diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md index 1ec0b67f..363ed3ae 100644 --- a/.github/CONTRIBUTING.md +++ b/.github/CONTRIBUTING.md @@ -8,17 +8,19 @@ and feedback from users. wish to contribute to GITM. Following these guidelines will ensure a positive experience for all involved. -## Outline - -- [Opening an Issue](#opening-an-issue) - - [Bug Report](#bug-report) - - [Feature Requests](#feature-requests) -- [Pull Requests](#pull-requests) - - [Committing Changes](#committing-changes) - - [Commit Styling](#commit-styling) -- [Code Formatting](#code-formatting) - - [Automatic/Validating Code Formatting](#automaticvalidating-code-formatting) - - [Style Guidelines \& `.fprettify.rc`](#style-guidelines--fprettifyrc) +- [Contributing Guidelines](#contributing-guidelines) + - [Opening an Issue](#opening-an-issue) + - [Bug Report](#bug-report) + - [Feature Requests](#feature-requests) + - [Pull Requests](#pull-requests) + - [Committing Changes](#committing-changes) + - [Commit Styling](#commit-styling) + - [Testing GITM](#testing-gitm) + - [Code Formatting](#code-formatting) + - [Automatic/Validating Code Formatting](#automaticvalidating-code-formatting) + - [Style Guidelines \& `.fprettify.rc`](#style-guidelines--fprettifyrc) + +--- ## Opening an Issue @@ -30,15 +32,15 @@ are creating and then modify the contents of the template to describe your issue ### Bug Report -If you notice a problkem with GITM and are unsure of how to fix it yourself, please +If you notice a problem with GITM and are unsure of how to fix it yourself, please create a bug report detailing the problem. The template has several optional sections, so read through them all before adding information to the wrong section. - **Do not open an issue for problems installing GITM on a specific system.** Since there is no way to predict all possible systems which GITM will be used on, details on specific systems cannot be provided. Try the steps in the [README](../README.md) first, -then reach out to #TODO if you need mroe help. -- Please include enough information to allow a maintainer to reproduce your bug +then reach out to the development team if you need more help. +- Please include enough information to allow a maintainer to reproduce your bug, only seeing the information in the bug report. Forgetting to attach input files or only saying "the code did not run on system X", for example, will result in a delay. - Check if another issue is open (or closed) with the same problem. Duplicate issues @@ -78,7 +80,7 @@ are working on a feature and notice an unrelated bug or typo, create a new branc `develop`, fix it, and submit the pull request separately. There is no harm in submitting many small pull requests! - **Document your changes**. If you are introducing a new feature, please include -a description of it and its uses in both the documentation (`docs/` folder) and +a description of it and its uses in both the documentation (`srcDoc/` folder) and in comments within the code. - **Include new tests**. If you are adding a new feature, please add a sample `UAM.in` file with this option enabled in the `srcTests/auto_test/` folder. We do not want future updates @@ -134,6 +136,19 @@ FEAT: Hydrostatic density implementation. Implemented hydrostatic density. (feature) ``` +## Testing GITM + +GITM has a number of tests that are maintained and run automatically on every +release & pull-request. To run these yourself, run the script `run_all_tests.sh` +from within `srcTests/auto_test`. New tests can be added by simply creating +another UAM.in file, and will be run automatically if the file matches the +pattern `UAM.in.*.test`. + +It is best practice to create tests as bugs are fixed. For example, if running +GITM in a certain configuration causes a crash, it is recommended to create a +test with this configuration which will help ensure the bug does not sneak back +in with future development. + ## Code Formatting GITM now uses a custom implementation of the diff --git a/.github/workflows/Format-Doc-Test.yml b/.github/workflows/Format-and-Test.yml similarity index 78% rename from .github/workflows/Format-Doc-Test.yml rename to .github/workflows/Format-and-Test.yml index d0ea04b9..0a5e5b5e 100644 --- a/.github/workflows/Format-Doc-Test.yml +++ b/.github/workflows/Format-and-Test.yml @@ -48,34 +48,13 @@ jobs: cd GITM python srcPython/format_GITM.py -l -s -v ${ALL_CHANGED_FILES} - Documentation: - runs-on: ubuntu-latest - name: Build Documentation - needs: [Format] - steps: - - name: Clone GITM repository - uses: actions/checkout@v4 - - name: Compile LaTeX document - uses: xu-cheng/latex-action@v3 - with: - root_file: manual.tex - working_directory: srcDoc - - name: Rename GITM Manual - run: mv srcDoc/manual.pdf GITM_manual.pdf - - name: Upload PDF file - uses: actions/upload-artifact@v4 - with: - name: PDF - path: GITM_manual.pdf - retention-days: 31 - Tests: runs-on: ${{ matrix.os }} strategy: matrix: os: [ubuntu-latest, macos-latest] name: Run Automatic Tests - needs: [Format, Documentation] + needs: [Format] steps: - name: Linux install gfortran & openmpi if: runner.os == 'Linux' @@ -85,6 +64,7 @@ jobs: run: | brew update brew install gcc open-mpi + ln -s $(brew --prefix)/bin/gfortran-15 $(brew --prefix)/bin/gfortran - name: Clone GITM repository uses: actions/checkout@v4 - name: Run tests on MacOS (no output checking, only one test) diff --git a/.github/workflows/build-docs.yml b/.github/workflows/build-docs.yml deleted file mode 100644 index 4cb9ef5b..00000000 --- a/.github/workflows/build-docs.yml +++ /dev/null @@ -1,29 +0,0 @@ -name: Build Documentation - -on: - schedule: - # 0 minute, 0 hour, 1st day, every month, any day of week - - cron: '0 0 1 * *' - push: - branches: - main - -jobs: - build_documentation: - runs-on: ubuntu-latest - steps: - - name: Clone GITM repository - uses: actions/checkout@v4 - - name: Compile LaTeX document - uses: xu-cheng/latex-action@v3 - with: - root_file: manual.tex - working_directory: srcDoc - - name: Rename GITM Manual - run: mv srcDoc/manual.pdf GITM_manual.pdf - - name: Upload PDF file - uses: actions/upload-artifact@v4 - with: - name: PDF - path: GITM_manual.pdf - retention-days: 31 diff --git a/.gitignore b/.gitignore index 3941664d..a77757fe 100644 --- a/.gitignore +++ b/.gitignore @@ -61,4 +61,5 @@ ext/ share/component_share util/component_util -src/.version \ No newline at end of file +src/.version +gitstatus.txt \ No newline at end of file diff --git a/.readthedocs.yaml b/.readthedocs.yaml new file mode 100644 index 00000000..1e4ab3eb --- /dev/null +++ b/.readthedocs.yaml @@ -0,0 +1,15 @@ +version: 2 + +# Set the version of Python and other tools you might need +build: + os: ubuntu-24.04 + tools: + python: "3.12" + +mkdocs: + configuration: mkdocs.yml + +# Optionally declare the Python requirements required to build your docs +python: + install: + - requirements: srcDoc/requirements.txt diff --git a/Makefile b/Makefile index 82f4124b..029597bc 100644 --- a/Makefile +++ b/Makefile @@ -37,9 +37,7 @@ NOMPI: @cd ${NOMPIDIR}; make LIB VERSION: - printf 'character(25), parameter :: GitmVersion = "%s.%s"\n' \ - "$$(git log -1 --date=format:'%Y%m%d' --pretty='format:%ad')" \ - "$$(git status --porcelain | grep -v '^??' | wc -l | cut -f1 -d' ')" > src/.version + ./share/Scripts/Makeversion.sh @echo GITM: @@ -87,6 +85,7 @@ clean: if [ -d util ]; then cd util; make --no-print-directory cleanall; fi; if [ -d srcSAMI ]; then cd srcSAMI; make --no-print-directory clean; fi; if [ -d $(EIEDIR) ]; then cd $(EIEDIR); make --no-print-directory cleanall; fi; + if [ -f src/.version ]; then rm src/.version; fi distclean: diff --git a/README.md b/README.md index 018a1588..21d02535 100644 --- a/README.md +++ b/README.md @@ -5,9 +5,9 @@ This is the home of the Global Ionosphere/Thermosphere Model (GITM). GITM has been developed in fortran-90. It has been tested with gfortran on Linux and MacOS as well as ifort on NASA's Pleiades computer. -The latest version of the documentation can be accessed at: +For the complete documentation, see [GITM's Read the Docs Page](https://gitm.readthedocs.io). -[![Build Documentation](https://github.com/GITMCode/GITM/actions/workflows/build-docs.yml/badge.svg)](https://github.com/GITMCode/GITM/actions/workflows/build-docs.yml) +---
GITM's default branch recently changed names. To access the latest features, please update your local refs. @@ -29,38 +29,38 @@ git remote prune origin
-## Dependencies - -1. GITM needs MPI to work. - ## Quick Start +> GITM needs MPI to work properly. This can be installed with your system's package manager, or loaded as a `module` on an HPC system. +> See [the installation guide](https://gitm.readthedocs.io/en/latest/quick_start/#requirements) for more information. + 1\. Clone the repository and cd into the repo folder ```shell -git clone --recursive https://github.com/GITMCode/GITM +git clone git@github.com:GITMCode/GITM.git ``` +Substitute the URL with the `https` link from the "Code" button above if you do not have SSH keys set up. + 2\. Go into the repo directory ```shell cd GITM ``` -3\. Configure the Fortran compiler (version 10) +3\. Configure the Fortran compiler and download external electrodynamics library +(gfortran versions 10+) ```shell ./Config.pl -install -earth -compiler=gfortran10 ``` The biggest issue with the above command is that it assumes that you -have the gfortran (version 10) compiler and things like mpif90 work +have the gfortran (version 10+) compiler and things like mpif90 work ok. If you don't have gfortran and mpif90, then you need to get these things for your computer. If you have version 9 or before for gfortran, you can do: -3b\. Configure the Fortran compiler (version 9 or below) - ```shell ./Config.pl -install -earth -compiler=gfortran ``` @@ -69,17 +69,15 @@ In theory, Mars, Venus, Titan, and LV-426 should work. These are in various states of completion, so I wouldn't count on them being perfect. -If running on Pleiades (as of March 3, 2022), you need to have these +If running on Pleiades, you need to have these in your start-up script (.cshrc, .bashrc, etc): ``` -module load comp-intel/2016.2.181 -module load mpi-hpe/mpt +module load comp-intel +module load mpi-hpe ``` -And you can use 3c below to configure the code. - -3c\. Configure for Pleiades +And you can use the below line below to configure the code: ```shell ./Config.pl -install -earth -compiler=ifort @@ -127,7 +125,7 @@ lon. See below for how to set the resolution. > see available options. > The legacy postprocessors are still available, but are not built by default. To build -> PostProcess.exe, run `make POST` and the csh script can be found at `src/pGITM`. +> PostProcess.exe, run `make POST`. The csh script can be found at `src/pGITM`. 9\. Go into the output directory: @@ -200,7 +198,9 @@ team. For example: NCAR. The IGRF code that comes with it is also not developed at UM. 2. Many electrodynamics models (Weimer, Newell's Ovation Prime, -Mitchell's Ovation SME, others in the util/EMPIRICAL/srcIE directory). +Mitchell's Ovation SME, others in the +[GITMCode/Electrodynamics](https://github.com/GITMCode/Electrodynamics) +repository). 3. MSIS and IRI, which are in util/EMPIRICAL/srcUA. MSIS is used as a lower BC at Earth and was developed at NRL. IRI is used to initialize @@ -228,3 +228,7 @@ processors, you can change the parameters in `src/ModSize.f90` and adjust the number of cells in each block to compensate. For example, you have 8 processors, so you can adjust `src/ModSize.f90` to have 18 cells in lat and lon, then ask for 2 (lat) x 4 (lon) blocks to get 5 deg x 5 deg resolution. + +See the +[grid page](https://gitm.readthedocs.io/en/latest/grid/#horizontal-resolution) +in the documentation for more details and some examples. diff --git a/mkdocs.yml b/mkdocs.yml new file mode 100644 index 00000000..3636d51f --- /dev/null +++ b/mkdocs.yml @@ -0,0 +1,90 @@ +site_name: GITM +site_url: https://gitm.readthedocs.io +site_description: >- + Official documentation for the Global Ionosphere Thermosphere Model (GITM) +repo_name: GITMCode/GITM +repo_url: https://github.com/GITMCode/GITM + +theme: + # name: readthedocs + # name: mkdocs + name: material + icon: + logo: material/earth + repo: material/github + + features: + - navigation.tabs + - navigation.tabs.sticky + - navigation.footer + - toc.integrate + - content.code.annotate + - content.code.copy + + palette: + # Palette toggle for automatic mode + - media: "(prefers-color-scheme)" + toggle: + icon: material/brightness-auto + name: Switch to light mode + + # Palette toggle for light mode + - media: "(prefers-color-scheme: light)" + scheme: default + toggle: + icon: material/brightness-7 + name: Switch to dark mode + + # Palette toggle for dark mode + - media: "(prefers-color-scheme: dark)" + scheme: slate + toggle: + icon: material/brightness-4 + name: Switch to system preference + +plugins: + - search # allow for search after being built + - mermaid2: # cool diagrams + javascript: js/mermaid.min.js # local path to mermaid javascript file + +markdown_extensions: + - pymdownx.extra #footnotes, abbreviations, tables, definitions, etc. + - pymdownx.fancylists # lists continuing after breaking for indentation + - pymdownx.saneheaders #allows for "#text" to not be parsed as a header + - pymdownx.tasklist + - markdown_katex # math + - admonition # note, warning, etc. blocks + - markdown_del_ins # strike-through & insert + - markdown_captions # figure captions. + - pymdownx.superfences: + # make exceptions to highlighting of code: + custom_fences: + - name: mermaid + class: mermaid + format: !!python/name:mermaid2.fence_mermaid + +docs_dir: srcDoc + +nav: + - Home: index.md + - Getting Started: install.md + - Inputs: + - Common Inputs: common_inputs.md + - All Inputs: set_inputs.md + - Outputs: + - Postprocessing: postprocessing.md + - Available Outputs: outputs.md + - Plotting Outputs: plotters.md + - Internals: + - Overview: internals/overview.md + - Grid: internals/grid.md + - Earth Chemistry: internals/chemistry.md + - Electrodynamics: internals/electrodynamics.md + - Development: + - Site Information: devstuff/devhome.md + - Contributing: https://github.com/GITMCode/GITM/blob/main/.github/CONTRIBUTING.md + - GITM Developers: https://github.com/GITMCode/GITM/graphs/contributors + - Markdown Reference: devstuff/markdown_ref.md + - GITM Outline: devstuff/outline.md + - Other Useful Links: devstuff/somelinks.md + - Getting Help: FAQ/faq.md diff --git a/share/Scripts/Makeversion.sh b/share/Scripts/Makeversion.sh new file mode 100755 index 00000000..8fde3ecd --- /dev/null +++ b/share/Scripts/Makeversion.sh @@ -0,0 +1,76 @@ +#!/bin/bash + +# This file writes some 'version' info about GITM to a file +# The file is located in src/.version and is compiled into GITM. +# This info is then written out to run_information.txt. + +## Function we call if .git folder exists, and $(git status) has changed from last time +writegitversion(){ + # This is the float-type version placed in output files + # Format is (date of last commit).(# of files changed from HEAD) + printf 'character(25), parameter :: GitmVersion = & \n "%s.%s"\n' \ + "$(git log -1 --date=format:'%Y%m%d' --pretty='format:%ad')" \ + "$(git status --porcelain | grep -v '^??' | wc -l | cut -f1 -d' ')" > src/.version + + + # The "GitmVersionFull" variable has info about the last commit hash in addition to above + printf '\ncharacter(50), parameter :: GitmVersionFull = "%s_%s.%s"\n\n' \ + "$(git rev-parse --abbrev-ref HEAD)" \ + "$(git log -1 --date=format:'%Y%m%d' --pretty='format:%h-%ad')" \ + "$(git status --porcelain | grep -v '^??' | wc -l | cut -f1 -d' ')" >> src/.version + + # Same as above, but for Electrodynamics + printf '\ncharacter(50), parameter :: ElectrodynamicsVersionFull = "%s_%s.%s"\n\n' \ + "$(git -C ext/Electrodynamics rev-parse --abbrev-ref HEAD)" \ + "$(git -C ext/Electrodynamics log -1 --date=format:'%Y%m%d' --pretty='format:%h-%ad')" \ + "$(git -C ext/Electrodynamics status --porcelain | grep -v '^??' | wc -l | cut -f1 -d' ')" \ + >> src/.version + + + # Here, for completeness, all of the changes files are listed. + printf 'character(*), parameter :: DifferentFilesGitm = &\n"' >> src/.version + + files=$(git status --porcelain | awk '{print $NF}') + for file in $files; do + echo "$file,&" >> src/.version + done + echo '"'>> src/.version + + printf 'character(*), parameter :: DifferentFilesElectrodyunamics = &\n"' >> src/.version + + files=$(git -C ext/Electrodynamics status --porcelain | awk '{print $NF}') + for file in $files; do + echo "$file,&" >> src/.version + done + echo '"'>> src/.version +} + +################ +## MAIN ## +################ + +if [ -d .git ]; then # Check if .git/ directory exists + + # check to see if git status has changed, saves time compiling if not + nFilesDiff=$(git status --porcelain | wc -l) + if [ -f gitstatus.txt ]; then + nFilesPrev=$(wc -l < gitstatus.txt) + else # Our first time here... + nFilesPrev=0 + fi + + if [ $nFilesDiff == $nFilesPrev ] && [ -f src/.version ]; then + echo "Version has not changed since last compile: $(head -n 2 src/.version | tail -n 1)" + exit 0 + else + writegitversion + git status --porcelain > gitstatus.txt + echo "Writing GITM version to file: $(head -n 2 src/.version | tail -n 1)" + + fi + +else # if .git/ does not exist, this is probably a release + cp version.def src/.version + echo "Wrote version file for GITM: $(head -n 2 src/.version | tail -n 1)" +fi + diff --git a/src/ModGITM.f90 b/src/ModGITM.f90 index b7640d6b..6cd4c015 100644 --- a/src/ModGITM.f90 +++ b/src/ModGITM.f90 @@ -289,6 +289,7 @@ subroutine clean_mod_gitm deallocate(dAltDLon_CB) deallocate(dAltDLat_CB) deallocate(Rho) + deallocate(ColumnIntegralRho) deallocate(Temperature) deallocate(Pressure) deallocate(NDensity) diff --git a/src/inputs_to_tex.pl b/src/inputs_to_tex.pl index 72c24f42..a6f70e4a 100755 --- a/src/inputs_to_tex.pl +++ b/src/inputs_to_tex.pl @@ -46,4 +46,4 @@ close(INFILE); close(OUTFILE); -exit(1); +exit(0); diff --git a/src/set_inputs.f90 b/src/set_inputs.f90 index abcebbbf..6a28e618 100644 --- a/src/set_inputs.f90 +++ b/src/set_inputs.f90 @@ -781,21 +781,6 @@ subroutine set_inputs IsDone = .true. endif - ! case ("#OVATIONSME") - ! call read_in_logical(UseOvationSMEWave, iError) - ! call read_in_logical(UseOvationSMEIon, iError) - ! if (iError /= 0) then - ! write(*, *) 'Incorrect format for #OVATIONSME' - ! write(*, *) 'This is for using Betsy Michells aurora (OvationSME).' - ! write(*, *) 'These are all False by default:' - ! write(*, *) '' - ! write(*, *) '#OVATIONSME' - ! write(*, *) 'UseOvationSMEMono (logical)' - ! write(*, *) 'UseOvationSMEWave (logical)' - ! write(*, *) 'UseOvationSMEIon (logical)' - ! IsDone = .true. - ! endif - case ("#USECUSP") call read_in_logical(UseCusp, iError) call read_in_real(CuspAveE, iError) @@ -1060,7 +1045,7 @@ subroutine set_inputs IsDone = .true. endif - case ("#MODIFIYPLANET") + case ("#MODIFYPLANET") call read_in_real(RotationPeriodInput, iError) call read_in_real(DaysPerYearInput, iError) call read_in_real(PlanetTiltInput, iError) diff --git a/srcDoc/FAQ/faq.md b/srcDoc/FAQ/faq.md new file mode 100644 index 00000000..c964874c --- /dev/null +++ b/srcDoc/FAQ/faq.md @@ -0,0 +1,20 @@ +# Common Problems + +## The code won't compile!! + +Sorry about that. It is hard to test on every system type. + +There are some steps you can try before submitting a bug report or contacting the developers. + +1. First, try to un-install everything: +``` +make distclean +./Config.pl -uninstall +``` +2. Then, check to see if any files are changed: +``` +git status +``` +3. If any of the Fortran or Make-files have changed, you may want to `git restore` the changes. +4. Try to re-configure and then re-compile + diff --git a/srcDoc/chemistry_earth.pdf b/srcDoc/chemistry_earth.pdf deleted file mode 100644 index c9e16479..00000000 Binary files a/srcDoc/chemistry_earth.pdf and /dev/null differ diff --git a/srcDoc/chemistry_earth.tex b/srcDoc/chemistry_earth.tex deleted file mode 100644 index 148fe260..00000000 --- a/srcDoc/chemistry_earth.tex +++ /dev/null @@ -1,524 +0,0 @@ -% Copyright (C) 2002 Regents of the University of Michigan, portions used with permission -% For more information, see http://csem.engin.umich.edu/tools/swmf -\documentclass[twoside,10pt]{book} -\usepackage{times} -\usepackage{graphicx} -\usepackage{alltt} -\usepackage{amsmath} -\usepackage{epsfig} -\usepackage{fancyhdr} -\usepackage[square]{natbib} -\usepackage{multicol} -\usepackage{subfigure} -\usepackage{fancyvrb} -\usepackage{color} - -% use these lengths for a more uniform margin -% this format is more pleasing for stapling -\setlength{\oddsidemargin}{-.1 in} -\setlength{\evensidemargin}{0.0 in} -\setlength{\textwidth}{6.5 in} -\setlength{\topmargin}{0 in} -\setlength{\textheight}{8.5 in} - -\renewcommand{\deg}{^{\circ}} - - -\title{GITM Chemical Scheme for Earth \\ \large Version 2.1} -\author{A.J. Ridley} - -\begin{document} - -\pagestyle{fancy} -\lhead[\fancyplain{}{\bfseries\thepage}]{\fancyplain{}{\bfseries\rightmark}} -\rhead[\fancyplain{}{\bfseries\leftmark}]{\fancyplain{}{\bfseries\thepage}} -\cfoot{} - -%\pagestyle{headings} - -\maketitle - -\tableofcontents - -\clearpage - -%Chapter 1 -\chapter{Introduction to GITM} -\input{intro} -\label{intro.ch} - -%Chapter 2 -\chapter{Chemistry} -\label{chemistry.ch} - -\begin{equation} -O_2 \rightarrow 2O -\end{equation} -EUV dissociation rate. - -\begin{equation} -N_2 \rightarrow 2N -\end{equation} -EUV dissociation rate. - -\begin{equation} -O + O + M \rightarrow O_2 + M, \hspace{0.5 in} -R = 9.59 \times 10^{-46} e^{\frac{480}{T_n}} -\end{equation} - -\begin{equation} -N_2 \rightarrow N_2^+ -\end{equation} -EUV Ionization Rate. - -\begin{equation} -N_2 \rightarrow N_2^+ -\end{equation} -Auroral Ionization Rate. - -\begin{equation} -O_2 \rightarrow O_2^+ -\end{equation} -EUV Ionization Rate. - -\begin{equation} -O_2 \rightarrow O_2^+ -\end{equation} -Auroral Ionization Rate. - -\begin{equation} -O(^3P) \rightarrow O^+(^4S) -\end{equation} -EUV Ionization Rate. - -\begin{equation} -O(^3P) \rightarrow O^+(^2D) -\end{equation} -EUV Ionization Rate. - -\begin{equation} -O(^3P) \rightarrow O^+(^2P) -\end{equation} -EUV Ionization Rate. - -\begin{equation} -\begin{split} -O(^4S) \rightarrow & O^+(^4S) (40\%) \\ -O(^4S) \rightarrow & O^+(^2D) (40\%) \\ -O(^4S) \rightarrow & O^+(^2P) (20\%) -\end{split} -\end{equation} -Auroral Ionization Rate. - -\begin{equation} -\begin{split} -O^+(^2D) + N_2 \rightarrow & N_2^+ + O + 1.33 eV \\ -R = & 8.0\times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) + N_2 \rightarrow & N_2^+ + O + 3.02 eV \\ -R = & 4.8\times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N_2^+ + O_2 \rightarrow & O_2^+ + N_2 + 3.53 eV \\ -R = & 5.0\times 10^{-17} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.8} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N_2^+ + O \rightarrow & NO^+ + N(^2D) + 0.7 eV \\ -R = & 1.4\times 10^{-16} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.44} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N_2^+ + e^- \rightarrow & 2N(^2D) + 1.04 eV \\ -R = & 1.8\times 10^{-13} \times \bigg(\frac{T_e}{300}\bigg)^{-0.39} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N_2^+ + O \rightarrow & O^+(^4S) + N_2 + 1.96 eV \\ -R = & 1.4\times 10^{-16} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.44} -\end{split} -\end{equation} -I am not sure that this is correct, since it is the same as 2.8. - -\begin{equation} -\begin{split} -N_2^2 + NO \rightarrow & NO^+ + N_2 + 6.33 eV \\ -R = & 4.1 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^4S) + O_2 \rightarrow & O_2^+ + O + 1.55 eV \\ -R = & 2.82 \times 10^{-17} \\ - & - 7.740\times 10^{-18}(T_{O2}/300.0) \\ - & + 1.073\times 10^{-18}(T_{O2}/300.0)^2 \\ - & - 5.170\times 10^{-20}(T_{O2}/300.0)^3 \\ - & + 9.650\times 10^{-22}(T_{O2}/300.0)^4 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) + O_2 \rightarrow & O_2^+ + 4.865 eV \\ -R = & 7.0 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N^+ + O_2 \rightarrow & O_2^+ + N(^4S) + 2.486 \\ -R = & 1.1 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N^+ + O_2 \rightarrow & O_2^+ + N(^4D) + 0.1 \\ -R = & 2.0 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O_2^+ + e^- \rightarrow & O(^1D) + O(^1D) + 3.06 eV (31\%) \\ -O_2^+ + e^- \rightarrow & O(^3P) + O(^1D) + 3.06 eV (42\%) \\ -O_2^+ + e^- \rightarrow & O(^3P) + O(^3P) + 3.06 eV (22\%) \\ -R = & 2.4\times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.7} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O_2^+ + N(^4S) \rightarrow & NO^+ + O + 4.25 eV \\ -R = & 1.5 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O_2^+ + NO \rightarrow & NO^+ + O_2 + 2.813 eV \\ -R = & 4.6 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O_2^+ + N_2 \rightarrow & NO^+ + NO + 0.9333 eV \\ -R = & 5.0 \times 10^{-22} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) + O \rightarrow & O^+(^4S) + O(^3P) + 3.31 eV \\ -O^+(^2D) + O \rightarrow & O^+(^4S) + O(^1D) + 1.35 eV \\ -R = & 1.0 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) + e^- \rightarrow & O^+(^4S) + e^- + 3.31 eV \\ -R = & 7.8 \times 10^{-14}\bigg(\frac{T_e}{300}\bigg)^{-0.5} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) + N_2 \rightarrow & O^+(^4S) + N_2 + 3.31 eV \\ -R = & 8.0 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) + O \rightarrow & O^+(^4S) + O + 5.0 eV \\ -R = & 5.2 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) + e^- \rightarrow & O^+(^4S) + e^- + 5.0 eV \\ -R = & 4.0 \times 10^{-14}\bigg(\frac{T_e}{300}\bigg)^{-0.5} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) \rightarrow & O^+(^4S) + 247.0nm\\ -R = & 0.047 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N^+ O_2 \rightarrow & O^+(^4S) + NO + 2.31 eV\\ -R = & 3.0 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^4S) + N_2 \rightarrow & NO^+ + N(^4S) + 1.10 eV\\ -T_{eff} = & T_i + \frac{M_O}{M_O + M_{N_2}}\times\frac{M_{N_2} - M_b}{3k_b}V_i^2 \\ -M_b = &\frac{M_c}{M_{mc}} \\ -M_c = & \sum_n \frac{M_n\nu_{in}}{M_n + M_O} \\ -M_{mc} = & \sum_n \frac{ \nu_{in}}{M_n + M_O} \\ -R = & 1.533\times 10^{-18} - \\ - & 5.920\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg) + \\ - & 8.600\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 (T_{eff} < 1700) \\ -R = & 2.730\times 10^{-18} - \\ - & 1.155\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg) + \\ - & 1.483\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg)^2 (T_{eff} > 1700) -\end{split} -\end{equation} -If $T_{eff} < 350$, then $T_{eff} = 350$. -If $T_{eff} > 6000$, then $T_{eff} = 6000$. - -\begin{equation} -\begin{split} -O^+(^4S) + O_2 \rightarrow & O_2^+ + O + 1.55 eV\\ -R = & 2.820\times 10^{-17} - \\ - & 7.740\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg) + \\ - & 1.073\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg)^2 - \\ - & 5.170\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^3 + \\ - & 9.650\times 10^{-22} \bigg(\frac{T_{eff}}{300}\bigg)^4\\ -T_{eff} = & T_i + \frac{M_O}{M_O + M_{O_2}}\times\frac{M_{O_2} - M_b}{3k_b}V_i^2 -\end{split} -\end{equation} -If $T_{eff} < 350$, then $T_{eff} = 350$. -If $T_{eff} > 6000$, then $T_{eff} = 6000$. - -\begin{equation} -\begin{split} -O^+(^4S) + NO \rightarrow & NO^+ + O + 4.36 eV\\ -R = & 8.36\times 10^{-19} - \\ - & 2.02\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg) + \\ - & 6.95\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 (T_{eff} < 1500)\\ -R = & 5.33\times 10^{-19} - \\ - & 1.64\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg) + \\ - & 4.72\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 \\ - & 7.05\times 10^{-22} \bigg(\frac{T_{eff}}{300}\bigg)^3 (T_{eff} > 1500) \\ -T_{eff} = & T_i + \frac{M_O}{M_O + M_{NO}}\times\frac{M_{NO} - M_b}{3k_b}V_i^2 -\end{split} -\end{equation} -If $T_{eff} < 350$, then $T_{eff} = 350$. -If $T_{eff} > 6000$, then $T_{eff} = 6000$. - -\begin{equation} -\begin{split} -O^+(^4S) + N(^2D) \rightarrow & N^+ + O + 1.45 eV\\ -R = & 1.3 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) +e^- \rightarrow & O^+(^2D) + e^- + 1.69 eV\\ -R = & 1.3 \times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) \rightarrow & O^+(^2D) + 732nm\\ -R = & 0.171 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) \rightarrow & O^+(^4S) + 372.6nm\\ -R = & 7.7\times 10^{-5} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) + N_2 \rightarrow & N^+ + NO + 0.70 eV\\ -R = & 1.0 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+_2 + N(^2D) \rightarrow & N^+ + O_2 \\ -R = & 2.5 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2P) + N \rightarrow & N^+ + O + 2.7 eV \\ -R = & 1.0 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O^+(^2D) + N \rightarrow & N^+ + O + 1.0 eV \\ -R = & 7.5 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N^+ + O_2 \rightarrow & NO^+ + O(^1D) + 6.67 eV \\ -R = & 2.6 \times 10^{-16} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N^+ + O \rightarrow & O^+(^4S) + N + 0.93 eV \\ -R = & 5.0 \times 10^{-19} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -NO^+ + e^- \rightarrow & O + N(^2D) + 0.38 eV \\ -R = & 4.0 \times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2D) + e^- \rightarrow & N(^4S) + e^- + 2.38 eV\\ -R = & 5.5 \times 10^{-16} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2D) + O \rightarrow & N(^4S) + O(^3P) + 2.38 eV (90\%)\\ -N(^2D) + O \rightarrow & N(^4S) + O(^1D) + 0.42 eV (10\%)\\ -R = & 2.0 \times 10^{-18} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2D) \rightarrow & N(^4S) + 520nm \\ -R = & 1.06 \times 10^{-5} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -NO \rightarrow & N(^4S) + O \\ -R = & 4.5 \times 10^{-6} e^{(-1\times 10^{-8}([O_2]\times 10^{-6})^{0.38})} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^4S) + O_2 \rightarrow & NO + O + 1.385 eV \\ -R = & 4.4 \times 10^{-18} e^{-\frac{3220}{T_n}} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^4S) + NO \rightarrow & N_2 + O + 3.25 eV\\ -R = & 1.5 \times 10^{-18} \sqrt{T_n} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2P) \rightarrow & N(^2D) + 1040nm\\ -R = & 7.9 \times 10^{-2} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2D) + O_2 \rightarrow & NO + O(^3P) + 3.76 eV (90\%)\\ -N(^2D) + O_2 \rightarrow & NO + O(^1D) + 1.80 eV (10\%)\\ -R = & 6.2 \times 10^{-18} \frac{T_n}{300} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -N(^2D) + NO \rightarrow & N_2 + O + 5.63 eV\\ -R = & 7.0 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O(^1D) \rightarrow & O(^3P) + 630nm\\ -R = & 0.0071 -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O(^1D) \rightarrow & O(^3P) + 636.4nm\\ -R = & 0.0022 -\end{split} -\end{equation} -I don't understand this... - - -\begin{equation} -\begin{split} -O(^1D) + e^- \rightarrow & O(^3P) + e^- + 1.96 eV\\ -R = & 2.6 \times 10^{-17} T_e^(0.5)e^(-22740/T_e) -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O(^1D) + N_2 \rightarrow & O(^3P) + N_2 + 1.96 eV\\ -R = & 2.3 \times 10^{-17} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O(^1D) + O_2 \rightarrow & O(^3P) + O_2 + 1.96 eV\\ -R = & 2.9 \times 10^{-17} e^{\frac{67.5}{T_n}} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -O(^1D) + O(^3P) \rightarrow & 2O(^3P) + 1.96 eV\\ -R = & 8.0 \times 10^{-18} -\end{split} -\end{equation} - -\begin{equation} -\begin{split} -NO \rightarrow & NO^+ + e^-\\ -R = & 5.88 \times 10^{-7}(1+0.2(F10.7-65)/100)e^F\cos(SZA)\\ -F = & (\frac{[O_2]}{1\times 10^{6}})^{0.8855} -\end{split} -\end{equation} - - -%Bibliography -\clearpage -\addcontentsline{toc}{chapter}{Bibliography} -\bibliographystyle{chicagoa} -\bibliography{gitm} - -\end{document} diff --git a/srcDoc/common_inputs.md b/srcDoc/common_inputs.md new file mode 100644 index 00000000..5848f484 --- /dev/null +++ b/srcDoc/common_inputs.md @@ -0,0 +1,429 @@ +# Common Inputs {#indices.sec} + +This only touches on the most frequently changed input options. For a full +reference of all available inputs, please see [All Inputs](set_inputs.md) + +## Time + +The start time and end time of a GITM simulation can be set using the following commands (as an example): + +```bash +#TIMESTART +2002 year +12 month +21 day +00 hour +00 minute +00 second + +#TIMEEND +2002 year +12 month +21 day +00 hour +05 minute +00 second +``` + +Hopefully these are obvious what they are. + +## Setting the grid + +GITM can simulate the whole planet or a portion of the planet. Unless you know what you +are doing, I would stick to modeling the whole planet. This can be done with the +following command (as an example): + +```bash +#GRID +2 number of blocks in longitude +2 number of blocks in latitude +-90.0 minimum latitude to model +90.0 maximum latitude to model +0.0 longitude start to model (set to 0.0 for whole Earth) +0.0 longitude end to model (set to 0.0 for whole Earth) +``` +The first two numbers control the resolution. The higher these numbers, the finer the +resolution, but the more processors you will need - you need one processor for each +block that you asked for (2 x 2 = 4 blocks / processors). For example, if you wanted to +run at 5 degrees by 5 degrees reolution, the following could be used: + +```bash +#GRID +8 number of blocks in longitude +4 number of blocks in latitude +-90.0 minimum latitude to model +90.0 maximum latitude to model +0.0 longitude start to model (set to 0.0 for whole Earth) +0.0 longitude end to model (set to 0.0 for whole Earth) +``` +and 32 processors would be needed. + +There is a lot more to learn here, so we have written a whole section on this. [See this grid description for more.](internals/grid.md). + + +## Saving output files + +GITM outputs a wide variety of output files. [There is a whole section that describes them.](outputs.md) + +Output files are controlled with the `#SAVEPLOTS` command. + +The first line says how often to output restart files, which we will set aside for a +bit. It is ok to leave this as 2 hours (7200 - these are all specified in seconds), +unless you know what you are doing. + +The second line tells GITM how many types of output files you want. + +The following lines tell GITM what type of file output you want and how often you want +them. The most common type of output is 3DALL, which includes all ion and neutral states +(densities, temperatures, velocities). + +An example: +```bash +#SAVEPLOTS +7200.0 dt for writing restart files +1 how many output files do you want +3DALL first output style +900.0 dt for output (one every 15 min) +``` + +This will output restart files every 2 hours (this can be ignored) and 3DALL files every +15 minutes. 2 hours is from 7200.0 seconds, and 15 minutes is from 900.0 seconds. + +Another example: +```bash +#SAVEPLOTS +7200.0 dt for writing restart files +3 how many output files do you want +3DALL first output style +900.0 dt for output (one every 15 min) +2DGEL second output style +300.0 dt for output (one every 15 min) +3DTHM third output style +900.0 dt for output (one every 15 min) +``` + +2DGEL files output things like the electric potential and auroral precipitation on the +geographic grid at the top of the model. 3DTHM files are thermodynamic variables such +as heating and cooling rates. + +!!!note + All of the auxiliary input (data) files can (and should) be kept in the same run directory + as the linked GITM executable and the `UAM.in` file. Otherwise, the path should be + specified in the UAM.in file relative to the run directory. + +## IMF and Solar Wind {#imf.sec} + +This file controls the high-latitude electric field and aurora when +using models that depend on the solar wind and interplanetary magnetic +field (IMF). It allows GITM to dynamically control these quantities. You +can create either realistic IMF files or hypothetical ones. + +A script is provided to automatically download these files, and can be called +using the `srcPython/omni_download_write_swmf.py` python file. + +Here is an example file: + + This file was created by Aaron Ridley to do some wicked cool science thing. + + The format is: + Year MM DD HH Mi SS mS Bx By Bz Vx Vy Vz N T + + Year=year + MM = Month + DD = Day + HH = Hour + Mi = Minute + SS = Second + mS = Millisecond + Bx = IMF Bx GSM Component (nT) + By = IMF By GSM Component (nT) + Bz = IMF Bz GSM Component (nT) + Vx = Solar Wind Vx (km/s) + Vy = Solar Wind Vy (km/s) + Vz = Solar Wind Vz (km/s) + N = Solar Wind Density (/cm3) + T = Solar Wind Temperature (K) + + #DELAY + 900.0 + + #START + 2000 3 20 2 53 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 54 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 55 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 56 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 57 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 58 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 2 59 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 3 0 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 3 1 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 3 2 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 3 3 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 + 2000 3 20 3 4 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 + +This file is provided to GITM by setting the input: + +```bash +#MHD_INDICES +imf_file_name.dat +``` + + +## SME Indices + +To use models such as FTA[^1] to drive the aurora, GITM must be provided with Auroral +Electrojet (AE) indices. Normally this is from SuperMag (hence the name "SME": +SuperMag auroral Electrojet), but any source may be used. + +[^1]: Wu, C., Ridley, A. J., DeJong, A. D., & Paxton, L. J. (2021). FTA: A Feature Tracking Empirical Model Of Auroral Precipitation. Space Weather, 19, e2020SW002629. . + +These files are normally of the format: + + File created by python code using SuperMAGGetIndices + + ============================================================ + + 2002 12 21 00 00 00 616.74 -354.47 262.26 + 2002 12 21 00 01 00 623.75 -354.72 269.03 + 2002 12 21 00 02 00 617.18 -349.28 267.90 + 2002 12 21 00 03 00 633.56 -350.01 283.55 + 2002 12 21 00 04 00 664.55 -357.88 306.68 + +A python routine to download these files over a given date range can be found +in `srcPython/supermag_download_ae.py`. + +The corresponding section in `UAM.in` is read as: +```bash +#SME_INDICES +ae_file-name.dat ae file name +none onset file +T use AE for HP +F don't automatically incorporate hemispheric asymmetries +``` + +The lines following the AE file-name are for the AL-onset file. This can be set to +`none` if you do not have one or do not know what that means. The next line tells GITM +whether to derive HP (Hemispheric Power) from AE or to use a NOAA HPI file (if one is +required). Since production of hemispheric power was stopped by NOAA in 2013 (the world +has moved on), it is best to use the HP derived from AE. + +Even if AE is not required, it is recommended to provide a SME file as input to +derive HP, as it is often more representative of geomagnetic conditions than the NOAA +HPI (maybe this is why they stopped producing it). The formula to calculate hemispheric +power (HP) from AE is taken from (Wu et al., 2021)[^1] and is given as: + +```math +\begin{align} +HemisphericPower = 0.102 * AE + 8.953 +\end{align} +``` + +*[HP]: Hemispheric Power + +## Hemispheric Power {#hp.sec} + +The hemispheric power files describe the dynamic variation of the auroral power going +into each hemisphere. Models such as FRE[^FRE] use the Hemispheric Power to determine +which level of the model it should use. It is recommended to not use the NOAA provided +HP files, but to use the AE derived HP, as described above. But, if you are a purist, +the National Oceanic and Atmospheric Administration (NOAA) provides these hemispheric +power files for public use online at . +There are two types of formats used for hemispheric power files (due to a change in the +NOAA output format in 2007). Both file formats can be used by GITM, and are shown in the +examples below. + +[^FRE]: Fuller-Rowell, T. J., and D. S. Evans (1987), Height-integrated Pedersen + and Hall conductivity patterns inferred from the TIROS-NOAA satellite data, + J. Geophys. Res., 92(A7), 7606–7618, + doi:[10.1029/JA092iA07p07606](https://doi.org/10.1029/JA092iA07p07606). + +!!! tip + GITM can read a NOAA HPI file, however the recommended way to provide + hemispheric power is to have GITM derive HPI from the AE-index. Seriously. + + See [SME Indices](#sme-indices) for more information. + +Example file 1 for data prior to 2007: + + # Prepared by the U.S. Dept. of Commerce, NOAA, Space Environment Center. + # Please send comments and suggestions to sec@sec.noaa.gov + # + # Source: NOAA POES (Whatever is aloft) + # Units: gigawatts + + # Format: + + # The first line of data contains the four-digit year of the data. + # Each following line is formatted as in this example: + + # NOAA-12(S) 10031 9.0 4 .914 + + # Please note that if the first line of data in the file has a + # day-of-year of 365 (or 366) and a HHMM of greater than 2300, + # that polar pass started at the end of the previous year and + # ended on day-of-year 001 of the current year. + + # A7 NOAA POES Satellite number + # A3 (S) or (N) - hemisphere + # I3 Day of year + # I4 UT hour and minute + # F8.1 Estimated Hemispheric Power in gigawatts + # I3 Hemispheric Power Index (activity level) + # F8.3 Normalizing factor + + 2000 + NOAA-15(N) 10023 35.5 7 1.085 + NOAA-14(S) 10044 25.3 7 .843 + NOAA-15(S) 10114 29.0 7 .676 + NOAA-14(N) 10135 108.7 10 1.682 + NOAA-15(N) 10204 36.4 7 1.311 + . + . + . + +Example file 2 for data in and after 2007: + + :Data_list: power_2010.txt + :Created: Sun Jan 2 10:12:58 UTC 2011 + + + # Prepared by the U.S. Dept. of Commerce, NOAA, Space Environment Center. + # Please send comments and suggestions to sec@sec.noaa.gov + # + # Source: NOAA POES (Whatever is aloft) + # Units: gigawatts + + # Format: + + # Each line is formatted as in this example: + + # 2006-09-05 00:54:25 NOAA-16 (S) 7 29.67 0.82 + + # A19 Date and UT at the center of the polar pass as YYYY-MM-DD hh:mm:ss + # 1X (Space) + # A7 NOAA POES Satellite number + # 1X (Space) + # A3 (S) or (N) - hemisphere + # I3 Hemispheric Power Index (activity level) + # F7.2 Estimated Hemispheric Power in gigawatts + # F7.2 Normalizing factor + + 2010-01-01 00:14:37 NOAA-17 (N) 1 1.45 1.16 + 2010-01-01 00:44:33 NOAA-19 (N) 1 1.45 1.17 + . + . + . + +The file type is automatically inferred. To provide an HPI file, use: + +```bash +#NOAAHPI_INDICES +hemi-power-file.txt +``` + + +## Solar Irradiance {#solar_irradiance.sec} + +To provide GITM with realistic solar irradiance, the solar EUV must be +specified. There are two pathways for doing this. The easiest is to simply specify the F10.7. GITM then runs some EUV empirical models of the irradiance (such as EUVAC), and uses these results to drive GITM. The F10.7 is provided with GITM, so you can just point GITM to this file and be done: +```bash +#NGDC_INDICES +UA/DataIn/f107.txt +``` +It should be noted that MSIS also needs F10.7, so really this command should be included in every UAM.in file. + +In addition, GITM can use the Flare Irradiance Spectrum Model specification of the EUV flux. Daily values of FISM can be used unless you are doing a flare study. These daily values are included with GITM and can be found in UA/DataIn/FISM. As an example, a yearly file can be used with the command (for example): +```bash +#EUV_DATA +T Use FISM solar flux data +UA/DataIn/FISM/fismflux_daily_2002.dat Filename for specific year +``` + +An example from the FISM model is shown below. + + #START + 2009 3 20 0 0 0 0.00389548 0.00235693 + 0.00127776 0.000907677 0.000652528 0.000372993 0.000250124 0.000194781 + 0.000389686 0.000118650 0.00642058 0.00618358 0.000133490 7.67560e-05 + 7.80045e-05 0.000145722 5.92577e-05 5.95070e-05 0.000102437 6.48526e-05 + 8.94509e-05 0.000101928 5.94333e-05 5.36012e-05 1.51744e-05 1.10265e-05 + 1.26937e-05 2.16591e-05 9.57055e-06 1.82608e-05 7.07992e-05 2.55451e-05 + 1.12451e-05 6.89255e-05 3.03882e-05 2.33862e-05 2.98026e-05 4.44682e-05 + 1.50847e-05 3.00909e-05 8.18379e-05 3.52176e-05 0.000416491 0.000269080 + 0.000269080 0.000275734 6.60872e-05 4.46671e-05 0.000220697 0.000512933 + 3.85239e-05 9.30928e-05 2.71239e-05 1.23011e-05 1.05722e-05 9.30876e-06 + 7.08442e-07 3.54221e-07 1.77110e-07 + 2009 3 20 0 1 0 0.00389548 0.00235693 + 0.00127776 0.000907677 0.000652528 0.000372993 0.000250124 0.000194781 + 0.000389686 0.000118650 0.00642058 0.00618358 0.000133490 7.67560e-05 + 7.80045e-05 0.000145722 5.92577e-05 5.95070e-05 0.000102437 6.48526e-05 + 8.94509e-05 0.000101928 5.94333e-05 5.36012e-05 1.51744e-05 1.10265e-05 + 1.26937e-05 2.16591e-05 9.57055e-06 1.82608e-05 7.07992e-05 2.55451e-05 + 1.12451e-05 6.89255e-05 3.03882e-05 2.33862e-05 2.98026e-05 4.44682e-05 + 1.50847e-05 3.00909e-05 8.18379e-05 3.52176e-05 0.000416491 0.000269080 + 0.000269080 0.000275734 6.60872e-05 4.46671e-05 0.000220697 0.000512933 + 3.85239e-05 9.30928e-05 2.71239e-05 1.23011e-05 1.05722e-05 9.30876e-06 + 7.08442e-07 3.54221e-07 1.77110e-07 + . + . + . + +If you want to create your own files, there is a code in srcPython to download and produce the FISM files. You can use this python code to download daily values or flare values (although the flare files are huge compared to the yearly files). + +## Satellites {#sat_aux.sec} + + + +GITM can provide output data at a list of times and locations using the +SATELLITE input option. Although this is designed to output data along +a satellite orbit, any list of locations may be used. There is currently +no routine to create a satellite input file, but the format is simple +and may be easily constructed from a satellite ASCII data file using +awk or Python. Here is a sample satellite input file: + + year mm dd hh mm ss msec long lat alt + #START + 2002 4 16 23 34 25 0 299.16 -2.21 0.00 + 2002 4 16 23 34 25 0 293.63 -1.21 0.00 + 2002 4 16 23 34 25 0 291.28 -0.75 0.00 + 2002 4 16 23 34 25 0 289.83 -0.45 0.00 + 2002 4 16 23 34 25 0 288.79 -0.21 0.00 + 2002 4 16 23 34 25 0 287.98 -0.01 0.00 + 2002 4 16 23 34 25 0 287.32 0.16 0.00 + 2002 4 16 23 34 25 0 286.76 0.31 0.00 + 2002 4 16 23 34 25 0 286.26 0.46 0.00 + 2002 4 16 23 34 25 0 285.81 0.60 0.00 + 2002 4 16 23 34 25 0 285.39 0.74 0.00 + +Note that the satellite output type is not specified in this sample file. This +is because altitude entry doesn't matter at this time, GITM ignores the altitude +and outputs altitudinal profiles of the atmospheric characteristics at each +geographic location and universal time. Although millisecond accuracy is +provided, GITM should not be output at a resolution smaller than 1 second. The +temporal resolution in the satellite file does not need to match the output +resolution. + +Because GITM by default outputs one file for every output time, if you use a satellite +file, it produces a LOT of files. + +The types of outputs are specified in the `#SATELLITES` section of the UAM.in file. The +number of satellites must be speficied along with the path to the locations, output type +& cadence for each file. For example, if we want to output 3DALL files for one satellite +every 2 minutes, we would use: + + #SATELLITES + 1 nSats + satfile1.txt sat file name + 3DALL output type + 120.0 output cadence, in seconds + +Or for two satellites, every 1 minute: + + #SATELLITES + 2 nSats + satfile1.txt sat file name + 3DALL output type + 60.0 output cadence, in seconds + satfile2.txt sat file name + 3DALL output type + 60.0 output cadence, in seconds diff --git a/srcDoc/dev_team.md b/srcDoc/dev_team.md deleted file mode 100644 index 91ee651d..00000000 --- a/srcDoc/dev_team.md +++ /dev/null @@ -1,42 +0,0 @@ -GITM Development Team -======================= - -## Active Developers: - -Aaron Ridley (Source terms, Electrodynamics) - UM - -Jared Bell (Solvers) - NASA GSFC - -Brandon Ponder (Venus) - UM - -Dave Pawlowski (Mars, FISM) - EMU - -Garima Malhotra (Lower boundary) - NOAA/CU - -Xing Ming (Wave Perturbations, Localized Electrodynamics) - JPL - -Doga Ozturk (Localized Electrodynamics) - UAF - -Chen Wu (Lower boundary, Eclipse) - UM - -Angeline Burrell (python code and random things) - NRL - -Meghan Burleigh (Coupling to SWMF) - NRL - -Leonardo Regoli (Coupling to SWMF, Mars) - -## Past Developers: - -Jie Zhu (Ti + Te calculation) - Microsoft - -Xianjing Liu (Helium at Earth) - -Alexey Morozov (Coupling with DART) - -Darren De Zeeuw (Field-line integrator) - UM - -Yue Deng (Many aspects of the original code) - UTA - -Gabor Toth (Rusanov solvers) - UM - -Robert Oehmke (MPI / message passing) - NCAR? \ No newline at end of file diff --git a/srcDoc/devstuff/devhome.md b/srcDoc/devstuff/devhome.md new file mode 100644 index 00000000..c8d6da18 --- /dev/null +++ b/srcDoc/devstuff/devhome.md @@ -0,0 +1,55 @@ + +# Developers + +Here is some information which may be useful to developers. + +## Documentation Notes + +Some notes on the doc site: + +- See the [markdown style guide](markdown_ref.md) for info on what features are + available. +- The documentation is organized according to a table of contents listed in + `GITM/mkdocs.yml`. So, to add new pages or organize things differently, look + there. +- Within `mkdocs.yml`, paths are specified relative to `site_home` (cuttently + set to `srcDoc/`) +- `index.md` is the "home page". The rest should be self-explanatory enough. + +Writing docs can be tricky. Formatting is sometimes not what you would expect. +For example, we *need* four spaces to indent something, not just two. I tried +changing this & couldn't! + +You can use Python to locally host the doc site which will auto-update when any +files are changed. One command to configure, one to host. When first starting, +either create a vitrual/conda environment for the docs, or don't, and from the +root of the repo run: `pip install -r srcDoc/requirements.txt`. To actually host +the docs, run (from `GITM/`): + +```bash +mkdocs serve +``` + +And it should be auto-magic. open the link in your browser. + +## Versioning + +GITM now builds the code version into the executable automatically. This is sourced +from `src/.version` within `src/ModGITMVersion.f90`. + +The version file is created when compiling, and checked every time the code is compiled. +If the number of files that are different from HEAD changes, the version is updated. +In practice this means that if the number of lines output from +`git status --porcelain` changes, the version is updated. + +The version has information on the last commit date, the branch, the last commit hash, +and the number of files changed since the last commit. This should provide enough +information to track down any kinds of bugs or to ensure that results can be traced +back to a certain state of the code. + +The file is created in the last step of compiling by the shell script +`share/Scripts/Makeversion.sh`. + +If the `.git` folder does not exist (so the code was downloaded as a .zip from GitHub), +the version info is taken from `version.def` at the root folder. This should be updated +whenever the code is released. diff --git a/srcDoc/devstuff/markdown_ref.md b/srcDoc/devstuff/markdown_ref.md new file mode 100644 index 00000000..78b8ae1a --- /dev/null +++ b/srcDoc/devstuff/markdown_ref.md @@ -0,0 +1,314 @@ +# Markdown Style Reference + +This document is not a markdown tutorial. It's merely a guide to the features +available on this site. GITM's ReadTheDocs site is built using MkDocs and a +number of plugins. This takes the (relatively) vanilla Markdown of MkDocs and +extends its functionality. + +To develop locally, one can simply install the Python requirements in +`srcDoc/requirements.txt` and then spin up a MkDocs server, previewing the +documentation live! It's very useful. + +```bash +pip install -r srcDoc/requirements.txt +mkdocs serve +``` + +--- + +Table of contents can be inserted with + +```markdown +[TOC] +``` + +For example (ensuring there are newlines before & after): + +[TOC] + +## General Syntax + +Markdown can put *italics* and **bold** in really easily by surrounding the text +with one and two asterisks \*, respectively (i.e. `*italics*` and `**bold**`). +There are \*escape\* characters available too; use a backslash before an +asterisk to have it shown `\*`. For **bold** and **italics**, use three +***asterisks***. + +For a new paragraph, use two line breaks. otherwise it is the same paragraph. + +> we can note that something should be indented with `>` at the beginning of a +> line. + +To mark something for ~~deletion~~, use two tilde `~~`, and to mark for +++insertion++, use two pluses `++`. + +Headers work as one would expect; use a single # for header one, and more #'s +for each sub-level. Horizontal lines can be made with ---, surrounded by +newlines before & after. + +--- + +### Lists + +Lists can be: + +1. Ordered +1. Like this one +5. Which is numbered automatically. + - automatic numbering is nice for ordered lists. Edits can be made without + the need to go back and change every single entry. + - we can nest lists, and switch between ordered/unordered. + + ```python + print("hello world!") + ``` + +6. The list should be smart enough to resume counting after we take a break to + do something, as long as it is indented + +### Code + +Code can be shown either inline: `print("hello world")`, or in a block: + +````md +```python +print("hello world") +``` +```` + +Code blocks' syntax (highlighting) can be set after the three backticks. The +above block uses python syntax. + +Additionally, one can **include** the three backticks in a code block by +surrounding it with a different number of backticks. As a ridiculous example: + +`````md +```` +```python +print("hello world!") +``` +```` +````` + +### Links + +Links are specified with `[link text](the_link)`. The first option is the text +to display, the second is the actual link. For example, [here is the link to the +GITM repository](https:github.com/GITMCode/GITM.git). It is ok to have +linebreaks within the link text. + +## More Complex Syntax + +### Comments, Abbreviations + +Comments use HTML syntax: `` + +Define an abbreviation with: `*[TEXT]: Definition`. Hover over HTML to see its +definition. + + +*[HTML]: Hypertext Markup Language + +That abbreviation will stick around across the entire page, as it is HTML. + +### Footnotes + +We can add a footnote, such as[^1]. Footnotes have a label, specified with +`[^2]`, and that label can be anything we want, for example [^longerfootnote]. + +[^1]: This is footnote content. + +Footnotes are automatically numbered. One can place the footnote definition +anywhere in the document[^bottom]. The footnotes do not need to be defined in +order as long as their labels are unique (i.e. we can put anything we want for a +label, as long as it is unique, `[^aHJpxms]`, for example)[^notbottom]. + +[^notbottom]: This footnote is defined out of order to when it is first + referenced. It affects the numbers given to other footnotes. + +[^longerfootnote]: + + The links back to the text are handled automatically. Hover over the above + text if you do not see an arrow. + + Multi-line comments are the same as body text - they need two newlines. To + continue writing the footnote, text must be indented with 4 spaces or a tab. + + These descriptions can be placed anywhere within the document. + +Footnotes are great for citations! + +### References {gohere} + +We can add references to any header level. Links are automatically created, but +we can make out own by adding `{#refname}` to the header. If we do not add +anything, the name for `## a subheader section` would be `#a-subheader-section.` + +Then later we can point to it like any other hyperlink. For example, +`[this link will go to the above subsection](#a-subheader-section)`. +Or, a real one: +[this link points to the More Complex Syntax](#more-complex-syntax) sub-header. + +## Admonitions + +Admonitions are these fancy boxes. See [here](https://squidfunk.github.io/mkdocs-material/reference/admonitions/#customization) for more information + +!!! tip + Our theme (material) supports some non-standard admonitions + +!!! warning + Here's a warning. new lines need two breaks. + + Here's how to put multiple lines in an admonition + +!!! danger + This is for something very serious + +!!! bug "custom label" + notes can be given custom labels! + + This uses the `bug` callout + +!!! OnlyTheFirstWordFromTheLabel is shown + Stick to using `!!!note "multi word label"` when possible. + +## Math + +Math can be done inline, differing from LaTex in that we need to use $\` and \`$ +to surround the math. For example, $`\pi \approx \frac{22}{7}`$ is an equation +*inline*. For equation blocks we need to surround it with backticks, like so: + + +```` +```math +% comments can be placed in math mode +\begin{align} + E=mc^2 +\end{align} +``` +```` + +Which produces: + +```math +% comments can be placed in math mode +\begin{align} + E=mc^2 +\end{align} +``` + +For numbered equations, use `\begin{align}` and `\end{align}` surrounding the +equation. These are consistently numbered throughout the document. + +```math +\pi \approx \frac{22}{7} = \mathbf{3.14}28... +``` + +```math +\begin{align} + p(v_i=1|\mathbf{h}) & = \sigma\left(\sum_j w_{ij}h_j + b_i\right) \\ + p(h_j=1|\mathbf{v}) & = \sigma\left(\sum_i w_{ij}v_i + c_j\right) +\end{align} +``` + +## Images + +### Figures + +Insert images with `![caption text](relative/path/to/image)`. The caption will +appear below the image, for example: + +![hmf2 flowchart example figure](../Figures/determining_hmF2_flowchart.png) + +This figure was made with the code: + +```md +![hmf2 flowchart example figure](Figures/determining_hmF2_flowchart.png) +``` + +Alternatively, you may not wish to write out the path inline if it may change +later. Having all the paths to figures in one place will make moving things +around later much easier. Figures can be made with a *reference*, then specify the +path later, using: + +```md +Some terrific, fantastic documentation. + +![Description of something cool.][ref1] + +More splendid documentation. + +[ref1]: /path/to/image +``` + +To forgo a caption entirely (they aren't even that useful), just do not include +it in the `![](../path/to/image)`. For example: + +![](../Figures/determining_hmF2_flowchart.png) + +See? No caption! It is possibly to define a new style for figures, and to +uniquely number them, but it is probably not worth doing. + +### Flowcharts + +I'm including this because it's cool, but may not be too useful. We can utilize +something called [Mermaid](https://mermaid.js.org/) to make flowcharts with +relatively simple syntax. Some helpful links to get started would be this +[beginner's guide](https://mermaid.js.org/intro/getting-started.html) and the +[live editor](https://mermaid.live/), which allows for live development of a +mermaid chart. + +Charts are put in automatically. + +```mermaid +graph TD + A[Input] --> B[Think] + B --> C[Outcome One] + B --> D[Outcome Two] +``` + +The above example uses: + +````md + +```mermaid +graph TD + A[Input] --> B[Think] + B --> C[Outcome One] + B --> D[Outcome Two] +``` +```` + +Labels can be added to the arrows. The following code has a simple example: + +````md +``` mermaid +graph LR + A[Start] --> B{Error?}; + B -->|Yes| C[Hmm...]; + C --> D[Debug]; + D --> B; + B ---->|No| E[Yay!]; +``` +```` + + +``` mermaid +graph LR + A[Start] --> B{Error?