3 -A[1,1] = 4 - -// Array-like access -print A[0,0] // expect: 1 -print A[1,0] // expect: 2 -print A[0,1] // expect: 3 -print A[1,1] // expect: 4 - -// Vector-like access -print A[0] // expect: 1 -print A[1] // expect: 2 -print A[2] // expect: 3 -print A[3] // expect: 4 \ No newline at end of file diff --git a/newlinalg/test/index/matrix_setcolumn.morpho b/newlinalg/test/index/matrix_setcolumn.morpho deleted file mode 100644 index 38e505ec..00000000 --- a/newlinalg/test/index/matrix_setcolumn.morpho +++ /dev/null @@ -1,22 +0,0 @@ -// Set columns of a Matrix - -import newlinalg - -var A = Matrix(2,2) - -var b = Matrix(2,1) -b[0] = 1 -b[1] = 3 - -var c = Matrix(2,1) -c[0] = 2 -c[1] = 4 - -A.setColumn(0,b) -A.setColumn(1,c) - -print A -// expect: [ 1 2 ] -// expect: [ 3 4 ] - -print A.setColumn(2,b) // expect error 'LnAlgMtrxIndxBnds' diff --git a/newlinalg/test/index/matrix_setindex.morpho b/newlinalg/test/index/matrix_setindex.morpho deleted file mode 100644 index abe9f6ca..00000000 --- a/newlinalg/test/index/matrix_setindex.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Set elements of a Matrix - -import newlinalg - -var A = Matrix(2,2) -A[0,0] = 1 -A[0,1] = 2 -A[1,0] = 3 -A[1,1] = 4 - -print A -// expect: [ 1 2 ] -// expect: [ 3 4 ] diff --git a/newlinalg/test/index/matrix_setslice.morpho b/newlinalg/test/index/matrix_setslice.morpho deleted file mode 100644 index 41280a84..00000000 --- a/newlinalg/test/index/matrix_setslice.morpho +++ /dev/null @@ -1,49 +0,0 @@ -// Copy elements of a Matrix using slices -import newlinalg - -var A = Matrix(((1,2),(3,4))) - -var B = Matrix(4,4) - -B[0..1, 0..1] = A -print B -// expect: [ 1 2 0 0 ] -// expect: [ 3 4 0 0 ] -// expect: [ 0 0 0 0 ] -// expect: [ 0 0 0 0 ] - -var C = Matrix(4,4) -C[0..2:2, 0..2:2] = A -print C -// expect: [ 1 0 2 0 ] -// expect: [ 0 0 0 0 ] -// expect: [ 3 0 4 0 ] -// expect: [ 0 0 0 0 ] - -var D = Matrix(4,4) -D[1..2, 1..2] = A -print D -// expect: [ 0 0 0 0 ] -// expect: [ 0 1 2 0 ] -// expect: [ 0 3 4 0 ] -// expect: [ 0 0 0 0 ] - -var E = Matrix(4,4) -E[1..3:2, 1..3:2] = A -print E -// expect: [ 0 0 0 0 ] -// expect: [ 0 1 0 2 ] -// expect: [ 0 0 0 0 ] -// expect: [ 0 3 0 4 ] - -var F = Matrix(4,4) -F[0..1, 0] = A[0..1, 1] -print F -// expect: [ 2 0 0 0 ] -// expect: [ 4 0 0 0 ] -// expect: [ 0 0 0 0 ] -// expect: [ 0 0 0 0 ] - -B[0..5, 0..5] = A -print B -// expect error 'LnAlgMtrxIndxBnds' \ No newline at end of file diff --git a/newlinalg/test/index/matrix_slice.morpho b/newlinalg/test/index/matrix_slice.morpho deleted file mode 100644 index 5f362fa0..00000000 --- a/newlinalg/test/index/matrix_slice.morpho +++ /dev/null @@ -1,25 +0,0 @@ -// Slice a Matrix -import newlinalg - -var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) - -print A[0..1, 0..1] -// expect: [ 1 2 ] -// expect: [ 5 6 ] - -print A[0..2, 0] -// expect: [ 1 ] -// expect: [ 5 ] -// expect: [ 9 ] - -print A[2..0:-1, 0] -// expect: [ 9 ] -// expect: [ 5 ] -// expect: [ 1 ] - -print A[0..3:2, 0..3:2] -// expect: [ 1 3 ] -// expect: [ 9 11 ] - -print A[0..1:2, "Foo"] -// expect error 'LnAlgMtrxNnNmrclArg' diff --git a/newlinalg/test/index/matrix_slice_bounds.morpho b/newlinalg/test/index/matrix_slice_bounds.morpho deleted file mode 100644 index 819cef42..00000000 --- a/newlinalg/test/index/matrix_slice_bounds.morpho +++ /dev/null @@ -1,7 +0,0 @@ -// Slice a Matrix out of bounds -import newlinalg - -var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) - -print A[0..5, 0..2] -// expect error 'LnAlgMtrxIndxBnds' diff --git a/newlinalg/test/index/matrix_slice_infinite_range.morpho b/newlinalg/test/index/matrix_slice_infinite_range.morpho deleted file mode 100644 index 3a4466bd..00000000 --- a/newlinalg/test/index/matrix_slice_infinite_range.morpho +++ /dev/null @@ -1,7 +0,0 @@ -// Slice a Matrix with a range that doesn't halt -import newlinalg - -var A = Matrix(((1,2,3,4),(5,6,7,8),(9,10,11,12),(13,14,15,16))) - -print A[0..3:-1, 0] -// expect error 'LnAlgMtrxInvldArg' diff --git a/newlinalg/test/methods/complexmatrix_conj.morpho b/newlinalg/test/methods/complexmatrix_conj.morpho deleted file mode 100644 index a55c4473..00000000 --- a/newlinalg/test/methods/complexmatrix_conj.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Conjugate of a ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+4im -A[0,1]=2+3im -A[1,0]=3+2im -A[1,1]=4+1im - -print A.conj() -// expect: [ 1 - 4im 2 - 3im ] -// expect: [ 3 - 2im 4 - 1im ] diff --git a/newlinalg/test/methods/complexmatrix_conjTranspose.morpho b/newlinalg/test/methods/complexmatrix_conjTranspose.morpho deleted file mode 100644 index b616fc73..00000000 --- a/newlinalg/test/methods/complexmatrix_conjTranspose.morpho +++ /dev/null @@ -1,22 +0,0 @@ -// Conjugate of a ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+4im -A[0,1]=2+3im -A[1,0]=3+2im -A[1,1]=4+1im - -var B=A.conjTranspose() -print B -// expect: [ 1 - 4im 3 - 2im ] -// expect: [ 2 - 3im 4 - 1im ] - -for (ev in A.eigenvalues()) print isnumber(ev) -// expect: false -// expect: false - -var C=A+B // create a hermitian matrix -for (ev in C.eigenvalues()) print isnumber(ev) -// expect: true -// expect: true diff --git a/newlinalg/test/methods/complexmatrix_count.morpho b/newlinalg/test/methods/complexmatrix_count.morpho deleted file mode 100644 index 481b8eab..00000000 --- a/newlinalg/test/methods/complexmatrix_count.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Count elements in ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,3) -A[0,0]=1+1im -A[0,1]=2+2im -A[0,2]=3+3im -A[1,0]=4+4im -A[1,1]=5+5im -A[1,2]=6+6im - -print A.count() -// expect: 6 - diff --git a/newlinalg/test/methods/complexmatrix_dimensions.morpho b/newlinalg/test/methods/complexmatrix_dimensions.morpho deleted file mode 100644 index 1b6cb8b9..00000000 --- a/newlinalg/test/methods/complexmatrix_dimensions.morpho +++ /dev/null @@ -1,9 +0,0 @@ -// Get dimensions of ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,3) -A[0,0]=1+1im - -print A.dimensions() -// expect: (2, 3) - diff --git a/newlinalg/test/methods/complexmatrix_eigensystem.morpho b/newlinalg/test/methods/complexmatrix_eigensystem.morpho deleted file mode 100644 index ef8d5742..00000000 --- a/newlinalg/test/methods/complexmatrix_eigensystem.morpho +++ /dev/null @@ -1,25 +0,0 @@ -// Eigenvalues and eigenvectors -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=0im -A[0,1]=im -A[1,0]=im -A[1,1]=0im - -var es=A.eigensystem() -print es -// expect: ((0 + 1im, 0 - 1im), ) - -print es[0] -// expect: (0 + 1im, 0 - 1im) - -// Compare to analytical eigenvectors -var v = ComplexMatrix(2,2) -v[0,0]=sqrt(2)/2 -v[1,0]=sqrt(2)/2 -v[0,1]=sqrt(2)/2 -v[1,1]=-sqrt(2)/2 - -print abs((es[1]-v).sum()) < 1e-15 -// expect: true diff --git a/newlinalg/test/methods/complexmatrix_eigenvalues.morpho b/newlinalg/test/methods/complexmatrix_eigenvalues.morpho deleted file mode 100644 index 9a9adb81..00000000 --- a/newlinalg/test/methods/complexmatrix_eigenvalues.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Eigenvalues -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=0+0im -A[0,1]=im -A[1,0]=im -A[1,1]=0+0im - -print A.eigenvalues() -// expect: (0 + 1im, 0 - 1im) diff --git a/newlinalg/test/methods/complexmatrix_enumerate.morpho b/newlinalg/test/methods/complexmatrix_enumerate.morpho deleted file mode 100644 index c8ed0711..00000000 --- a/newlinalg/test/methods/complexmatrix_enumerate.morpho +++ /dev/null @@ -1,15 +0,0 @@ -// Enumerate elements of a matrix - -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0] = 1+im -A[0,1] = 0+0im -A[1,0] = 0+0im -A[1,1] = 1-im - -for (x in A) print x -// expect: 1 + 1im -// expect: 0 + 0im -// expect: 0 + 0im -// expect: 1 - 1im \ No newline at end of file diff --git a/newlinalg/test/methods/complexmatrix_format.morpho b/newlinalg/test/methods/complexmatrix_format.morpho deleted file mode 100644 index d5f830dd..00000000 --- a/newlinalg/test/methods/complexmatrix_format.