From b64978d04abb7ea7a4bc54f47cd35de4748efb50 Mon Sep 17 00:00:00 2001
From: Nishita Paruchuri <nishitaparuchuri@macbookair.mynetworksettings.com>
Date: Sun, 2 Mar 2025 22:41:49 -0500
Subject: [PATCH] Fixed error in S3segmenter

---
 S3segmenter.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/S3segmenter.py b/S3segmenter.py
index 351eb3a..a8c98df 100644
--- a/S3segmenter.py
+++ b/S3segmenter.py
@@ -115,7 +115,6 @@ def S3AreaSegmenter(nucleiPM, images, TMAmask, threshold,fileprefix,outputPath):
             threshold = threshold_otsu(image_gauss)
         mask=resize(image_gauss>threshold,(images.shape[1],images.shape[2]),order = 0)*TMAmask
         area.append(np.sum(np.sum(mask)))
-    os.mk    
     np.savetxt(outputPath + os.path.sep + fileprefix + '_area.csv',(np.transpose(np.asarray(area))),fmt='%10.5f')  
     return TMAmask