}; + B -->|Yes| C[Hmm...]; + C --> D[Debug]; + D --> B; + B ---->|No| E[Yay!]; +``` + +!!! note + The chart's direction is set with `TD` (top-down) and `LR` (left-right). + + > More complex charts are available. Check the Mermaid documentation for + examples! + +--- + +[^bottom]: This footnote is defined at the bottom of the document. Probably not + the best for making edits! diff --git a/srcDoc/devstuff/outline.md b/srcDoc/devstuff/outline.md new file mode 100644 index 00000000..b5901548 --- /dev/null +++ b/srcDoc/devstuff/outline.md @@ -0,0 +1,597 @@ +`main program` in **main.f90** + +- `init_mpi` in file **init_mpi.f90** + + - `MPI_INIT` + + - `MPI_COMM_RANK` + + - `MPI_COMM_SIZE` + +- `start_timing` in file **timing.f90** + +- `delete_stop` in file **stop_file.f90** + + - `report` in file library.f90 + +- `init_planet` in file **ModEarth.f90** + + - `time_int_to_real` in file time_routines.f90 + +- `set_defaults` in file **ModInputs.f90** + + - `set_strings` in file ModInputs.f90 + + - `time_int_to_real` in file time_routines.f90 + + - `set_planet_defaults` in file Earth.f90 + +- `read_inputs` in file **read_inputs.f90** + + - `report` in file library.f90 + + - `stop_gitm` in file library.f90 + + - `stop_gitm` in file library.f90 + + - `stop_gitm` in file library.f90 + + - `MPI_Bcast` + + - `stop_gitm` in file library.f90 + + - `MPI_Bcast` + + - `stop_gitm` in file library.f90 + +- `set_inputs` in file **set_inputs.f90** + + - `report` in file library.f90 + + - `read_in_int` in file set_inputs.f90 + + - `time_int_to_real` in file time_routines.f90 + + - `time_real_to_int` in file time_routines.f90 + + - `fix_vernal_time` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `time_int_to_real` in file time_routines.f90 + + - `read_in_time` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `time_real_to_int` in file time_routines.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `IO_set_f107_single` + + - `IO_set_f107a_single` + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `IO_set_hpi_single` + + - `read_in_real` in file set_inputs.f90 + + - `IO_set_kp_single` + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `IO_set_imf_by_single` + + - `IO_set_imf_bz_single` + + - `IO_set_sw_v_single` + + - `read_in_string` in file set_inputs.f90 + + - `IO_set_inputs` + + - `read_MHDIMF_Indices` + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_time` in file set_inputs.f90 + + - `read_in_time` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_int` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_satellites` in file satellites.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `Set_Euv` in file calc_euv.f90 + + - `read_in_logical` in file set_inputs.f90 + + - `read_in_real` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `IO_set_inputs` + + - `read_NGDC_Indices` + + - `read_in_string` in file set_inputs.f90 + + - `read_in_string` in file set_inputs.f90 + + - `IO_set_inputs` + + - `read_SWPC_Indices` + + - `read_in_string` in file set_inputs.f90 + + - `IO_set_inputs` + + - `read_NOAAHPI_Indices` + + - `stop_gitm` in file library.f90 + + - `time_int_to_real` in file time_routines.f90 + +- `initialize_gitm` in file **initialize.f90** + + - `init_radcooling` in file ModEarth.f90 + + - `start_timing` in file timing.f90 + + - `report` in file library.f90 + + - `time_real_to_int` in file time_routines.f90 + + - `fix_vernal_time` in file set_inputs.f90 + + - `get_f107` + + - `get_f107a` + + - `init_grid` in file init_grid.f90 + + - `read_inputs` in file read_inputs.f90 + + - `set_inputs` in file set_inputs.f90 + + - `read_restart` in file restart.f90 + + - `init_msis` in file init_msis.Earth.f90 + + - `set_RrTempInd` in file ModRates.Earth.f90 + + - `init_euv` in file calc_euv.f90 + + - `init_altitude` in file init_altitude.f90 + + - `UAM_gradient` + + - `init_heating_efficiency` in file Earth.f90 + + - `init_magheat` in file ModEarth.f90 + + - `init_isochem` in file Mars.f90 + + - `init_aerosol` in file ModEarth.f90 + + - `init_isochem` in file Mars.f90 + + - `init_msis` in file init_msis.Earth.f90 + + - `get_temperature` in file init_altitude.f90 + + - `init_iri` in file init_iri.Earth.f90 + + - `read_waccm_tides` in file tides.f90 + + - `update_waccm_tides` in file tides.f90 + + - `read_tides` in file tides.f90 + + - `update_tides` in file tides.f90 + + - `init_b0` in file init_b0.f90 + + - `init_energy_deposition` in file init_energy_deposition.f90 + + - `report` in file library.f90 + + - `SUBSOLR` + + - `exchange_messages_sphere` in file exchange_messages_sphere.f90 + + - `calc_pressure` in file calc_pressure.f90 + + - `UA_calc_electrodynamics` in file calc_electrodynamics.f90 + + - `calc_eddy_diffusion_coefficient` in file Earth.f90 + + - `calc_rates` in file calc_rates.Earth.f90 + + - `calc_viscosity` in file calc_rates.Earth.f90 + + - `calc_rates` in file calc_rates.Earth.f90 + + - `end_timing` in file timing.f90 + + - `calc_vtec` in file calc_tec.f90 + + - `calc_single_vtec` in file calc_tec.f90 + +- `write_output` in file **write_output.f90** + + - `output` in file output_common.f90 + + - `move_satellites` in file satellites.f90 + + - `write_restart` in file restart.f90 + + - `logfile` in file logfile.f90 + +- `report` in file **library.f90** + +- Loop Start + + - `calc_pressure` in file **calc_pressure.f90** + + - `report` in file library.f90 + + - `calc_timestep_vertical` in file **calc_timestep.f90** + + - `report` in file library.f90 + + - `MPI_AllREDUCE` + + - `stop_gitm` in file library.f90 + + - `calc_timestep_horizontal` in file **calc_timestep.f90** + + - `report` in file library.f90 + + - `MPI_AllREDUCE` + + - `advance` in file **advance.f90** + + - `report` in file library.f90 + + - `start_timing` in file timing.f90 + + - `update_tides` in file tides.f90 + + - `update_waccm_tides` in file tides.f90 + + - `advance_vertical_all` in file advance.f90 + + - `add_sources` in file add_sources.f90 + + - `advance_horizontal_all` in file advance.f90 + + - `time_real_to_int` in file time_routines.f90 + + - `get_f107` + + - `stop_gitm` in file library.f90 + + - `get_f107a` + + - `stop_gitm` in file library.f90 + + - `init_msis` in file init_msis.Earth.f90 + + - `init_iri` in file init_iri.Earth.f90 + + - `init_b0` in file init_b0.f90 + + - `end_timing` in file timing.f90 + + - `report` in file library.f90 + + - `start_timing` in file timing.f90 + + - `calc_rates` in file calc_rates.Earth.f90 + + - `calc_viscosity` in file calc_rates.Earth.f90 + + - `advance_vertical` in file advance_vertical.f90 + + - `end_timing` in file timing.f90 + + - `report` in file library.f90 + + - `start_timing` in file timing.f90 + + - `exchange_messages_sphere` in file + exchange_messages_sphere.f90 + + - `calc_rates` in file calc_rates.Earth.f90 + + - `calc_physics` in file calc_physics.f90 + + - `advance_horizontal` in file advance_horizontal.f90 + + - `calc_physics` in file calc_physics.f90 + + - `calc_rates` in file calc_rates.Earth.f90 + + - `advance_horizontal` in file advance_horizontal.f90 + + - `exchange_messages_sphere` in file + exchange_messages_sphere.f90 + + - `end_timing` in file timing.f90 + + - `check_stop` in file **stop_file.f90** + + - `report` in file library.f90 + + - `start_timing` in file timing.f90 + + - `MPI_AllREDUCE` + + - `check_start` in file stop_file.f90 + + - `end_timing` in file timing.f90 + + - `write_output` in file **write_output.f90** + + - `output` in file output_common.f90 + + - `move_satellites` in file satellites.f90 + + - `write_restart` in file restart.f90 + + - `logfile` in file logfile.f90 + +- Loop End + +- `finalize_gitm` in file **finalize.f90** + + - `UA_calc_electrodynamics` in file calc_electrodynamics.f90 + + - `output` in file output_common.f90 + + - `write_restart` in file restart.f90 + + - `end_timing` in file timing.f90 + + - `report_timing` in file timing.f90 + + - `UAM_XFER_destroy` in file ModSphereInterface.f90 + + - `UAM_write_error` in file ModSphereInterface.f90 + + - `stop_gitm` in file library.f90 + + - `MPI_FINALIZE` + +- `stop_gitm` in file **library.f90** + + - `CON_stop` in file main.f90 + + - `MPI_abort` diff --git a/srcDoc/devstuff/somelinks.md b/srcDoc/devstuff/somelinks.md new file mode 100644 index 00000000..176f9b12 --- /dev/null +++ b/srcDoc/devstuff/somelinks.md @@ -0,0 +1,16 @@ +# Useful Reference Links + +Here are links to some tutorials and other things that may be useful to students +or people new to GITM. + +## Aether Student Page + +Contains: + +- Editor information +- Package manager basics +- Unix commands (how to use a terminal) +- A git walkthrough + +[Link to the Aether Student Page](https://github.com/AetherModel/Aether/blob/main/doc/student.md) + diff --git a/srcDoc/grid.tex b/srcDoc/grid.tex deleted file mode 100644 index 7e6f0563..00000000 --- a/srcDoc/grid.tex +++ /dev/null @@ -1,109 +0,0 @@ -\section{Setting the Grid} -\label{grid.sec} - -Setting the grid resolution in GITM is not very complicated, but it -does involve some thought. There are a few variables that control -this. In {\tt ModSize.f90}, the following variables are defined: - -\begin{verbatim} -integer, parameter :: nLons = 9 -integer, parameter :: nLats = 9 -integer, parameter :: nAlts = 50 - -integer, parameter :: nBlocksMax = 4 -\end{verbatim} - -The first three variables (nLons, nLats and nAlts) define the size of a single block. In the example above, there are 9 cells in latitude, 9 cells in longitude and 50 cells in altitude. The latitude and longitude resolution in GITM is defined by the cell numbers specified here and the block numbers discussed in the following section. The size of the altitude cells are measured in scale heights instead of kilometers, as certain regions require higher resolutions than others based on the dominating chemical and dynamical processes. Each altitude cell contains $\frac{1}{3}$ of a scale height, starting at 80 km and typically reaching up to 500 km. Increasing the number of altitude blocks will increase the altitude range, but if this value is increased too much the model becomes unstable. This altitude limit makes it problematic to model the equatorial region during storms, where increased vertical plasma transport requires the model consider altitudes of 2000 km and higher. - -The final variable (nBlocksMax) defines the maximum number of blocks you can have on a single processor. Most people run with one single block per processor, as this is faster. So setting this to ``1'' is usually preferred, and is necessary when running with the Dynamo option on. This is a necessity because the Dynamo routine does not correctly transfer the geomagnetically oriented data into the geographic coordinates used in the ghost cells. Hopefully this will be updated in future versions, as allowing multiple blocks per node can, in theory, save memory. - -Don't forget, if you change any of these parameters you will need to recompile the code (run the Makefile again) so that a new executable using the newly defined variables can be produced. - -\subsection{Running 3D Over the Whole Globe} - -Once the number of cells is defined, then the number of blocks in latitude and longitude need to be defined. This is done in the {\tt UAM.in} file, as shown in section~\ref{uam.sec}. For example, the initial settings have 8 blocks in latitude and 8 in longitude: - -\begin{verbatim} -#GRID -8 lons -8 lats --90.0 minimum latitude to model -90.0 maximum latitude to model -0.0 minimum longitude to model -0.0 maximum longitude to model -\end{verbatim} - -The number of cells in the simulation domain will then be 72 in longitude, 72 in latitude, and 50 in altitude. Given that there are 360$\deg$ in longitude and $180\deg$ in latitude, the resolution would be $360\deg/72 = 5.0\deg$ and $180\deg/72 = 2.5\deg$ in latitude. If one block were put on each processor, 64 processors would be required. - -If one desired to run without the Dynamo turned on, the problem could also be run with multiple blocks per node. This grid fits quite nicely on either four- or eight-core processors. However, on 12-core processors this would not work very well at all. We have started to run simulations of $1\deg$ in latitude and $5\deg$ in longitude, which can fit nicely on a 12-core processor machine. For example, in {\tt ModSize.f90}: - -\begin{verbatim} -integer, parameter :: nLons = 9 -integer, parameter :: nLats = 15 -\end{verbatim} - -and in {\tt UAM.in}: - -\begin{verbatim} -#GRID -8 lons -12 lats -\end{verbatim} - -This can then run on 96 cores, which is nicely divisible by 12. Essentially, an infinite combination of cells per block and number of blocks can be utilized. Typically, the number of blocks in latitude and longitude are even numbers. - -\subsection{Running 3D Over the Part of the Globe} - -GITM can be run over part of the globe - both in latitude and in -longitude. It can be run over a single polar region (by setting -either the minimum or maximum latitude to be greater (or less) than -$\pm 90\deg$). If this is selected, message passing over the poles is -implemented. If the pole is not selected, then boundary conditions -have to be set in {\tt set\_horizontal\_bcs.f90}. By default, a -continuous gradient boundary condition is used on the densities and -temperatures, while a continuous value is used on the velocity. This -is true in both latitude and longitude. In longitude, message passing -is implemented all of the time, but the values are over-written by the -boundary conditions if the maximum and minimum longitude are not equal -to each other. - -The longitudinal resolution ($\Delta{\phi}$) is set by: -\begin{equation} -\Delta{\phi} = \frac{\phi_{end} - \phi_{start}}{nBlocksLon \times nCellsLon} -\end{equation} -while, the latitudinal resolution ($\Delta{\theta}$) is set by: -\begin{equation} -\Delta{\theta} = \frac{\theta_{end} - \theta_{start}}{nBlocksLat \times nCellsLat} -\end{equation} - -\subsection{Running in 1D} - -GITM can run in 1D mode, in which the call to advance\_horizontal is -not completed. This means that GITM runs exactly the same way, but -ignoring all of the horizontal advection terms. You have to do two -things to make GITM run in 1D. First, in {\tt ModSize.f90}: -\begin{verbatim} -integer, parameter :: nLons = 1 -integer, parameter :: nLats = 1 -integer, parameter :: nAlts = 50 - -integer, parameter :: nBlocksMax = 1 -\end{verbatim} -This tells the code that you only want one single latitude and -longitude location. To specify the exact location, in {\tt UAM.in}: -\begin{verbatim} -#GRID -1 lons -1 lats -41.75 minimum latitude to model -41.75 maximum latitude to model -275.0 minimum longitude to model -275.0 maximum longitude to model -\end{verbatim} -This is pretty close to some place in Michigan. GITM will model this -exact point for as long as you specify. One thing to keep in mind -with running in 1D is that the Earth still rotates, so the spot will -have a strong day to night variation in temperature. In 3D, the winds -decrease some of the variability between day and night, but in 1D, -this doesn't happen. So, the results are going to be perfect. But, -1D is great for debugging. diff --git a/srcDoc/index.md b/srcDoc/index.md new file mode 100644 index 00000000..265c7f7f --- /dev/null +++ b/srcDoc/index.md @@ -0,0 +1,104 @@ +# Introduction + +The Global Ionosphere Thermosphere Model (GITM) is a 3D model of the ionosphere and +thermosphere that has been applied to Earth, Venus, Mars, Jupiter, and Saturn's moon +Titan. The main repository for GITM is available on +[GitHub](https://github.com/GITMCode/GITM). The first paper describing GITM is +[here](https://www.sciencedirect.com/science/article/pii/S1364682606000071). + +## Quick Start + +If you have are confident downloading, compiling, and running codes, this is a good +place to start. A more detailed explanation can be found on the +[installation page](install.md). + +Dependencies: fortran (assuming gfortran), mpi (mpich doesn't seem to work), make, perl +(we are old school!), and python 3+. The version should not matter as long as it is +relatively recent. + +Download, configure, and run (`gfortran10` is for any gfortran version 10 or higher, +for versions 9 and lower just use `-compiler=gfortran`): + +! note + The current documentation only applies to the develop branch of GITM. + + After the seconds line below, run `git checkout develop` + + +```bash +git clone https://github.com/GITMCode/GITM.git +cd GITM +./Config.pl -install -compiler=gfortran10 -earth +make +make rundir +cd run +mpirun -np 4 ./GITM.exe +./post_process.py +``` + +Then to produce a plot: +```bash +cd UA/data +python3 ../../../srcPython/gitm_plot_simple.py -alt=250 -var=3 *bin +``` +This should produce two png files showing the density across the globe at about 250 km +altitude. This is a relatively simple plotter that will make cuts in altitude, +latitude, and longitude. They are quite basic, but this should provide some framework +for reading in GITM files and visualizing the results. More complex plotters exist, +and dome of these are described in [this document](plotters.md). + +## A Bit More Explanation + +GITM is a fortran code that uses the message passing interface (MPI) to run on multiple +processors, hence the need for a fortran compiler and MPI. If the code compiles +correctly, then the biggest issue is setting up the run. + +GITM can create a run directory for you, so you don't have to worry about the executable +and input files and everything being in the right place - it does it for you with the +'make rundir' command. This will create a directory called 'run'. You can move this +directory to where ever you want. Often the run directory is moved to a scratch disk +and renamed. For example: + +```bash +mv run /scratchdisk/mydirectory/run.gitm.event01 +ln -s /scratchdisk/mydirectory/run.gitm.event01 . +``` + +Then, within this directory, there is a file called 'UAM.in', which is what GITM reads +to set all of its parameters. + +## Basic Inputs + +This is an extremely brief description of a few settings within `UAM.in` - to understand +more, consult other pages in the documentation! Within this file, there are several +things that need to be altered when running GITM: + +- Start time, given as year, month, day, hour, minute, second. Each on its own line. +- End time, given as year, month, day, hour, minute, second. +- The grid, given as start and end latitude, start and end longitude, and the number of + blocks (processors) to use in latitude and longitude. [See this grid description for + more](internals/grid.md). +- Save plots, telling what type of plots to output (`3DALL` by default) and how often + (300s = 5 minutes). The restarts can be ignored unless you know you will need them. +- MHD_Indices - This is the the path to a file which is used as inputs to the + high-latitude electrodynamics, specifying IMF and solar wind. There are instructions + in the UAM.in file on how to produce this with the correct format. +- SME_Indices - this is the AE file that some auroral precipitation models need to + work. There are instructions in the UAM.in file on producing a file. +- Dynamo - Settings for the low-latitude dynamo. If you are running with anything better + than 5 degrees by 5 degrees resolution, turn the dynamo on! + +Once these things are set, you should be able to run GITM for the event of your +choosing. + +We provide a code in srcPython called gitm_makerun.py that will take the default UAM.in +file, change the start/end times, download IMF and AE files, and flip switches that you +may want. + +For more information on plotting, please see [the plotting description page](plotters.md). + +## The More Thorough Start + +Please see the [installation page](install.md) page for more info on how to +download, configure, and install GITM. + diff --git a/srcDoc/install.md b/srcDoc/install.md new file mode 100644 index 00000000..8c772dc7 --- /dev/null +++ b/srcDoc/install.md @@ -0,0 +1,216 @@ +# Installation + +If a fortran compiler & MPI are already installed on your system, you can skip down to +[Getting the Code](#getting-the-code). + +If you are unsure whether or not things are installed & set up correctly, a good +way to check is to print the version number with `gfortran --version` (change to +`ifort` if using the Intel compiler). The MPI implementation can be checked +with `mpirun --version`. If there is an error, something is not configured +correctly. + +## Requirements + +At a minimum, you need: + +- a Fortran compiler (gfortran, ifort, ifx, etc.) +- MPI (~~mpich~~, openmpi, mvapich, etc.) +- GNU Make (`make`) +- Python3 (most any version should work, but we have been testing with versions in the 3.10+ range) +- Perl (for configuring the code). This comes installed on most machines. + + +*[MPI]: Message Passing Interface + +On linux systems (including Windows Subsystem for Linux), gfortran is often used. This +is the most robustly tested compiler for GITM. One problem with gfortran is that the +gcc-10 and above version don't place well with MPI for some reason. A flag has to be +specified to make them play nice, and therefore there are two different compiler options +for gfortran when configuring (`-compiler=gfortran` for older versions and +`-compiler=-gfortran10` for version 10+). There is a very good chance that you have 10+. + +There is no difference in the outputs between different compilers, however some +compilers may produce slightly faster executables than others. For example, +using ifort on [Pleiades](https://www.nas.nasa.gov/hecc/resources/pleiades.html) +is faster than using gfortran (gcc) or aocc. + +As GITM can run on as many (or few) CPU cores as you wish, it is possible to run GITM on +a laptop or a workstation. This is recommended for development, as the turnaround for +test runs will be much faster. We develop GITM on 8+ core machines and can run the +default test problem of 4 processors with no problems. Most modern computers are +capable of this now. + +!!! warning "Using `conda` to install dependencies is not recommended" + + In the past, people have had very strange errors when using Anaconda to get + dependencies installed. We highly recommend you use a system-wide package manager, + or install the dependencies manually, instead of using something language-specific. + +### Linux Install Dependencies + +On an Ubuntu-based linux distribution, the following commands will download GNU Make, +the GCC Fortran compiler & Open-MPI: + +```bash +sudo apt-get install gfortran libopenmpi-dev make +``` + +Similarly, Fedora-based distributions can use: + +```bash +sudo yum install gcc-gfortran openmpi-devel +``` + +### MacOS Install Dependencies + +Installing gfortran on MacOS is most easily accomplished with a package manager like +[Homebrew](https://brew.sh/) or [MacPorts](https://www.macports.org/). It is easiest to +use a package manager, however it is also possible to install things manually. The +following steps assume you are using a package manager. + +Homebrew users will need to run: + +```bash +brew install gfortran open-mpi +``` + +And MacPorts users can run: + +```bash +sudo port install gcc[??] open-mpi +``` +> Make sure to specify a version number in place of `??` above! Use +> `port search --name --glob 'gcc*'`, or `port search gfortran` to see +> available Ports. + + +### Recommended HPC Modules + +On some computer systems, there are multiple versions of compilers, MPI, and other +things like python available. They deal with these things by making "modules". This +means that in order to compile the code, modules need to be loaded. For example, on +NASA's Pleiades computer, this line can be added to your shell startup script (.cshrc, +.zshrc, or .bashrc): + +```bash +module load comp-intel mpi-hpe +``` + +The modules that need to be loaded on different systems will differ. Feel free to +contribute to this list of recommended modules if you have experience with GITM on other +systems: + +- Pleiades + - `comp-intel` + - `mpi-hpe` +- Derecho + - `intel` + - `cray-mpich` + +Consult the documentation for each system to see which modules are available and +how to load them. The modules you use to compile GITM *may* also need to be +loaded when running, so it may be wise to set these to your defaults, or at +least take note of what was used so they can be loaded in the job script. + +## Getting the code + +GITM is hosted on GitHub. The `main` branch is stable and updated as important features +are added (in the `develop` branch). The `main` branch is default and no additional +steps are needed to use this version. Just clone the GITM repository, and all dependent +libraries will be downloaded during configuration. The following command is assuming +that you will be using GITM and not developing GITM. + +``` +git clone git@github.com:GITMCode/GITM.git +cd GITM +``` + +!!! tip + Replace `git@github.com:GITMCode/GITM.git` with + `https://github.com/GITMCode/GITM.git` if you don't have Github ssh keys set up. If + you are going to be developing GITM, you may take the time to fork the repository + (including all of the branches!), and then substitute your forked repository + location in the git clone command. If you are NOT doing development, just use this + command. + +## Configuring & Compiling + +All of the following steps assume you have not changed out of the `GITM/` directory. +Most will error if run from another location, but this will not break anything! Simply +`cd` back to `GITM/` and try again. Installation needs to be done from within `GITM/`, +then the code can be run from anywhere by moving the `run/` directory. + +This step configures the planet, compiler, and some paths GITM needs to +work properly. To configure GITM for Earth using the `gfortran` compiler, run: + +```bash +./Config.pl -install -earth -compiler=gfortran10 +``` + +!!! warning + + The above example assumes you are using gfortran + version 10+. If your gfortran version is <10 (you should upgrade your system!), + use `compiler=gfortran` + +The full list of available configuration options can be found by running +`./Config.pl -h`. A useful flag while developing is `-debug` which will print a +traceback if an error is encountered, as well as performing some additional +validity checks when running. + +This should have downloaded all necessary external libraries and created some +extra files necessary to compile. To compile, simply run: + +```bash +make +``` + +!!! tip + + Compilation can often take a while. This can be done in parallel using `make -j`, + which will use all available cores on your computer. To limit the number of cores, + for example, to 8 use `make -j8` + +If this runs without error, GITM is ready to be run! No changes are made to your system +so if errors do occur, you can remove the `GITM/` directory and try again. If trying +again does not work, you can always submit a +[bug report](https://github.com/GITMCode/GITM/issues) on GitHub. + +## Running the Code + +This will have created the executable `src/GITM.exe`. This is not where we want +to run it from, however. To create a directory where the GITM executable is run +from and organize some input files, run the command: + +```bash +make rundir +``` + +Now there should be a new directory in the GITM folder called `run/`. This +folder can be moved, copied, renamed, etc. without issue. If a study requires multiple runs of GITM, it can be most time-effective to copy or move the folder that was just created to somewhere a lot of data can be stored. For example, one could now run: +```bash +mv run /path/to/scratch/storage/thisproject/run01 +ln -s /path/to/scratch/storage/thisproject/run01 . +``` +The 'ln' command will just create a link to the run directory in the GITM directory, so you don't lose it. If you want to make yet another run directory (you can make as many as you want!), you could then do: +```bash +make rundir +mv run /path/to/scratch/storage/thisproject/run02 +ln -s /path/to/scratch/storage/thisproject/run02 . +``` + +It is now time to do some runs! The folder we just created contains a `UAM.in` +file which calls for 4 CPU cores and simulates 5 minutes in December of 2002. +This all can, of course, be adjusted later. To start this run, we first need to +`cd` into the run directory, then tell MPI to run `GITM.exe` on 4 cores. + +```bash +cd run/ +mpirun -np 4 ./GITM.exe +``` + +Twiddle your thumbs for a moment... And if no errors are reported then congratulations! You have +now run GITM! + +The next steps include exploring how to [postprocess](postprocessing.md) the +outputs, and modifying the [input files](common_inputs.md). diff --git a/srcDoc/internals/chemistry.md b/srcDoc/internals/chemistry.md new file mode 100644 index 00000000..275fdb03 --- /dev/null +++ b/srcDoc/internals/chemistry.md @@ -0,0 +1,586 @@ +# Chemistry + +Chemical reactions in GITM for Earth + +--- + +```math +\begin{align} +O_2 \rightarrow 2O +\end{align} +``` + +EUV dissociation rate. + +```math +\begin{align} +N_2 \rightarrow 2N +\end{align} +``` + +EUV dissociation rate. + +```math +\begin{align} +\begin{split} +O + O + M \rightarrow O_2 + M \\ +R = 9.59 \times 10^{-46} \times e^{\frac{480}{T_n}} +\end{split} +\end{align} +``` + +```math +\begin{align} +N_2 \rightarrow N_2^+ +\end{align} +``` + +EUV Ionization Rate. + +```math +\begin{align} +N_2 \rightarrow N_2^+ +\end{align} +``` + +Auroral Ionization Rate. + +```math +\begin{align} +O_2 \rightarrow O_2^+ +\end{align} +``` + +EUV Ionization Rate. + +```math +\begin{align} +O_2 \rightarrow O_2^+ +\end{align} +``` + +Auroral Ionization Rate. + +```math +\begin{align} +O(^3P) \rightarrow O^+(^4S) +\end{align} +``` + +EUV Ionization Rate. + +```math +\begin{align} +O(^3P) \rightarrow O^+(^2D) +\end{align} +``` + +EUV Ionization Rate. + +```math +\begin{align} +O(^3P) \rightarrow O^+(^2P) +\end{align} +``` + +EUV Ionization Rate. + +```math +\begin{align} +\begin{split} +O(^4S) \rightarrow O^+(^4S) (40\%) \\ +O(^4S) \rightarrow O^+(^2D) (40\%) \\ +O(^4S) \rightarrow O^+(^2P) (20\%) +\end{split} +\end{align} +``` + +Auroral Ionization Rate. + +```math +\begin{align} +\begin{split} +O^+(^2D) + N_2 \rightarrow N_2^+ + O + 1.33 eV \\ +R = 8.0\times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) + N_2 \rightarrow N_2^+ + O + 3.02 eV \\ +R = 4.8\times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N_2^+ + O_2 \rightarrow O_2^+ + N_2 + 3.53 eV \\ +R = 5.0\times 10^{-17} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.8} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N_2^+ + O \rightarrow NO^+ + N(^2D) + 0.7 eV \\ +R = 1.4\times 10^{-16} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.44} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N_2^+ + e^- \rightarrow 2N(^2D) + 1.04 eV \\ +R = 1.8\times 10^{-13} \times \bigg(\frac{T_e}{300}\bigg)^{-0.39} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N_2^+ + O \rightarrow O^+(^4S) + N_2 + 1.96 eV \\ +R = 1.4\times 10^{-16} \times \bigg(\frac{T_n+T_i}{600}\bigg)^{-0.44} +\end{split} +\end{align} +``` + +I am not sure that this is correct, since it is the same as 2.8. + +```math +\begin{align} +\begin{split} +N_2^2 + NO \rightarrow NO^+ + N_2 + 6.33 eV \\ +R = 4.1 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +O^+(^4S) + O_2 \rightarrow O_2^+ + O + 1.55 eV \\ +\begin{split} +R = 2.82 \times 10^{-17} \\ + & - 7.740\times 10^{-18}(T_{O2}/300.0) \\ + & + 1.073\times 10^{-18}(T_{O2}/300.0)^2 \\ + & - 5.170\times 10^{-20}(T_{O2}/300.0)^3 \\ + & + 9.650\times 10^{-22}(T_{O2}/300.0)^4 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) + O_2 \rightarrow O_2^+ + 4.865 eV \\ +R = 7.0 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N^+ + O_2 \rightarrow O_2^+ + N(^4S) + 2.486 \\ +R = 1.1 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N^+ + O_2 \rightarrow O_2^+ + N(^4D) + 0.1 \\ +R = 2.0 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O_2^+ + e^- \rightarrow O(^1D) + O(^1D) + 3.06 eV (31\%) \\ +O_2^+ + e^- \rightarrow O(^3P) + O(^1D) + 3.06 eV (42\%) \\ +O_2^+ + e^- \rightarrow O(^3P) + O(^3P) + 3.06 eV (22\%) \\ +R = 2.4\times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.7} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O_2^+ + N(^4S) \rightarrow NO^+ + O + 4.25 eV \\ +R = 1.5 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +O_2^+ + NO \rightarrow NO^+ + O_2 + 2.813 eV \\ +R = 4.6 \times 10^{-16} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O_2^+ + N_2 \rightarrow NO^+ + NO + 0.9333 eV \\ +R = 5.0 \times 10^{-22} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) + O \rightarrow O^+(^4S) + O(^3P) + 3.31 eV \\ +O^+(^2D) + O \rightarrow O^+(^4S) + O(^1D) + 1.35 eV \\ +R = 1.0 \times 10^{-17} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) + e^- \rightarrow O^+(^4S) + e^- + 3.31 eV \\ +R = 7.8 \times 10^{-14}\bigg(\frac{T_e}{300}\bigg)^{-0.5} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) + N_2 \rightarrow O^+(^4S) + N_2 + 3.31 eV \\ +R = 8.0 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) + O \rightarrow O^+(^4S) + O + 5.0 eV \\ +R = 5.2 \times 10^{-17} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) + e^- \rightarrow O^+(^4S) + e^- + 5.0 eV \\ +R = 4.0 \times 10^{-14}\bigg(\frac{T_e}{300}\bigg)^{-0.5} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) \rightarrow O^+(^4S) + 247.0nm\\ +R = 0.047 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N^+ O_2 \rightarrow O^+(^4S) + NO + 2.31 eV\\ +R = 3.0 \times 10^{-17} +\end{split} +\end{align} +``` + +--- + +```math +\begin{align} +\begin{split} +O^+(^4S) + N_2 \rightarrow NO^+ + N(^4S) + 1.10 eV \\ +T_{eff} = & T_i + \frac{M_O}{M_O + M_{N_2}}\times\frac{M_{N_2} - M_b}{3k_b}V_i^2 \\ +M_b = &\frac{M_c}{M_{mc}} \\ +M_c = & \sum_n \frac{M_n\nu_{in}}{M_n + M_O} \\ +M_{mc} = & \sum_n \frac{ \nu_{in}}{M_n + M_O} \\ +R = & 1.533\times 10^{-18} - \\ + & 5.920\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg) + \\ + & 8.600\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 \\ + (T_{eff} < 1700) \\ +R = & 2.730\times 10^{-18} - \\ + & 1.155\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg) + \\ + & 1.483\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg)^2 \\ + (T_{eff} > 1700) +\end{split} +\end{align} +``` + +If $`T_{eff} < 350`$, then $`T_{eff} = 350`$. + +If $`T_{eff} > 6000`$, then $`T_{eff} = 6000`$. + +--- + +```math +\begin{align} +\begin{split} +O^+(^4S) + O_2 \rightarrow O_2^+ + O + 1.55 eV\\ +R = & 2.820\times 10^{-17} - \\ + & 7.740\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg) + \\ + & 1.073\times 10^{-18} \bigg(\frac{T_{eff}}{300}\bigg)^2 - \\ + & 5.170\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^3 + \\ + & 9.650\times 10^{-22} \bigg(\frac{T_{eff}}{300}\bigg)^4\\ +T_{eff} = & T_i + \frac{M_O}{M_O + M_{O_2}}\times\frac{M_{O_2} - M_b}{3k_b}V_i^2 +\end{split} +\end{align} +``` + +If $`T_{eff} < 350`$, then $`T_{eff} = 350`$. + +If $`T_{eff} > 6000`$, then $`T_{eff} = 6000`$. + +```math +\begin{align} +\begin{split} +O^+(^4S) + NO \rightarrow NO^+ + O + 4.36 eV\\ +R = & 8.36\times 10^{-19} - \\ + & 2.02\times 10^{-19} \bigg(\frac{T_{eff}}{300}\bigg) + \\ + & 6.95\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 (T_{eff} < 1500)\\ +R = & 5.33\times 10^{-19} - \\ + & 1.64\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg) + \\ + & 4.72\times 10^{-20} \bigg(\frac{T_{eff}}{300}\bigg)^2 \\ + & 7.05\times 10^{-22} \bigg(\frac{T_{eff}}{300}\bigg)^3 (T_{eff} > 1500) \\ +T_{eff} = & T_i + \frac{M_O}{M_O + M_{NO}}\times\frac{M_{NO} - M_b}{3k_b}V_i^2 +\end{split} +\end{align} +``` + +If $`T_{eff} < 350`$, then $`T_{eff} = 350`$. + +If $`T_{eff} > 6000`$, then $`T_{eff} = 6000`$. + +```math +\begin{align} +\begin{split} +O^+(^4S) + N(^2D) \rightarrow N^+ + O + 1.45 eV\\ +R = 1.3 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) +e^- \rightarrow O^+(^2D) + e^- + 1.69 eV\\ +R = 1.3 \times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) \rightarrow O^+(^2D) + 732nm\\ +R = 0.171 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) \rightarrow O^+(^4S) + 372.6nm\\ +R = 7.7\times 10^{-5} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) + N_2 \rightarrow N^+ + NO + 0.70 eV\\ +R = 1.0 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+_2 + N(^2D) \rightarrow N^+ + O_2 \\ +R = 2.5 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2P) + N \rightarrow N^+ + O + 2.7 eV \\ +R = 1.0 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O^+(^2D) + N \rightarrow N^+ + O + 1.0 eV \\ +R = 7.5 \times 10^{-17} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N^+ + O_2 \rightarrow NO^+ + O(^1D) + 6.67 eV \\ +R = 2.6 \times 10^{-16} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N^+ + O \rightarrow O^+(^4S) + N + 0.93 eV \\ +R = 5.0 \times 10^{-19} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +NO^+ + e^- \rightarrow O + N(^2D) + 0.38 eV \\ +R = 4.0 \times 10^{-13} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2D) + e^- \rightarrow N(^4S) + e^- + 2.38 eV\\ +R = 5.5 \times 10^{-16} \bigg(\frac{T_e}{300}\bigg)^{-0.5} % te3m05 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2D) + O \rightarrow N(^4S) + O(^3P) + 2.38 eV (90\%)\\ +N(^2D) + O \rightarrow N(^4S) + O(^1D) + 0.42 eV (10\%)\\ +R = 2.0 \times 10^{-18} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2D) \rightarrow N(^4S) + 520nm \\ +R = 1.06 \times 10^{-5} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +NO \rightarrow N(^4S) + O \\ +R = 4.5 \times 10^{-6} e^{(-1\times 10^{-8}([O_2]\times 10^{-6})^{0.38})} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^4S) + O_2 \rightarrow NO + O + 1.385 eV \\ +R = 4.4 \times 10^{-18} e^{-\frac{3220}{T_n}} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^4S) + NO \rightarrow N_2 + O + 3.25 eV\\ +R = 1.5 \times 10^{-18} \sqrt{T_n} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2P) \rightarrow N(^2D) + 1040nm\\ +R = 7.9 \times 10^{-2} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2D) + O_2 \rightarrow NO + O(^3P) + 3.76 eV (90\%)\\ +N(^2D) + O_2 \rightarrow NO + O(^1D) + 1.80 eV (10\%)\\ +R = 6.2 \times 10^{-18} \frac{T_n}{300} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +N(^2D) + NO \rightarrow N_2 + O + 5.63 eV\\ +R = 7.0 \times 10^{-17} +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O(^1D) \rightarrow O(^3P) + 630nm\\ +R = 0.0071 +\end{split} +\end{align} +``` + +```math +\begin{align} +\begin{split} +O(^1D) \rightarrow O(^3P) + 636.4nm\\ +R = 0.0022 +\end{split} +\end{align} +``` + +I don't understand this... + +```math +\begin{align} +\begin{split} +O(^1D) + e^- \rightarrow O(^3P) + e^- + 1.96 eV\\ +R = 2.6 \times 10^{-17} T_e^(0.5)e^(-22740/T_e) +\end{split} +\end{align} +``` + +```math +\begin{align} +O(^1D) + N_2 \rightarrow O(^3P) + +\end{align} +``` \ No newline at end of file diff --git a/srcDoc/internals/electrodynamics.md b/srcDoc/internals/electrodynamics.md new file mode 100644 index 00000000..7e6c7898 --- /dev/null +++ b/srcDoc/internals/electrodynamics.md @@ -0,0 +1,194 @@ +# Electrodynamics + +GITM uses [an external library](https://github.com/gitmcode/electrodynamics.git) +for high-latitude electrodynamics. This library is automatically cloned into +`ext/Electrodynamics` when running `Config.pl`, though an update is not +attempted. + +GITM has the ability to use external auroral and/or potential models. These are +specified independently so one could, for instance, use AMIE (file-based) aurora +and Weimer potentials. + +## Specifying Electrodynamics Drivers + +The Electrodynamics models are chosen in the `#ELECTRODYNAMICS` section of +`UAM.in`. By default the values are set to: + +``` +#ELECTRODYNAMICS +zero AuroralModel +60.0 DtAurora +zero PotentialModel +60.0 DtPotential +``` + +This will cause warnings to be printed if running on Earth, as we often wish to +provide high-latitude electrodynamics drivers when modeling the Earth. However, +the run will complete. + +If, for example, one wishes to perform a scientific run using a commonsense +configuration, the recommended settings are: + +``` +#ELECTRODYNAMICS +fta AuroralModel +60.0 DtAurora +weimer05 PotentialModel +60.0 DtPotential +``` + +This will use FTA[^1] and Weimer05[^2] for the auroral and potential models, +respectively. + +[^1]: Wu, C., Ridley, A. J., DeJong, A. D., & Paxton, L. J. (2021). FTA: A Feature Tracking Empirical Model Of Auroral Precipitation. Space Weather, 19, e2020SW002629. . + +[^2]: Weimer, D. R. (2005), Improved ionospheric electrodynamic models and application to calculating Joule heating rates, J. Geophys. Res., 110, A05306, . + + +The aurora and electric field model names are parsed in +[`Electrodynamics/src/interpret_names.f90`](https://github.com/GITMCode/Electrodynamics/blob/main/src/interpret_names.f90). +See this file for the most up-to-date list of available modules and the acceptable names. + +## Aurora + +The following Auroral models are available: + +- FTA +- FRE +- PEM +- OVATION +- AMIE + +From the auroral module, GITM expects to receive Average Energy and Energy Flux, +for all of the selected auroral types. At the moment these all must be from the +same module, so one cannot use FTA for diffuse electron precipitation and AMIE +for monoenergetic electron precipitation. + +### Aurora Types + +Auroral types are specified in the `#AURORATYPES` section of `UAM.in`, and only +electron diffuse aurora are included by default: + +``` +#AURORATYPES +T UseDiffuseAurora (logical) +F UseMonoAurora (logical) +F UseWaveAurora (logical) +F UseIonAurora (logical) +``` + +Some notes on the different auroral types: + +- `NormalizeAuroraToHP` is only recommended to be used in conjunction with FRE, +- `#AURORATYPES` are not supported by all auroral models. Presently, only +OVATION & MAGNIT (AMIE) can provide other than electron diffuse aurora. +- `AllowAurWODiffuse` was added for stability with OVATION-Prime; it restricts +mono/wave/ion aurora to only exist in locations which also contain electron +diffuse aurora. This can be set in [`#AURORAMODS`](../set_inputs.md#auroramods) + +Internally, GITM represents Monoenergetic and Wave/broadband aurora with a +gaussian centered at the average energy. + +### Aurora Mods + +The diffuse aurora can be represnted by +either a Maxwellian or Kappa distribution using the `#AURORAMODS` section of +`UAM.in`: + +``` +#AURORAMODS +F NormalizeAuroraToHP (logical) +1.0 AveEFactor (real) +F IsKappaAurora (logical) +1.0 AuroraKappa (real) +F AllowAurWODiffuse (logical) +50.0 MaxAveEAurora (real) +``` + + + +## Potentials + +The following electric field models can be used: + +- Weimer05 +- Millstone-Hill +- Heppner Maynard +- AMIE + +## Required Input Files + +Each electrodynamics module has different inputs. At initialization, a +verification check will be performed where GITM ensures that all the required +input data are present and that the data file covers the entire simulation time +range. If an input file ends before the requested stop time for a run, errors +will be raised. + +The check for valid data is located within +[`Electrodynamics/src/indices_subroutines.f90`](https://github.com/GITMCode/Electrodynamics/blob/main/src/indices_subroutines.f90). +Some required input file-types are listed below: + + +| Model | IMF | AE | HP | Kp | +| :--- | :---: | :---: | :---: | :---: | +| Weimer | Yes | No | No | No | +| FRE | Yes | No | Yes | No | +| HepMay | Yes | No | No | Yes | +| FTA | No | Yes | No | No | +| PEM | No | No | Yes | No | +| Ovation | Yes | No | No | Yes | + +HP can be derived from AE, and is not necessarily required to be in a standalone +file. See [here](../common_inputs.md#sme-indices) for more details. + +## File-based Electrodynamics + +AMIE (Assimilative Mapping of Ionospheric Electrodynamics) is the name chosen +for the type of files which can be interpreted by Electrodynamics. A number of +[Python routines](https://github.com/GITMCode/Electrodynamics/tree/main/srcPython) +can be found in Electrodynamics which may be useful when generating these inputs. + +AMIE files can be used, for instance, to input custom auroral patterns into +GITM. Once could generate an AMIE file with nominal diffuse electron aurora and +several intense monoenergetic beams at any number of locations. + +## Running Electrodynamics Only + +By using the [`#STATISTICALMODELSONLY`](../set_inputs.md#statisticalmodelsonly) +option in `UAM.in`, it is possible to run any configuration of Electrodynamics +models without GITM's physics, making the runs faster. + +By setting the desired output type to [`2DGEL`](../outputs.md#2dgel), and an +appropriate Dt for `#STATISTICALMODELSONLY` and `#OUTPUT`, GITM will read in the +necessary input files and output precipitation & potential patterns using the +specified electrodynamics modules. An example of this is located in +`srcTests/auto_test/UAM.in.04.ElectrodynamicsGeoCoords.test`. + +Additionally, one can output data on a magnetic grid instead of geographic, +which is often desired when plotting outputs from the electrodynamics modules. +To do this, one must manually control the magnetic field configuration through +the use of `#APEX` and `#DIPOLE` in `UAM.in`. + +By setting `#APEX` to F, GITM will use a tilted, offset dipole for the magnetic +field. The tilt and offset are normally set automatically, however with the use +of the `#DIPOLE` option, it is possible to force zero offset and tilt, +effectively aligning the geographic and magnetic poles. The output files will +then be in magnetic coordinates, on a magnetic grid, rather than geographic. + +A complete example file for this can be found in +`srcTests/auto_test/UAM.in.05.ElectrodynamicsMagCoords.test`, where the +following sections are what differs this test from the previous: + +``` +#APEX +F Apex is turned off (so a dipole is used) + +#DIPOLE +0.0 Magnetic Pole rotation +0.0 Magnetic pole tilt +0.0 x Dipole Center +0.0 y Dipole Center +0.0 z Dipole Center + +``` + diff --git a/srcDoc/internals/grid.md b/srcDoc/internals/grid.md new file mode 100644 index 00000000..e00dad40 --- /dev/null +++ b/srcDoc/internals/grid.md @@ -0,0 +1,203 @@ +# Setting the Grid + +Setting the grid resolution in GITM is not very complicated, but it does involve +some thought. There are a few variables that control this. + +In essence, GITM's resolution is dictated by the number of CPU cores it is run +on. The number of cores must equal the product of the number of blocks in +longitude and latitude, which are both set in `UAM.in`. The resolution in the +longitudinal and latitudinal directions are, by default, 9 times the number of +blocks in each direction. + +## Important Variables + +Each CPU core that GITM is run on is considered a **block**. Within each block, +the grid is further divided into individual grid **cells**. The number of cells +per block is set before compiling, and the number of blocks to model is decided +at runtime. The number of blocks per core cannot change from 1. How many cores +GITM is run on is specified in the `UAM.in` file, and the number of cells within +each block is specified in `src/ModSize.f90`. + +### Blocks (UAM.in) + +When GITM is first creating its grid, the region of interest (usually the entire +globe) if first divided into blocks. Each block is a region that is modeled on a +single CPU core. This is the most common variable to adjust when trying to +change the resolution. + +These values are set in the `UAM.in` file and read at runtime. So the same +executable can be used for many different resolutions without needing to +recompile! + +For example, the initial settings have 2 blocks in latitude and 2 in +longitude: + + #GRID + 2 lons + 2 lats + -90.0 minimum latitude to model + 90.0 maximum latitude to model + 0.0 longitude start to model (set to 0.0 for whole Earth) + 0.0 longitude end to model (set to 0.0 for whole Earth) + +The number of CPU cores required is the product of the number of blocks in +longitude and latitude. Doubling the resolution in both latitude and longitude +requires four times as many cores since +$`(2*nLons) \times (2*nLats) = 4\times (nLons*nLats)`$. + +```math +nCPUs = (nBlocksLon) \times (nBlocksLat) +``` + + +### Cells + +In `ModSize.f90`, the following variables are defined: + +```fortran +integer, parameter :: nLons = 9 +integer, parameter :: nLats = 9 +integer, parameter :: nAlts = 50 + +integer, parameter :: nBlocksMax = 1 +``` + +The first three variables (`nLons`, `nLats` and `nAlts`) define the size of each +block. In the defaults shown above, there are 9 cells in latitude, 9 cells in +longitude and 50 altitude cells on each block. + +The final variable (`nBlocksMax`) defines the maximum number of blocks you can +have on a single processor. This is deprecated and will cause issues when set to +something other than 1. It will be removed in a future release. + +!!! note + If you change any of these parameters, you have to recompile the code. + + +## Horizontal Resolution + +The number of *total* grid cells in the examples above will then be +$`(2\times9=)18`$ in both longitude & latitude, and 50 in altitude. Given that +there are $`360^\circ`$ in longitude and $`180^\circ`$ in latitude, the +resolution would be $`360^\circ/18 = 20.0^\circ`$ in longitude and +$`180^\circ/18 =10^\circ`$ in latitude. These settings are useful for debugging +and developing, but not for production runs. + +For production runs, the resolution typically desired is $`4^\circ`$ longitude +by $`1^\circ`$ latitude. With the default values in `src/ModSize.f90`, this +requires 200 processing cores and the following values in the `UAM.in` file: + + #GRID + 10 lons + 20 lats + -90.0 minimum latitude to model + 90.0 maximum latitude to model + 0.0 longitude start to model (set to 0.0 for whole Earth) + 0.0 longitude end to model (set to 0.0 for whole Earth) + +The longitudinal resolution ($`\Delta{\phi}`$) is set by: + +```math +\Delta{\phi} = \frac{\phi_{end} - \phi_{start}}{nBlocksLon \times nCellsLon} +``` + +While the latitudinal resolution ($`\Delta{\theta}`$) is set by: + +```math +\Delta{\theta} = \frac{\theta_{end} - \theta_{start}}{nBlocksLat \times nCellsLat} +``` + +--- + +Some settings are listed below. Machines like NASA's Pleiades have a certain number of cores (processors) per node, like Ivy has 20 cores/node. An ideal setup would minimize the +unused cores on each node, while balancing runtime (increases with more cells +per block) and the number of files created (increases with more cores (blocks)). What this practically means is that it is a good idea to have the total number of processors used being a multiple of the processors/node. + +| Resolution
$`(^\circ Lon \times ^\circ Lat)`$ | Total Cores | nBlocks
(nLons x nLats) | nCells
(nLon x nLat) | +| :--- | ---- | :-----: | :----: | +| 4 x 1 | 200 | 10 x 20 | 9 x 9 | +| 4 x 1 | 360 | 10 x 36 | 9 x 5 | +| 4 x 1 | 120 | 6 x 20 | 15 x 9 | +| 4 x 1 | 180 | 9 x 20 | 10 x 9 | +| 4 x 1 | 10 | 2 x 5 | 45 x 36 | +| 2 x 0.5 | 800 | 20 x 40 | 9 x 9 | + +Experimentation may be necessary to find the parameters which work best on the +system GITM is run on. You can always increase nCells in order to run on fewer processors - GITM will just take longer to run, but should be fine. For example, the second to last line shows that GITM can run at production levels on 10 processors, which relatively high-end laptops have currently and many modern desktop machines have. + +## Running 3D Over Part of the Globe + +GITM can be run over part of the globe - both in latitude and in longitude. It +can be run over a single polar region by setting either the minimum or maximum +latitude to be greater (or less) than $`\pm 90^\circ`$). If this is selected, +message passing over the poles is implemented. For example, this simulates the entire northern polar region at $`4^\circ`$ longitude and $`1^\circ`$ latitude resolution: + #GRID + 8 lons + 4 lats + 45.0 minimum latitude to model + 90.0 maximum latitude to model + 0.0 longitude start to model (set to 0.0 for whole Earth) + 0.0 longitude end to model (set to 0.0 for whole Earth) + +If only part of the globe is selected, then boundary conditions have to be set in `set_horizontal_bcs.f90`. By default, a +continuous gradient boundary condition is used on the densities and +temperatures, while a continuous value is used on the velocity. This is true in +both latitude and longitude. + +Running in a small region does not capture the global-scale dynamics, since the EUV heating on the dayside would not be specified correctly in the regions that are not modeled. So, things like the global-scale neutral wind pattern will not be correct. This means that if the physics that you are desiring to simulate depends on things that are more global-scale, then it is not a good idea to run over an isolated region. But, if the physics is much more localized and the time-scales are significantly shorter than a day, this is a fine feature to use. Example of good and bad cases would include: + +- Good case: Exploring how an ionospheric travelling convection vortex interacts with the local thermosphere to drive strong vertical winds. +-Bad case: Exploring how to meridional neutral winds drive field-aligned flows over Michigan. + +In order to mitigate the effects of this (but not completely eliminate the effects), we have implemented a feature that allows you to use global-scale simulation results as a horizontal boundary condition for a regional simulation. In addition, GITM initializes the states with the global-scale simulation, so that you don't have to run the regional-scale simulation for a long period to get rid of the initial condition. In order to do this, you need to do the following: + +- Run one simulation over the whole globe using some nominal resolution, outputting 3DALL files at a time-scale that is appropriate for capturing the global-scale dynamics (say every 15 minutes if there is nothing of geophysical interest occuring). Remember that it is always a good idea to run 24 hours before an event in order to get rid of the initial condition! +- Post process the 3DALL files. +- Move the UA/data directory into some place like UA/GlobalScaleOutputs. +- Make a new UA/data directory. +- Modify the UAM.in file so that the grid captures the region of interest, and the start/end times align with the time of interest. Also, set the number of blocks so that you have the resolution you desire. +- Add the following line into the UAM.in file: + #GITMBCS + T + UA/GlobalScaleOutputs + +Then, when you run GITM, it will simulate only the region of interest. + +## Altitudes + +As defined in `src/ModEarth.f90`, the altitude spacing in GITM is 0.3 +scale heights. In the UAM.in file, the starting altitude is typically set to 100 km. Given that in ModSize.f90, the number of altitudes is 50 (by default), GITM simulates 15 scale heights, typically reaching up to ~500-700 km. +Increasing the number of altitudes in ModSize.f90 will increase the altitude range, but +if this value is increased too much the model may become unstable and/or inaccurate. It is also possible to reduce the starting altitude below 100 km, but decreasing it below the mesopause is not a great idea, since the physics of the mesopause (i.e., CO2 cooling) is not included in the current version of GITM. Therefore, moving the lower boundary below about 95 km is not recommended. + +## Running in 1D + +GITM can run in 1D mode, in which the call to advance_horizontal is not +completed. This means that GITM runs exactly the same way, but ignoring +all of the horizontal advection terms. You have to do two things to make +GITM run in 1D. First, in `ModSize.f90`: + + integer, parameter :: nLons = 1 + integer, parameter :: nLats = 1 + integer, parameter :: nAlts = 50 + + integer, parameter :: nBlocksMax = 1 + +This tells the code that you only want one single latitude and longitude +location. To specify the exact location, in `UAM.in`: + + #GRID + 1 lons + 1 lats + 41.75 minimum latitude to model + 41.75 maximum latitude to model + 275.0 minimum longitude to model + 275.0 maximum longitude to model + +This is some place in Michigan. GITM will model this +exact point for as long as you specify. One thing to keep in mind with +running in 1D is that the Earth still rotates, so the spot will have a +strong day to night variation in temperature and will not capture any horizontal dynamics at all, such as the horizontal neutral winds (which are primarily driven by pressure gradients). In 3D, the winds decrease +some of the variability between day and night, but in 1D, this doesn't +happen. So, the results are not going to be (even close to) perfect. But 1D is great for +debugging, since it is incredibly fast and many days can be run within a few minutes. diff --git a/srcDoc/internals/overview.md b/srcDoc/internals/overview.md new file mode 100644 index 00000000..86857e02 --- /dev/null +++ b/srcDoc/internals/overview.md @@ -0,0 +1,66 @@ +# Overview + +The Global Ionosphere Thermosphere Model (GITM) is a 3D model of the +upper atmosphere. It runs for Earth, Mars and Titan. A version is being +worked on for Jupiter. GITM solves for the coupled continuity, momentum +and energy equations of the neutrals and ions. For the ions, the time +rate of change of the velocity is ignored, so the steady-state ion flow +velocity is solved for. The ion temperature is a mixture of the electron +and neutral temperature. + +The neutrals are solved for using the Navier Stokes Equations. The +continuity equation is solved for for each major species. One of the +problems with GITM that needs to be rectified is that there are no real +tracer species, so a species is either solved for completely or is not +at all. These species can still be included in the chemistry +calculation. There is only one horizontal velocity that is computed, +while there are vertical velocities for each of the major species. A +bulk vertical velocity is calculated as a mass weighted average. The +temperature is a bulk temperature. + +## Source Terms + +Chemistry is the only real source term for the continuity equation. +Typically, diffusion is added in the continuity equation to allow for +eddy diffusion, but this is not the case in GITM. What happens is that +the vertical velocities are solved for, then a friction term is applied +to that the velocities stay very close together in the eddy diffusion +part of the code. This way, the velocities can't differ too much from +each other. Diffusion is not needed, then. + +For the horizontal momentum equation, there are the following sources: +(1) ion drag; (2) viscosity; and (3) gravity wave acceleration. For the +vertical velocity, the source terms are ion drag and friction between +the different neutral species. + +For the neutral temperature, the following source terms are included: +(1) radiative cooling; (2) EUV heating; (3) auroral heating; (4) Joule +heating; (5) conduction; and (6) chemical heating. The biggest pain for +the temperature equation is the use of a normalized temperature. This +means that the `temperature` variable in GITM does not contain the +actual temperature, it contains the temperature multiplies by +Boltzmann's Constant divided by the mean mass. This turns out to be a +factor that is very similar to the specific heat, or roughly or order +1000. In order to get the actual temperature, the variable has to be +multiplied by `temp_unit`. + +## Ghost Cells + +GITM is a parallel code. It uses a 2D domain decomposition, with the +altitude domain being the only thing that is not broken up. Blocks of +latitude and longitude are used. These blocks are then distributed among +different processors. In order to communicate between the processors, +ghostcells are used. These are cells that essentially overlap with the +neighboring block. MPI (message passing interface) is then used to move +information from one block to another, filling in the ghostcells. The +code then loops from 1-N, where the flux is calculated at the boundaries +from the 0-1 boundary to the N-N+1 boundary. A second order scheme is +used to calculate the fluxes, along with a flux limiter. Therefore, two +ghost cells are needed. + +In the vertical direction, ghost cells are also used to set boundary +conditions. The values in these cells are used to calculate the fluxes, +just as described above. Different types of boundary conditions +(constant values, constant fluxes, constant gradients, floating, zero +fluxes, etc) can be set by carefully choosing the right values in the +ghost cells. diff --git a/srcDoc/js/mermaid.min.js b/srcDoc/js/mermaid.min.js new file mode 100644 index 00000000..5243aba4 --- /dev/null +++ b/srcDoc/js/mermaid.min.js @@ -0,0 +1,2607 @@ +"use strict";var __esbuild_esm_mermaid=(()=>{var B2e=Object.create;var by=Object.defineProperty;var F2e=Object.getOwnPropertyDescriptor;var $2e=Object.getOwnPropertyNames;var z2e=Object.getPrototypeOf,G2e=Object.prototype.hasOwnProperty;var o=(t,e)=>by(t,"name",{value:e,configurable:!0});var N=(t,e)=>()=>(t&&(e=t(t=0)),e);var Mi=(t,e)=>()=>(e||t((e={exports:{}}).exports,e),e.exports),hr=(t,e)=>{for(var r in e)by(t,r,{get:e[r],enumerable:!0})},L4=(t,e,r,n)=>{if(e&&typeof e=="object"||typeof e=="function")for(let i of $2e(e))!G2e.call(t,i)&&i!