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Format -import newlinalg -import constants - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[0,1]=exp(im*Pi/4) -A[1,0]=exp(-im*Pi/4) -A[1,1]=-1.5*(1+1im) - -print A.format("%5.2f") -// expect: [ 1.00 + 1.00im 0.71 + 0.71im ] -// expect: [ 0.71 - 0.71im -1.50 - 1.50im ] diff --git a/newlinalg/test/methods/complexmatrix_imag.morpho b/newlinalg/test/methods/complexmatrix_imag.morpho deleted file mode 100644 index 05324513..00000000 --- a/newlinalg/test/methods/complexmatrix_imag.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Inner product of ComplexMatrices (Frobenius inner product with conjugation) -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+4im -A[0,1]=2+3im -A[1,0]=3+2im -A[1,1]=4+1im - -print A.imag() -// expect: [ 4 3 ] -// expect: [ 2 1 ] diff --git a/newlinalg/test/methods/complexmatrix_inner.morpho b/newlinalg/test/methods/complexmatrix_inner.morpho deleted file mode 100644 index a9d6a7fe..00000000 --- a/newlinalg/test/methods/complexmatrix_inner.morpho +++ /dev/null @@ -1,17 +0,0 @@ -// Inner product of ComplexMatrices (Frobenius inner product with conjugation) -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im - -var B = ComplexMatrix(2,2) -B[0,0]=1 -B[0,1]=1im -B[1,0]=-1im -B[1,1]=1 - -print A.inner(B) -// expect: 4 - 6im diff --git a/newlinalg/test/methods/complexmatrix_inverse.morpho b/newlinalg/test/methods/complexmatrix_inverse.morpho deleted file mode 100644 index 9ae06829..00000000 --- a/newlinalg/test/methods/complexmatrix_inverse.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Inverse -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=0+0im -A[0,1]=1+im -A[1,0]=1-im -A[1,1]=0+0im - -print A.inverse() -// expect: [ 0 + 0im 0.5 + 0.5im ] -// expect: [ 0.5 - 0.5im 0 + 0im ] diff --git a/newlinalg/test/methods/complexmatrix_inverse_singular.morpho b/newlinalg/test/methods/complexmatrix_inverse_singular.morpho deleted file mode 100644 index 90f1e954..00000000 --- a/newlinalg/test/methods/complexmatrix_inverse_singular.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Inverse of singular ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+0im -A[0,1]=2+0im -A[1,0]=2+0im -A[1,1]=4+0im - -print A.inverse() -// expect error 'LnAlgMtrxSnglr' - diff --git a/newlinalg/test/methods/complexmatrix_norm.morpho b/newlinalg/test/methods/complexmatrix_norm.morpho deleted file mode 100644 index d3671f1a..00000000 --- a/newlinalg/test/methods/complexmatrix_norm.morpho +++ /dev/null @@ -1,21 +0,0 @@ -// Norm of a ComplexMatrix -import newlinalg -import constants - -var A = ComplexMatrix(2,2) -A[0,0]=1+im -A[0,1]=2+im -A[1,0]=3-3im -A[1,1]=4-4im - -print abs(A.norm(1) - (4*sqrt(2) + sqrt(5))) < 1e-15 -// expect: true - -print abs(A.norm(Inf) - 7*sqrt(2)) < 1e-15 -// expect: true - -print abs(A.norm() - sqrt(57)) < 1e-15 -// expect: true - -print A.norm(5) -// expect error 'LnAlgMtrxNrmArgs' \ No newline at end of file diff --git a/newlinalg/test/methods/complexmatrix_outer.morpho b/newlinalg/test/methods/complexmatrix_outer.morpho deleted file mode 100644 index 2999f4e3..00000000 --- a/newlinalg/test/methods/complexmatrix_outer.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Outer product of two vectors -import newlinalg - -var A = ComplexMatrix((1+1im,2-2im,3+3im)) -var B = ComplexMatrix((4+4im,5-5im)) - -print A.outer(B) -// expect: [ 0 + 8im 10 + 0im ] -// expect: [ 16 + 0im 0 - 20im ] -// expect: [ 0 + 24im 30 + 0im ] diff --git a/newlinalg/test/methods/complexmatrix_qr.morpho b/newlinalg/test/methods/complexmatrix_qr.morpho deleted file mode 100644 index 08eae0f8..00000000 --- a/newlinalg/test/methods/complexmatrix_qr.morpho +++ /dev/null @@ -1,145 +0,0 @@ -// QR Decomposition for ComplexMatrix -import newlinalg - -// Test with a square complex matrix -var A = ComplexMatrix(((1.0+1.0im, 2.0+0.0im, 3.0-1.0im), - (4.0+2.0im, 5.0+1.0im, 6.0+0.0im), - (7.0+0.0im, 8.0-1.0im, 9.0+2.0im))) - -var qr = A.qr() - -print qr -// expect: (, ) - -var Q = qr[0] -var R = qr[1] - -print Q.dimensions() -// expect: (3, 3) - -print R.dimensions() -// expect: (3, 3) - -// Verify Q is unitary: Q^H * Q should be approximately I (conjugate transpose) -var QHQ = Q.conjTranspose() * Q -var I = ComplexMatrix(3,3) -for (var i = 0; i < 3; i = i + 1) { - I[i,i] = 1.0 + 0.0im -} - -print (QHQ - I).norm() < 1e-10 -// expect: true - -// Verify R is upper triangular (check lower triangle is zero) -var R_lower_norm = 0.0 -for (var i = 0; i < 3; i = i + 1) { - for (var j = 0; j < i; j = j + 1) { - var val = R[i,j] - R_lower_norm += val.abs() - } -} -print R_lower_norm < 1e-10 -// expect: true - -// Verify Q * R has the right structure -var QR = Q * R -print QR.dimensions() -// expect: (3, 3) - -// Test with a non-square matrix (tall matrix) -var B = ComplexMatrix(4,2) -B[0,0] = 1.0 + 1.0im -B[0,1] = 2.0 + 0.0im -B[1,0] = 3.0 - 1.0im -B[1,1] = 4.0 + 2.0im -B[2,0] = 5.0 + 0.0im -B[2,1] = 6.0 - 1.0im -B[3,0] = 7.0 + 1.0im -B[3,1] = 8.0 + 0.0im - -var qr2 = B.qr() -var Q2 = qr2[0] -var R2 = qr2[1] - -print Q2.dimensions() -// expect: (4, 4) - -print R2.dimensions() -// expect: (4, 2) - -// Verify Q2 first 2 columns are orthonormal (unitary) -// For tall matrices, only the first min(m,n) columns from ZUNGQR are orthonormal -// The remaining columns are zero -var Q2_col0 = Q2.column(0) -var Q2_col1 = Q2.column(1) -// Check norms -var norm0 = Q2_col0.norm() -var norm1 = Q2_col1.norm() - -print abs(norm0-1) < 1e-7 // expect: true -print abs(norm1-1) < 1e-7 // expect: true - -// Check orthogonality: inner product should be close to zero -var inner01 = Q2_col0.inner(Q2_col1) -var inner01_mag = inner01.abs() -print inner01_mag < 1e-10 -// expect: true - -// Verify R2 is upper triangular -var R2_lower_norm = 0.0 -for (var i = 0; i < 4; i = i + 1) { - for (var j = 0; j < 2; j = j + 1) { - if (i > j) { - var val = R2[i,j] - R2_lower_norm = val.abs() - } - } -} -print R2_lower_norm < 1e-10 -// expect: true - -// Test with a wide matrix -var C = ComplexMatrix(2,4) -C[0,0] = 1.0 + 1.0im -C[0,1] = 2.0 + 0.0im -C[0,2] = 3.0 - 1.0im -C[0,3] = 4.0 + 2.0im -C[1,0] = 5.0 + 0.0im -C[1,1] = 6.0 - 1.0im -C[1,2] = 7.0 + 1.0im -C[1,3] = 8.0 + 0.0im - -var qr3 = C.qr() -var Q3 = qr3[0] -var R3 = qr3[1] - -print Q3.dimensions() -// expect: (2, 2) - -print R3.dimensions() -// expect: (2, 4) - -// Verify Q3 is unitary -var Q3HQ3 = Q3.conjTranspose() * Q3 -var I2 = ComplexMatrix(2,2) -for (var i = 0; i < 2; i = i + 1) { - I2[i,i] = 1.0 + 0.0im -} -print (Q3HQ3 - I2).norm() < 1e-10 -// expect: true - -// Test with real-valued complex matrix (should work like real matrix) -var D = ComplexMatrix(((1.0+0.0im, 0.0+0.0im), - (0.0+0.0im, 2.0+0.0im))) -var qr4 = D.qr() -var Q4 = qr4[0] -var R4 = qr4[1] - -// Verify Q4 is unitary -var Q4HQ4 = Q4.conjTranspose() * Q4 -var I2b = ComplexMatrix(2,2) -for (var i = 0; i < 2; i = i + 1) { - I2b[i,i] = 1.0 + 0.0im -} -print (Q4HQ4 - I2b).norm() < 1e-10 -// expect: true diff --git a/newlinalg/test/methods/complexmatrix_real.morpho b/newlinalg/test/methods/complexmatrix_real.morpho deleted file mode 100644 index 1c508280..00000000 --- a/newlinalg/test/methods/complexmatrix_real.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Real part of a ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+4im -A[0,1]=2+3im -A[1,0]=3+2im -A[1,1]=4+1im - -print A.real() -// expect: [ 1 2 ] -// expect: [ 3 4 ] diff --git a/newlinalg/test/methods/complexmatrix_reshape.morpho b/newlinalg/test/methods/complexmatrix_reshape.morpho deleted file mode 100644 index 5f60e09a..00000000 --- a/newlinalg/test/methods/complexmatrix_reshape.