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core_agent.py
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177 lines (148 loc) · 7.55 KB
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import pandas as pd
import google.generativeai as genai
import os
import json
from kb_preprocess import PreprocessorKB
from kb_statistical import StatisticalKnowledgeBase
from preprocess_agent import PreprocessorAgent
from preprocess_critique import PreprocessorCritique
from uni_agent import UnivariateAnalyzer
from uni_critique import UniCritique
from bi_selector import BivariateSelectorAgent
from bi_agent import BivariateAnalyzer
from bi_critique import BiCritique
import type_detector
from dotenv import load_dotenv
load_dotenv()
UPLOAD_DIR = "uploads"
class CoreAgent:
def __init__(self):
self.stat_kb = StatisticalKnowledgeBase(persist_dir='stat_kb_dir')
self.preprocess_kb = PreprocessorKB(persist_dir='preprocess_kb_dir')
def analyse_dataset(self, file_path: str, file_name, data_context: str):
self.data_context = data_context
self.file_path = file_path
self.file_name = os.path.splitext(file_name)[0]
self.dataset = pd.read_csv(file_path)
self.dataset_pre = None
self.stat_kb.load_knowledge('uni_bi_kb.json')
self.preprocess_kb.load_knowledge('preprocess_kb.json')
self.column_data_type = type_detector.detect_datatypes(self.dataset)
print("\ntype detector: ", self.column_data_type)
self.data_preprocessing(self.dataset, data_context)
self.univariate_analysis()
self.bivariate_analysis()
print("\n\nANALYSIS DONE. SENDING TO QUERY AGENT\n\n")
self.combine_result()
return self.result_output_path, self.selected_data_types, self.selected_pairs
def data_preprocessing(self, dataset: pd.DataFrame, data_context: str):
print("\nSTART_PREPROECSSING")
preprocess_agent = PreprocessorAgent(self.preprocess_kb)
self.metadata = preprocess_agent.metadata_generator(self.column_data_type, data_context)
self.selected_data_types = preprocess_agent.feature_remover(self.column_data_type, self.metadata, data_context)
self.outlier_result = {}
self.dataset_pre = pd.DataFrame()
self.selected_data_types = {
col: dtype for col, dtype in self.selected_data_types.items()
if dataset[col].isnull().mean() <= 0.3
}
print("\nSelected columns: ", self.selected_data_types)
for column, col_type in self.selected_data_types.items():
preprocess_agent.fetch_knowledge(col_type)
out_result = preprocess_agent.outlier_detector(data_column=dataset[column], data_type=col_type, metadata=self.metadata[column])
self.outlier_result[column] = out_result
if dataset[column].isnull().any():
miss_val_result = preprocess_agent.missing_value_imputer(data_column=dataset[column], data_type=col_type, metadata=self.metadata[column])
if "imputed_data" in miss_val_result:
self.dataset_pre[column] = miss_val_result["imputed_data"]
else:
self.dataset_pre[column] = dataset[column]
else:
self.dataset_pre[column] = dataset[column]
print(f"No missing values in column: {column}")
self.processed_file_path = os.path.join(UPLOAD_DIR, f"{self.file_name}_pre.csv")
self.dataset_pre.to_csv(self.processed_file_path, index=False)
print("\noutlier_result: \n", self.outlier_result)
preprocess_critique = PreprocessorCritique(self.file_path, self.processed_file_path, self.selected_data_types)
self.distribution_result = preprocess_critique.compare_distribution()
print("\nPreprocess Critique Result: \n", self.distribution_result)
print("\nEND_PREPROECSSING")
def univariate_analysis(self):
print("\nSTART UNIVARIATE\n")
uni_analyser = UnivariateAnalyzer(self.stat_kb)
# uni_critique = UniCritique(self.stat_kb)
self.uni_desc_result = {}
self.uni_visual_result = {}
self.uni_inferential_result = {}
for col, col_type in self.selected_data_types.items():
desc_result, vis_result, inf_result = uni_analyser.analyze(self.dataset_pre[col], col_type, self.metadata[col], col)
# desc_result, vis_result, inf_result= uni_critique.validate(self.dataset_pre[col],col_type, self.metadata[col], col, desc_result, vis_result, inf_result)
self.uni_desc_result[col] = desc_result
self.uni_visual_result[col] = vis_result
self.uni_inferential_result[col] = inf_result
print("\nUNI DESC RESULT: ")
for k, v in self.uni_desc_result.items():
print(k, " : ", v)
print("\nUNI VISUAL RESULT: ")
for k, v in self.uni_visual_result.items():
print(k, " : ", v)
print("\nUNI INF RESULT: ")
for k, v in self.uni_inferential_result.items():
print(k, " : ", v)
print("\nEND UNIVARIATE\n")
def bivariate_analysis(self):
print("\nSTART BIVARIATE\n")
bi_selector = BivariateSelectorAgent(self.selected_data_types)
bi_analyser = BivariateAnalyzer(self.stat_kb)
# bi_critique = BiCritique(self.stat_kb)
self.selected_pairs = bi_selector.select_bivariate_pairs(self.processed_file_path, self.data_context)
print("\nSelected pairs: ", self.selected_pairs)
self.bi_desc_result = {}
self.bi_visual_result = {}
self.bi_inferential_result = {}
for temp in self.selected_pairs:
col1 = temp['pair'][0]
col2 = temp['pair'][1]
desc_result, vis_result, inf_result = bi_analyser.analyze(
self.dataset_pre[col1], self.selected_data_types[col1], col1, self.metadata[col1],
self.dataset_pre[col2], self.selected_data_types[col2], col2, self.metadata[col2],
)
# desc_result, vis_result, inf_result = bi_critique.validate(
# self.dataset_pre[col1], self.selected_data_types[col1], self.metadata[col1], col1,
# self.dataset_pre[col2], self.selected_data_types[col2], self.metadata[col2], col2,
# desc_result, vis_result, inf_result
# )
combine = col1 + "-" + col2
self.bi_desc_result[combine] = desc_result
self.bi_visual_result[combine] = vis_result
self.bi_inferential_result[combine] = inf_result
print("\nBI DESC RESULT: ")
for k, v in self.bi_desc_result.items():
print(k, " : ", v)
print("\nBI VISUAL RESULT: ")
for k, v in self.bi_visual_result.items():
print(k, " : ", v)
print("\nBI INF RESULT: ")
for k, v in self.bi_inferential_result.items():
print(k, " : ", v)
print("\nEND BIVARIATE\n")
def combine_result(self):
combined_dict = {
"preprocessing": {
"outlier_result": self.outlier_result,
"distribution_result": self.distribution_result
},
"univariate": {
"descriptive": self.uni_desc_result,
"visual": self.uni_visual_result,
"inferential": self.uni_inferential_result
},
"bivariate": {
"descriptive": self.bi_desc_result,
"visual": self.bi_visual_result,
"inferential": self.bi_inferential_result
}
}
self.result_output_path = os.path.join(UPLOAD_DIR, f"{self.file_name}_result.json")
with open(self.result_output_path, "w", encoding="utf-8") as f:
json.dump(combined_dict, f, indent=2)