==r&&by(t,i,{get:()=>e[i],enumerable:!(n=F2e(e,i))||n.enumerable});return 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ale3||Me(this.primaryColor,{h:30}),this.cScale4=this.cScale4||Me(this.primaryColor,{h:60}),this.cScale5=this.cScale5||Me(this.primaryColor,{h:90}),this.cScale6=this.cScale6||Me(this.primaryColor,{h:120}),this.cScale7=this.cScale7||Me(this.primaryColor,{h:150}),this.cScale8=this.cScale8||Me(this.primaryColor,{h:210,l:150}),this.cScale9=this.cScale9||Me(this.primaryColor,{h:270}),this.cScale10=this.cScale10||Me(this.primaryColor,{h:300}),this.cScale11=this.cScale11||Me(this.primaryColor,{h:330}),this.darkMode)for(let r=0;r{this[n]=e[n]}),this.updateColors(),r.forEach(n=>{this[n]=e[n]})}},_$=o(t=>{let e=new jC;return e.calculate(t),e},"getThemeVariables")});var KC,L$,R$=N(()=>{"use strict";Ys();o0();KC=class{static{o(this,"Theme")}constructor(){this.background="#333",this.primaryColor="#1f2020",this.secondaryColor=Dt(this.primaryColor,16),this.tertiaryColor=Me(this.primaryColor,{h:-160}),this.primaryBorderColor=wt(this.background),this.secondaryBorderColor=Ti(this.secondaryColor,this.darkMode),this.tertiaryBorderColor=Ti(this.tertiaryColor,this.darkMode),this.primaryTextColor=wt(this.primaryColor),this.secondaryTextColor=wt(this.secondaryColor),this.tertiaryTextColor=wt(this.tertiaryColor),this.lineColor=wt(this.background),this.textColor=wt(this.background),this.mainBkg="#1f2020",this.secondBkg="calculated",this.mainContrastColor="lightgrey",this.darkTextColor=Dt(wt("#323D47"),10),this.lineColor="calculated",this.border1="#ccc",this.border2=qa(255,255,255,.25),this.arrowheadColor="calculated",this.fontFamily='"trebuchet ms", verdana, arial, sans-serif',this.fontSize="16px",this.labelBackground="#181818",this.textColor="#ccc",this.THEME_COLOR_LIMIT=12,this.nodeBkg="calculated",this.nodeBorder="calculated",this.clusterBkg="calculated",this.clusterBorder="calculated",this.defaultLinkColor="calculated",this.titleColor="#F9FFFE",this.edgeLabelBackground="calculated",this.actorBorder="calculated",this.actorBkg="calculated",this.actorTextColor="calculated",this.actorLineColor="calculated",this.signalColor="calculated",this.signalTextColor="calculated",this.labelBoxBkgColor="calculated",this.labelBoxBorderColor="calculated",this.labelTextColor="calculated",this.loopTextColor="calculated",this.noteBorderColor="calculated",this.noteBkgColor="#fff5ad",this.noteTextColor="calculated",this.activationBorderColor="calculated",this.activationBkgColor="calculated",this.sequenceNumberColor="black",this.sectionBkgColor=Ot("#EAE8D9",30),this.altSectionBkgColor="calculated",this.sectionBkgColor2="#EAE8D9",this.excludeBkgColor=Ot(this.sectionBkgColor,10),this.taskBorderColor=qa(255,255,255,70),this.taskBkgColor="calculated",this.taskTextColor="calculated",this.taskTextLightColor="calculated",this.taskTextOutsideColor="calculated",this.taskTextClickableColor="#003163",this.activeTaskBorderColor=qa(255,255,255,50),this.activeTaskBkgColor="#81B1DB",this.gridColor="calculated",this.doneTaskBkgColor="calculated",this.doneTaskBorderColor="grey",this.critBorderColor="#E83737",this.critBkgColor="#E83737",this.taskTextDarkColor="calculated",this.todayLineColor="#DB5757",this.personBorder=this.primaryBorderColor,this.personBkg=this.mainBkg,this.archEdgeColor="calculated",this.archEdgeArrowColor="calculated",this.archEdgeWidth="3",this.archGroupBorderColor=this.primaryBorderColor,this.archGroupBorderWidth="2px",this.rowOdd=this.rowOdd||Dt(this.mainBkg,5)||"#ffffff",this.rowEven=this.rowEven||Ot(this.mainBkg,10),this.labelColor="calculated",this.errorBkgColor="#a44141",this.errorTextColor="#ddd"}updateColors(){this.secondBkg=Dt(this.mainBkg,16),this.lineColor=this.mainContrastColor,this.arrowheadColor=this.mainContrastColor,this.nodeBkg=this.mainBkg,this.nodeBorder=this.border1,this.clusterBkg=this.secondBkg,this.clusterBorder=this.border2,this.defaultLinkColor=this.lineColor,this.edgeLabelBackground=Dt(this.labelBackground,25),this.actorBorder=this.border1,this.actorBkg=this.mainBkg,this.actorTextColor=this.mainContrastColor,this.actorLineColor=this.actorBorder,this.signalColor=this.mainContrastColor,this.signalTextColor=this.mainContrastColor,this.labelBoxBkgColor=this.actorBkg,this.labelBoxBorderColor=this.actorBorder,this.labelTextColor=this.mainContrastColor,this.loopTextColor=this.mainContrastColor,this.noteBorderColor=this.secondaryBorderColor,this.noteBkgColor=this.secondBkg,this.noteTextColor=this.secondaryTextColor,this.activationBorderColor=this.border1,this.activationBkgColor=this.secondBkg,this.altSectionBkgColor=this.background,this.taskBkgColor=Dt(this.mainBkg,23),this.taskTextColor=this.darkTextColor,this.taskTextLightColor=this.mainContrastColor,this.taskTextOutsideColor=this.taskTextLightColor,this.gridColor=this.mainContrastColor,this.doneTaskBkgColor=this.mainContrastColor,this.taskTextDarkColor=this.darkTextColor,this.archEdgeColor=this.lineColor,this.archEdgeArrowColor=this.lineColor,this.transitionColor=this.transitionColor||this.lineColor,this.transitionLabelColor=this.transitionLabelColor||this.textColor,this.stateLabelColor=this.stateLabelColor||this.stateBkg||this.primaryTextColor,this.stateBkg=this.stateBkg||this.mainBkg,this.labelBackgroundColor=this.labelBackgroundColor||this.stateBkg,this.compositeBackground=this.compositeBackground||this.background||this.tertiaryColor,this.altBackground=this.altBackground||"#555",this.compositeTitleBackground=this.compositeTitleBackground||this.mainBkg,this.compositeBorder=this.compositeBorder||this.nodeBorder,this.innerEndBackground=this.primaryBorderColor,this.specialStateColor="#f4f4f4",this.errorBkgColor=this.errorBkgColor||this.tertiaryColor,this.errorTextColor=this.errorTextColor||this.tertiaryTextColor,this.fillType0=this.primaryColor,this.fillType1=this.secondaryColor,this.fillType2=Me(this.primaryColor,{h:64}),this.fillType3=Me(this.secondaryColor,{h:64}),this.fillType4=Me(this.primaryColor,{h:-64}),this.fillType5=Me(this.secondaryColor,{h:-64}),this.fillType6=Me(this.primaryColor,{h:128}),this.fillType7=Me(this.secondaryColor,{h:128}),this.cScale1=this.cScale1||"#0b0000",this.cScale2=this.cScale2||"#4d1037",this.cScale3=this.cScale3||"#3f5258",this.cScale4=this.cScale4||"#4f2f1b",this.cScale5=this.cScale5||"#6e0a0a",this.cScale6=this.cScale6||"#3b0048",this.cScale7=this.cScale7||"#995a01",this.cScale8=this.cScale8||"#154706",this.cScale9=this.cScale9||"#161722",this.cScale10=this.cScale10||"#00296f",this.cScale11=this.cScale11||"#01629c",this.cScale12=this.cScale12||"#010029",this.cScale0=this.cScale0||this.primaryColor,this.cScale1=this.cScale1||this.secondaryColor,this.cScale2=this.cScale2||this.tertiaryColor,this.cScale3=this.cScale3||Me(this.primaryColor,{h:30}),this.cScale4=this.cScale4||Me(this.primaryColor,{h:60}),this.cScale5=this.cScale5||Me(this.primaryColor,{h:90}),this.cScale6=this.cScale6||Me(this.primaryColor,{h:120}),this.cScale7=this.cScale7||Me(this.primaryColor,{h:150}),this.cScale8=this.cScale8||Me(this.primaryColor,{h:210}),this.cScale9=this.cScale9||Me(this.primaryColor,{h:270}),this.cScale10=this.cScale10||Me(this.primaryColor,{h:300}),this.cScale11=this.cScale11||Me(this.primaryColor,{h:330});for(let e=0;e{this[n]=e[n]}),this.updateColors(),r.forEach(n=>{this[n]=e[n]})}},L$=o(t=>{let e=new KC;return e.calculate(t),e},"getThemeVariables")});var QC,oh,_y=N(()=>{"use strict";Ys();o0();Ay();QC=class{static{o(this,"Theme")}constructor(){this.background="#f4f4f4",this.primaryColor="#ECECFF",this.secondaryColor=Me(this.primaryColor,{h:120}),this.secondaryColor="#ffffde",this.tertiaryColor=Me(this.primaryColor,{h:-160}),this.primaryBorderColor=Ti(this.primaryColor,this.darkMode),this.secondaryBorderColor=Ti(this.secondaryColor,this.darkMode),this.tertiaryBorderColor=Ti(this.tertiaryColor,this.darkMode),this.primaryTextColor=wt(this.primaryColor),this.secondaryTextColor=wt(this.secondaryColor),this.tertiaryTextColor=wt(this.tertiaryColor),this.lineColor=wt(this.background),this.textColor=wt(this.background),this.background="white",this.mainBkg="#ECECFF",this.secondBkg="#ffffde",this.lineColor="#333333",this.border1="#9370DB",this.border2="#aaaa33",this.arrowheadColor="#333333",this.fontFamily='"trebuchet ms", verdana, arial, sans-serif',this.fontSize="16px",this.labelBackground="rgba(232,232,232, 0.8)",this.textColor="#333",this.THEME_COLOR_LIMIT=12,this.nodeBkg="calculated",this.nodeBorder="calculated",this.clusterBkg="calculated",this.clusterBorder="calculated",this.defaultLinkColor="calculated",this.titleColor="calculated",this.edgeLabelBackground="calculated",this.actorBorder="calculated",this.actorBkg="calculated",this.actorTextColor="black",this.actorLineColor="calculated",this.signalColor="calculated",this.signalTextColor="calculated",this.labelBoxBkgColor="calculated",this.labelBoxBorderColor="calculated",this.labelTextColor="calculated",this.loopTextColor="calculated",this.noteBorderColor="calculated",this.noteBkgColor="#fff5ad",this.noteTextColor="calculated",this.activationBorderColor="#666",this.activationBkgColor="#f4f4f4",this.sequenceNumberColor="white",this.sectionBkgColor="calculated",this.altSectionBkgColor="calculated",this.sectionBkgColor2="calculated",this.excludeBkgColor="#eeeeee",this.taskBorderColor="calculated",this.taskBkgColor="calculated",this.taskTextLightColor="calculated",this.taskTextColor=this.taskTextLightColor,this.taskTextDarkColor="calculated",this.taskTextOutsideColor=this.taskTextDarkColor,this.taskTextClickableColor="calculated",this.activeTaskBorderColor="calculated",this.activeTaskBkgColor="calculated",this.gridColor="calculated",this.doneTaskBkgColor="calculated",this.doneTaskBorderColor="calculated",this.critBorderColor="calculated",this.critBkgColor="calculated",this.todayLineColor="calculated",this.sectionBkgColor=qa(102,102,255,.49),this.altSectionBkgColor="white",this.sectionBkgColor2="#fff400",this.taskBorderColor="#534fbc",this.taskBkgColor="#8a90dd",this.taskTextLightColor="white",this.taskTextColor="calculated",this.taskTextDarkColor="black",this.taskTextOutsideColor="calculated",this.taskTextClickableColor="#003163",this.activeTaskBorderColor="#534fbc",this.activeTaskBkgColor="#bfc7ff",this.gridColor="lightgrey",this.doneTaskBkgColor="lightgrey",this.doneTaskBorderColor="grey",this.critBorderColor="#ff8888",this.critBkgColor="red",this.todayLineColor="red",this.personBorder=this.primaryBorderColor,this.personBkg=this.mainBkg,this.archEdgeColor="calculated",this.archEdgeArrowColor="calculated",this.archEdgeWidth="3",this.archGroupBorderColor=this.primaryBorderColor,this.archGroupBorderWidth="2px",this.rowOdd="calculated",this.rowEven="calculated",this.labelColor="black",this.errorBkgColor="#552222",this.errorTextColor="#552222",this.updateColors()}updateColors(){this.cScale0=this.cScale0||this.primaryColor,this.cScale1=this.cScale1||this.secondaryColor,this.cScale2=this.cScale2||this.tertiaryColor,this.cScale3=this.cScale3||Me(this.primaryColor,{h:30}),this.cScale4=this.cScale4||Me(this.primaryColor,{h:60}),this.cScale5=this.cScale5||Me(this.primaryColor,{h:90}),this.cScale6=this.cScale6||Me(this.primaryColor,{h:120}),this.cScale7=this.cScale7||Me(this.primaryColor,{h:150}),this.cScale8=this.cScale8||Me(this.primaryColor,{h:210}),this.cScale9=this.cScale9||Me(this.primaryColor,{h:270}),this.cScale10=this.cScale10||Me(this.primaryColor,{h:300}),this.cScale11=this.cScale11||Me(this.primaryColor,{h:330}),this.cScalePeer1=this.cScalePeer1||Ot(this.secondaryColor,45),this.cScalePeer2=this.cScalePeer2||Ot(this.tertiaryColor,40);for(let e=0;e{this[n]==="calculated"&&(this[n]=void 0)}),typeof e!="object"){this.updateColors();return}let r=Object.keys(e);r.forEach(n=>{this[n]=e[n]}),this.updateColors(),r.forEach(n=>{this[n]=e[n]})}},oh=o(t=>{let e=new QC;return e.calculate(t),e},"getThemeVariables")});var ZC,N$,M$=N(()=>{"use strict";Ys();Ay();o0();ZC=class{static{o(this,"Theme")}constructor(){this.background="#f4f4f4",this.primaryColor="#cde498",this.secondaryColor="#cdffb2",this.background="white",this.mainBkg="#cde498",this.secondBkg="#cdffb2",this.lineColor="green",this.border1="#13540c",this.border2="#6eaa49",this.arrowheadColor="green",this.fontFamily='"trebuchet ms", verdana, arial, sans-serif',this.fontSize="16px",this.tertiaryColor=Dt("#cde498",10),this.primaryBorderColor=Ti(this.primaryColor,this.darkMode),this.secondaryBorderColor=Ti(this.secondaryColor,this.darkMode),this.tertiaryBorderColor=Ti(this.tertiaryColor,this.darkMode),this.primaryTextColor=wt(this.primaryColor),this.secondaryTextColor=wt(this.secondaryColor),this.tertiaryTextColor=wt(this.primaryColor),this.lineColor=wt(this.background),this.textColor=wt(this.background),this.THEME_COLOR_LIMIT=12,this.nodeBkg="calculated",this.nodeBorder="calculated",this.clusterBkg="calculated",this.clusterBorder="calculated",this.defaultLinkColor="calculated",this.titleColor="#333",this.edgeLabelBackground="#e8e8e8",this.actorBorder="calculated",this.actorBkg="calculated",this.actorTextColor="black",this.actorLineColor="calculated",this.signalColor="#333",this.signalTextColor="#333",this.labelBoxBkgColor="calculated",this.labelBoxBorderColor="#326932",this.labelTextColor="calculated",this.loopTextColor="calculated",this.noteBorderColor="calculated",this.noteBkgColor="#fff5ad",this.noteTextColor="calculated",this.activationBorderColor="#666",this.activationBkgColor="#f4f4f4",this.sequenceNumberColor="white",this.sectionBkgColor="#6eaa49",this.altSectionBkgColor="white",this.sectionBkgColor2="#6eaa49",this.excludeBkgColor="#eeeeee",this.taskBorderColor="calculated",this.taskBkgColor="#487e3a",this.taskTextLightColor="white",this.taskTextColor="calculated",this.taskTextDarkColor="black",this.taskTextOutsideColor="calculated",this.taskTextClickableColor="#003163",this.activeTaskBorderColor="calculated",this.activeTaskBkgColor="calculated",this.gridColor="lightgrey",this.doneTaskBkgColor="lightgrey",this.doneTaskBorderColor="grey",this.critBorderColor="#ff8888",this.critBkgColor="red",this.todayLineColor="red",this.personBorder=this.primaryBorderColor,this.personBkg=this.mainBkg,this.archEdgeColor="calculated",this.archEdgeArrowColor="calculated",this.archEdgeWidth="3",this.archGroupBorderColor=this.primaryBorderColor,this.archGroupBorderWidth="2px",this.labelColor="black",this.errorBkgColor="#552222",this.errorTextColor="#552222"}updateColors(){this.actorBorder=Ot(this.mainBkg,20),this.actorBkg=this.mainBkg,this.labelBoxBkgColor=this.actorBkg,this.labelTextColor=this.actorTextColor,this.loopTextColor=this.actorTextColor,this.noteBorderColor=this.border2,this.noteTextColor=this.actorTextColor,this.actorLineColor=this.actorBorder,this.cScale0=this.cScale0||this.primaryColor,this.cScale1=this.cScale1||this.secondaryColor,this.cScale2=this.cScale2||this.tertiaryColor,this.cScale3=this.cScale3||Me(this.primaryColor,{h:30}),this.cScale4=this.cScale4||Me(this.primaryColor,{h:60}),this.cScale5=this.cScale5||Me(this.primaryColor,{h:90}),this.cScale6=this.cScale6||Me(this.primaryColor,{h:120}),this.cScale7=this.cScale7||Me(this.primaryColor,{h:150}),this.cScale8=this.cScale8||Me(this.primaryColor,{h:210}),this.cScale9=this.cScale9||Me(this.primaryColor,{h:270}),this.cScale10=this.cScale10||Me(this.primaryColor,{h:300}),this.cScale11=this.cScale11||Me(this.primaryColor,{h:330}),this.cScalePeer1=this.cScalePeer1||Ot(this.secondaryColor,45),this.cScalePeer2=this.cScalePeer2||Ot(this.tertiaryColor,40);for(let 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this.expect("}"),this.nextToken=r,n}parseExpression(e,r){for(var n=[];;){this.mode==="math"&&this.consumeSpaces();var i=this.fetch();if(t.endOfExpression.indexOf(i.text)!==-1||r&&i.text===r||e&&hh[i.text]&&hh[i.text].infix)break;var a=this.parseAtom(r);if(a){if(a.type==="internal")continue}else break;n.push(a)}return this.mode==="text"&&this.formLigatures(n),this.handleInfixNodes(n)}handleInfixNodes(e){for(var r=-1,n,i=0;i=0&&this.settings.reportNonstrict("unicodeTextInMathMode",'Latin-1/Unicode text character "'+r[0]+'" used in math mode',e);var l=An[this.mode][r].group,u=Xs.range(e),h;if(Mbe.hasOwnProperty(l)){var f=l;h={type:"atom",mode:this.mode,family:f,loc:u,text:r}}else h={type:l,mode:this.mode,loc:u,text:r};s=h}else if(r.charCodeAt(0)>=128)this.settings.strict&&($z(r.charCodeAt(0))?this.mode==="math"&&this.settings.reportNonstrict("unicodeTextInMathMode",'Unicode text character "'+r[0]+'" used in math mode',e):this.settings.reportNonstrict("unknownSymbol",'Unrecognized Unicode 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i=f2(n,"#");(this.options.pedantic||!i||this.rules.other.endingSpaceChar.test(i))&&(n=i.trim())}return{type:"heading",raw:r[0],depth:r[1].length,text:n,tokens:this.lexer.inline(n)}}}hr(e){let r=this.rules.block.hr.exec(e);if(r)return{type:"hr",raw:f2(r[0],` +`)}}blockquote(e){let r=this.rules.block.blockquote.exec(e);if(r){let n=f2(r[0],` +`).split(` +`),i="",a="",s=[];for(;n.length>0;){let l=!1,u=[],h;for(h=0;h1,a={type:"list",raw:"",ordered:i,start:i?+n.slice(0,-1):"",loose:!1,items:[]};n=i?`\\d{1,9}\\${n.slice(-1)}`:`\\${n}`,this.options.pedantic&&(n=i?n:"[*+-]");let s=this.rules.other.listItemRegex(n),l=!1;for(;e;){let h=!1,f="",d="";if(!(r=s.exec(e))||this.rules.block.hr.test(e))break;f=r[0],e=e.substring(f.length);let p=r[2].split(` +`,1)[0].replace(this.rules.other.listReplaceTabs,b=>" ".repeat(3*b.length)),m=e.split(` +`,1)[0],g=!p.trim(),y=0;if(this.options.pedantic?(y=2,d=p.trimStart()):g?y=r[1].length+1:(y=r[2].search(this.rules.other.nonSpaceChar),y=y>4?1:y,d=p.slice(y),y+=r[1].length),g&&this.rules.other.blankLine.test(m)&&(f+=m+` +`,e=e.substring(m.length+1),h=!0),!h){let b=this.rules.other.nextBulletRegex(y),w=this.rules.other.hrRegex(y),C=this.rules.other.fencesBeginRegex(y),T=this.rules.other.headingBeginRegex(y),E=this.rules.other.htmlBeginRegex(y);for(;e;){let A=e.split(` +`,1)[0],S;if(m=A,this.options.pedantic?(m=m.replace(this.rules.other.listReplaceNesting," "),S=m):S=m.replace(this.rules.other.tabCharGlobal," "),C.test(m)||T.test(m)||E.test(m)||b.test(m)||w.test(m))break;if(S.search(this.rules.other.nonSpaceChar)>=y||!m.trim())d+=` +`+S.slice(y);else{if(g||p.replace(this.rules.other.tabCharGlobal," ").search(this.rules.other.nonSpaceChar)>=4||C.test(p)||T.test(p)||w.test(p))break;d+=` +`+m}!g&&!m.trim()&&(g=!0),f+=A+` +`,e=e.substring(A.length+1),p=S.slice(y)}}a.loose||(l?a.loose=!0:this.rules.other.doubleBlankLine.test(f)&&(l=!0));let v=null,x;this.options.gfm&&(v=this.rules.other.listIsTask.exec(d),v&&(x=v[0]!=="[ ] ",d=d.replace(this.rules.other.listReplaceTask,""))),a.items.push({type:"list_item",raw:f,task:!!v,checked:x,loose:!1,text:d,tokens:[]}),a.raw+=f}let u=a.items.at(-1);if(u)u.raw=u.raw.trimEnd(),u.text=u.text.trimEnd();else return;a.raw=a.raw.trimEnd();for(let h=0;hp.type==="space"),d=f.length>0&&f.some(p=>this.rules.other.anyLine.test(p.raw));a.loose=d}if(a.loose)for(let h=0;h({text:u,tokens:this.lexer.inline(u),header:!1,align:s.align[h]})));return s}}lheading(e){let r=this.rules.block.lheading.exec(e);if(r)return{type:"heading",raw:r[0],depth:r[2].charAt(0)==="="?1:2,text:r[1],tokens:this.lexer.inline(r[1])}}paragraph(e){let r=this.rules.block.paragraph.exec(e);if(r){let n=r[1].charAt(r[1].length-1)===` +`?r[1].slice(0,-1):r[1];return{type:"paragraph",raw:r[0],text:n,tokens:this.lexer.inline(n)}}}text(e){let r=this.rules.block.text.exec(e);if(r)return{type:"text",raw:r[0],text:r[0],tokens:this.lexer.inline(r[0])}}escape(e){let r=this.rules.inline.escape.exec(e);if(r)return{type:"escape",raw:r[0],text:r[1]}}tag(e){let r=this.rules.inline.tag.exec(e);if(r)return!this.lexer.state.inLink&&this.rules.other.startATag.test(r[0])?this.lexer.state.inLink=!0:this.lexer.state.inLink&&this.rules.other.endATag.test(r[0])&&(this.lexer.state.inLink=!1),!this.lexer.state.inRawBlock&&this.rules.other.startPreScriptTag.test(r[0])?this.lexer.state.inRawBlock=!0:this.lexer.state.inRawBlock&&this.rules.other.endPreScriptTag.test(r[0])&&(this.lexer.state.inRawBlock=!1),{type:"html",raw:r[0],inLink:this.lexer.state.inLink,inRawBlock:this.lexer.state.inRawBlock,block:!1,text:r[0]}}link(e){let r=this.rules.inline.link.exec(e);if(r){let n=r[2].trim();if(!this.options.pedantic&&this.rules.other.startAngleBracket.test(n)){if(!this.rules.other.endAngleBracket.test(n))return;let s=f2(n.slice(0,-1),"\\");if((n.length-s.length)%2===0)return}else{let s=$8e(r[2],"()");if(s>-1){let u=(r[0].indexOf("!")===0?5:4)+r[1].length+s;r[2]=r[2].substring(0,s),r[0]=r[0].substring(0,u).trim(),r[3]=""}}let i=r[2],a="";if(this.options.pedantic){let s=this.rules.other.pedanticHrefTitle.exec(i);s&&(i=s[1],a=s[3])}else a=r[3]?r[3].slice(1,-1):"";return i=i.trim(),this.rules.other.startAngleBracket.test(i)&&(this.options.pedantic&&!this.rules.other.endAngleBracket.test(n)?i=i.slice(1):i=i.slice(1,-1)),zj(r,{href:i&&i.replace(this.rules.inline.anyPunctuation,"$1"),title:a&&a.replace(this.rules.inline.anyPunctuation,"$1")},r[0],this.lexer,this.rules)}}reflink(e,r){let n;if((n=this.rules.inline.reflink.exec(e))||(n=this.rules.inline.nolink.exec(e))){let i=(n[2]||n[1]).replace(this.rules.other.multipleSpaceGlobal," "),a=r[i.toLowerCase()];if(!a){let s=n[0].charAt(0);return{type:"text",raw:s,text:s}}return zj(n,a,n[0],this.lexer,this.rules)}}emStrong(e,r,n=""){let i=this.rules.inline.emStrongLDelim.exec(e);if(!i||i[3]&&n.match(this.rules.other.unicodeAlphaNumeric))return;if(!(i[1]||i[2]||"")||!n||this.rules.inline.punctuation.exec(n)){let s=[...i[0]].length-1,l,u,h=s,f=0,d=i[0][0]==="*"?this.rules.inline.emStrongRDelimAst:this.rules.inline.emStrongRDelimUnd;for(d.lastIndex=0,r=r.slice(-1*e.length+s);(i=d.exec(r))!=null;){if(l=i[1]||i[2]||i[3]||i[4]||i[5]||i[6],!l)continue;if(u=[...l].length,i[3]||i[4]){h+=u;continue}else if((i[5]||i[6])&&s%3&&!((s+u)%3)){f+=u;continue}if(h-=u,h>0)continue;u=Math.min(u,u+h+f);let p=[...i[0]][0].length,m=e.slice(0,s+i.index+p+u);if(Math.min(s,u)%2){let y=m.slice(1,-1);return{type:"em",raw:m,text:y,tokens:this.lexer.inlineTokens(y)}}let g=m.slice(2,-2);return{type:"strong",raw:m,text:g,tokens:this.lexer.inlineTokens(g)}}}}codespan(e){let r=this.rules.inline.code.exec(e);if(r){let n=r[2].replace(this.rules.other.newLineCharGlobal," "),i=this.rules.other.nonSpaceChar.test(n),a=this.rules.other.startingSpaceChar.test(n)&&this.rules.other.endingSpaceChar.test(n);return i&&a&&(n=n.substring(1,n.length-1)),{type:"codespan",raw:r[0],text:n}}}br(e){let r=this.rules.inline.br.exec(e);if(r)return{type:"br",raw:r[0]}}del(e){let r=this.rules.inline.del.exec(e);if(r)return{type:"del",raw:r[0],text:r[2],tokens:this.lexer.inlineTokens(r[2])}}autolink(e){let r=this.rules.inline.autolink.exec(e);if(r){let n,i;return r[2]==="@"?(n=r[1],i="mailto:"+n):(n=r[1],i=n),{type:"link",raw:r[0],text:n,href:i,tokens:[{type:"text",raw:n,text:n}]}}}url(e){let r;if(r=this.rules.inline.url.exec(e)){let n,i;if(r[2]==="@")n=r[0],i="mailto:"+n;else{let a;do a=r[0],r[0]=this.rules.inline._backpedal.exec(r[0])?.[0]??"";while(a!==r[0]);n=r[0],r[1]==="www."?i="http://"+r[0]:i=r[0]}return{type:"link",raw:r[0],text:n,href:i,tokens:[{type:"text",raw:n,text:n}]}}}inlineText(e){let r=this.rules.inline.text.exec(e);if(r){let n=this.lexer.state.inRawBlock;return{type:"text",raw:r[0],text:r[0],escaped:n}}}},Al=class t{static{o(this,"_Lexer")}tokens;options;state;tokenizer;inlineQueue;constructor(e){this.tokens=[],this.tokens.links=Object.create(null),this.options=e||Id,this.options.tokenizer=this.options.tokenizer||new hm,this.tokenizer=this.options.tokenizer,this.tokenizer.options=this.options,this.tokenizer.lexer=this,this.inlineQueue=[],this.state={inLink:!1,inRawBlock:!1,top:!0};let r={other:ts,block:Sw.normal,inline:h2.normal};this.options.pedantic?(r.block=Sw.pedantic,r.inline=h2.pedantic):this.options.gfm&&(r.block=Sw.gfm,this.options.breaks?r.inline=h2.breaks:r.inline=h2.gfm),this.tokenizer.rules=r}static get rules(){return{block:Sw,inline:h2}}static lex(e,r){return new t(r).lex(e)}static lexInline(e,r){return new t(r).inlineTokens(e)}lex(e){e=e.replace(ts.carriageReturn,` +`),this.blockTokens(e,this.tokens);for(let r=0;r(i=s.call({lexer:this},e,r))?(e=e.substring(i.raw.length),r.push(i),!0):!1))continue;if(i=this.tokenizer.space(e)){e=e.substring(i.raw.length);let s=r.at(-1);i.raw.length===1&&s!==void 0?s.raw+=` +`:r.push(i);continue}if(i=this.tokenizer.code(e)){e=e.substring(i.raw.length);let s=r.at(-1);s?.type==="paragraph"||s?.type==="text"?(s.raw+=` +`+i.raw,s.text+=` +`+i.text,this.inlineQueue.at(-1).src=s.text):r.push(i);continue}if(i=this.tokenizer.fences(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.heading(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.hr(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.blockquote(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.list(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.html(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.def(e)){e=e.substring(i.raw.length);let s=r.at(-1);s?.type==="paragraph"||s?.type==="text"?(s.raw+=` +`+i.raw,s.text+=` +`+i.raw,this.inlineQueue.at(-1).src=s.text):this.tokens.links[i.tag]||(this.tokens.links[i.tag]={href:i.href,title:i.title});continue}if(i=this.tokenizer.table(e)){e=e.substring(i.raw.length),r.push(i);continue}if(i=this.tokenizer.lheading(e)){e=e.substring(i.raw.length),r.push(i);continue}let a=e;if(this.options.extensions?.startBlock){let s=1/0,l=e.slice(1),u;this.options.extensions.startBlock.forEach(h=>{u=h.call({lexer:this},l),typeof u=="number"&&u>=0&&(s=Math.min(s,u))}),s<1/0&&s>=0&&(a=e.substring(0,s+1))}if(this.state.top&&(i=this.tokenizer.paragraph(a))){let s=r.at(-1);n&&s?.type==="paragraph"?(s.raw+=` +`+i.raw,s.text+=` +`+i.text,this.inlineQueue.pop(),this.inlineQueue.at(-1).src=s.text):r.push(i),n=a.length!==e.length,e=e.substring(i.raw.length);continue}if(i=this.tokenizer.text(e)){e=e.substring(i.raw.length);let s=r.at(-1);s?.type==="text"?(s.raw+=` +`+i.raw,s.text+=` +`+i.text,this.inlineQueue.pop(),this.inlineQueue.at(-1).src=s.text):r.push(i);continue}if(e){let s="Infinite loop on byte: "+e.charCodeAt(0);if(this.options.silent){console.error(s);break}else throw new Error(s)}}return this.state.top=!0,r}inline(e,r=[]){return this.inlineQueue.push({src:e,tokens:r}),r}inlineTokens(e,r=[]){let n=e,i=null;if(this.tokens.links){let l=Object.keys(this.tokens.links);if(l.length>0)for(;(i=this.tokenizer.rules.inline.reflinkSearch.exec(n))!=null;)l.includes(i[0].slice(i[0].lastIndexOf("[")+1,-1))&&(n=n.slice(0,i.index)+"["+"a".repeat(i[0].length-2)+"]"+n.slice(this.tokenizer.rules.inline.reflinkSearch.lastIndex))}for(;(i=this.tokenizer.rules.inline.blockSkip.exec(n))!=null;)n=n.slice(0,i.index)+"["+"a".repeat(i[0].length-2)+"]"+n.slice(this.tokenizer.rules.inline.blockSkip.lastIndex);for(;(i=this.tokenizer.rules.inline.anyPunctuation.exec(n))!=null;)n=n.slice(0,i.index)+"++"+n.slice(this.tokenizer.rules.inline.anyPunctuation.lastIndex);let a=!1,s="";for(;e;){a||(s=""),a=!1;let l;if(this.options.extensions?.inline?.some(h=>(l=h.call({lexer:this},e,r))?(e=e.substring(l.raw.length),r.push(l),!0):!1))continue;if(l=this.tokenizer.escape(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.tag(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.link(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.reflink(e,this.tokens.links)){e=e.substring(l.raw.length);let h=r.at(-1);l.type==="text"&&h?.type==="text"?(h.raw+=l.raw,h.text+=l.text):r.push(l);continue}if(l=this.tokenizer.emStrong(e,n,s)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.codespan(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.br(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.del(e)){e=e.substring(l.raw.length),r.push(l);continue}if(l=this.tokenizer.autolink(e)){e=e.substring(l.raw.length),r.push(l);continue}if(!this.state.inLink&&(l=this.tokenizer.url(e))){e=e.substring(l.raw.length),r.push(l);continue}let u=e;if(this.options.extensions?.startInline){let h=1/0,f=e.slice(1),d;this.options.extensions.startInline.forEach(p=>{d=p.call({lexer:this},f),typeof d=="number"&&d>=0&&(h=Math.min(h,d))}),h<1/0&&h>=0&&(u=e.substring(0,h+1))}if(l=this.tokenizer.inlineText(u)){e=e.substring(l.raw.length),l.raw.slice(-1)!=="_"&&(s=l.raw.slice(-1)),a=!0;let h=r.at(-1);h?.type==="text"?(h.raw+=l.raw,h.text+=l.text):r.push(l);continue}if(e){let h="Infinite loop on byte: "+e.charCodeAt(0);if(this.options.silent){console.error(h);break}else throw new Error(h)}}return r}},fm=class{static{o(this,"_Renderer")}options;parser;constructor(e){this.options=e||Id}space(e){return""}code({text:e,lang:r,escaped:n}){let i=(r||"").match(ts.notSpaceStart)?.[0],a=e.replace(ts.endingNewline,"")+` +`;return i?'