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Reshape ComplexMatrix -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+1im -A[1,0]=2+2im -A[0,1]=3+3im -A[1,1]=4+4im -print A -// expect: [ 1 + 1im 3 + 3im ] -// expect: [ 2 + 2im 4 + 4im ] - -A.reshape(4,1) -print A -// expect: [ 1 + 1im ] -// expect: [ 2 + 2im ] -// expect: [ 3 + 3im ] -// expect: [ 4 + 4im ] - diff --git a/newlinalg/test/methods/complexmatrix_roll.morpho b/newlinalg/test/methods/complexmatrix_roll.morpho deleted file mode 100644 index e3cf12ca..00000000 --- a/newlinalg/test/methods/complexmatrix_roll.morpho +++ /dev/null @@ -1,51 +0,0 @@ -// Roll contents of a matrix -import newlinalg - -var A = ComplexMatrix(3,3) -var k=0 -for (i in 0...3) for (j in 0...3) { A[i,j] = Complex(k,k); k+=1 } - -print A -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] - -print A.roll(1,1) -// expect: [ 2 + 2im 0 + 0im 1 + 1im ] -// expect: [ 5 + 5im 3 + 3im 4 + 4im ] -// expect: [ 8 + 8im 6 + 6im 7 + 7im ] - -print A.roll(2,1) -// expect: [ 1 + 1im 2 + 2im 0 + 0im ] -// expect: [ 4 + 4im 5 + 5im 3 + 3im ] -// expect: [ 7 + 7im 8 + 8im 6 + 6im ] - -print A.roll(3,1) -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] - -print A.roll(4,1) -// expect: [ 2 + 2im 0 + 0im 1 + 1im ] -// expect: [ 5 + 5im 3 + 3im 4 + 4im ] -// expect: [ 8 + 8im 6 + 6im 7 + 7im ] - -print A.roll(-1,0) -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] - -print A.roll(-2,0) -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] - -print A.roll(-3,0) -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] - -print A.roll(-4,0) -// expect: [ 3 + 3im 4 + 4im 5 + 5im ] -// expect: [ 6 + 6im 7 + 7im 8 + 8im ] -// expect: [ 0 + 0im 1 + 1im 2 + 2im ] diff --git a/newlinalg/test/methods/complexmatrix_roll_negative.morpho b/newlinalg/test/methods/complexmatrix_roll_negative.morpho deleted file mode 100644 index 3310c4eb..00000000 --- a/newlinalg/test/methods/complexmatrix_roll_negative.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Negative roll values for ComplexMatrix - -import newlinalg - -var A = ComplexMatrix(3,1) -A[0,0]=1+1im -A[1,0]=2+2im -A[2,0]=3+3im - -print A.roll(-1) -// expect: [ 2 + 2im ] -// expect: [ 3 + 3im ] -// expect: [ 1 + 1im ] - diff --git a/newlinalg/test/methods/complexmatrix_sum.morpho b/newlinalg/test/methods/complexmatrix_sum.morpho deleted file mode 100644 index 3354d422..00000000 --- a/newlinalg/test/methods/complexmatrix_sum.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Sum -import newlinalg - -var A = ComplexMatrix(3,2) -A[0,0]=1+im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im -A[2,0]=5+5im -A[2,1]=6+6im - -print A.sum() -// expect: 21 + 21im diff --git a/newlinalg/test/methods/complexmatrix_svd.morpho b/newlinalg/test/methods/complexmatrix_svd.morpho deleted file mode 100644 index 68aa3368..00000000 --- a/newlinalg/test/methods/complexmatrix_svd.morpho +++ /dev/null @@ -1,22 +0,0 @@ -// Singular Value Decomposition -import newlinalg - -var A = ComplexMatrix(((1+1im,0+0im),(0+0im,2+2im))) - -var svd = A.svd() - -// Test reconstruction: U * S * V^T should approximately equal A -var U = svd[0] -var S = svd[1] -var V = svd[2] - -// Create diagonal matrix from singular values -var Sdiag = ComplexMatrix(2,2) -Sdiag[0,0] = S[0] -Sdiag[1,1] = S[1] - -var VT = V.transpose() -var reconstructed = U * Sdiag * VT - -print (reconstructed - A).norm() < 1e-10 -// expect: true diff --git a/newlinalg/test/methods/complexmatrix_trace.morpho b/newlinalg/test/methods/complexmatrix_trace.morpho deleted file mode 100644 index 694a60aa..00000000 --- a/newlinalg/test/methods/complexmatrix_trace.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Inverse -import newlinalg - -var A = ComplexMatrix(2,2) -A[0,0]=1+4im -A[0,1]=2+3im -A[1,0]=3+2im -A[1,1]=4+1im - -print A.trace() -// expect: 5 + 5im diff --git a/newlinalg/test/methods/complexmatrix_transpose.morpho b/newlinalg/test/methods/complexmatrix_transpose.morpho deleted file mode 100644 index a6815d88..00000000 --- a/newlinalg/test/methods/complexmatrix_transpose.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Inverse -import newlinalg - -var A = ComplexMatrix(3,2) -A[0,0]=1+1im -A[0,1]=2+2im -A[1,0]=3+3im -A[1,1]=4+4im -A[2,0]=5+5im -A[2,1]=6+6im - -print A.transpose() -// expect: [ 1 + 1im 3 + 3im 5 + 5im ] -// expect: [ 2 + 2im 4 + 4im 6 + 6im ] diff --git a/newlinalg/test/methods/matrix_count.morpho b/newlinalg/test/methods/matrix_count.morpho deleted file mode 100644 index b5a8c2fa..00000000 --- a/newlinalg/test/methods/matrix_count.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Count elements in Matrix -import newlinalg - -var A = Matrix(2,3) -A[0,0]=1 -A[0,1]=2 -A[0,2]=3 -A[1,0]=4 -A[1,1]=5 -A[1,2]=6 - -print A.count() -// expect: 6 - diff --git a/newlinalg/test/methods/matrix_dimensions.morpho b/newlinalg/test/methods/matrix_dimensions.morpho deleted file mode 100644 index 4712051e..00000000 --- a/newlinalg/test/methods/matrix_dimensions.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Get dimensions of Matrix -import newlinalg - -var A = Matrix(2,3) -print A.dimensions() -// expect: (2, 3) - -var a = Matrix([[0.8, -0.4], [0.4, 0.8]]) -print a.dimensions() -// expect: (2, 2) diff --git a/newlinalg/test/methods/matrix_eigensystem.morpho b/newlinalg/test/methods/matrix_eigensystem.morpho deleted file mode 100644 index 1b2cbff7..00000000 --- a/newlinalg/test/methods/matrix_eigensystem.morpho +++ /dev/null @@ -1,20 +0,0 @@ -// Eigenvalues and eigenvectors -import newlinalg - -var A = Matrix(2,2) -A[0,0]=0 -A[0,1]=1 -A[1,0]=1 -A[1,1]=0 - -var es=A.eigensystem() - -print es -// expect: ((1, -1), ) - -print es[0] -// expect: (1, -1) - -print es[1].format("%.2g") -// expect: [ 0.71 -0.71 ] -// expect: [ 0.71 0.71 ] diff --git a/newlinalg/test/methods/matrix_eigenvalues.morpho b/newlinalg/test/methods/matrix_eigenvalues.morpho deleted file mode 100644 index 0ec4f41c..00000000 --- a/newlinalg/test/methods/matrix_eigenvalues.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Eigenvalues -import newlinalg - -var A = Matrix(2,2) -A[0,0]=0 -A[0,1]=1 -A[1,0]=1 -A[1,1]=0 - -print A.eigenvalues() -// expect: (1, -1) diff --git a/newlinalg/test/methods/matrix_enumerate.morpho b/newlinalg/test/methods/matrix_enumerate.morpho deleted file mode 100644 index a6f7cf7a..00000000 --- a/newlinalg/test/methods/matrix_enumerate.morpho +++ /dev/null @@ -1,15 +0,0 @@ -// Enumerate elements of a matrix - -import newlinalg - -var A = Matrix(2,2) -A[0,0] = 1 -A[1,0] = 2 -A[0,1] = 3 -A[1,1] = 4 - -for (x in A) print x -// expect: 1 -// expect: 2 -// expect: 3 -// expect: 4 diff --git a/newlinalg/test/methods/matrix_format.morpho b/newlinalg/test/methods/matrix_format.morpho deleted file mode 100644 index 06495b22..00000000 --- a/newlinalg/test/methods/matrix_format.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Format -import newlinalg -import constants - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=Pi/2 -A[1,0]=Pi/2 -A[1,1]=-1.5 - -print A.format("%5.2f") -// expect: [ 1.00 1.57 ] -// expect: [ 1.57 -1.50 ] diff --git a/newlinalg/test/methods/matrix_inner.morpho b/newlinalg/test/methods/matrix_inner.morpho deleted file mode 100644 index c5539cd9..00000000 --- a/newlinalg/test/methods/matrix_inner.morpho +++ /dev/null @@ -1,18 +0,0 @@ -// Inner product of XMatrices -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -var B = Matrix(2,2) -B[0,0]=1 -B[0,1]=0 -B[1,0]=0 -B[1,1]=1 - -print A.inner(B) -// expect: 5 - diff --git a/newlinalg/test/methods/matrix_inverse.morpho b/newlinalg/test/methods/matrix_inverse.morpho deleted file mode 100644 index 2f269735..00000000 --- a/newlinalg/test/methods/matrix_inverse.morpho +++ /dev/null @@ -1,12 +0,0 @@ -// Inverse -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -print A.inverse() -// expect: [ -2 1 ] -// expect: [ 1.5 -0.5 ] diff --git a/newlinalg/test/methods/matrix_inverse_singular.morpho b/newlinalg/test/methods/matrix_inverse_singular.morpho deleted file mode 100644 index 7428e58f..00000000 --- a/newlinalg/test/methods/matrix_inverse_singular.