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@sakurita17 is working with @hannesbecher on adding support for genomic data by leveraging the Colleau's indirect method for Hx https://gsejournal.biomedcentral.com/articles/10.1186/s12711-017-0363-9
We will call this rhpca which will stand for randomised hybrid PCA, hyrbrid as in combination of pedigree and genomic data.
Some tasks
- implement
rhpcaas a new function - document the function
- unit test the function
- test the functionality with large simulation (from NrfTwin/GenoSim)
- write a vignette with a simple example
- enable work with metafounders (will open a new issue for this as it will need some additional work - see Enable work with metafounders #35)
- find an efficient way with large genotype datasets (this will also be punted to a later stage - see Find an efficient way with large genotype datasets for rhpca #36)
Anything more?
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