'+(n?a:pc(a,!0))+`
+`:"
"+(n?a:pc(a,!0))+`
+`}blockquote({tokens:e}){return`
+${this.parser.parse(e)}
+`}html({text:e}){return e}heading({tokens:e,depth:r}){return`${this.parser.parseInline(e)} +`}hr(e){return`
+`}list(e){let r=e.ordered,n=e.start,i="";for(let l=0;l +`+i+" +`}listitem(e){let r="";if(e.task){let n=this.checkbox({checked:!!e.checked});e.loose?e.tokens[0]?.type==="paragraph"?(e.tokens[0].text=n+" "+e.tokens[0].text,e.tokens[0].tokens&&e.tokens[0].tokens.length>0&&e.tokens[0].tokens[0].type==="text"&&(e.tokens[0].tokens[0].text=n+" "+pc(e.tokens[0].tokens[0].text),e.tokens[0].tokens[0].escaped=!0)):e.tokens.unshift({type:"text",raw:n+" ",text:n+" ",escaped:!0}):r+=n+" "}return r+=this.parser.parse(e.tokens,!!e.loose),`
  • ${r}
  • +`}checkbox({checked:e}){return"'}paragraph({tokens:e}){return`

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70:this.$=ye[Te-3],lt.addVertex(ye[Te-3],ye[Te-1],"lean_right");break;case 71:this.$=ye[Te-3],lt.addVertex(ye[Te-3],ye[Te-1],"lean_left");break;case 72:this.$=ye[Te],lt.addVertex(ye[Te]);break;case 73:ye[Te-1].text=ye[Te],this.$=ye[Te-1];break;case 74:case 75:ye[Te-2].text=ye[Te-1],this.$=ye[Te-2];break;case 76:this.$=ye[Te];break;case 77:var wi=lt.destructLink(ye[Te],ye[Te-2]);this.$={type:wi.type,stroke:wi.stroke,length:wi.length,text:ye[Te-1]};break;case 78:var wi=lt.destructLink(ye[Te],ye[Te-2]);this.$={type:wi.type,stroke:wi.stroke,length:wi.length,text:ye[Te-1],id:ye[Te-3]};break;case 79:this.$={text:ye[Te],type:"text"};break;case 80:this.$={text:ye[Te-1].text+""+ye[Te],type:ye[Te-1].type};break;case 81:this.$={text:ye[Te],type:"string"};break;case 82:this.$={text:ye[Te],type:"markdown"};break;case 83:var wi=lt.destructLink(ye[Te]);this.$={type:wi.type,stroke:wi.stroke,length:wi.length};break;case 84:var wi=lt.destructLink(ye[Te]);this.$={type:wi.type,stroke:wi.stroke,length:wi.length,id:ye[Te-1]};break;case 85:this.$=ye[Te-1];break;case 86:this.$={text:ye[Te],type:"text"};break;case 87:this.$={text:ye[Te-1].text+""+ye[Te],type:ye[Te-1].type};break;case 88:this.$={text:ye[Te],type:"string"};break;case 89:case 104:this.$={text:ye[Te],type:"markdown"};break;case 101:this.$={text:ye[Te],type:"text"};break;case 102:this.$={text:ye[Te-1].text+""+ye[Te],type:ye[Te-1].type};break;case 103:this.$={text:ye[Te],type:"text"};break;case 105:this.$=ye[Te-4],lt.addClass(ye[Te-2],ye[Te]);break;case 106:this.$=ye[Te-4],lt.setClass(ye[Te-2],ye[Te]);break;case 107:case 115:this.$=ye[Te-1],lt.setClickEvent(ye[Te-1],ye[Te]);break;case 108:case 116:this.$=ye[Te-3],lt.setClickEvent(ye[Te-3],ye[Te-2]),lt.setTooltip(ye[Te-3],ye[Te]);break;case 109:this.$=ye[Te-2],lt.setClickEvent(ye[Te-2],ye[Te-1],ye[Te]);break;case 110:this.$=ye[Te-4],lt.setClickEvent(ye[Te-4],ye[Te-3],ye[Te-2]),lt.setTooltip(ye[Te-4],ye[Te]);break;case 111:this.$=ye[Te-2],lt.setLink(ye[Te-2],ye[Te]);break;case 112:this.$=ye[Te-4],lt.setLink(ye[Te-4],ye[Te-2]),lt.setTooltip(ye[Te-4],ye[Te]);break;case 113:this.$=ye[Te-4],lt.setLink(ye[Te-4],ye[Te-2],ye[Te]);break;case 114:this.$=ye[Te-6],lt.setLink(ye[Te-6],ye[Te-4],ye[Te]),lt.setTooltip(ye[Te-6],ye[Te-2]);break;case 117:this.$=ye[Te-1],lt.setLink(ye[Te-1],ye[Te]);break;case 118:this.$=ye[Te-3],lt.setLink(ye[Te-3],ye[Te-2]),lt.setTooltip(ye[Te-3],ye[Te]);break;case 119:this.$=ye[Te-3],lt.setLink(ye[Te-3],ye[Te-2],ye[Te]);break;case 120:this.$=ye[Te-5],lt.setLink(ye[Te-5],ye[Te-4],ye[Te]),lt.setTooltip(ye[Te-5],ye[Te-2]);break;case 121:this.$=ye[Te-4],lt.addVertex(ye[Te-2],void 0,void 0,ye[Te]);break;case 122:this.$=ye[Te-4],lt.updateLink([ye[Te-2]],ye[Te]);break;case 123:this.$=ye[Te-4],lt.updateLink(ye[Te-2],ye[Te]);break;case 124:this.$=ye[Te-8],lt.updateLinkInterpolate([ye[Te-6]],ye[Te-2]),lt.updateLink([ye[Te-6]],ye[Te]);break;case 125:this.$=ye[Te-8],lt.updateLinkInterpolate(ye[Te-6],ye[Te-2]),lt.updateLink(ye[Te-6],ye[Te]);break;case 126:this.$=ye[Te-6],lt.updateLinkInterpolate([ye[Te-4]],ye[Te]);break;case 127:this.$=ye[Te-6],lt.updateLinkInterpolate(ye[Te-4],ye[Te]);break;case 128:case 130:this.$=[ye[Te]];break;case 129:case 131:ye[Te-2].push(ye[Te]),this.$=ye[Te-2];break;case 133:this.$=ye[Te-1]+ye[Te];break;case 181:this.$=ye[Te];break;case 182:this.$=ye[Te-1]+""+ye[Te];break;case 184:this.$=ye[Te-1]+""+ye[Te];break;case 185:this.$={stmt:"dir",value:"TB"};break;case 186:this.$={stmt:"dir",value:"BT"};break;case 187:this.$={stmt:"dir",value:"RL"};break;case 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this.yy=mt||this.yy||{},this._input=et,this._more=this._backtrack=this.done=!1,this.yylineno=this.yyleng=0,this.yytext=this.matched=this.match="",this.conditionStack=["INITIAL"],this.yylloc={first_line:1,first_column:0,last_line:1,last_column:0},this.options.ranges&&(this.yylloc.range=[0,0]),this.offset=0,this},"setInput"),input:o(function(){var et=this._input[0];this.yytext+=et,this.yyleng++,this.offset++,this.match+=et,this.matched+=et;var mt=et.match(/(?:\r\n?|\n).*/g);return mt?(this.yylineno++,this.yylloc.last_line++):this.yylloc.last_column++,this.options.ranges&&this.yylloc.range[1]++,this._input=this._input.slice(1),et},"input"),unput:o(function(et){var mt=et.length,Kt=et.split(/(?:\r\n?|\n)/g);this._input=et+this._input,this.yytext=this.yytext.substr(0,this.yytext.length-mt),this.offset-=mt;var lt=this.match.split(/(?:\r\n?|\n)/g);this.match=this.match.substr(0,this.match.length-1),this.matched=this.matched.substr(0,this.matched.length-1),Kt.length-1&&(this.yylineno-=Kt.length-1);var Cn=this.yylloc.range;return this.yylloc={first_line:this.yylloc.first_line,last_line:this.yylineno+1,first_column:this.yylloc.first_column,last_column:Kt?(Kt.length===lt.length?this.yylloc.first_column:0)+lt[lt.length-Kt.length].length-Kt[0].length:this.yylloc.first_column-mt},this.options.ranges&&(this.yylloc.range=[Cn[0],Cn[0]+this.yyleng-mt]),this.yyleng=this.yytext.length,this},"unput"),more:o(function(){return this._more=!0,this},"more"),reject:o(function(){if(this.options.backtrack_lexer)this._backtrack=!0;else return this.parseError("Lexical error on line "+(this.yylineno+1)+`. You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true). +`+this.showPosition(),{text:"",token:null,line:this.yylineno});return this},"reject"),less:o(function(et){this.unput(this.match.slice(et))},"less"),pastInput:o(function(){var et=this.matched.substr(0,this.matched.length-this.match.length);return(et.length>20?"...":"")+et.substr(-20).replace(/\n/g,"")},"pastInput"),upcomingInput:o(function(){var et=this.match;return et.length<20&&(et+=this._input.substr(0,20-et.length)),(et.substr(0,20)+(et.length>20?"...":"")).replace(/\n/g,"")},"upcomingInput"),showPosition:o(function(){var et=this.pastInput(),mt=new Array(et.length+1).join("-");return et+this.upcomingInput()+` +`+mt+"^"},"showPosition"),test_match:o(function(et,mt){var Kt,lt,Cn;if(this.options.backtrack_lexer&&(Cn={yylineno:this.yylineno,yylloc:{first_line:this.yylloc.first_line,last_line:this.last_line,first_column:this.yylloc.first_column,last_column:this.yylloc.last_column},yytext:this.yytext,match:this.match,matches:this.matches,matched:this.matched,yyleng:this.yyleng,offset:this.offset,_more:this._more,_input:this._input,yy:this.yy,conditionStack:this.conditionStack.slice(0),done:this.done},this.options.ranges&&(Cn.yylloc.range=this.yylloc.range.slice(0))),lt=et[0].match(/(?:\r\n?|\n).*/g),lt&&(this.yylineno+=lt.length),this.yylloc={first_line:this.yylloc.last_line,last_line:this.yylineno+1,first_column:this.yylloc.last_column,last_column:lt?lt[lt.length-1].length-lt[lt.length-1].match(/\r?\n?/)[0].length:this.yylloc.last_column+et[0].length},this.yytext+=et[0],this.match+=et[0],this.matches=et,this.yyleng=this.yytext.length,this.options.ranges&&(this.yylloc.range=[this.offset,this.offset+=this.yyleng]),this._more=!1,this._backtrack=!1,this._input=this._input.slice(et[0].length),this.matched+=et[0],Kt=this.performAction.call(this,this.yy,this,mt,this.conditionStack[this.conditionStack.length-1]),this.done&&this._input&&(this.done=!1),Kt)return Kt;if(this._backtrack){for(var ye in Cn)this[ye]=Cn[ye];return!1}return!1},"test_match"),next:o(function(){if(this.done)return this.EOF;this._input||(this.done=!0);var et,mt,Kt,lt;this._more||(this.yytext="",this.match="");for(var Cn=this._currentRules(),ye=0;yemt[0].length)){if(mt=Kt,lt=ye,this.options.backtrack_lexer){if(et=this.test_match(Kt,Cn[ye]),et!==!1)return et;if(this._backtrack){mt=!1;continue}else return!1}else if(!this.options.flex)break}return mt?(et=this.test_match(mt,Cn[lt]),et!==!1?et:!1):this._input===""?this.EOF:this.parseError("Lexical error on line "+(this.yylineno+1)+`. Unrecognized text. +`+this.showPosition(),{text:"",token:null,line:this.yylineno})},"next"),lex:o(function(){var mt=this.next();return mt||this.lex()},"lex"),begin:o(function(mt){this.conditionStack.push(mt)},"begin"),popState:o(function(){var mt=this.conditionStack.length-1;return mt>0?this.conditionStack.pop():this.conditionStack[0]},"popState"),_currentRules:o(function(){return this.conditionStack.length&&this.conditionStack[this.conditionStack.length-1]?this.conditions[this.conditionStack[this.conditionStack.length-1]].rules:this.conditions.INITIAL.rules},"_currentRules"),topState:o(function(mt){return mt=this.conditionStack.length-1-Math.abs(mt||0),mt>=0?this.conditionStack[mt]:"INITIAL"},"topState"),pushState:o(function(mt){this.begin(mt)},"pushState"),stateStackSize:o(function(){return this.conditionStack.length},"stateStackSize"),options:{},performAction:o(function(mt,Kt,lt,Cn){var ye=Cn;switch(lt){case 0:return this.begin("acc_title"),34;break;case 1:return this.popState(),"acc_title_value";break;case 2:return this.begin("acc_descr"),36;break;case 3:return this.popState(),"acc_descr_value";break;case 4:this.begin("acc_descr_multiline");break;case 5:this.popState();break;case 6:return"acc_descr_multiline_value";case 7:return this.pushState("shapeData"),Kt.yytext="",40;break;case 8:return this.pushState("shapeDataStr"),40;break;case 9:return this.popState(),40;break;case 10:let Vf=/\n\s*/g;return Kt.yytext=Kt.yytext.replace(Vf,"
    "),40;break;case 11:return 40;case 12:this.popState();break;case 13:this.begin("callbackname");break;case 14:this.popState();break;case 15:this.popState(),this.begin("callbackargs");break;case 16:return 95;case 17:this.popState();break;case 18:return 96;case 19:return"MD_STR";case 20:this.popState();break;case 21:this.begin("md_string");break;case 22:return"STR";case 23:this.popState();break;case 24:this.pushState("string");break;case 25:return 84;case 26:return 102;case 27:return 85;case 28:return 104;case 29:return 86;case 30:return 87;case 31:return 97;case 32:this.begin("click");break;case 33:this.popState();break;case 34:return 88;case 35:return mt.lex.firstGraph()&&this.begin("dir"),12;break;case 36:return mt.lex.firstGraph()&&this.begin("dir"),12;break;case 37:return mt.lex.firstGraph()&&this.begin("dir"),12;break;case 38:return 27;case 39:return 32;case 40:return 98;case 41:return 98;case 42:return 98;case 43:return 98;case 44:return this.popState(),13;break;case 45:return this.popState(),14;break;case 46:return this.popState(),14;break;case 47:return this.popState(),14;break;case 48:return this.popState(),14;break;case 49:return this.popState(),14;break;case 50:return this.popState(),14;break;case 51:return this.popState(),14;break;case 52:return this.popState(),14;break;case 53:return this.popState(),14;break;case 54:return this.popState(),14;break;case 55:return 121;case 56:return 122;case 57:return 123;case 58:return 124;case 59:return 78;case 60:return 105;case 61:return 111;case 62:return 46;case 63:return 60;case 64:return 44;case 65:return 8;case 66:return 106;case 67:return 115;case 68:return this.popState(),77;break;case 69:return this.pushState("edgeText"),75;break;case 70:return 119;case 71:return this.popState(),77;break;case 72:return this.pushState("thickEdgeText"),75;break;case 73:return 119;case 74:return this.popState(),77;break;case 75:return this.pushState("dottedEdgeText"),75;break;case 76:return 119;case 77:return 77;case 78:return this.popState(),53;break;case 79:return"TEXT";case 80:return this.pushState("ellipseText"),52;break;case 81:return this.popState(),55;break;case 82:return this.pushState("text"),54;break;case 83:return this.popState(),57;break;case 84:return this.pushState("text"),56;break;case 85:return 58;case 86:return this.pushState("text"),67;break;case 87:return this.popState(),64;break;case 88:return this.pushState("text"),63;break;case 89:return this.popState(),49;break;case 90:return this.pushState("text"),48;break;case 91:return this.popState(),69;break;case 92:return this.popState(),71;break;case 93:return 117;case 94:return this.pushState("trapText"),68;break;case 95:return this.pushState("trapText"),70;break;case 96:return 118;case 97:return 67;case 98:return 90;case 99:return"SEP";case 100:return 89;case 101:return 115;case 102:return 111;case 103:return 44;case 104:return 109;case 105:return 114;case 106:return 116;case 107:return this.popState(),62;break;case 108:return this.pushState("text"),62;break;case 109:return this.popState(),51;break;case 110:return this.pushState("text"),50;break;case 111:return this.popState(),31;break;case 112:return this.pushState("text"),29;break;case 113:return this.popState(),66;break;case 114:return this.pushState("text"),65;break;case 115:return"TEXT";case 116:return"QUOTE";case 117:return 9;case 118:return 10;case 119:return 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.icon-shape .label { + text-anchor: middle; + } + // .flowchart-label .text-outer-tspan { + // text-anchor: middle; + // } + // .flowchart-label .text-inner-tspan { + // text-anchor: start; + // } + + .node .katex path { + fill: #000; + stroke: #000; + stroke-width: 1px; + } + + .rough-node .label,.node .label, .image-shape .label, .icon-shape .label { + text-align: center; + } + .node.clickable { + cursor: pointer; + } + + + .root .anchor path { + fill: ${t.lineColor} !important; + stroke-width: 0; + stroke: ${t.lineColor}; + } + + .arrowheadPath { + fill: ${t.arrowheadColor}; + } + + .edgePath .path { + stroke: ${t.lineColor}; + stroke-width: 2.0px; + } + + .flowchart-link { + stroke: ${t.lineColor}; + fill: none; + } + + .edgeLabel { + background-color: ${t.edgeLabelBackground}; + p { + background-color: ${t.edgeLabelBackground}; + } + rect { + opacity: 0.5; + background-color: ${t.edgeLabelBackground}; + fill: ${t.edgeLabelBackground}; + } + text-align: center; + } + + /* For html labels only */ + .labelBkg { + background-color: ${gOe(t.edgeLabelBackground,.5)}; + // background-color: + } + + .cluster rect { + fill: ${t.clusterBkg}; + stroke: ${t.clusterBorder}; + stroke-width: 1px; + } + + .cluster text { + fill: ${t.titleColor}; + } + + .cluster span { + color: ${t.titleColor}; + } + /* .cluster div { + color: ${t.titleColor}; + } */ + + div.mermaidTooltip { + position: absolute; + text-align: center; + max-width: 200px; + padding: 2px; + font-family: ${t.fontFamily}; + font-size: 12px; + background: ${t.tertiaryColor}; + border: 1px solid ${t.border2}; + border-radius: 2px; + pointer-events: none; + z-index: 100; + } + + .flowchartTitleText { + text-anchor: middle; + font-size: 18px; + fill: ${t.textColor}; + } + + rect.text { + fill: none; + stroke-width: 0; + } + + .icon-shape, .image-shape { + background-color: ${t.edgeLabelBackground}; + p { + background-color: ${t.edgeLabelBackground}; + padding: 2px; + } + rect { + opacity: 0.5; + background-color: ${t.edgeLabelBackground}; + fill: ${t.edgeLabelBackground}; + } + text-align: center; + } +`,"getStyles"),qie=yOe});var ik={};hr(ik,{diagram:()=>vOe});var vOe,ak=N(()=>{"use strict";zt();qZ();Gie();Wie();Yie();vOe={parser:Hie,get db(){return new Uw},renderer:zie,styles:qie,init:o(t=>{t.flowchart||(t.flowchart={}),t.layout&&Yy({layout:t.layout}),t.flowchart.arrowMarkerAbsolute=t.arrowMarkerAbsolute,Yy({flowchart:{arrowMarkerAbsolute:t.arrowMarkerAbsolute}})},"init")}});var wR,Zie,Jie=N(()=>{"use strict";wR=function(){var t=o(function(J,se,ue,Z){for(ue=ue||{},Z=J.length;Z--;ue[J[Z]]=se);return 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e=e.concat(_Pe(r)),e=e.concat(RPe(r)),e=e.concat(NPe(r)),e=e.concat(MPe(r)),e=e.concat(DPe(r)),e}function SPe(t){let e=Yr(t,i=>!Bt(i,lp)),r=Je(e,i=>({message:"Token Type: ->"+i.name+"<- missing static 'PATTERN' property",type:Yn.MISSING_PATTERN,tokenTypes:[i]})),n=Zh(t,e);return{errors:r,valid:n}}function CPe(t){let e=Yr(t,i=>{let a=i[lp];return!zo(a)&&!Si(a)&&!Bt(a,"exec")&&!yi(a)}),r=Je(e,i=>({message:"Token Type: ->"+i.name+"<- static 'PATTERN' can only be a RegExp, a Function matching the {CustomPatternMatcherFunc} type or an Object matching the {ICustomPattern} interface.",type:Yn.INVALID_PATTERN,tokenTypes:[i]})),n=Zh(t,e);return{errors:r,valid:n}}function _Pe(t){class e extends Mc{static{o(this,"EndAnchorFinder")}constructor(){super(...arguments),this.found=!1}visitEndAnchor(a){this.found=!0}}let r=Yr(t,i=>{let a=i.PATTERN;try{let s=Bg(a),l=new e;return l.visit(s),l.found}catch{return APe.test(a.source)}});return Je(r,i=>({message:`Unexpected RegExp Anchor Error: + Token Type: ->`+i.name+`<- static 'PATTERN' cannot contain end of input anchor '$' + See chevrotain.io/docs/guide/resolving_lexer_errors.html#ANCHORS for details.`,type:Yn.EOI_ANCHOR_FOUND,tokenTypes:[i]}))}function DPe(t){let e=Yr(t,n=>n.PATTERN.test(""));return Je(e,n=>({message:"Token Type: ->"+n.name+"<- static 'PATTERN' must not match an empty string",type:Yn.EMPTY_MATCH_PATTERN,tokenTypes:[n]}))}function RPe(t){class e extends Mc{static{o(this,"StartAnchorFinder")}constructor(){super(...arguments),this.found=!1}visitStartAnchor(a){this.found=!0}}let r=Yr(t,i=>{let a=i.PATTERN;try{let s=Bg(a),l=new e;return l.visit(s),l.found}catch{return LPe.test(a.source)}});return Je(r,i=>({message:`Unexpected RegExp Anchor Error: + Token Type: ->`+i.name+`<- static 'PATTERN' cannot contain start of input anchor '^' + See https://chevrotain.io/docs/guide/resolving_lexer_errors.html#ANCHORS for details.`,type:Yn.SOI_ANCHOR_FOUND,tokenTypes:[i]}))}function NPe(t){let e=Yr(t,n=>{let i=n[lp];return i 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->${i.name}<- static 'PUSH_MODE' value cannot refer to a Lexer Mode ->${i.PUSH_MODE}<-which does not exist`,type:Yn.PUSH_MODE_DOES_NOT_EXIST,tokenTypes:[i]}))}function PPe(t){let e=[],r=Xr(t,(n,i,a)=>{let s=i.PATTERN;return s===Xn.NA||(yi(s)?n.push({str:s,idx:a,tokenType:i}):zo(s)&&FPe(s)&&n.push({str:s.source,idx:a,tokenType:i})),n},[]);return Ae(t,(n,i)=>{Ae(r,({str:a,idx:s,tokenType:l})=>{if(i${l.name}<- can never be matched. +Because it appears AFTER the Token Type ->${n.name}<-in the lexer's definition. +See https://chevrotain.io/docs/guide/resolving_lexer_errors.html#UNREACHABLE`;e.push({message:u,type:Yn.UNREACHABLE_PATTERN,tokenTypes:[n,l]})}})}),e}function BPe(t,e){if(zo(e)){let r=e.exec(t);return r!==null&&r.index===0}else{if(Si(e))return e(t,0,[],{});if(Bt(e,"exec"))return e.exec(t,0,[],{});if(typeof e=="string")return e===t;throw Error("non exhaustive match")}}function FPe(t){return ns([".","\\","[","]","|","^","$","(",")","?","*","+","{"],r=>t.source.indexOf(r)!==-1)===void 0}function Gae(t){let e=t.ignoreCase?"i":"";return new RegExp(`^(?:${t.source})`,e)}function Vae(t){let e=t.ignoreCase?"iy":"y";return new RegExp(`${t.source}`,e)}function Wae(t,e,r){let n=[];return Bt(t,$g)||n.push({message:"A MultiMode Lexer cannot be initialized without a <"+$g+`> property in its definition +`,type:Yn.MULTI_MODE_LEXER_WITHOUT_DEFAULT_MODE}),Bt(t,Mk)||n.push({message:"A MultiMode Lexer cannot be initialized without a <"+Mk+`> property in its definition +`,type:Yn.MULTI_MODE_LEXER_WITHOUT_MODES_PROPERTY}),Bt(t,Mk)&&Bt(t,$g)&&!Bt(t.modes,t.defaultMode)&&n.push({message:`A MultiMode Lexer cannot be initialized with a ${$g}: <${t.defaultMode}>which does not exist +`,type:Yn.MULTI_MODE_LEXER_DEFAULT_MODE_VALUE_DOES_NOT_EXIST}),Bt(t,Mk)&&Ae(t.modes,(i,a)=>{Ae(i,(s,l)=>{if(pr(s))n.push({message:`A Lexer cannot be initialized using an undefined Token Type. Mode:<${a}> at index: <${l}> +`,type:Yn.LEXER_DEFINITION_CANNOT_CONTAIN_UNDEFINED});else if(Bt(s,"LONGER_ALT")){let u=Pt(s.LONGER_ALT)?s.LONGER_ALT:[s.LONGER_ALT];Ae(u,h=>{!pr(h)&&!qn(i,h)&&n.push({message:`A MultiMode Lexer cannot be initialized with a longer_alt <${h.name}> on token <${s.name}> outside of mode <${a}> +`,type:Yn.MULTI_MODE_LEXER_LONGER_ALT_NOT_IN_CURRENT_MODE})})}})}),n}function qae(t,e,r){let n=[],i=!1,a=Tc(qr(br(t.modes))),s=Jh(a,u=>u[lp]===Xn.NA),l=Qae(r);return e&&Ae(s,u=>{let h=Kae(u,l);if(h!==!1){let d={message:zPe(u,h),type:h.issue,tokenType:u};n.push(d)}else Bt(u,"LINE_BREAKS")?u.LINE_BREAKS===!0&&(i=!0):Nk(l,u.PATTERN)&&(i=!0)}),e&&!i&&n.push({message:`Warning: No LINE_BREAKS Found. + This Lexer has been defined to track line and column information, + But none of the Token Types can be identified as matching a line terminator. + See https://chevrotain.io/docs/guide/resolving_lexer_errors.html#LINE_BREAKS + for details.`,type:Yn.NO_LINE_BREAKS_FLAGS}),n}function Yae(t){let e={},r=zr(t);return Ae(r,n=>{let i=t[n];if(Pt(i))e[n]=[];else throw Error("non exhaustive match")}),e}function Xae(t){let e=t.PATTERN;if(zo(e))return!1;if(Si(e))return!0;if(Bt(e,"exec"))return!0;if(yi(e))return!1;throw Error("non exhaustive match")}function $Pe(t){return yi(t)&&t.length===1?t.charCodeAt(0):!1}function Kae(t,e){if(Bt(t,"LINE_BREAKS"))return!1;if(zo(t.PATTERN)){try{Nk(e,t.PATTERN)}catch(r){return{issue:Yn.IDENTIFY_TERMINATOR,errMsg:r.message}}return!1}else{if(yi(t.PATTERN))return!1;if(Xae(t))return{issue:Yn.CUSTOM_LINE_BREAK};throw Error("non exhaustive match")}}function zPe(t,e){if(e.issue===Yn.IDENTIFY_TERMINATOR)return`Warning: unable to identify line terminator usage in pattern. + The problem is in the <${t.name}> Token Type + Root cause: ${e.errMsg}. + For details See: https://chevrotain.io/docs/guide/resolving_lexer_errors.html#IDENTIFY_TERMINATOR`;if(e.issue===Yn.CUSTOM_LINE_BREAK)return`Warning: A Custom Token Pattern should specify the option. + The problem is in the <${t.name}> Token Type + For details See: https://chevrotain.io/docs/guide/resolving_lexer_errors.html#CUSTOM_LINE_BREAK`;throw Error("non exhaustive match")}function Qae(t){return Je(t,r=>yi(r)?r.charCodeAt(0):r)}function CN(t,e,r){t[e]===void 0?t[e]=[r]:t[e].push(r)}function Ic(t){return t255?255+~~(t/255):t}}var lp,$g,Mk,AN,APe,LPe,jae,Fg,Ik,SN=N(()=>{"use strict";j2();ix();qt();Og();zae();Lk();lp="PATTERN",$g="defaultMode",Mk="modes",AN=typeof new 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UPe(t){Ae(t,e=>{_N(e)||(ese[Zae]=e,e.tokenTypeIdx=Zae++),Jae(e)&&!Pt(e.CATEGORIES)&&(e.CATEGORIES=[e.CATEGORIES]),Jae(e)||(e.CATEGORIES=[]),qPe(e)||(e.categoryMatches=[]),YPe(e)||(e.categoryMatchesMap={})})}function HPe(t){Ae(t,e=>{e.categoryMatches=[],Ae(e.categoryMatchesMap,(r,n)=>{e.categoryMatches.push(ese[n].tokenTypeIdx)})})}function WPe(t){Ae(t,e=>{tse([],e)})}function tse(t,e){Ae(t,r=>{e.categoryMatchesMap[r.tokenTypeIdx]=!0}),Ae(e.CATEGORIES,r=>{let n=t.concat(e);qn(n,r)||tse(n,r)})}function _N(t){return Bt(t,"tokenTypeIdx")}function Jae(t){return Bt(t,"CATEGORIES")}function qPe(t){return Bt(t,"categoryMatches")}function YPe(t){return Bt(t,"categoryMatchesMap")}function rse(t){return Bt(t,"tokenTypeIdx")}var Zae,ese,cp=N(()=>{"use strict";qt();o(Pu,"tokenStructuredMatcher");o(zg,"tokenStructuredMatcherNoCategories");Zae=1,ese={};o(Bu,"augmentTokenTypes");o(VPe,"expandCategories");o(UPe,"assignTokenDefaultProps");o(HPe,"assignCategoriesTokensProp");o(WPe,"assignCategoriesMapProp");o(tse,"singleAssignCategoriesToksMap");o(_N,"hasShortKeyProperty");o(Jae,"hasCategoriesProperty");o(qPe,"hasExtendingTokensTypesProperty");o(YPe,"hasExtendingTokensTypesMapProperty");o(rse,"isTokenType")});var Gg,DN=N(()=>{"use strict";Gg={buildUnableToPopLexerModeMessage(t){return`Unable to pop Lexer Mode after encountering Token ->${t.image}<- The Mode Stack is empty`},buildUnexpectedCharactersMessage(t,e,r,n,i){return`unexpected character: ->${t.charAt(e)}<- at offset: ${e}, skipped ${r} characters.`}}});var Yn,ax,Xn,ix=N(()=>{"use strict";SN();qt();Og();cp();DN();Lk();(function(t){t[t.MISSING_PATTERN=0]="MISSING_PATTERN",t[t.INVALID_PATTERN=1]="INVALID_PATTERN",t[t.EOI_ANCHOR_FOUND=2]="EOI_ANCHOR_FOUND",t[t.UNSUPPORTED_FLAGS_FOUND=3]="UNSUPPORTED_FLAGS_FOUND",t[t.DUPLICATE_PATTERNS_FOUND=4]="DUPLICATE_PATTERNS_FOUND",t[t.INVALID_GROUP_TYPE_FOUND=5]="INVALID_GROUP_TYPE_FOUND",t[t.PUSH_MODE_DOES_NOT_EXIST=6]="PUSH_MODE_DOES_NOT_EXIST",t[t.MULTI_MODE_LEXER_WITHOUT_DEFAULT_MODE=7]="MULTI_MODE_LEXER_WITHOUT_DEFAULT_MODE",t[t.MULTI_MODE_LEXER_WITHOUT_MODES_PROPERTY=8]="MULTI_MODE_LEXER_WITHOUT_MODES_PROPERTY",t[t.MULTI_MODE_LEXER_DEFAULT_MODE_VALUE_DOES_NOT_EXIST=9]="MULTI_MODE_LEXER_DEFAULT_MODE_VALUE_DOES_NOT_EXIST",t[t.LEXER_DEFINITION_CANNOT_CONTAIN_UNDEFINED=10]="LEXER_DEFINITION_CANNOT_CONTAIN_UNDEFINED",t[t.SOI_ANCHOR_FOUND=11]="SOI_ANCHOR_FOUND",t[t.EMPTY_MATCH_PATTERN=12]="EMPTY_MATCH_PATTERN",t[t.NO_LINE_BREAKS_FLAGS=13]="NO_LINE_BREAKS_FLAGS",t[t.UNREACHABLE_PATTERN=14]="UNREACHABLE_PATTERN",t[t.IDENTIFY_TERMINATOR=15]="IDENTIFY_TERMINATOR",t[t.CUSTOM_LINE_BREAK=16]="CUSTOM_LINE_BREAK",t[t.MULTI_MODE_LEXER_LONGER_ALT_NOT_IN_CURRENT_MODE=17]="MULTI_MODE_LEXER_LONGER_ALT_NOT_IN_CURRENT_MODE"})(Yn||(Yn={}));ax={deferDefinitionErrorsHandling:!1,positionTracking:"full",lineTerminatorsPattern:/\n|\r\n?/g,lineTerminatorCharacters:[` +`,"\r"],ensureOptimizations:!1,safeMode:!1,errorMessageProvider:Gg,traceInitPerf:!1,skipValidations:!1,recoveryEnabled:!0};Object.freeze(ax);Xn=class{static{o(this,"Lexer")}constructor(e,r=ax){if(this.lexerDefinition=e,this.lexerDefinitionErrors=[],this.lexerDefinitionWarning=[],this.patternIdxToConfig={},this.charCodeToPatternIdxToConfig={},this.modes=[],this.emptyGroups={},this.trackStartLines=!0,this.trackEndLines=!0,this.hasCustom=!1,this.canModeBeOptimized={},this.TRACE_INIT=(i,a)=>{if(this.traceInitPerf===!0){this.traceInitIndent++;let s=new Array(this.traceInitIndent+1).join(" ");this.traceInitIndent <${i}>`);let{time:l,value:u}=tx(a),h=l>10?console.warn:console.log;return this.traceInitIndent time: ${l}ms`),this.traceInitIndent--,u}else return a()},typeof r=="boolean")throw Error(`The second argument to the Lexer constructor is now an ILexerConfig Object. +a boolean 2nd argument is no longer supported`);this.config=ma({},ax,r);let n=this.config.traceInitPerf;n===!0?(this.traceInitMaxIdent=1/0,this.traceInitPerf=!0):typeof n=="number"&&(this.traceInitMaxIdent=n,this.traceInitPerf=!0),this.traceInitIndent=-1,this.TRACE_INIT("Lexer Constructor",()=>{let i,a=!0;this.TRACE_INIT("Lexer Config handling",()=>{if(this.config.lineTerminatorsPattern===ax.lineTerminatorsPattern)this.config.lineTerminatorsPattern=jae;else if(this.config.lineTerminatorCharacters===ax.lineTerminatorCharacters)throw Error(`Error: Missing property on the Lexer config. + For details See: https://chevrotain.io/docs/guide/resolving_lexer_errors.html#MISSING_LINE_TERM_CHARS`);if(r.safeMode&&r.ensureOptimizations)throw Error('"safeMode" and "ensureOptimizations" flags are mutually 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h;this.TRACE_INIT("analyzeTokenTypes",()=>{h=Uae(l,{lineTerminatorCharacters:this.config.lineTerminatorCharacters,positionTracking:r.positionTracking,ensureOptimizations:r.ensureOptimizations,safeMode:r.safeMode,tracer:this.TRACE_INIT})}),this.patternIdxToConfig[u]=h.patternIdxToConfig,this.charCodeToPatternIdxToConfig[u]=h.charCodeToPatternIdxToConfig,this.emptyGroups=ma({},this.emptyGroups,h.emptyGroups),this.hasCustom=h.hasCustom||this.hasCustom,this.canModeBeOptimized[u]=h.canBeOptimized}})}),this.defaultMode=i.defaultMode,!ur(this.lexerDefinitionErrors)&&!this.config.deferDefinitionErrorsHandling){let u=Je(this.lexerDefinitionErrors,h=>h.message).join(`----------------------- +`);throw new Error(`Errors detected in definition of Lexer: +`+u)}Ae(this.lexerDefinitionWarning,l=>{ex(l.message)}),this.TRACE_INIT("Choosing sub-methods implementations",()=>{if(AN?