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Inverse -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=2 -A[1,1]=4 - -print A.inverse() -// expect error 'LnAlgMtrxSnglr' diff --git a/newlinalg/test/methods/matrix_norm.morpho b/newlinalg/test/methods/matrix_norm.morpho deleted file mode 100644 index 179158c8..00000000 --- a/newlinalg/test/methods/matrix_norm.morpho +++ /dev/null @@ -1,21 +0,0 @@ -// Norm of an Matrix -import newlinalg -import constants - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=-2 -A[1,0]=3 -A[1,1]=-4 - -print A.norm(1) -// expect: 6 - -print A.norm(Inf) -// expect: 7 - -print abs(A.norm() - sqrt(30)) < 1e-15 -// expect: true - -print A.norm(5) -// expect error 'LnAlgMtrxNrmArgs' \ No newline at end of file diff --git a/newlinalg/test/methods/matrix_outer.morpho b/newlinalg/test/methods/matrix_outer.morpho deleted file mode 100644 index a190ed5d..00000000 --- a/newlinalg/test/methods/matrix_outer.morpho +++ /dev/null @@ -1,10 +0,0 @@ -// Outer product of two vectors -import newlinalg - -var A = Matrix((1,2,3)) -var B = Matrix((4,5)) - -print A.outer(B) -// expect: [ 4 5 ] -// expect: [ 8 10 ] -// expect: [ 12 15 ] diff --git a/newlinalg/test/methods/matrix_qr.morpho b/newlinalg/test/methods/matrix_qr.morpho deleted file mode 100644 index 50e1abcb..00000000 --- a/newlinalg/test/methods/matrix_qr.morpho +++ /dev/null @@ -1,135 +0,0 @@ -// QR Decomposition -import newlinalg - -// Test with a square matrix (this one is singular, so R will have a zero on the diagonal) -var A = Matrix(((1.0,2.0,3.0),(4.0,5.0,6.0),(7.0,8.0,9.0))) - -var qr = A.qr() - -print qr -// expect: (, ) - -var Q = qr[0] -var R = qr[1] - -print Q.dimensions() -// expect: (3, 3) - -print R.dimensions() -// expect: (3, 3) - -// Verify Q is orthogonal: Q^T * Q should be approximately I -var QTQ = Q.transpose() * Q -var I = IdentityMatrix(3) - -print (QTQ - I).norm() < 1e-10 -// expect: true - -// Verify R is upper triangular (check lower triangle is zero) -var R_lower_norm = 0.0 -for (var i = 0; i < 3; i = i + 1) { - for (var j = 0; j < i; j = j + 1) { - R_lower_norm = R_lower_norm + R[i,j]*R[i,j] - } -} -print R_lower_norm < 1e-10 -// expect: true - -// Check R's diagonal - since A is singular, one diagonal element should be (close to) zero -// This indicates the matrix has rank 2 (not full rank) -print abs(R[2,2]) < 1e-8 -// expect: true - -// Verify Q * R reconstruction -var QR = Q * R -print (QR - A).norm() < 1e-10 -// expect: true - -// Test with a non-square matrix (tall matrix) -var B = Matrix(4,2) -B[0,0] = 1.0 -B[0,1] = 2.0 -B[1,0] = 3.0 -B[1,1] = 4.0 -B[2,0] = 5.0 -B[2,1] = 6.0 -B[3,0] = 7.0 -B[3,1] = 8.0 - -var qr2 = B.qr() -var Q2 = qr2[0] -var R2 = qr2[1] - -print Q2.dimensions() -// expect: (4, 4) - -print R2.dimensions() -// expect: (4, 2) - -// Verify Q2 first 2 columns are orthonormal -// For tall matrices, only the first min(m,n) columns from DORGQR are orthonormal -// The remaining columns are zero -var Q2_col0 = Q2.column(0) -var Q2_col1 = Q2.column(1) -// Check norms -print Q2_col0.norm() < 1.0 + 1e-10 and Q2_col0.norm() > 1.0 - 1e-10 -// expect: true -print Q2_col1.norm() < 1.0 + 1e-10 and Q2_col1.norm() > 1.0 - 1e-10 -// expect: true -// Check orthogonality: dot product should be close to zero -var dot01 = Q2_col0.inner(Q2_col1) -print dot01 < 1e-10 and dot01 > -1e-10 -// expect: true - -// Verify R2 is upper triangular -var R2_lower_norm = 0.0 -for (var i = 0; i < 4; i = i + 1) { - for (var j = 0; j < 2; j = j + 1) { - if (i > j) { - R2_lower_norm = R2_lower_norm + R2[i,j]*R2[i,j] - } - } -} -print R2_lower_norm < 1e-10 -// expect: true - -// Test with a wide matrix -var C = Matrix(2,4) -C[0,0] = 1.0 -C[0,1] = 2.0 -C[0,2] = 3.0 -C[0,3] = 4.0 -C[1,0] = 5.0 -C[1,1] = 6.0 -C[1,2] = 7.0 -C[1,3] = 8.0 - -var qr3 = C.qr() -var Q3 = qr3[0] -var R3 = qr3[1] - -print Q3.dimensions() -// expect: (2, 2) - -print R3.dimensions() -// expect: (2, 4) - -// Verify Q3 is orthogonal -var Q3TQ3 = Q3.transpose() * Q3 -var I2 = IdentityMatrix(2) -print (Q3TQ3 - I2).norm() < 1e-10 -// expect: true - -// Test with identity matrix -var I3 = IdentityMatrix(3) -var qr4 = I3.qr() -var Q4 = qr4[0] -var R4 = qr4[1] - -// Q should be close to identity -print (Q4 - I3).norm() < 1e-10 -// expect: true - -// R should be close to identity -print (R4 - I3).norm() < 1e-10 -// expect: true diff --git a/newlinalg/test/methods/matrix_reshape.morpho b/newlinalg/test/methods/matrix_reshape.morpho deleted file mode 100644 index f4825fd9..00000000 --- a/newlinalg/test/methods/matrix_reshape.morpho +++ /dev/null @@ -1,19 +0,0 @@ -// Reshape Matrix -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[1,0]=2 -A[0,1]=3 -A[1,1]=4 -print A -// expect: [ 1 3 ] -// expect: [ 2 4 ] - -A.reshape(4,1) -print A -// expect: [ 1 ] -// expect: [ 2 ] -// expect: [ 3 ] -// expect: [ 4 ] - diff --git a/newlinalg/test/methods/matrix_roll.morpho b/newlinalg/test/methods/matrix_roll.morpho deleted file mode 100644 index 379cb426..00000000 --- a/newlinalg/test/methods/matrix_roll.morpho +++ /dev/null @@ -1,51 +0,0 @@ -// Roll contents of a matrix -import newlinalg - -var A = Matrix(3,3) -var k=0 -for (i in 0...3) for (j in 0...3) { A[i,j] = k; k+=1 } - -print A -// expect: [ 0 1 2 ] -// expect: [ 3 4 5 ] -// expect: [ 6 7 8 ] - -print A.roll(1,1) -// expect: [ 2 0 1 ] -// expect: [ 5 3 4 ] -// expect: [ 8 6 7 ] - -print A.roll(2,1) -// expect: [ 1 2 0 ] -// expect: [ 4 5 3 ] -// expect: [ 7 8 6 ] - -print A.roll(3,1) -// expect: [ 0 1 2 ] -// expect: [ 3 4 5 ] -// expect: [ 6 7 8 ] - -print A.roll(4,1) -// expect: [ 2 0 1 ] -// expect: [ 5 3 4 ] -// expect: [ 8 6 7 ] - -print A.roll(-1,0) -// expect: [ 3 4 5 ] -// expect: [ 6 7 8 ] -// expect: [ 0 1 2 ] - -print A.roll(-2,0) -// expect: [ 6 7 8 ] -// expect: [ 0 1 2 ] -// expect: [ 3 4 5 ] - -print A.roll(-3,0) -// expect: [ 0 1 2 ] -// expect: [ 3 4 5 ] -// expect: [ 6 7 8 ] - -print A.roll(-4,0) -// expect: [ 3 4 5 ] -// expect: [ 6 7 8 ] -// expect: [ 0 1 2 ] diff --git a/newlinalg/test/methods/matrix_sum.morpho b/newlinalg/test/methods/matrix_sum.morpho deleted file mode 100644 index 8f2e4fd1..00000000 --- a/newlinalg/test/methods/matrix_sum.morpho +++ /dev/null @@ -1,13 +0,0 @@ -// Sum -import newlinalg - -var A = Matrix(3,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 -A[2,0]=5 -A[2,1]=6 - -print A.sum() -// expect: 21 diff --git a/newlinalg/test/methods/matrix_svd.morpho b/newlinalg/test/methods/matrix_svd.morpho deleted file mode 100644 index 16bea32c..00000000 --- a/newlinalg/test/methods/matrix_svd.morpho +++ /dev/null @@ -1,54 +0,0 @@ -// Singular Value Decomposition -import newlinalg - -var A = Matrix(((1,0),(0,2))) - -var svd = A.svd() - -print svd -// expect: (, (2, 1), ) - -print (svd[0] - Matrix(((0,1),(1,0)))).norm() < 1e-10 -// expect: true - -print svd[1] -// expect: (2, 1) - -print (svd[2] - Matrix(((0,1),(1,0)))).norm() < 1e-10 -// expect: true - -// Test reconstruction: U * S * V^T should approximately equal A -var U = svd[0] -var S = svd[1] -var V = svd[2] - -// Create diagonal matrix from singular values -var Sdiag = Matrix(2,2) -Sdiag[0,0] = S[0] -Sdiag[1,1] = S[1] - -var VT = V.transpose() -var reconstructed = U * Sdiag * VT - -print (reconstructed - A).norm() < 1e-10 -// expect: true - -// Test with a non-square matrix -var B = Matrix(3,2) -B[0,0]=1 -B[0,1]=0 -B[1,0]=0 -B[1,1]=2 -B[2,0]=0 -B[2,1]=0 - -var svd2 = B.svd() - -print svd2[0].dimensions() -// expect: (3, 3) - -print svd2[1] -// expect: (2, 1) - -print svd2[2].dimensions() -// expect: (2, 2) diff --git a/newlinalg/test/methods/matrix_trace.morpho b/newlinalg/test/methods/matrix_trace.morpho deleted file mode 100644 index 5ee330b9..00000000 --- a/newlinalg/test/methods/matrix_trace.morpho +++ /dev/null @@ -1,11 +0,0 @@ -// Inverse -import newlinalg - -var A = Matrix(2,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 - -print A.trace() -// expect: 5 diff --git a/newlinalg/test/methods/matrix_transpose.morpho b/newlinalg/test/methods/matrix_transpose.morpho deleted file mode 100644 index a0454786..00000000 --- a/newlinalg/test/methods/matrix_transpose.morpho +++ /dev/null @@ -1,14 +0,0 @@ -// Inverse -import newlinalg - -var A = Matrix(3,2) -A[0,0]=1 -A[0,1]=2 -A[1,0]=3 -A[1,1]=4 -A[2,0]=5 -A[2,1]=6 - -print A.transpose() -// expect: [ 1 3 5 ] -// expect: [ 2 4 6 ] \ No newline at end of file diff --git a/newlinalg/test/test.py b/newlinalg/test/test.py deleted file mode 100755 index 7fdaad27..00000000 --- a/newlinalg/test/test.py +++ /dev/null @@ -1,212 +0,0 @@ -#!