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Description
Is your feature request related to a problem? Please describe.
In a notebook you are likely to repeat certain steps multiple times. For example, build_model, there should be a solution for this that generates a new AutoPeptideML object that inherits all calculations already made, but that it saves the information into a new folder. Clear indication to the user of the new folder should be provided.
Describe the solution you'd like
Unsure. The following methods should be considered:
AutoPeptideML._hpoAutoPeptideML._representingAutoPeptideML._partitioningAutoPeptideML._evaluating
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