(this.chopInput=ta,this.match=this.matchWithTest):(this.updateLastIndex=ni,this.match=this.matchWithExec),a&&(this.handleModes=ni),this.trackStartLines===!1&&(this.computeNewColumn=ta),this.trackEndLines===!1&&(this.updateTokenEndLineColumnLocation=ni),/full/i.test(this.config.positionTracking))this.createTokenInstance=this.createFullToken;else if(/onlyStart/i.test(this.config.positionTracking))this.createTokenInstance=this.createStartOnlyToken;else if(/onlyOffset/i.test(this.config.positionTracking))this.createTokenInstance=this.createOffsetOnlyToken;else throw Error(`Invalid config option: "${this.config.positionTracking}"`);this.hasCustom?(this.addToken=this.addTokenUsingPush,this.handlePayload=this.handlePayloadWithCustom):(this.addToken=this.addTokenUsingMemberAccess,this.handlePayload=this.handlePayloadNoCustom)}),this.TRACE_INIT("Failed Optimization Warnings",()=>{let l=Xr(this.canModeBeOptimized,(u,h,f)=>(h===!1&&u.push(f),u),[]);if(r.ensureOptimizations&&!ur(l))throw Error(`Lexer Modes: < ${l.join(", ")} > cannot be optimized. + Disable the "ensureOptimizations" lexer config flag to silently ignore this and run the lexer in an un-optimized mode. + Or inspect the console log for details on how to resolve these issues.`)}),this.TRACE_INIT("clearRegExpParserCache",()=>{Pae()}),this.TRACE_INIT("toFastProperties",()=>{rx(this)})})}tokenize(e,r=this.defaultMode){if(!ur(this.lexerDefinitionErrors)){let i=Je(this.lexerDefinitionErrors,a=>a.message).join(`----------------------- +`);throw new Error(`Unable to Tokenize because Errors detected in definition of Lexer: +`+i)}return this.tokenizeInternal(e,r)}tokenizeInternal(e,r){let n,i,a,s,l,u,h,f,d,p,m,g,y,v,x,b,w=e,C=w.length,T=0,E=0,A=this.hasCustom?0:Math.floor(e.length/10),S=new Array(A),_=[],I=this.trackStartLines?1:void 0,D=this.trackStartLines?1:void 0,k=Yae(this.emptyGroups),L=this.trackStartLines,R=this.config.lineTerminatorsPattern,O=0,M=[],B=[],F=[],P=[];Object.freeze(P);let z;function $(){return M}o($,"getPossiblePatternsSlow");function H(le){let he=Ic(le),K=B[he];return K===void 0?P:K}o(H,"getPossiblePatternsOptimized");let Q=o(le=>{if(F.length===1&&le.tokenType.PUSH_MODE===void 0){let he=this.config.errorMessageProvider.buildUnableToPopLexerModeMessage(le);_.push({offset:le.startOffset,line:le.startLine,column:le.startColumn,length:le.image.length,message:he})}else{F.pop();let he=ga(F);M=this.patternIdxToConfig[he],B=this.charCodeToPatternIdxToConfig[he],O=M.length;let K=this.canModeBeOptimized[he]&&this.config.safeMode===!1;B&&K?z=H:z=$}},"pop_mode");function j(le){F.push(le),B=this.charCodeToPatternIdxToConfig[le],M=this.patternIdxToConfig[le],O=M.length,O=M.length;let he=this.canModeBeOptimized[le]&&this.config.safeMode===!1;B&&he?z=H:z=$}o(j,"push_mode"),j.call(this,r);let ie,ne=this.config.recoveryEnabled;for(;Tu.length){u=s,h=f,ie=se;break}}}break}}if(u!==null){if(d=u.length,p=ie.group,p!==void 0&&(m=ie.tokenTypeIdx,g=this.createTokenInstance(u,T,m,ie.tokenType,I,D,d),this.handlePayload(g,h),p===!1?E=this.addToken(S,E,g):k[p].push(g)),e=this.chopInput(e,d),T=T+d,D=this.computeNewColumn(D,d),L===!0&&ie.canLineTerminator===!0){let X=0,te,J;R.lastIndex=0;do te=R.test(u),te===!0&&(J=R.lastIndex-1,X++);while(te===!0);X!==0&&(I=I+X,D=d-J,this.updateTokenEndLineColumnLocation(g,p,J,X,I,D,d))}this.handleModes(ie,Q,j,g)}else{let X=T,te=I,J=D,se=ne===!1;for(;se===!1&&T{"use strict";qt();ix();cp();o(Fu,"tokenLabel");o(LN,"hasTokenLabel");XPe="parent",nse="categories",ise="label",ase="group",sse="push_mode",ose="pop_mode",lse="longer_alt",cse="line_breaks",use="start_chars_hint";o(of,"createToken");o(jPe,"createTokenInternal");lo=of({name:"EOF",pattern:Xn.NA});Bu([lo]);o($u,"createTokenInstance");o(sx,"tokenMatcher")});var zu,hse,Pl,Vg=N(()=>{"use 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<${Je(t,h=>`[${Je(h,f=>Fu(f)).join(",")}]`).join(" ,")}>`;return i+u+s}}};Object.freeze(zu);hse={buildRuleNotFoundError(t,e){return"Invalid grammar, reference to a rule which is not defined: ->"+e.nonTerminalName+`<- +inside top level rule: ->`+t.name+"<-"}},Pl={buildDuplicateFoundError(t,e){function r(f){return f instanceof kr?f.terminalType.name:f instanceof on?f.nonTerminalName:""}o(r,"getExtraProductionArgument");let n=t.name,i=ia(e),a=i.idx,s=Bs(i),l=r(i),u=a>0,h=`->${s}${u?a:""}<- ${l?`with argument: ->${l}<-`:""} + appears more than once (${e.length} times) in the top level rule: ->${n}<-. + For further details see: https://chevrotain.io/docs/FAQ.html#NUMERICAL_SUFFIXES + `;return h=h.replace(/[ \t]+/g," "),h=h.replace(/\s\s+/g,` +`),h},buildNamespaceConflictError(t){return`Namespace conflict found in grammar. +The grammar has both a Terminal(Token) and a Non-Terminal(Rule) named: <${t.name}>. +To resolve this make sure each Terminal and Non-Terminal names are unique +This is easy to accomplish by using the convention that Terminal names start with an uppercase letter +and Non-Terminal names start with a lower case letter.`},buildAlternationPrefixAmbiguityError(t){let e=Je(t.prefixPath,i=>Fu(i)).join(", "),r=t.alternation.idx===0?"":t.alternation.idx;return`Ambiguous alternatives: <${t.ambiguityIndices.join(" ,")}> due to common lookahead prefix +in inside <${t.topLevelRule.name}> Rule, +<${e}> may appears as a prefix path in all these alternatives. +See: https://chevrotain.io/docs/guide/resolving_grammar_errors.html#COMMON_PREFIX +For Further details.`},buildAlternationAmbiguityError(t){let e=Je(t.prefixPath,i=>Fu(i)).join(", "),r=t.alternation.idx===0?"":t.alternation.idx,n=`Ambiguous Alternatives Detected: <${t.ambiguityIndices.join(" ,")}> in inside <${t.topLevelRule.name}> Rule, +<${e}> may appears as a prefix path in all these alternatives. +`;return n=n+`See: https://chevrotain.io/docs/guide/resolving_grammar_errors.html#AMBIGUOUS_ALTERNATIVES +For Further details.`,n},buildEmptyRepetitionError(t){let e=Bs(t.repetition);return t.repetition.idx!==0&&(e+=t.repetition.idx),`The repetition <${e}> within Rule <${t.topLevelRule.name}> can never consume any tokens. +This could lead to an infinite loop.`},buildTokenNameError(t){return"deprecated"},buildEmptyAlternationError(t){return`Ambiguous empty alternative: <${t.emptyChoiceIdx+1}> in inside <${t.topLevelRule.name}> Rule. +Only the last alternative may be an empty alternative.`},buildTooManyAlternativesError(t){return`An Alternation cannot have more than 256 alternatives: + inside <${t.topLevelRule.name}> Rule. + has ${t.alternation.definition.length+1} alternatives.`},buildLeftRecursionError(t){let e=t.topLevelRule.name,r=Je(t.leftRecursionPath,a=>a.name),n=`${e} --> ${r.concat([e]).join(" --> ")}`;return`Left Recursion found in grammar. +rule: <${e}> can be invoked from itself (directly or indirectly) +without consuming any Tokens. The grammar path that causes this is: + ${n} + To fix this refactor your grammar to remove the left recursion. +see: https://en.wikipedia.org/wiki/LL_parser#Left_factoring.`},buildInvalidRuleNameError(t){return"deprecated"},buildDuplicateRuleNameError(t){let e;return t.topLevelRule instanceof as?e=t.topLevelRule.name:e=t.topLevelRule,`Duplicate definition, rule: ->${e}<- is already defined in the grammar: ->${t.grammarName}<-`}}});function fse(t,e){let r=new RN(t,e);return r.resolveRefs(),r.errors}var RN,dse=N(()=>{"use strict";Fs();qt();os();o(fse,"resolveGrammar");RN=class extends ss{static{o(this,"GastRefResolverVisitor")}constructor(e,r){super(),this.nameToTopRule=e,this.errMsgProvider=r,this.errors=[]}resolveRefs(){Ae(br(this.nameToTopRule),e=>{this.currTopLevel=e,e.accept(this)})}visitNonTerminal(e){let r=this.nameToTopRule[e.nonTerminalName];if(r)e.referencedRule=r;else{let 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this.ruleStack=an(this.path.ruleStack).reverse(),this.occurrenceStack=an(this.path.occurrenceStack).reverse(),this.ruleStack.pop(),this.occurrenceStack.pop(),this.updateExpectedNext(),this.walk(this.topProd),this.possibleTokTypes}walk(e,r=[]){this.found||super.walk(e,r)}walkProdRef(e,r,n){if(e.referencedRule.name===this.nextProductionName&&e.idx===this.nextProductionOccurrence){let i=r.concat(n);this.updateExpectedNext(),this.walk(e.referencedRule,i)}}updateExpectedNext(){ur(this.ruleStack)?(this.nextProductionName="",this.nextProductionOccurrence=0,this.isAtEndOfPath=!0):(this.nextProductionName=this.ruleStack.pop(),this.nextProductionOccurrence=this.occurrenceStack.pop())}},Ok=class extends NN{static{o(this,"NextAfterTokenWalker")}constructor(e,r){super(e,r),this.path=r,this.nextTerminalName="",this.nextTerminalOccurrence=0,this.nextTerminalName=this.path.lastTok.name,this.nextTerminalOccurrence=this.path.lastTokOccurrence}walkTerminal(e,r,n){if(this.isAtEndOfPath&&e.terminalType.name===this.nextTerminalName&&e.idx===this.nextTerminalOccurrence&&!this.found){let i=r.concat(n),a=new Dn({definition:i});this.possibleTokTypes=op(a),this.found=!0}}},Ug=class extends Ou{static{o(this,"AbstractNextTerminalAfterProductionWalker")}constructor(e,r){super(),this.topRule=e,this.occurrence=r,this.result={token:void 0,occurrence:void 0,isEndOfRule:void 0}}startWalking(){return this.walk(this.topRule),this.result}},Pk=class extends Ug{static{o(this,"NextTerminalAfterManyWalker")}walkMany(e,r,n){if(e.idx===this.occurrence){let i=ia(r.concat(n));this.result.isEndOfRule=i===void 0,i instanceof kr&&(this.result.token=i.terminalType,this.result.occurrence=i.idx)}else super.walkMany(e,r,n)}},ox=class extends Ug{static{o(this,"NextTerminalAfterManySepWalker")}walkManySep(e,r,n){if(e.idx===this.occurrence){let i=ia(r.concat(n));this.result.isEndOfRule=i===void 0,i instanceof kr&&(this.result.token=i.terminalType,this.result.occurrence=i.idx)}else super.walkManySep(e,r,n)}},Bk=class extends Ug{static{o(this,"NextTerminalAfterAtLeastOneWalker")}walkAtLeastOne(e,r,n){if(e.idx===this.occurrence){let i=ia(r.concat(n));this.result.isEndOfRule=i===void 0,i instanceof kr&&(this.result.token=i.terminalType,this.result.occurrence=i.idx)}else super.walkAtLeastOne(e,r,n)}},lx=class extends Ug{static{o(this,"NextTerminalAfterAtLeastOneSepWalker")}walkAtLeastOneSep(e,r,n){if(e.idx===this.occurrence){let i=ia(r.concat(n));this.result.isEndOfRule=i===void 0,i instanceof kr&&(this.result.token=i.terminalType,this.result.occurrence=i.idx)}else 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l=Je(s,u=>u.GATE);for(let u=0;uqr(u)),l=Xr(s,(u,h,f)=>(Ae(h,d=>{Bt(u,d.tokenTypeIdx)||(u[d.tokenTypeIdx]=f),Ae(d.categoryMatches,p=>{Bt(u,p)||(u[p]=f)})}),u),{});return function(){let u=this.LA(1);return l[u.tokenTypeIdx]}}else return function(){for(let s=0;sa.length===1),i=t.length;if(n&&!r){let a=qr(t);if(a.length===1&&ur(a[0].categoryMatches)){let l=a[0].tokenTypeIdx;return function(){return this.LA(1).tokenTypeIdx===l}}else{let s=Xr(a,(l,u,h)=>(l[u.tokenTypeIdx]=!0,Ae(u.categoryMatches,f=>{l[f]=!0}),l),[]);return function(){let l=this.LA(1);return s[l.tokenTypeIdx]===!0}}}else return function(){e:for(let a=0;aFk([s],1)),n=pse(r.length),i=Je(r,s=>{let l={};return Ae(s,u=>{let h=MN(u.partialPath);Ae(h,f=>{l[f]=!0})}),l}),a=r;for(let s=1;s<=e;s++){let l=a;a=pse(l.length);for(let u=0;u{let x=MN(v.partialPath);Ae(x,b=>{i[u][b]=!0})})}}}}return n}function Hg(t,e,r,n){let i=new zk(t,jn.ALTERNATION,n);return e.accept(i),xse(i.result,r)}function Wg(t,e,r,n){let i=new zk(t,r);e.accept(i);let a=i.result,l=new IN(e,t,r).startWalking(),u=new Dn({definition:a}),h=new Dn({definition:l});return xse([u,h],n)}function Vk(t,e){e:for(let r=0;r{let i=e[n];return r===i||i.categoryMatchesMap[r.tokenTypeIdx]})}function wse(t){return Ma(t,e=>Ma(e,r=>Ma(r,n=>ur(n.categoryMatches))))}var jn,IN,zk,qg=N(()=>{"use strict";qt();cx();Ak();cp();os();(function(t){t[t.OPTION=0]="OPTION",t[t.REPETITION=1]="REPETITION",t[t.REPETITION_MANDATORY=2]="REPETITION_MANDATORY",t[t.REPETITION_MANDATORY_WITH_SEPARATOR=3]="REPETITION_MANDATORY_WITH_SEPARATOR",t[t.REPETITION_WITH_SEPARATOR=4]="REPETITION_WITH_SEPARATOR",t[t.ALTERNATION=5]="ALTERNATION"})(jn||(jn={}));o(ux,"getProdType");o(Gk,"getLookaheadPaths");o(mse,"buildLookaheadFuncForOr");o(gse,"buildLookaheadFuncForOptionalProd");o(yse,"buildAlternativesLookAheadFunc");o(vse,"buildSingleAlternativeLookaheadFunction");IN=class extends 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i=ya(t,u=>ZPe(u,r)),a=iBe(t,e,r),s=ya(t,u=>tBe(u,r)),l=ya(t,u=>eBe(u,t,n,r));return i.concat(a,s,l)}function ZPe(t,e){let r=new ON;t.accept(r);let n=r.allProductions,i=IL(n,JPe),a=Os(i,l=>l.length>1);return Je(br(a),l=>{let u=ia(l),h=e.buildDuplicateFoundError(t,l),f=Bs(u),d={message:h,type:zi.DUPLICATE_PRODUCTIONS,ruleName:t.name,dslName:f,occurrence:u.idx},p=Ese(u);return p&&(d.parameter=p),d})}function JPe(t){return`${Bs(t)}_#_${t.idx}_#_${Ese(t)}`}function Ese(t){return t instanceof kr?t.terminalType.name:t instanceof on?t.nonTerminalName:""}function eBe(t,e,r,n){let i=[];if(Xr(e,(s,l)=>l.name===t.name?s+1:s,0)>1){let s=n.buildDuplicateRuleNameError({topLevelRule:t,grammarName:r});i.push({message:s,type:zi.DUPLICATE_RULE_NAME,ruleName:t.name})}return i}function Sse(t,e,r){let n=[],i;return qn(e,t)||(i=`Invalid rule override, rule: ->${t}<- cannot be overridden in the grammar: ->${r}<-as it is not defined in any of the super grammars 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ur(h)?[{message:e.buildEmptyAlternationError({topLevelRule:t,alternation:a,emptyChoiceIdx:u}),type:zi.NONE_LAST_EMPTY_ALT,ruleName:t.name,occurrence:a.idx,alternative:u+1}]:[]})})}function Ase(t,e,r){let n=new hx;t.accept(n);let i=n.alternations;return i=Jh(i,s=>s.ignoreAmbiguities===!0),ya(i,s=>{let l=s.idx,u=s.maxLookahead||e,h=Hg(l,t,u,s),f=rBe(h,s,t,r),d=nBe(h,s,t,r);return f.concat(d)})}function tBe(t,e){let r=new hx;t.accept(r);let n=r.alternations;return ya(n,a=>a.definition.length>255?[{message:e.buildTooManyAlternativesError({topLevelRule:t,alternation:a}),type:zi.TOO_MANY_ALTS,ruleName:t.name,occurrence:a.idx}]:[])}function _se(t,e,r){let n=[];return Ae(t,i=>{let a=new PN;i.accept(a);let s=a.allProductions;Ae(s,l=>{let u=ux(l),h=l.maxLookahead||e,f=l.idx,p=Wg(f,i,u,h)[0];if(ur(qr(p))){let m=r.buildEmptyRepetitionError({topLevelRule:i,repetition:l});n.push({message:m,type:zi.NO_NON_EMPTY_LOOKAHEAD,ruleName:i.name})}})}),n}function rBe(t,e,r,n){let i=[],a=Xr(t,(l,u,h)=>(e.definition[h].ignoreAmbiguities===!0||Ae(u,f=>{let d=[h];Ae(t,(p,m)=>{h!==m&&Vk(p,f)&&e.definition[m].ignoreAmbiguities!==!0&&d.push(m)}),d.length>1&&!Vk(i,f)&&(i.push(f),l.push({alts:d,path:f}))}),l),[]);return Je(a,l=>{let u=Je(l.alts,f=>f+1);return{message:n.buildAlternationAmbiguityError({topLevelRule:r,alternation:e,ambiguityIndices:u,prefixPath:l.path}),type:zi.AMBIGUOUS_ALTS,ruleName:r.name,occurrence:e.idx,alternatives:l.alts}})}function nBe(t,e,r,n){let i=Xr(t,(s,l,u)=>{let h=Je(l,f=>({idx:u,path:f}));return s.concat(h)},[]);return Tc(ya(i,s=>{if(e.definition[s.idx].ignoreAmbiguities===!0)return[];let u=s.idx,h=s.path,f=Yr(i,p=>e.definition[p.idx].ignoreAmbiguities!==!0&&p.idx{let m=[p.idx+1,u+1],g=e.idx===0?"":e.idx;return{message:n.buildAlternationPrefixAmbiguityError({topLevelRule:r,alternation:e,ambiguityIndices:m,prefixPath:p.path}),type:zi.AMBIGUOUS_PREFIX_ALTS,ruleName:r.name,occurrence:g,alternatives:m}})}))}function iBe(t,e,r){let n=[],i=Je(e,a=>a.name);return Ae(t,a=>{let s=a.name;if(qn(i,s)){let l=r.buildNamespaceConflictError(a);n.push({message:l,type:zi.CONFLICT_TOKENS_RULES_NAMESPACE,ruleName:s})}}),n}var ON,hx,PN,fx=N(()=>{"use strict";qt();Fs();os();qg();cx();cp();o(Tse,"validateLookahead");o(kse,"validateGrammar");o(ZPe,"validateDuplicateProductions");o(JPe,"identifyProductionForDuplicates");o(Ese,"getExtraProductionArgument");ON=class extends ss{static{o(this,"OccurrenceValidationCollector")}constructor(){super(...arguments),this.allProductions=[]}visitNonTerminal(e){this.allProductions.push(e)}visitOption(e){this.allProductions.push(e)}visitRepetitionWithSeparator(e){this.allProductions.push(e)}visitRepetitionMandatory(e){this.allProductions.push(e)}visitRepetitionMandatoryWithSeparator(e){this.allProductions.push(e)}visitRepetition(e){this.allProductions.push(e)}visitAlternation(e){this.allProductions.push(e)}visitTerminal(e){this.allProductions.push(e)}};o(eBe,"validateRuleDoesNotAlreadyExist");o(Sse,"validateRuleIsOverridden");o(BN,"validateNoLeftRecursion");o(Uk,"getFirstNoneTerminal");hx=class extends ss{static{o(this,"OrCollector")}constructor(){super(...arguments),this.alternations=[]}visitAlternation(e){this.alternations.push(e)}};o(Cse,"validateEmptyOrAlternative");o(Ase,"validateAmbiguousAlternationAlternatives");PN=class extends ss{static{o(this,"RepetitionCollector")}constructor(){super(...arguments),this.allProductions=[]}visitRepetitionWithSeparator(e){this.allProductions.push(e)}visitRepetitionMandatory(e){this.allProductions.push(e)}visitRepetitionMandatoryWithSeparator(e){this.allProductions.push(e)}visitRepetition(e){this.allProductions.push(e)}};o(tBe,"validateTooManyAlts");o(_se,"validateSomeNonEmptyLookaheadPath");o(rBe,"checkAlternativesAmbiguities");o(nBe,"checkPrefixAlternativesAmbiguities");o(iBe,"checkTerminalAndNoneTerminalsNameSpace")});function Dse(t){let e=Qh(t,{errMsgProvider:hse}),r={};return Ae(t.rules,n=>{r[n.name]=n}),fse(r,e.errMsgProvider)}function Lse(t){return t=Qh(t,{errMsgProvider:Pl}),kse(t.rules,t.tokenTypes,t.errMsgProvider,t.grammarName)}var Rse=N(()=>{"use strict";qt();dse();fx();Vg();o(Dse,"resolveGrammar");o(Lse,"validateGrammar")});function lf(t){return qn(Pse,t.name)}var Nse,Mse,Ise,Ose,Pse,Yg,hp,dx,px,mx,Xg=N(()=>{"use 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l=this.getKeyForAutomaticLookahead(n,i),u=this.firstAfterRepMap[l];if(u===void 0){let p=this.getCurrRuleFullName(),m=this.getGAstProductions()[p];u=new a(m,i).startWalking(),this.firstAfterRepMap[l]=u}let h=u.token,f=u.occurrence,d=u.isEndOfRule;this.RULE_STACK.length===1&&d&&h===void 0&&(h=lo,f=1),!(h===void 0||f===void 0)&&this.shouldInRepetitionRecoveryBeTried(h,f,s)&&this.tryInRepetitionRecovery(t,e,r,h)}var FN,zN,$N,Hk,GN=N(()=>{"use strict";up();qt();Xg();bN();Fs();FN={},zN="InRuleRecoveryException",$N=class extends Error{static{o(this,"InRuleRecoveryException")}constructor(e){super(e),this.name=zN}},Hk=class{static{o(this,"Recoverable")}initRecoverable(e){this.firstAfterRepMap={},this.resyncFollows={},this.recoveryEnabled=Bt(e,"recoveryEnabled")?e.recoveryEnabled:ls.recoveryEnabled,this.recoveryEnabled&&(this.attemptInRepetitionRecovery=aBe)}getTokenToInsert(e){let r=$u(e,"",NaN,NaN,NaN,NaN,NaN,NaN);return r.isInsertedInRecovery=!0,r}canTokenTypeBeInsertedInRecovery(e){return!0}canTokenTypeBeDeletedInRecovery(e){return!0}tryInRepetitionRecovery(e,r,n,i){let a=this.findReSyncTokenType(),s=this.exportLexerState(),l=[],u=!1,h=this.LA(1),f=this.LA(1),d=o(()=>{let p=this.LA(0),m=this.errorMessageProvider.buildMismatchTokenMessage({expected:i,actual:h,previous:p,ruleName:this.getCurrRuleFullName()}),g=new hp(m,h,this.LA(0));g.resyncedTokens=Nu(l),this.SAVE_ERROR(g)},"generateErrorMessage");for(;!u;)if(this.tokenMatcher(f,i)){d();return}else if(n.call(this)){d(),e.apply(this,r);return}else this.tokenMatcher(f,a)?u=!0:(f=this.SKIP_TOKEN(),this.addToResyncTokens(f,l));this.importLexerState(s)}shouldInRepetitionRecoveryBeTried(e,r,n){return!(n===!1||this.tokenMatcher(this.LA(1),e)||this.isBackTracking()||this.canPerformInRuleRecovery(e,this.getFollowsForInRuleRecovery(e,r)))}getFollowsForInRuleRecovery(e,r){let n=this.getCurrentGrammarPath(e,r);return this.getNextPossibleTokenTypes(n)}tryInRuleRecovery(e,r){if(this.canRecoverWithSingleTokenInsertion(e,r))return this.getTokenToInsert(e);if(this.canRecoverWithSingleTokenDeletion(e)){let n=this.SKIP_TOKEN();return this.consumeToken(),n}throw new $N("sad sad panda")}canPerformInRuleRecovery(e,r){return this.canRecoverWithSingleTokenInsertion(e,r)||this.canRecoverWithSingleTokenDeletion(e)}canRecoverWithSingleTokenInsertion(e,r){if(!this.canTokenTypeBeInsertedInRecovery(e)||ur(r))return!1;let n=this.LA(1);return ns(r,a=>this.tokenMatcher(n,a))!==void 0}canRecoverWithSingleTokenDeletion(e){return this.canTokenTypeBeDeletedInRecovery(e)?this.tokenMatcher(this.LA(2),e):!1}isInCurrentRuleReSyncSet(e){let r=this.getCurrFollowKey(),n=this.getFollowSetFromFollowKey(r);return qn(n,e)}findReSyncTokenType(){let e=this.flattenFollowSet(),r=this.LA(1),n=2;for(;;){let i=ns(e,a=>sx(r,a));if(i!==void 0)return i;r=this.LA(n),n++}}getCurrFollowKey(){if(this.RULE_STACK.length===1)return FN;let e=this.getLastExplicitRuleShortName(),r=this.getLastExplicitRuleOccurrenceIndex(),n=this.getPreviousExplicitRuleShortName();return{ruleName:this.shortRuleNameToFullName(e),idxInCallingRule:r,inRule:this.shortRuleNameToFullName(n)}}buildFullFollowKeyStack(){let e=this.RULE_STACK,r=this.RULE_OCCURRENCE_STACK;return Je(e,(n,i)=>i===0?FN:{ruleName:this.shortRuleNameToFullName(n),idxInCallingRule:r[i],inRule:this.shortRuleNameToFullName(e[i-1])})}flattenFollowSet(){let e=Je(this.buildFullFollowKeyStack(),r=>this.getFollowSetFromFollowKey(r));return qr(e)}getFollowSetFromFollowKey(e){if(e===FN)return[lo];let r=e.ruleName+e.idxInCallingRule+_k+e.inRule;return this.resyncFollows[r]}addToResyncTokens(e,r){return this.tokenMatcher(e,lo)||r.push(e),r}reSyncTo(e){let r=[],n=this.LA(1);for(;this.tokenMatcher(n,e)===!1;)n=this.SKIP_TOKEN(),this.addToResyncTokens(n,r);return Nu(r)}attemptInRepetitionRecovery(e,r,n,i,a,s,l){}getCurrentGrammarPath(e,r){let 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ss{static{o(this,"DslMethodsCollectorVisitor")}constructor(){super(...arguments),this.dslMethods={option:[],alternation:[],repetition:[],repetitionWithSeparator:[],repetitionMandatory:[],repetitionMandatoryWithSeparator:[]}}reset(){this.dslMethods={option:[],alternation:[],repetition:[],repetitionWithSeparator:[],repetitionMandatory:[],repetitionMandatoryWithSeparator:[]}}visitOption(e){this.dslMethods.option.push(e)}visitRepetitionWithSeparator(e){this.dslMethods.repetitionWithSeparator.push(e)}visitRepetitionMandatory(e){this.dslMethods.repetitionMandatory.push(e)}visitRepetitionMandatoryWithSeparator(e){this.dslMethods.repetitionMandatoryWithSeparator.push(e)}visitRepetition(e){this.dslMethods.repetition.push(e)}visitAlternation(e){this.dslMethods.alternation.push(e)}},Yk=new UN;o(sBe,"collectMethods")});function qN(t,e){isNaN(t.startOffset)===!0?(t.startOffset=e.startOffset,t.endOffset=e.endOffset):t.endOffset{"use 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if(/full/i.test(this.nodeLocationTracking))this.recoveryEnabled?(this.setNodeLocationFromToken=YN,this.setNodeLocationFromNode=YN,this.cstPostRule=ni,this.setInitialNodeLocation=this.setInitialNodeLocationFullRecovery):(this.setNodeLocationFromToken=ni,this.setNodeLocationFromNode=ni,this.cstPostRule=this.cstPostRuleFull,this.setInitialNodeLocation=this.setInitialNodeLocationFullRegular);else if(/onlyOffset/i.test(this.nodeLocationTracking))this.recoveryEnabled?(this.setNodeLocationFromToken=qN,this.setNodeLocationFromNode=qN,this.cstPostRule=ni,this.setInitialNodeLocation=this.setInitialNodeLocationOnlyOffsetRecovery):(this.setNodeLocationFromToken=ni,this.setNodeLocationFromNode=ni,this.cstPostRule=this.cstPostRuleOnlyOffset,this.setInitialNodeLocation=this.setInitialNodeLocationOnlyOffsetRegular);else if(/none/i.test(this.nodeLocationTracking))this.setNodeLocationFromToken=ni,this.setNodeLocationFromNode=ni,this.cstPostRule=ni,this.setInitialNodeLocation=ni;else throw Error(`Invalid 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r=this.LA(0),n=e.location;n.startOffset<=r.startOffset?n.endOffset=r.endOffset:n.startOffset=NaN}cstPostTerminal(e,r){let n=this.CST_STACK[this.CST_STACK.length-1];Fse(n,r,e),this.setNodeLocationFromToken(n.location,r)}cstPostNonTerminal(e,r){let n=this.CST_STACK[this.CST_STACK.length-1];$se(n,r,e),this.setNodeLocationFromNode(n.location,e.location)}getBaseCstVisitorConstructor(){if(pr(this.baseCstVisitorConstructor)){let e=Vse(this.className,zr(this.gastProductionsCache));return this.baseCstVisitorConstructor=e,e}return this.baseCstVisitorConstructor}getBaseCstVisitorConstructorWithDefaults(){if(pr(this.baseCstVisitorWithDefaultsConstructor)){let e=Use(this.className,zr(this.gastProductionsCache),this.getBaseCstVisitorConstructor());return this.baseCstVisitorWithDefaultsConstructor=e,e}return this.baseCstVisitorWithDefaultsConstructor}getLastExplicitRuleShortName(){let e=this.RULE_STACK;return e[e.length-1]}getPreviousExplicitRuleShortName(){let e=this.RULE_STACK;return e[e.length-2]}getLastExplicitRuleOccurrenceIndex(){let e=this.RULE_OCCURRENCE_STACK;return e[e.length-1]}}});var Jk,qse=N(()=>{"use strict";Fs();Jk=class{static{o(this,"LexerAdapter")}initLexerAdapter(){this.tokVector=[],this.tokVectorLength=0,this.currIdx=-1}set input(e){if(this.selfAnalysisDone!==!0)throw Error("Missing invocation at the end of the Parser's constructor.");this.reset(),this.tokVector=e,this.tokVectorLength=e.length}get input(){return this.tokVector}SKIP_TOKEN(){return this.currIdx<=this.tokVector.length-2?