/usr/bin/env python3 -# Simple automated testing -# T J Atherton Sept 2020 -# -# Each input file is supplied to a test command, the results -# are piped to a file and the output is compared with expectations -# extracted from the input file. -# Expectations are coded into comments in the input file as follows: - -# import necessary modules -import os, glob, sys -import regex as rx -from functools import reduce -import operator -import colored -from colored import stylize - -# define what command to use to invoke the interpreter -command = 'morpho6' - -# define the file extension to test -ext = 'morpho' - -# We reduce any errors to this value -err = '@error' - -# We reduce any stacktrace lines to this values -stk = '@stacktrace' - -# Removes control characters -def remove_control_characters(str): - return rx.sub(r'\x1b[^m]*m', '', str.rstrip()) - -# Simplify error reports -def simplify_errors(str): - # this monster regex extraxts NAME from error messages of the form error ... 'NAME' - return rx.sub('.*[E|e]rror[ :]*\'([A-z;a-z]*)\'.*', err+'[\\1]', str.rstrip()) - -# Simplify stacktrace -def simplify_stacktrace(str): - return rx.sub(r'.*at line.*', stk, str.rstrip()) - -# Find an expected value -def findvalue(str): - return rx.findall(r'// expect: ?(.*)', str) - -# Find an expected error -def finderror(str): - #return rx.findall(r'\/\/ expect ?(.*) error', str) - return rx.findall(r'.*[E|e]rror[ :].*?(.*)', str) - -# Find an expected error -def iserror(str): - #return rx.findall(r'\/\/ expect ?(.*) error', str) - test=rx.findall(r'@error.*', str) - return len(test)>0 - -# Find an expected error -def isin(str): - #return rx.findall(r'\/\/ expect ?(.*) error', str) - test=rx.findall(r'.*in .*', str) - return len(test)>0 - -# Remove elements from a list -def remove(list, remove_list): - test_list = list - for i in remove_list: - try: - test_list.remove(i) - except ValueError: - pass - return test_list - -# Find what is expected -def findexpected(str): - out = finderror(str) # is it an error? - if (out!=[]): - out = [simplify_errors(str)] # if so, simplify it - else: - out = findvalue(str) # or something else? - return out - -# Works out what we expect from the input file -def getexpect(filepath): - # Load the file - file_object = open(filepath, 'r', encoding="utf8") - lines = file_object.readlines() - file_object.close() - #Find any expected values over all lines - if (lines != []): - out = list(map(findexpected, lines)) - out = reduce(operator.concat, out) - else: - out = [] - return out - -# Gets the output generated -def getoutput(filepath): - # Load the file - file_object = open(filepath, 'r', encoding="utf8") - lines = file_object.readlines() - file_object.close() - # remove all control characters - lines = list(map(remove_control_characters, lines)) - # Convert errors to our universal error code - lines = list(map(simplify_errors, lines)) - # Identify stack trace lines - lines = list(map(simplify_stacktrace, lines)) - for i in range(len(lines)-1): - if (iserror(lines[i])): - if (isin(lines[i+1])): - lines[i+1]=stk - # and remove them - return list(filter(lambda x: x!=stk, lines)) - -# Test a file -def test(file,testLog,CI): - ret = 0 - if not CI: - print(file+":", end=" ") - - # Create a temporary file in the same directory - tmp = file + '.out' - - #Get the expected output - expected=getexpect(file) - - # Run the test - os.system(command + ' ' +file + ' > ' + tmp) - - # If we produced output - if os.path.exists(tmp): - # Get the output - out=getoutput(tmp) - - # Was it expected? - if(expected==out): - if not CI: - print(stylize("Passed",colored.fg("green"))) - ret = 1 - else: - if not CI: - print(stylize("Failed",colored.fg("red"))) - print(" Expected: ", expected) - print(" Output: ", out) - else: - print("\n::error file = {",file,"}::{",file," Failed}") - - - #also print to the test log - print(file+":", end=" ",file = testLog) - print("Failed", file = testLog) - - if len(out) == len(expected): - failedTests = list(i for i in range(len(out)) if expected[i] != out[i]) - print("Tests " + str(failedTests) + " did not match expected results.", file = testLog) - for testNum in failedTests: - print("Test "+str(testNum), file = testLog) - print(" Expected: ", expected[testNum], file = testLog) - print(" Output: ", out[testNum], file = testLog) - else: - print(" Expected: ", expected, file = testLog) - print(" Output: ", out, file = testLog) - - - print("\n",file = testLog) - - - # Delete the temporary file - os.remove(tmp) - - return ret - -print('--Begin testing---------------------') - -# open a test log -# write failures to log -success=0 # number of successful tests -total=0 # total number of tests - -# look for a command line arguement that says -# this is being run for continous integration -CI = False -# Also look for a command line argument that says this is being run with multiple threads -MT = False -for arg in sys.argv: - if arg == '-c': # if the argument is -c, then we are running in CI mode - CI = True - if arg == '-m': # if the argument is -m, then we are running in multi-thread mode - MT = True - -failedTestsFileName = "FailedTests.txt" -if MT: - failedTestsFileName = "FailedTestsMultiThreaded.txt" - command += " -w4" - print("Running tests with 4 threads") - -files=glob.glob('**/**.'+ext, recursive=True) -with open(failedTestsFileName,'w', encoding="utf8") as testLog: - - for f in files: - # print(f) - success+=test(f,testLog,CI) - total+=1 - -# if (not CI) and (not success == total): -# os.system("emacs FailedTests.txt &") - -print('--End testing-----------------------') -print(success, 'out of', total, 'tests passed.') -if CI and success Date: Mon, 26 Jan 2026 14:09:06 -0500 Subject: [PATCH 154/156] Update LAPACKE path for linux build --- src/linalg/complexmatrix.c | 99 ++++++++++++++++++++------------------ src/linalg/matrix.c | 20 ++++---- src/linalg/matrix.h | 8 +++ src/support/platform.c | 34 +++++++------ 4 files changed, 88 insertions(+), 73 deletions(-) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index a24b9655..9d63416c 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -57,10 +57,10 @@ static double _normfn(objectmatrix *a, matrix_norm_t nrm) { int nrows=a->nrows, ncols=a->ncols; #ifdef MORPHO_LINALG_USE_LAPACKE - return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, a->elements, a->nrows); + return LAPACKE_zlange(LAPACK_COL_MAJOR, cnrm, a->nrows, a->ncols, (linalg_complexdouble_t *) a->elements, a->nrows); #else double work[a->nrows]; - return zlange_(&cnrm, &nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, work); + return zlange_(&cnrm, &nrows, &ncols, (linalg_complexdouble_t *) a->elements, &nrows, work); #endif } @@ -69,10 +69,10 @@ static linalgError_t _solve(objectmatrix *a, objectmatrix *b, int *pivot) { int n=a->nrows, nrhs = b->ncols, info; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, a->elements, n, pivot, b->elements, n); + info=LAPACKE_zgesv(LAPACK_COL_MAJOR, n, nrhs, (linalg_complexdouble_t *) a->elements, n, pivot, (linalg_complexdouble_t *) b->elements, n); #else - zgesv_(&n, &nrhs, (__LAPACK_double_complex *) a->elements, - &n, pivot, (__LAPACK_double_complex *) b->elements, &n, &info); + zgesv_(&n, &nrhs, (linalg_complexdouble_t *) a->elements, + &n, pivot, (linalg_complexdouble_t *) b->elements, &n, &info); #endif return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); @@ -83,10 +83,10 @@ static linalgError_t _eigen(objectmatrix *a, MorphoComplex *w, objectmatrix *vec int info, n=a->nrows; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, a->elements, n, (__LAPACK_double_complex *) w, NULL, n, (vec ? vec->elements : NULL), n); + info=LAPACKE_zgeev(LAPACK_COL_MAJOR, 'N', (vec ? 'V' : 'N'), n, (linalg_complexdouble_t *) a->elements, n, (linalg_complexdouble_t *) w, NULL, n, (linalg_complexdouble_t *) (vec ? vec->elements : NULL), n); #else int lwork=4*n; MorphoComplex work[4*n]; double rwork[2*n]; - zgeev_("N", (vec ? "V" : "N"), &n, (__LAPACK_double_complex *) a->elements, &n, (__LAPACK_double_complex *) w, NULL, &n, (__LAPACK_double_complex *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); + zgeev_("N", (vec ? "V" : "N"), &n, (linalg_complexdouble_t *) a->elements, &n, (linalg_complexdouble_t *) w, NULL, &n, (linalg_complexdouble_t *) (vec ? vec->elements : NULL), &n, work, &lwork, rwork, &info); #endif return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS)); @@ -98,35 +98,37 @@ static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmat int minmn = (m < n) ? m : n; #ifdef MORPHO_LINALG_USE_LAPACKE + double* superb = malloc(minmn * sizeof(double)); info = LAPACKE_zgesvd(LAPACK_COL_MAJOR, (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT m, n, - (__LAPACK_double_complex *) a->elements, m, // input matrix A (overwritten) + (linalg_complexdouble_t *) a->elements, m, // input matrix A (overwritten) s, // singular values (min(m,n)) - (__LAPACK_double_complex *) (u ? u->elements : NULL), m, // U matrix (m×m) - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), n // VT matrix (n×n) + (linalg_complexdouble_t *) (u ? u->elements : NULL), m, // U matrix (m×m) + (linalg_complexdouble_t *) (vt ? vt->elements : NULL), n, // VT matrix (n×n) + superb ); #else int lwork = -1; - __LAPACK_double_complex work_query; + linalg_complexdouble_t work_query; double rwork[5 * minmn]; // rwork needs at least 5*min(m,n) for zgesvd // Query optimal work size zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, - (__LAPACK_double_complex *) a->elements, &m, s, - (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + (linalg_complexdouble_t *) a->elements, &m, s, + (linalg_complexdouble_t *) (u ? u->elements : NULL), &m, + (linalg_complexdouble_t *) (vt ? vt->elements : NULL), &n, &work_query, &lwork, rwork, &info); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); lwork = (int)creal(work_query); - __LAPACK_double_complex work[lwork]; + linalg_complexdouble_t work[lwork]; zgesvd_((u ? "A" : "N"), (vt ? "A" : "N"), &m, &n, - (__LAPACK_double_complex *) a->elements, &m, s, - (__LAPACK_double_complex *) (u ? u->elements : NULL), &m, - (__LAPACK_double_complex *) (vt ? vt->elements : NULL), &n, + (linalg_complexdouble_t *) a->elements, &m, s, + (linalg_complexdouble_t *) (u ? u->elements : NULL), &m, + (linalg_complexdouble_t *) (vt ? vt->elements : NULL), &n, work, &lwork, rwork, &info); #endif @@ -137,58 +139,59 @@ static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmat static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { int info, m=a->nrows, n=a->ncols; int minmn = (m < n) ? m : n; - __LAPACK_double_complex tau[minmn]; // Compute QR factorization without pivoting: A = Q*R #ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_zgeqrf(LAPACK_COL_MAJOR, m, n, (__LAPACK_double_complex *) a->elements, m, tau); + linalg_complexdouble_t tau[minmn]; + info = LAPACKE_zgeqrf(LAPACK_COL_MAJOR, m, n, (linalg_complexdouble_t *) a->elements, m, tau); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); #else + linalg_complexdouble_t tau[minmn]; int lwork = -1; - __LAPACK_double_complex work_query; + linalg_complexdouble_t work_query; // Query optimal work size for ZGEQRF, which is reused for ZUNGQR - zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, &work_query, &lwork, &info); + zgeqrf_(&m, &n, (linalg_complexdouble_t *) a->elements, &m, tau, &work_query, &lwork, &info); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); int lwork_geqrf = (int) creal(work_query); - __LAPACK_double_complex work[lwork_geqrf]; + linalg_complexdouble_t work[lwork_geqrf]; lwork = lwork_geqrf; // Compute QR factorization without pivoting - zgeqrf_(&m, &n, (__LAPACK_double_complex *) a->elements, &m, tau, work, &lwork, &info); + zgeqrf_(&m, &n, (linalg_complexdouble_t *) a->elements, &m, tau, work, &lwork, &info); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); #endif // Extract R (upper triangle of a) into r // Copy entire matrix first then zero out below the diagonal matrix_copy(a, r); - __LAPACK_double_complex *relems = (__LAPACK_double_complex *) r->elements; + linalg_complexdouble_t *relems = (linalg_complexdouble_t *) r->elements; for (int j = 0; j < n && j < m - 1; j++) { - memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(__LAPACK_double_complex)); + memset(&relems[j * m + (j + 1)], 0, (m - j - 1) * sizeof(linalg_complexdouble_t)); } // Generate Q from reflectors if (q) { // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) // ZGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns - __LAPACK_double_complex *aelems = (__LAPACK_double_complex *) a->elements; - __LAPACK_double_complex *qelems = (__LAPACK_double_complex *) q->elements; + linalg_complexdouble_t *aelems = (linalg_complexdouble_t *) a->elements; + linalg_complexdouble_t *qelems = (linalg_complexdouble_t *) q->elements; for (int j = 0; j < n; j++) { cblas_zcopy(m, &aelems[j * m], 1, &qelems[j * m], 1); } #ifdef MORPHO_LINALG_USE_LAPACKE - info = LAPACKE_zungqr(LAPACK_COL_MAJOR, m, minmn, minmn, (__LAPACK_double_complex *) q->elements, m, tau); + info = LAPACKE_zungqr(LAPACK_COL_MAJOR, m, minmn, minmn, (linalg_complexdouble_t *) q->elements, m, tau); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); #else lwork = lwork_geqrf; - zungqr_(&m, &minmn, &minmn, (__LAPACK_double_complex *) q->elements, &m, tau, work, &lwork, &info); + zungqr_(&m, &minmn, &minmn, (linalg_complexdouble_t *) q->elements, &m, tau, work, &lwork, &info); if (info != 0) return (info > 0 ? LINALGERR_OP_FAILED : LINALGERR_LAPACK_INVLD_ARGS); #endif // If Q should be m×m, zero out remaining columns if m > minmn - if (m > minmn) memset(&q->elements[minmn * m * q->nvals], 0, (m - minmn) * m * sizeof(__LAPACK_double_complex)); + if (m > minmn) memset(&q->elements[minmn * m * q->nvals], 0, (m - minmn) * m * sizeof(linalg_complexdouble_t)); } return LINALGERR_OK; @@ -248,7 +251,7 @@ linalgError_t complexmatrix_getelement(objectcomplexmatrix *matrix, MatrixIdx_t static linalgError_t _stridedcopy(objectmatrix *x, objectmatrix *y, int offset) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy((__LAPACK_int) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); + cblas_dcopy((linalg_int_t) x->ncols*x->nrows, x->elements+offset, x->nvals, y->elements, y->nvals); return LINALGERR_OK; } @@ -271,24 +274,24 @@ linalgError_t complexmatrix_mmul(MorphoComplex alpha, objectmatrix *a, objectmat cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a->nrows, b->ncols, a->ncols, - &alpha, (__LAPACK_double_complex *) a->elements, - a->nrows, (__LAPACK_double_complex *) b->elements, b->nrows, - &beta, (__LAPACK_double_complex *) c->elements, c->nrows); + &alpha, (linalg_complexdouble_t *) a->elements, + a->nrows, (linalg_complexdouble_t *) b->elements, b->nrows, + &beta, (linalg_complexdouble_t *) c->elements, c->nrows); return LINALGERR_OK; } /** Scales a matrix x <- scale * x >*/ void complematrix_scale(objectmatrix *a, MorphoComplex scale) { - cblas_zscal(a->nrows * a->ncols, (__LAPACK_double_complex *) &scale, (__LAPACK_double_complex *) a->elements, 1); + cblas_zscal(a->nrows * a->ncols, (linalg_complexdouble_t *) &scale, (linalg_complexdouble_t *) a->elements, 1); } /** Finds the Frobenius inner product of two complex matrices (a, b) = \sum_{i,j} conj(a)_ij * b_ij */ linalgError_t complexmatrix_inner(objectcomplexmatrix *a, objectcomplexmatrix *b, MorphoComplex *out) { if (!(a->ncols==b->ncols && a->nrows==b->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_zdotc_sub(a->nrows * a->ncols, (__LAPACK_double_complex *) a->elements, 1, - (__LAPACK_double_complex *) b->elements, 1, - (__LAPACK_double_complex *) out); + cblas_zdotc_sub(a->nrows * a->ncols, (linalg_complexdouble_t *) a->elements, 1, + (linalg_complexdouble_t *) b->elements, 1, + (linalg_complexdouble_t *) out); return LINALGERR_OK; } @@ -297,9 +300,9 @@ linalgError_t complexmatrix_r1update(MorphoComplex alpha, objectcomplexmatrix *a MatrixIdx_t m=a->nrows*a->ncols, n=b->nrows*b->ncols; if (!(m==c->nrows && n==c->ncols)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_zgeru(CblasColMajor, m, n, (__LAPACK_double_complex *) &alpha, (__LAPACK_double_complex *) a->elements, 1, - (__LAPACK_double_complex *) b->elements, 1, - (__LAPACK_double_complex *) c->elements, c->nrows); + cblas_zgeru(CblasColMajor, m, n, (linalg_complexdouble_t *) &alpha, (linalg_complexdouble_t *) a->elements, 1, + (linalg_complexdouble_t *) b->elements, 1, + (linalg_complexdouble_t *) c->elements, c->nrows); return LINALGERR_OK; } @@ -307,7 +310,7 @@ linalgError_t complexmatrix_r1update(MorphoComplex alpha, objectcomplexmatrix *a linalgError_t complexmatrix_trace(objectcomplexmatrix *a, MorphoComplex *out) { if (a->nrows!=a->ncols) return LINALGERR_NOT_SQUARE; MorphoComplex one = MCBuild(1.0, 0.0); - cblas_zdotu_sub(a->nrows, (__LAPACK_double_complex *) a->elements, a->ncols+1, (__LAPACK_double_complex *) &one, 0, (__LAPACK_double_complex *) out); + cblas_zdotu_sub(a->nrows, (linalg_complexdouble_t *) a->elements, a->ncols+1, (linalg_complexdouble_t *) &one, 0, (linalg_complexdouble_t *) out); return LINALGERR_OK; } @@ -319,17 +322,17 @@ linalgError_t complexmatrix_inverse(objectcomplexmatrix *a) { int pivot[nrows]; #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgetrf(LAPACK_COL_MAJOR, nrows, ncols, a->elements, nrows, pivot); + info=LAPACKE_zgetrf(LAPACK_COL_MAJOR, nrows, ncols, (linalg_complexdouble_t *) a->elements, nrows, pivot); #else - zgetrf_(&nrows, &ncols, (__LAPACK_double_complex *) a->elements, &nrows, pivot, &info); + zgetrf_(&nrows, &ncols, (linalg_complexdouble_t *) a->elements, &nrows, pivot, &info); #endif if (info!=0) return (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS); #ifdef MORPHO_LINALG_USE_LAPACKE - info=LAPACKE_zgetri(LAPACK_COL_MAJOR, nrows, a->elements, nrows, pivot); + info=LAPACKE_zgetri(LAPACK_COL_MAJOR, nrows, (linalg_complexdouble_t *) a->elements, nrows, pivot); #else - int lwork=nrows*ncols; __LAPACK_double_complex work[nrows*ncols]; - zgetri_(&nrows, (__LAPACK_double_complex *) a->elements, &nrows, pivot, work, &lwork, &info); + int lwork=nrows*ncols; linalg_complexdouble_t work[nrows*ncols]; + zgetri_(&nrows, (linalg_complexdouble_t *) a->elements, &nrows, pivot, work, &lwork, &info); #endif return (info==0 ? LINALGERR_OK : (info>0 ? LINALGERR_MATRIX_SINGULAR : LINALGERR_LAPACK_INVLD_ARGS)); diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index acdabae8..044927e0 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -155,6 +155,7 @@ static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmat int minmn = (m < n) ? m : n; #ifdef MORPHO_LINALG_USE_LAPACKE + double* superb = malloc(minmn * sizeof(double)); info = LAPACKE_dgesvd(LAPACK_COL_MAJOR, (u ? 'A' : 'N'), // jobu: 'A' = all U columns, 'N' = no U (vt ? 'A' : 'N'), // jobvt: 'A' = all VT rows, 'N' = no VT @@ -162,7 +163,8 @@ static linalgError_t _svd(objectmatrix *a, double *s, objectmatrix *u, objectmat a->elements, m, // input matrix A (overwritten) s, // singular values (min(m,n)) (u ? u->elements : NULL), m, // U matrix (m×m) - (vt ? vt->elements : NULL), n // VT matrix (n×n) + (vt ? vt->elements : NULL), n, // VT matrix (n×n) + superb ); #else int lwork = -1; @@ -286,7 +288,7 @@ objectmatrix *matrix_new(MatrixIdx_t nrows, MatrixIdx_t ncols, bool zero) { objectmatrix *matrix_clone(objectmatrix *in) { objectmatrix *new = matrix_newwithtype(in->obj.type, in->nrows, in->ncols, in->nvals, false); - if (new) cblas_dcopy((__LAPACK_int) in->nels, in->elements, 1, new->elements, 1); + if (new) cblas_dcopy((linalg_int_t) in->nels, in->elements, 1, new->elements, 1); return new; } @@ -420,7 +422,7 @@ linalgError_t matrix_getcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b MatrixIdx_t col_idx = col; LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy((__LAPACK_int) b->nels, a->elements+a->nvals*col_idx*a->nrows, 1, b->elements, 1); + cblas_dcopy((linalg_int_t) b->nels, a->elements+a->nvals*col_idx*a->nrows, 1, b->elements, 1); return LINALGERR_OK; } @@ -429,7 +431,7 @@ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b MatrixIdx_t col_idx = col; LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); if (b->nels!=a->nrows*a->nvals) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy((__LAPACK_int) b->nels, b->elements, 1, a->elements+a->nvals*col_idx*a->nrows, 1); + cblas_dcopy((linalg_int_t) b->nels, b->elements, 1, a->elements+a->nvals*col_idx*a->nrows, 1); return LINALGERR_OK; } @@ -437,7 +439,7 @@ linalgError_t matrix_setcolumn(objectmatrix *a, MatrixIdx_t col, objectmatrix *b linalgError_t matrix_setcolumnptr(objectmatrix *a, MatrixIdx_t col, double *b) { MatrixIdx_t col_idx = col; LINALG_ERRCHECKRETURN(matrix_validateindex(&col_idx, a->ncols)); - cblas_dcopy((__LAPACK_int) a->nrows*a->nvals, b, 1, a->elements+a->nvals*col_idx*a->nrows, 1); + cblas_dcopy((linalg_int_t) a->nrows*a->nvals, b, 1, a->elements+a->nvals*col_idx*a->nrows, 1); return LINALGERR_OK; } @@ -467,7 +469,7 @@ MatrixCount_t matrix_countdof(objectmatrix *a) { linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_daxpy((__LAPACK_int) x->nels, alpha, x->elements, 1, y->elements, 1); + cblas_daxpy((linalg_int_t) x->nels, alpha, x->elements, 1, y->elements, 1); return LINALGERR_OK; } @@ -475,7 +477,7 @@ linalgError_t matrix_axpy(double alpha, objectmatrix *x, objectmatrix *y) { linalgError_t matrix_copy(objectmatrix *x, objectmatrix *y) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - cblas_dcopy((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + cblas_dcopy((linalg_int_t) x->nels, x->elements, 1, y->elements, 1); return LINALGERR_OK; } @@ -496,7 +498,7 @@ linalgError_t matrix_copyat(objectmatrix *a, objectmatrix *out, int row0, int co /** Scales a matrix x <- scale * x >*/ void matrix_scale(objectmatrix *x, double scale) { - cblas_dscal((__LAPACK_int) x->nels, scale, x->elements, 1); + cblas_dscal((linalg_int_t) x->nels, scale, x->elements, 1); } /** Loads the zero matrix a <- 0 */ @@ -593,7 +595,7 @@ linalgError_t matrix_trace(objectmatrix *a, double *out) { linalgError_t matrix_inner(objectmatrix *x, objectmatrix *y, double *out) { if (!(x->ncols==y->ncols && x->nrows==y->nrows)) return LINALGERR_INCOMPATIBLE_DIM; - *out=cblas_ddot((__LAPACK_int) x->nels, x->elements, 1, y->elements, 1); + *out=cblas_ddot((linalg_int_t) x->nels, x->elements, 1, y->elements, 1); return LINALGERR_OK; } diff --git a/src/linalg/matrix.h b/src/linalg/matrix.h index 1445fa3c..d911825c 100644 --- a/src/linalg/matrix.h +++ b/src/linalg/matrix.h @@ -29,6 +29,14 @@ #define MATRIX_LAPACK_PRESENT #endif +#ifdef MORPHO_LINALG_USE_LAPACKE +typedef lapack_complex_double linalg_complexdouble_t; +typedef lapack_int linalg_int_t; +#else +typedef __LAPACK_double_complex linalg_complexdouble_t; +typedef __LAPACK_int linalg_int_t; +#endif + #include "cmplx.h" #include "list.h" diff --git a/src/support/platform.c b/src/support/platform.c index 35556abf..7aff7cda 100644 --- a/src/support/platform.c +++ b/src/support/platform.c @@ -10,6 +10,24 @@ * - APIs for using threads * - Functions that involve time */ +#define _GNU_SOURCE + +#ifdef _WIN32 + #include + #include +#else + #define _POSIX_C_SOURCE 199309L + #include + #include + #include + #include + #include + #include + #include + #include + #include +#endif + #include #include #include @@ -18,22 +36,6 @@ #include "platform.h" #include "error.h" -#ifdef _WIN32 -#include -#include -#else -#define _POSIX_C_SOURCE 199309L -#include -#include -#include -#include -#include -#include -#include -#include -#include -#endif - /* ********************************************************************** * Platform name * ********************************************************************** */ From dcfdf7cdc84b4fb4ebd9f01188a186dccd0e2780 Mon Sep 17 00:00:00 2001 From: T J Atherton Date: Mon, 26 Jan 2026 20:36:46 -0500 Subject: [PATCH 155/156] Revised boxing scheme Works on AArch64. --- src/builtin/builtin.c | 4 +- src/datastructures/value.h | 111 +++++++++++++++++++------------------ 2 files changed, 59 insertions(+), 56 deletions(-) diff --git a/src/builtin/builtin.c b/src/builtin/builtin.c index 313bc940..f1f85d74 100644 --- a/src/builtin/builtin.c +++ b/src/builtin/builtin.c @@ -453,12 +453,12 @@ void builtin_initialize(void) { builtin_setclasstable(&builtin_classtable); // Initialize core object types - objectstringtype=object_addtype(&objectstringdefn); objectclasstype=object_addtype(&objectclassdefn); + objectstringtype=object_addtype(&objectstringdefn); objectbuiltinfunctiontype=object_addtype(&objectbuiltinfunctiondefn); varray__sigparseinit(&sigparseworklist); - + /* Initialize builtin classes and functions */ instance_initialize(); // Must initialize first so that Object exists diff --git a/src/datastructures/value.h b/src/datastructures/value.h index 29dc1abd..b466fa31 100644 --- a/src/datastructures/value.h +++ b/src/datastructures/value.h @@ -9,6 +9,7 @@ #include #include +#include #include #include "build.h" @@ -23,10 +24,10 @@ typedef struct sobject object; /** Values are the basic data type in morpho: each variable declared with 'var' corresponds to one value. Values can contain the following types: - VALUE_NIL - nil - VALUE_INTEGER - 32 bit integer - VALUE_DOUBLE - - VALUE_BOOL - boolean type + VALUE_NIL - nil + VALUE_INTEGER - 32 bit integer + VALUE_DOUBLE - + VALUE_BOOL - boolean type VALUE_OBJECT - pointer to an object The implementation of a value is intentionally opaque and can be NAN boxed into a 64-bit double or left as a struct. This file therefore defines several kinds of macro to: @@ -41,92 +42,94 @@ typedef struct sobject object; typedef uint64_t value; /** Define macros that enable us to refer to various bits */ -#define SIGN_BIT ((uint64_t) 0x8000000000000000) -#define QNAN ((uint64_t) 0x7ffc000000000000) -#define LOWER_WORD ((uint64_t) 0x00000000ffffffff) +#define QNAN ((uint64_t) 0x7ff8000000000000ull) +#define LOWER_WORD ((uint64_t) 0x00000000ffffffffull) -/** Store the type in bits 47-49 */ -#define TAG_NIL (1ull<<47) // 001 -#define TAG_BOOL (2ull<<47) // 010 -#define TAG_INT (3ull<<47) // 011 -#define TAG_OBJ SIGN_BIT +/** Store the type in bits 48-50 */ +#define TAG_SHIFT 48 +#define TAG_MASK ((uint64_t) (0x7ull << TAG_SHIFT)) // bits 48..50 +#define PAYLOAD_MASK ((uint64_t) 0x0000ffffffffffffull) // bits 0..47 +#define EXP_MASK ((uint64_t) 0x7ff0000000000000ull) // Exponent bits + +#define TAG_NIL ((uint64_t) 1ull << TAG_SHIFT) +#define TAG_BOOL ((uint64_t) 2ull << TAG_SHIFT) +#define TAG_INT ((uint64_t) 3ull << TAG_SHIFT) +#define TAG_OBJ ((uint64_t) 4ull << TAG_SHIFT) + +/** Manipulations */ +#define MORPHO_EXPALLONES(v) ((((uint64_t)(v)) & EXP_MASK) == EXP_MASK) +#define MORPHO_TAGBITS(v) (((uint64_t)(v)) & TAG_MASK) /** Bool values are stored in the lowest bit */ #define TAG_TRUE 1 #define TAG_FALSE 0 -/** Bit mask used to select type bits */ -#define TYPE_BITS (TAG_OBJ | TAG_NIL | TAG_BOOL | TAG_INT) - /** Map VALUE_XXX macros to type bits */ #define VALUE_NIL (TAG_NIL) #define VALUE_INTEGER (TAG_INT) -#define VALUE_DOUBLE () +#define VALUE_DOUBLE ((uint64_t) 0ull) #define VALUE_BOOL (TAG_BOOL) #define VALUE_OBJECT (TAG_OBJ) /** Get the type from a value */ -#define MORPHO_GETTYPE(x) ((x) & TYPE_BITS) - -/** Union to enable conversion of a double to a 64 bit integer */ -typedef union { - uint64_t bits; - double num; -} doubleunion; +#define MORPHO_GETTYPE(x) (MORPHO_ISBOXED(x) ? MORPHO_TAGBITS(x) : VALUE_DOUBLE) -/** Converts a double to a value by type punning */ +/** Converts a double to a value */ static inline value doubletovalue(double num) { - doubleunion data; - data.num = num; - return data.bits; + value bits; + memcpy(&bits, &num, sizeof(bits)); + // If this is NaN or Inf (exp all ones), force tag bits to 0 so it is a genuine float NaN/Inf + if ((bits & EXP_MASK) == EXP_MASK) { + bits &= ~TAG_MASK; + } + return bits; } -/** Converts a value to a double by type punning */ +/** Converts a value to a double */ static inline double valuetodouble(value v) { - doubleunion data; - data.bits = v; - return data.num; + double num; + memcpy(&num, &v, sizeof(num)); + return num; } /** Create a literal */ -#define MORPHO_NIL ((value) (uint64_t) (QNAN | TAG_NIL)) -#define MORPHO_TRUE ((value) (uint64_t) (QNAN | TAG_BOOL | TAG_TRUE)) -#define MORPHO_FALSE ((value) (uint64_t) (QNAN | TAG_BOOL | TAG_FALSE)) +#define MORPHO_NIL ((value) (QNAN | TAG_NIL)) +#define MORPHO_TRUE ((value) (QNAN | TAG_BOOL | TAG_TRUE)) +#define MORPHO_FALSE ((value) (QNAN | TAG_BOOL | TAG_FALSE)) -#define MORPHO_INTEGER(x) ((((uint64_t) (x)) & LOWER_WORD) | QNAN | TAG_INT) +#define MORPHO_BOOL(x) ((x) ? MORPHO_TRUE : MORPHO_FALSE) +#define MORPHO_INTEGER(x) ((value) (QNAN | TAG_INT | (((uint64_t)(x)) & LOWER_WORD))) #define MORPHO_FLOAT(x) doubletovalue(x) -#define MORPHO_BOOL(x) ((x) ? MORPHO_TRUE : MORPHO_FALSE) -#define MORPHO_OBJECT(x) ((value) (TAG_OBJ | QNAN | (uint64_t)(uintptr_t)(x))) +#define MORPHO_OBJECT(x) ((value) (QNAN | TAG_OBJ | (((uint64_t)(uintptr_t)(x)) & PAYLOAD_MASK))) /** Test for the type of a value */ -#define MORPHO_ISNIL(v) ((v) == MORPHO_NIL) -#define MORPHO_ISINTEGER(v) (((v) & (QNAN | TYPE_BITS)) == (QNAN | TAG_INT)) -#define MORPHO_ISFLOAT(v) (((v) & QNAN) != QNAN) -#define MORPHO_ISBOOL(v) (((v) & (QNAN | TYPE_BITS)) == (QNAN | TAG_BOOL)) -#define MORPHO_ISOBJECT(v) \ - (((v) & (QNAN | TYPE_BITS))== (QNAN | TAG_OBJ)) +#define MORPHO_ISNIL(v) ((v) == MORPHO_NIL) +#define MORPHO_ISBOXED(v) (MORPHO_EXPALLONES(v) && (MORPHO_TAGBITS(v) != 0)) +#define MORPHO_ISINTEGER(v) (MORPHO_ISBOXED(v) && (MORPHO_TAGBITS(v) == TAG_INT)) +#define MORPHO_ISBOOL(v) (MORPHO_ISBOXED(v) && (MORPHO_TAGBITS(v) == TAG_BOOL)) +#define MORPHO_ISOBJECT(v) (MORPHO_ISBOXED(v) && (MORPHO_TAGBITS(v) == TAG_OBJ)) +#define MORPHO_ISFLOAT(v) (!MORPHO_ISBOXED(v)) /** Get a value */ -#define MORPHO_GETINTEGERVALUE(v) ((int) ((uint32_t) (v & LOWER_WORD))) +#define MORPHO_GETPAYLOAD(v) (((uint64_t)(v)) & PAYLOAD_MASK) +#define MORPHO_GETINTEGERVALUE(v) ((int32_t) ((uint32_t)((uint64_t)(v) & LOWER_WORD))) #define MORPHO_GETFLOATVALUE(v) valuetodouble(v) #define MORPHO_GETBOOLVALUE(v) ((v) == MORPHO_TRUE) -#define MORPHO_GETOBJECT(v) ((object *) (uintptr_t) ((v) & ~(TAG_OBJ | QNAN))) +#define MORPHO_GETOBJECT(v) ((object *)(uintptr_t)(((uint64_t)(v)) & PAYLOAD_MASK)) static inline bool morpho_ofsametype(value a, value b) { - if (MORPHO_ISFLOAT(a) || MORPHO_ISFLOAT(b)) { - return MORPHO_ISFLOAT(a) && MORPHO_ISFLOAT(b); - } else { - if ((a & TYPE_BITS)==(b & TYPE_BITS)) { - return true; - } - } + bool af = MORPHO_ISFLOAT(a); + bool bf = MORPHO_ISFLOAT(b); + + if (af || bf) return (af && bf); - return false; + /* both are boxed: compare tag field only */ + return ((a & TAG_MASK) == (b & TAG_MASK)); } /** Get a non-object's type field as an integer */ static inline int _getorderedtype(value x) { - return (MORPHO_ISFLOAT(x) ? 0 : (((x) & TYPE_BITS)>>47) & 0x7); + return MORPHO_ISFLOAT(x) ? 0 : (int)(((uint64_t)x & TAG_MASK) >> TAG_SHIFT); } #define MORPHO_GETORDEREDTYPE(x) _getorderedtype(x) From 0255436e0f8d8f52d253872ba7796691c1a1deff Mon Sep 17 00:00:00 2001 From: T J Atherton Date: Mon, 26 Jan 2026 21:13:16 -0500 Subject: [PATCH 156/156] Fix issues with QR decomposition --- src/linalg/complexmatrix.c | 2 +- src/linalg/matrix.c | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/linalg/complexmatrix.c b/src/linalg/complexmatrix.c index 9d63416c..a773dd80 100644 --- a/src/linalg/complexmatrix.c +++ b/src/linalg/complexmatrix.c @@ -177,7 +177,7 @@ static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { // ZGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns linalg_complexdouble_t *aelems = (linalg_complexdouble_t *) a->elements; linalg_complexdouble_t *qelems = (linalg_complexdouble_t *) q->elements; - for (int j = 0; j < n; j++) { + for (int j = 0; j < minmn; j++) { cblas_zcopy(m, &aelems[j * m], 1, &qelems[j * m], 1); } diff --git a/src/linalg/matrix.c b/src/linalg/matrix.c index 044927e0..557e6584 100644 --- a/src/linalg/matrix.c +++ b/src/linalg/matrix.c @@ -223,7 +223,7 @@ static linalgError_t _qr(objectmatrix *a, objectmatrix *q, objectmatrix *r) { if (q) { // Copy reflectors from a to q (only first n columns, since a is m×n and q is m×m) // DGEQRF stores reflectors in lower triangle and R in upper triangle of first n columns - for (int j = 0; j < n; j++) cblas_dcopy(m, &a->elements[j * m], 1, &q->elements[j * m], 1); + for (int j = 0; j < minmn; j++) cblas_dcopy(m, &a->elements[j * m], 1, &q->elements[j * m], 1); #ifdef MORPHO_LINALG_USE_LAPACKE info = LAPACKE_dorgqr(LAPACK_COL_MAJOR, m, minmn, minmn, q->elements, m, tau);