(this.consumeToken(),this.LA(1)):jg}LA(e){let r=this.currIdx+e;return r<0||this.tokVectorLength<=r?jg:this.tokVector[r]}consumeToken(){this.currIdx++}exportLexerState(){return this.currIdx}importLexerState(e){this.currIdx=e}resetLexerState(){this.currIdx=-1}moveToTerminatedState(){this.currIdx=this.tokVector.length-1}getLexerPosition(){return this.exportLexerState()}}});var eE,Yse=N(()=>{"use strict";qt();Xg();Fs();Vg();fx();os();eE=class{static{o(this,"RecognizerApi")}ACTION(e){return e.call(this)}consume(e,r,n){return this.consumeInternal(r,e,n)}subrule(e,r,n){return this.subruleInternal(r,e,n)}option(e,r){return this.optionInternal(r,e)}or(e,r){return this.orInternal(r,e)}many(e,r){return this.manyInternal(e,r)}atLeastOne(e,r){return this.atLeastOneInternal(e,r)}CONSUME(e,r){return this.consumeInternal(e,0,r)}CONSUME1(e,r){return this.consumeInternal(e,1,r)}CONSUME2(e,r){return this.consumeInternal(e,2,r)}CONSUME3(e,r){return this.consumeInternal(e,3,r)}CONSUME4(e,r){return this.consumeInternal(e,4,r)}CONSUME5(e,r){return this.consumeInternal(e,5,r)}CONSUME6(e,r){return this.consumeInternal(e,6,r)}CONSUME7(e,r){return this.consumeInternal(e,7,r)}CONSUME8(e,r){return this.consumeInternal(e,8,r)}CONSUME9(e,r){return this.consumeInternal(e,9,r)}SUBRULE(e,r){return this.subruleInternal(e,0,r)}SUBRULE1(e,r){return this.subruleInternal(e,1,r)}SUBRULE2(e,r){return this.subruleInternal(e,2,r)}SUBRULE3(e,r){return this.subruleInternal(e,3,r)}SUBRULE4(e,r){return this.subruleInternal(e,4,r)}SUBRULE5(e,r){return this.subruleInternal(e,5,r)}SUBRULE6(e,r){return this.subruleInternal(e,6,r)}SUBRULE7(e,r){return this.subruleInternal(e,7,r)}SUBRULE8(e,r){return this.subruleInternal(e,8,r)}SUBRULE9(e,r){return this.subruleInternal(e,9,r)}OPTION(e){return this.optionInternal(e,0)}OPTION1(e){return this.optionInternal(e,1)}OPTION2(e){return this.optionInternal(e,2)}OPTION3(e){return this.optionInternal(e,3)}OPTION4(e){return this.optionInternal(e,4)}OPTION5(e){return this.optionInternal(e,5)}OPTION6(e){return this.optionInternal(e,6)}OPTION7(e){return this.optionInternal(e,7)}OPTION8(e){return this.optionInternal(e,8)}OPTION9(e){return this.optionInternal(e,9)}OR(e){return this.orInternal(e,0)}OR1(e){return this.orInternal(e,1)}OR2(e){return this.orInternal(e,2)}OR3(e){return this.orInternal(e,3)}OR4(e){return this.orInternal(e,4)}OR5(e){return this.orInternal(e,5)}OR6(e){return this.orInternal(e,6)}OR7(e){return this.orInternal(e,7)}OR8(e){return this.orInternal(e,8)}OR9(e){return this.orInternal(e,9)}MANY(e){this.manyInternal(0,e)}MANY1(e){this.manyInternal(1,e)}MANY2(e){this.manyInternal(2,e)}MANY3(e){this.manyInternal(3,e)}MANY4(e){this.manyInternal(4,e)}MANY5(e){this.manyInternal(5,e)}MANY6(e){this.manyInternal(6,e)}MANY7(e){this.manyInternal(7,e)}MANY8(e){this.manyInternal(8,e)}MANY9(e){this.manyInternal(9,e)}MANY_SEP(e){this.manySepFirstInternal(0,e)}MANY_SEP1(e){this.manySepFirstInternal(1,e)}MANY_SEP2(e){this.manySepFirstInternal(2,e)}MANY_SEP3(e){this.manySepFirstInternal(3,e)}MANY_SEP4(e){this.manySepFirstInternal(4,e)}MANY_SEP5(e){this.manySepFirstInternal(5,e)}MANY_SEP6(e){this.manySepFirstInternal(6,e)}MANY_SEP7(e){this.manySepFirstInternal(7,e)}MANY_SEP8(e){this.manySepFirstInternal(8,e)}MANY_SEP9(e){this.manySepFirstInternal(9,e)}AT_LEAST_ONE(e){this.atLeastOneInternal(0,e)}AT_LEAST_ONE1(e){return this.atLeastOneInternal(1,e)}AT_LEAST_ONE2(e){this.atLeastOneInternal(2,e)}AT_LEAST_ONE3(e){this.atLeastOneInternal(3,e)}AT_LEAST_ONE4(e){this.atLeastOneInternal(4,e)}AT_LEAST_ONE5(e){this.atLeastOneInternal(5,e)}AT_LEAST_ONE6(e){this.atLeastOneInternal(6,e)}AT_LEAST_ONE7(e){this.atLeastOneInternal(7,e)}AT_LEAST_ONE8(e){this.atLeastOneInternal(8,e)}AT_LEAST_ONE9(e){this.atLeastOneInternal(9,e)}AT_LEAST_ONE_SEP(e){this.atLeastOneSepFirstInternal(0,e)}AT_LEAST_ONE_SEP1(e){this.atLeastOneSepFirstInternal(1,e)}AT_LEAST_ONE_SEP2(e){this.atLeastOneSepFirstInternal(2,e)}AT_LEAST_ONE_SEP3(e){this.atLeastOneSepFirstInternal(3,e)}AT_LEAST_ONE_SEP4(e){this.atLeastOneSepFirstInternal(4,e)}AT_LEAST_ONE_SEP5(e){this.atLeastOneSepFirstInternal(5,e)}AT_LEAST_ONE_SEP6(e){this.atLeastOneSepFirstInternal(6,e)}AT_LEAST_ONE_SEP7(e){this.atLeastOneSepFirstInternal(7,e)}AT_LEAST_ONE_SEP8(e){this.atLeastOneSepFirstInternal(8,e)}AT_LEAST_ONE_SEP9(e){this.atLeastOneSepFirstInternal(9,e)}RULE(e,r,n=Kg){if(qn(this.definedRulesNames,e)){let s={message:Pl.buildDuplicateRuleNameError({topLevelRule:e,grammarName:this.className}),type:zi.DUPLICATE_RULE_NAME,ruleName:e};this.definitionErrors.push(s)}this.definedRulesNames.push(e);let i=this.defineRule(e,r,n);return this[e]=i,i}OVERRIDE_RULE(e,r,n=Kg){let i=Sse(e,this.definedRulesNames,this.className);this.definitionErrors=this.definitionErrors.concat(i);let a=this.defineRule(e,r,n);return this[e]=a,a}BACKTRACK(e,r){return function(){this.isBackTrackingStack.push(1);let n=this.saveRecogState();try{return e.apply(this,r),!0}catch(i){if(lf(i))return!1;throw i}finally{this.reloadRecogState(n),this.isBackTrackingStack.pop()}}}getGAstProductions(){return this.gastProductionsCache}getSerializedGastProductions(){return Sk(br(this.gastProductionsCache))}}});var tE,Xse=N(()=>{"use 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+ For Further details.`)}if(Pt(e))this.tokensMap=Xr(e,(a,s)=>(a[s.name]=s,a),{});else if(Bt(e,"modes")&&Ma(qr(br(e.modes)),rse)){let a=qr(br(e.modes)),s=Bm(a);this.tokensMap=Xr(s,(l,u)=>(l[u.name]=u,l),{})}else if(bn(e))this.tokensMap=an(e);else throw new Error(" argument must be An Array of Token constructors, A dictionary of Token constructors or an IMultiModeLexerDefinition");this.tokensMap.EOF=lo;let n=Bt(e,"modes")?qr(br(e.modes)):br(e),i=Ma(n,a=>ur(a.categoryMatches));this.tokenMatcher=i?zg:Pu,Bu(br(this.tokensMap))}defineRule(e,r,n){if(this.selfAnalysisDone)throw Error(`Grammar rule <${e}> may not be defined after the 'performSelfAnalysis' method has been called' +Make sure that all grammar rule definitions are done before 'performSelfAnalysis' is called.`);let i=Bt(n,"resyncEnabled")?n.resyncEnabled:Kg.resyncEnabled,a=Bt(n,"recoveryValueFunc")?n.recoveryValueFunc:Kg.recoveryValueFunc,s=this.ruleShortNameIdx<<12;this.ruleShortNameIdx++,this.shortRuleNameToFull[s]=e,this.fullRuleNameToShort[e]=s;let l;return this.outputCst===!0?l=o(function(...f){try{this.ruleInvocationStateUpdate(s,e,this.subruleIdx),r.apply(this,f);let d=this.CST_STACK[this.CST_STACK.length-1];return this.cstPostRule(d),d}catch(d){return this.invokeRuleCatch(d,i,a)}finally{this.ruleFinallyStateUpdate()}},"invokeRuleWithTry"):l=o(function(...f){try{return this.ruleInvocationStateUpdate(s,e,this.subruleIdx),r.apply(this,f)}catch(d){return this.invokeRuleCatch(d,i,a)}finally{this.ruleFinallyStateUpdate()}},"invokeRuleWithTryCst"),Object.assign(l,{ruleName:e,originalGrammarAction:r})}invokeRuleCatch(e,r,n){let i=this.RULE_STACK.length===1,a=r&&!this.isBackTracking()&&this.recoveryEnabled;if(lf(e)){let s=e;if(a){let l=this.findReSyncTokenType();if(this.isInCurrentRuleReSyncSet(l))if(s.resyncedTokens=this.reSyncTo(l),this.outputCst){let u=this.CST_STACK[this.CST_STACK.length-1];return u.recoveredNode=!0,u}else return n(e);else{if(this.outputCst){let u=this.CST_STACK[this.CST_STACK.length-1];u.recoveredNode=!0,s.partialCstResult=u}throw s}}else{if(i)return this.moveToTerminatedState(),n(e);throw s}}else throw e}optionInternal(e,r){let n=this.getKeyForAutomaticLookahead(512,r);return this.optionInternalLogic(e,r,n)}optionInternalLogic(e,r,n){let i=this.getLaFuncFromCache(n),a;if(typeof e!="function"){a=e.DEF;let s=e.GATE;if(s!==void 0){let l=i;i=o(()=>s.call(this)&&l.call(this),"lookAheadFunc")}}else a=e;if(i.call(this)===!0)return a.call(this)}atLeastOneInternal(e,r){let n=this.getKeyForAutomaticLookahead(1024,e);return this.atLeastOneInternalLogic(e,r,n)}atLeastOneInternalLogic(e,r,n){let i=this.getLaFuncFromCache(n),a;if(typeof r!="function"){a=r.DEF;let s=r.GATE;if(s!==void 0){let l=i;i=o(()=>s.call(this)&&l.call(this),"lookAheadFunc")}}else a=r;if(i.call(this)===!0){let s=this.doSingleRepetition(a);for(;i.call(this)===!0&&s===!0;)s=this.doSingleRepetition(a)}else throw this.raiseEarlyExitException(e,jn.REPETITION_MANDATORY,r.ERR_MSG);this.attemptInRepetitionRecovery(this.atLeastOneInternal,[e,r],i,1024,e,Bk)}atLeastOneSepFirstInternal(e,r){let n=this.getKeyForAutomaticLookahead(1536,e);this.atLeastOneSepFirstInternalLogic(e,r,n)}atLeastOneSepFirstInternalLogic(e,r,n){let i=r.DEF,a=r.SEP;if(this.getLaFuncFromCache(n).call(this)===!0){i.call(this);let l=o(()=>this.tokenMatcher(this.LA(1),a),"separatorLookAheadFunc");for(;this.tokenMatcher(this.LA(1),a)===!0;)this.CONSUME(a),i.call(this);this.attemptInRepetitionRecovery(this.repetitionSepSecondInternal,[e,a,l,i,lx],l,1536,e,lx)}else throw this.raiseEarlyExitException(e,jn.REPETITION_MANDATORY_WITH_SEPARATOR,r.ERR_MSG)}manyInternal(e,r){let n=this.getKeyForAutomaticLookahead(768,e);return this.manyInternalLogic(e,r,n)}manyInternalLogic(e,r,n){let i=this.getLaFuncFromCache(n),a;if(typeof r!="function"){a=r.DEF;let l=r.GATE;if(l!==void 0){let u=i;i=o(()=>l.call(this)&&u.call(this),"lookaheadFunction")}}else a=r;let s=!0;for(;i.call(this)===!0&&s===!0;)s=this.doSingleRepetition(a);this.attemptInRepetitionRecovery(this.manyInternal,[e,r],i,768,e,Pk,s)}manySepFirstInternal(e,r){let n=this.getKeyForAutomaticLookahead(1280,e);this.manySepFirstInternalLogic(e,r,n)}manySepFirstInternalLogic(e,r,n){let i=r.DEF,a=r.SEP;if(this.getLaFuncFromCache(n).call(this)===!0){i.call(this);let l=o(()=>this.tokenMatcher(this.LA(1),a),"separatorLookAheadFunc");for(;this.tokenMatcher(this.LA(1),a)===!0;)this.CONSUME(a),i.call(this);this.attemptInRepetitionRecovery(this.repetitionSepSecondInternal,[e,a,l,i,ox],l,1280,e,ox)}}repetitionSepSecondInternal(e,r,n,i,a){for(;n();)this.CONSUME(r),i.call(this);this.attemptInRepetitionRecovery(this.repetitionSepSecondInternal,[e,r,n,i,a],n,1536,e,a)}doSingleRepetition(e){let r=this.getLexerPosition();return e.call(this),this.getLexerPosition()>r}orInternal(e,r){let n=this.getKeyForAutomaticLookahead(256,r),i=Pt(e)?e:e.DEF,s=this.getLaFuncFromCache(n).call(this,i);if(s!==void 0)return i[s].ALT.call(this);this.raiseNoAltException(r,e.ERR_MSG)}ruleFinallyStateUpdate(){if(this.RULE_STACK.pop(),this.RULE_OCCURRENCE_STACK.pop(),this.cstFinallyStateUpdate(),this.RULE_STACK.length===0&&this.isAtEndOfInput()===!1){let e=this.LA(1),r=this.errorMessageProvider.buildNotAllInputParsedMessage({firstRedundant:e,ruleName:this.getCurrRuleFullName()});this.SAVE_ERROR(new px(r,e))}}subruleInternal(e,r,n){let i;try{let a=n!==void 0?n.ARGS:void 0;return this.subruleIdx=r,i=e.apply(this,a),this.cstPostNonTerminal(i,n!==void 0&&n.LABEL!==void 0?n.LABEL:e.ruleName),i}catch(a){throw this.subruleInternalError(a,n,e.ruleName)}}subruleInternalError(e,r,n){throw lf(e)&&e.partialCstResult!==void 0&&(this.cstPostNonTerminal(e.partialCstResult,r!==void 0&&r.LABEL!==void 0?r.LABEL:n),delete e.partialCstResult),e}consumeInternal(e,r,n){let i;try{let a=this.LA(1);this.tokenMatcher(a,e)===!0?(this.consumeToken(),i=a):this.consumeInternalError(e,a,n)}catch(a){i=this.consumeInternalRecovery(e,r,a)}return this.cstPostTerminal(n!==void 0&&n.LABEL!==void 0?n.LABEL:e.name,i),i}consumeInternalError(e,r,n){let i,a=this.LA(0);throw n!==void 0&&n.ERR_MSG?i=n.ERR_MSG:i=this.errorMessageProvider.buildMismatchTokenMessage({expected:e,actual:r,previous:a,ruleName:this.getCurrRuleFullName()}),this.SAVE_ERROR(new hp(i,r,a))}consumeInternalRecovery(e,r,n){if(this.recoveryEnabled&&n.name==="MismatchedTokenException"&&!this.isBackTracking()){let i=this.getFollowsForInRuleRecovery(e,r);try{return this.tryInRuleRecovery(e,i)}catch(a){throw a.name===zN?n:a}}else throw n}saveRecogState(){let e=this.errors,r=an(this.RULE_STACK);return{errors:e,lexerState:this.exportLexerState(),RULE_STACK:r,CST_STACK:this.CST_STACK}}reloadRecogState(e){this.errors=e.errors,this.importLexerState(e.lexerState),this.RULE_STACK=e.RULE_STACK}ruleInvocationStateUpdate(e,r,n){this.RULE_OCCURRENCE_STACK.push(n),this.RULE_STACK.push(e),this.cstInvocationStateUpdate(r)}isBackTracking(){return this.isBackTrackingStack.length!==0}getCurrRuleFullName(){let e=this.getLastExplicitRuleShortName();return this.shortRuleNameToFull[e]}shortRuleNameToFullName(e){return this.shortRuleNameToFull[e]}isAtEndOfInput(){return this.tokenMatcher(this.LA(1),lo)}reset(){this.resetLexerState(),this.subruleIdx=0,this.isBackTrackingStack=[],this.errors=[],this.RULE_STACK=[],this.CST_STACK=[],this.RULE_OCCURRENCE_STACK=[]}}});var rE,jse=N(()=>{"use strict";Xg();qt();qg();Fs();rE=class{static{o(this,"ErrorHandler")}initErrorHandler(e){this._errors=[],this.errorMessageProvider=Bt(e,"errorMessageProvider")?e.errorMessageProvider:ls.errorMessageProvider}SAVE_ERROR(e){if(lf(e))return e.context={ruleStack:this.getHumanReadableRuleStack(),ruleOccurrenceStack:an(this.RULE_OCCURRENCE_STACK)},this._errors.push(e),e;throw Error("Trying to save an Error which is not a RecognitionException")}get errors(){return an(this._errors)}set errors(e){this._errors=e}raiseEarlyExitException(e,r,n){let i=this.getCurrRuleFullName(),a=this.getGAstProductions()[i],l=Wg(e,a,r,this.maxLookahead)[0],u=[];for(let f=1;f<=this.maxLookahead;f++)u.push(this.LA(f));let h=this.errorMessageProvider.buildEarlyExitMessage({expectedIterationPaths:l,actual:u,previous:this.LA(0),customUserDescription:n,ruleName:i});throw this.SAVE_ERROR(new mx(h,this.LA(1),this.LA(0)))}raiseNoAltException(e,r){let n=this.getCurrRuleFullName(),i=this.getGAstProductions()[n],a=Hg(e,i,this.maxLookahead),s=[];for(let h=1;h<=this.maxLookahead;h++)s.push(this.LA(h));let l=this.LA(0),u=this.errorMessageProvider.buildNoViableAltMessage({expectedPathsPerAlt:a,actual:s,previous:l,customUserDescription:r,ruleName:this.getCurrRuleFullName()});throw this.SAVE_ERROR(new dx(u,this.LA(1),l))}}});var nE,Kse=N(()=>{"use strict";cx();qt();nE=class{static{o(this,"ContentAssist")}initContentAssist(){}computeContentAssist(e,r){let n=this.gastProductionsCache[e];if(pr(n))throw Error(`Rule ->${e}<- does not exist in this grammar.`);return $k([n],r,this.tokenMatcher,this.maxLookahead)}getNextPossibleTokenTypes(e){let r=ia(e.ruleStack),i=this.getGAstProductions()[r];return new Ok(i,e).startWalking()}}});function yx(t,e,r,n=!1){aE(r);let i=ga(this.recordingProdStack),a=Si(e)?e:e.DEF,s=new t({definition:[],idx:r});return n&&(s.separator=e.SEP),Bt(e,"MAX_LOOKAHEAD")&&(s.maxLookahead=e.MAX_LOOKAHEAD),this.recordingProdStack.push(s),a.call(this),i.definition.push(s),this.recordingProdStack.pop(),sE}function dBe(t,e){aE(e);let r=ga(this.recordingProdStack),n=Pt(t)===!1,i=n===!1?t:t.DEF,a=new Tn({definition:[],idx:e,ignoreAmbiguities:n&&t.IGNORE_AMBIGUITIES===!0});Bt(t,"MAX_LOOKAHEAD")&&(a.maxLookahead=t.MAX_LOOKAHEAD);let s=A2(i,l=>Si(l.GATE));return a.hasPredicates=s,r.definition.push(a),Ae(i,l=>{let u=new Dn({definition:[]});a.definition.push(u),Bt(l,"IGNORE_AMBIGUITIES")?u.ignoreAmbiguities=l.IGNORE_AMBIGUITIES:Bt(l,"GATE")&&(u.ignoreAmbiguities=!0),this.recordingProdStack.push(u),l.ALT.call(this),this.recordingProdStack.pop()}),sE}function Jse(t){return t===0?"":`${t}`}function aE(t){if(t<0||t>Zse){let e=new Error(`Invalid DSL Method idx value: <${t}> + Idx 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You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true). +`+this.showPosition(),{text:"",token:null,line:this.yylineno});return this},"reject"),less:o(function(q){this.unput(this.match.slice(q))},"less"),pastInput:o(function(){var q=this.matched.substr(0,this.matched.length-this.match.length);return(q.length>20?"...":"")+q.substr(-20).replace(/\n/g,"")},"pastInput"),upcomingInput:o(function(){var q=this.match;return q.length<20&&(q+=this._input.substr(0,20-q.length)),(q.substr(0,20)+(q.length>20?"...":"")).replace(/\n/g,"")},"upcomingInput"),showPosition:o(function(){var q=this.pastInput(),pe=new Array(q.length+1).join("-");return q+this.upcomingInput()+` +`+pe+"^"},"showPosition"),test_match:o(function(q,pe){var ve,Pe,_e;if(this.options.backtrack_lexer&&(_e={yylineno:this.yylineno,yylloc:{first_line:this.yylloc.first_line,last_line:this.last_line,first_column:this.yylloc.first_column,last_column:this.yylloc.last_column},yytext:this.yytext,match:this.match,matches:this.matches,matched:this.matched,yyleng:this.yyleng,offset:this.offset,_more:this._more,_input:this._input,yy:this.yy,conditionStack:this.conditionStack.slice(0),done:this.done},this.options.ranges&&(_e.yylloc.range=this.yylloc.range.slice(0))),Pe=q[0].match(/(?:\r\n?|\n).*/g),Pe&&(this.yylineno+=Pe.length),this.yylloc={first_line:this.yylloc.last_line,last_line:this.yylineno+1,first_column:this.yylloc.last_column,last_column:Pe?Pe[Pe.length-1].length-Pe[Pe.length-1].match(/\r?\n?/)[0].length:this.yylloc.last_column+q[0].length},this.yytext+=q[0],this.match+=q[0],this.matches=q,this.yyleng=this.yytext.length,this.options.ranges&&(this.yylloc.range=[this.offset,this.offset+=this.yyleng]),this._more=!1,this._backtrack=!1,this._input=this._input.slice(q[0].length),this.matched+=q[0],ve=this.performAction.call(this,this.yy,this,pe,this.conditionStack[this.conditionStack.length-1]),this.done&&this._input&&(this.done=!1),ve)return ve;if(this._backtrack){for(var we in _e)this[we]=_e[we];return!1}return!1},"test_match"),next:o(function(){if(this.done)return this.EOF;this._input||(this.done=!0);var q,pe,ve,Pe;this._more||(this.yytext="",this.match="");for(var _e=this._currentRules(),we=0;we<_e.length;we++)if(ve=this._input.match(this.rules[_e[we]]),ve&&(!pe||ve[0].length>pe[0].length)){if(pe=ve,Pe=we,this.options.backtrack_lexer){if(q=this.test_match(ve,_e[we]),q!==!1)return q;if(this._backtrack){pe=!1;continue}else return!1}else if(!this.options.flex)break}return pe?(q=this.test_match(pe,_e[Pe]),q!==!1?q:!1):this._input===""?this.EOF:this.parseError("Lexical error on line "+(this.yylineno+1)+`. Unrecognized text. +`+this.showPosition(),{text:"",token:null,line:this.yylineno})},"next"),lex:o(function(){var pe=this.next();return pe||this.lex()},"lex"),begin:o(function(pe){this.conditionStack.push(pe)},"begin"),popState:o(function(){var pe=this.conditionStack.length-1;return pe>0?this.conditionStack.pop():this.conditionStack[0]},"popState"),_currentRules:o(function(){return this.conditionStack.length&&this.conditionStack[this.conditionStack.length-1]?this.conditions[this.conditionStack[this.conditionStack.length-1]].rules:this.conditions.INITIAL.rules},"_currentRules"),topState:o(function(pe){return pe=this.conditionStack.length-1-Math.abs(pe||0),pe>=0?this.conditionStack[pe]:"INITIAL"},"topState"),pushState:o(function(pe){this.begin(pe)},"pushState"),stateStackSize:o(function(){return this.conditionStack.length},"stateStackSize"),options:{"case-insensitive":!0},performAction:o(function(pe,ve,Pe,_e){var we=_e;switch(Pe){case 0:break;case 1:break;case 2:return 55;case 3:break;case 4:return this.begin("title"),35;break;case 5:return this.popState(),"title_value";break;case 6:return this.begin("acc_title"),37;break;case 7:return this.popState(),"acc_title_value";break;case 8:return this.begin("acc_descr"),39;break;case 9:return this.popState(),"acc_descr_value";break;case 10:this.begin("acc_descr_multiline");break;case 11:this.popState();break;case 12:return"acc_descr_multiline_value";case 13:return 48;case 14:return 50;case 15:return 49;case 16:return 51;case 17:return 52;case 18:return 53;case 19:return 54;case 20:return 25;case 21:this.begin("md_string");break;case 22:return"MD_STR";case 23:this.popState();break;case 24:this.begin("string");break;case 25:this.popState();break;case 26:return"STR";case 27:this.begin("class_name");break;case 28:return this.popState(),47;break;case 29:return this.begin("point_start"),44;break;case 30:return this.begin("point_x"),45;break;case 31:this.popState();break;case 32:this.popState(),this.begin("point_y");break;case 33:return this.popState(),46;break;case 34:return 28;case 35:return 4;case 36:return 11;case 37:return 64;case 38:return 10;case 39:return 65;case 40:return 65;case 41:return 14;case 42:return 13;case 43:return 67;case 44:return 66;case 45:return 12;case 46:return 8;case 47:return 5;case 48:return 18;case 49:return 56;case 50:return 63;case 51:return 57}},"anonymous"),rules:[/^(?:%%(?!\{)[^\n]*)/i,/^(?:[^\}]%%[^\n]*)/i,/^(?:[\n\r]+)/i,/^(?:%%[^\n]*)/i,/^(?:title\b)/i,/^(?:(?!\n||)*[^\n]*)/i,/^(?:accTitle\s*:\s*)/i,/^(?:(?!\n||)*[^\n]*)/i,/^(?:accDescr\s*:\s*)/i,/^(?:(?!\n||)*[^\n]*)/i,/^(?:accDescr\s*\{\s*)/i,/^(?:[\}])/i,/^(?:[^\}]*)/i,/^(?: *x-axis *)/i,/^(?: *y-axis *)/i,/^(?: *--+> *)/i,/^(?: *quadrant-1 *)/i,/^(?: *quadrant-2 *)/i,/^(?: *quadrant-3 *)/i,/^(?: *quadrant-4 *)/i,/^(?:classDef\b)/i,/^(?:["][`])/i,/^(?:[^`"]+)/i,/^(?:[`]["])/i,/^(?:["])/i,/^(?:["])/i,/^(?:[^"]*)/i,/^(?::::)/i,/^(?:^\w+)/i,/^(?:\s*:\s*\[\s*)/i,/^(?:(1)|(0(.\d+)?))/i,/^(?:\s*\] *)/i,/^(?:\s*,\s*)/i,/^(?:(1)|(0(.\d+)?))/i,/^(?: *quadrantChart *)/i,/^(?:[A-Za-z]+)/i,/^(?::)/i,/^(?:\+)/i,/^(?:,)/i,/^(?:=)/i,/^(?:=)/i,/^(?:\*)/i,/^(?:#)/i,/^(?:[\_])/i,/^(?:\.)/i,/^(?:&)/i,/^(?:-)/i,/^(?:[0-9]+)/i,/^(?:\s)/i,/^(?:;)/i,/^(?:[!"#$%&'*+,-.`?\\_/])/i,/^(?:$)/i],conditions:{class_name:{rules:[28],inclusive:!1},point_y:{rules:[33],inclusive:!1},point_x:{rules:[32],inclusive:!1},point_start:{rules:[30,31],inclusive:!1},acc_descr_multiline:{rules:[11,12],inclusive:!1},acc_descr:{rules:[9],inclusive:!1},acc_title:{rules:[7],inclusive:!1},title:{rules:[5],inclusive:!1},md_string:{rules:[22,23],inclusive:!1},string:{rules:[25,26],inclusive:!1},INITIAL:{rules:[0,1,2,3,4,6,8,10,13,14,15,16,17,18,19,20,21,24,27,29,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51],inclusive:!0}}};return xe}();re.lexer=oe;function V(){this.yy={}}return o(V,"Parser"),V.prototype=re,re.Parser=V,new V}();hO.parser=hO;uhe=hO});var ms,y6,fhe=N(()=>{"use strict";dr();Ya();vt();_y();ms=oh(),y6=class{constructor(){this.classes=new Map;this.config=this.getDefaultConfig(),this.themeConfig=this.getDefaultThemeConfig(),this.data=this.getDefaultData()}static{o(this,"QuadrantBuilder")}getDefaultData(){return{titleText:"",quadrant1Text:"",quadrant2Text:"",quadrant3Text:"",quadrant4Text:"",xAxisLeftText:"",xAxisRightText:"",yAxisBottomText:"",yAxisTopText:"",points:[]}}getDefaultConfig(){return{showXAxis:!0,showYAxis:!0,showTitle:!0,chartHeight:or.quadrantChart?.chartWidth||500,chartWidth:or.quadrantChart?.chartHeight||500,titlePadding:or.quadrantChart?.titlePadding||10,titleFontSize:or.quadrantChart?.titleFontSize||20,quadrantPadding:or.quadrantChart?.quadrantPadding||5,xAxisLabelPadding:or.quadrantChart?.xAxisLabelPadding||5,yAxisLabelPadding:or.quadrantChart?.yAxisLabelPadding||5,xAxisLabelFontSize:or.quadrantChart?.xAxisLabelFontSize||16,yAxisLabelFontSize:or.quadrantChart?.yAxisLabelFontSize||16,quadrantLabelFontSize:or.quadrantChart?.quadrantLabelFontSize||16,quadrantTextTopPadding:or.quadrantChart?.quadrantTextTopPadding||5,pointTextPadding:or.quadrantChart?.pointTextPadding||5,pointLabelFontSize:or.quadrantChart?.pointLabelFontSize||12,pointRadius:or.quadrantChart?.pointRadius||5,xAxisPosition:or.quadrantChart?.xAxisPosition||"top",yAxisPosition:or.quadrantChart?.yAxisPosition||"left",quadrantInternalBorderStrokeWidth:or.quadrantChart?.quadrantInternalBorderStrokeWidth||1,quadrantExternalBorderStrokeWidth:or.quadrantChart?.quadrantExternalBorderStrokeWidth||2}}getDefaultThemeConfig(){return{quadrant1Fill:ms.quadrant1Fill,quadrant2Fill:ms.quadrant2Fill,quadrant3Fill:ms.quadrant3Fill,quadrant4Fill:ms.quadrant4Fill,quadrant1TextFill:ms.quadrant1TextFill,quadrant2TextFill:ms.quadrant2TextFill,quadrant3TextFill:ms.quadrant3TextFill,quadrant4TextFill:ms.quadrant4TextFill,quadrantPointFill:ms.quadrantPointFill,quadrantPointTextFill:ms.quadrantPointTextFill,quadrantXAxisTextFill:ms.quadrantXAxisTextFill,quadrantYAxisTextFill:ms.quadrantYAxisTextFill,quadrantTitleFill:ms.quadrantTitleFill,quadrantInternalBorderStrokeFill:ms.quadrantInternalBorderStrokeFill,quadrantExternalBorderStrokeFill:ms.quadrantExternalBorderStrokeFill}}clear(){this.config=this.getDefaultConfig(),this.themeConfig=this.getDefaultThemeConfig(),this.data=this.getDefaultData(),this.classes=new Map,Y.info("clear called")}setData(e){this.data={...this.data,...e}}addPoints(e){this.data.points=[...e,...this.data.points]}addClass(e,r){this.classes.set(e,r)}setConfig(e){Y.trace("setConfig called with: ",e),this.config={...this.config,...e}}setThemeConfig(e){Y.trace("setThemeConfig called with: ",e),this.themeConfig={...this.themeConfig,...e}}calculateSpace(e,r,n,i){let a=this.config.xAxisLabelPadding*2+this.config.xAxisLabelFontSize,s={top:e==="top"&&r?a:0,bottom:e==="bottom"&&r?a:0},l=this.config.yAxisLabelPadding*2+this.config.yAxisLabelFontSize,u={left:this.config.yAxisPosition==="left"&&n?l:0,right:this.config.yAxisPosition==="right"&&n?l:0},h=this.config.titleFontSize+this.config.titlePadding*2,f={top:i?h:0},d=this.config.quadrantPadding+u.left,p=this.config.quadrantPadding+s.top+f.top,m=this.config.chartWidth-this.config.quadrantPadding*2-u.left-u.right,g=this.config.chartHeight-this.config.quadrantPadding*2-s.top-s.bottom-f.top,y=m/2,v=g/2;return{xAxisSpace:s,yAxisSpace:u,titleSpace:f,quadrantSpace:{quadrantLeft:d,quadrantTop:p,quadrantWidth:m,quadrantHalfWidth:y,quadrantHeight:g,quadrantHalfHeight:v}}}getAxisLabels(e,r,n,i){let{quadrantSpace:a,titleSpace:s}=i,{quadrantHalfHeight:l,quadrantHeight:u,quadrantLeft:h,quadrantHalfWidth:f,quadrantTop:d,quadrantWidth:p}=a,m=!!this.data.xAxisRightText,g=!!this.data.yAxisTopText,y=[];return this.data.xAxisLeftText&&r&&y.push({text:this.data.xAxisLeftText,fill:this.themeConfig.quadrantXAxisTextFill,x:h+(m?f/2:0),y:e==="top"?this.config.xAxisLabelPadding+s.top:this.config.xAxisLabelPadding+d+u+this.config.quadrantPadding,fontSize:this.config.xAxisLabelFontSize,verticalPos:m?"center":"left",horizontalPos:"top",rotation:0}),this.data.xAxisRightText&&r&&y.push({text:this.data.xAxisRightText,fill:this.themeConfig.quadrantXAxisTextFill,x:h+f+(m?f/2:0),y:e==="top"?this.config.xAxisLabelPadding+s.top:this.config.xAxisLabelPadding+d+u+this.config.quadrantPadding,fontSize:this.config.xAxisLabelFontSize,verticalPos:m?"center":"left",horizontalPos:"top",rotation:0}),this.data.yAxisBottomText&&n&&y.push({text:this.data.yAxisBottomText,fill:this.themeConfig.quadrantYAxisTextFill,x:this.config.yAxisPosition==="left"?this.config.yAxisLabelPadding:this.config.yAxisLabelPadding+h+p+this.config.quadrantPadding,y:d+u-(g?l/2:0),fontSize:this.config.yAxisLabelFontSize,verticalPos:g?"center":"left",horizontalPos:"top",rotation:-90}),this.data.yAxisTopText&&n&&y.push({text:this.data.yAxisTopText,fill:this.themeConfig.quadrantYAxisTextFill,x:this.config.yAxisPosition==="left"?this.config.yAxisLabelPadding:this.config.yAxisLabelPadding+h+p+this.config.quadrantPadding,y:d+l-(g?l/2:0),fontSize:this.config.yAxisLabelFontSize,verticalPos:g?"center":"left",horizontalPos:"top",rotation:-90}),y}getQuadrants(e){let{quadrantSpace:r}=e,{quadrantHalfHeight:n,quadrantLeft:i,quadrantHalfWidth:a,quadrantTop:s}=r,l=[{text:{text:this.data.quadrant1Text,fill:this.themeConfig.quadrant1TextFill,x:0,y:0,fontSize:this.config.quadrantLabelFontSize,verticalPos:"center",horizontalPos:"middle",rotation:0},x:i+a,y:s,width:a,height:n,fill:this.themeConfig.quadrant1Fill},{text:{text:this.data.quadrant2Text,fill:this.themeConfig.quadrant2TextFill,x:0,y:0,fontSize:this.config.quadrantLabelFontSize,verticalPos:"center",horizontalPos:"middle",rotation:0},x:i,y:s,width:a,height:n,fill:this.themeConfig.quadrant2Fill},{text:{text:this.data.quadrant3Text,fill:this.themeConfig.quadrant3TextFill,x:0,y:0,fontSize:this.config.quadrantLabelFontSize,verticalPos:"center",horizontalPos:"middle",rotation:0},x:i,y:s+n,width:a,height:n,fill:this.themeConfig.quadrant3Fill},{text:{text:this.data.quadrant4Text,fill:this.themeConfig.quadrant4TextFill,x:0,y:0,fontSize:this.config.quadrantLabelFontSize,verticalPos:"center",horizontalPos:"middle",rotation:0},x:i+a,y:s+n,width:a,height:n,fill:this.themeConfig.quadrant4Fill}];for(let u of l)u.text.x=u.x+u.width/2,this.data.points.length===0?(u.text.y=u.y+u.height/2,u.text.horizontalPos="middle"):(u.text.y=u.y+this.config.quadrantTextTopPadding,u.text.horizontalPos="top");return l}getQuadrantPoints(e){let{quadrantSpace:r}=e,{quadrantHeight:n,quadrantLeft:i,quadrantTop:a,quadrantWidth:s}=r,l=gl().domain([0,1]).range([i,s+i]),u=gl().domain([0,1]).range([n+a,a]);return this.data.points.map(f=>{let d=this.classes.get(f.className);return d&&(f={...d,...f}),{x:l(f.x),y:u(f.y),fill:f.color??this.themeConfig.quadrantPointFill,radius:f.radius??this.config.pointRadius,text:{text:f.text,fill:this.themeConfig.quadrantPointTextFill,x:l(f.x),y:u(f.y)+this.config.pointTextPadding,verticalPos:"center",horizontalPos:"top",fontSize:this.config.pointLabelFontSize,rotation:0},strokeColor:f.strokeColor??this.themeConfig.quadrantPointFill,strokeWidth:f.strokeWidth??"0px"}})}getBorders(e){let r=this.config.quadrantExternalBorderStrokeWidth/2,{quadrantSpace:n}=e,{quadrantHalfHeight:i,quadrantHeight:a,quadrantLeft:s,quadrantHalfWidth:l,quadrantTop:u,quadrantWidth:h}=n;return[{strokeFill:this.themeConfig.quadrantExternalBorderStrokeFill,strokeWidth:this.config.quadrantExternalBorderStrokeWidth,x1:s-r,y1:u,x2:s+h+r,y2:u},{strokeFill:this.themeConfig.quadrantExternalBorderStrokeFill,strokeWidth:this.config.quadrantExternalBorderStrokeWidth,x1:s+h,y1:u+r,x2:s+h,y2:u+a-r},{strokeFill:this.themeConfig.quadrantExternalBorderStrokeFill,strokeWidth:this.config.quadrantExternalBorderStrokeWidth,x1:s-r,y1:u+a,x2:s+h+r,y2:u+a},{strokeFill:this.themeConfig.quadrantExternalBorderStrokeFill,strokeWidth:this.config.quadrantExternalBorderStrokeWidth,x1:s,y1:u+r,x2:s,y2:u+a-r},{strokeFill:this.themeConfig.quadrantInternalBorderStrokeFill,strokeWidth:this.config.quadrantInternalBorderStrokeWidth,x1:s+l,y1:u+r,x2:s+l,y2:u+a-r},{strokeFill:this.themeConfig.quadrantInternalBorderStrokeFill,strokeWidth:this.config.quadrantInternalBorderStrokeWidth,x1:s+r,y1:u+i,x2:s+h-r,y2:u+i}]}getTitle(e){if(e)return{text:this.data.titleText,fill:this.themeConfig.quadrantTitleFill,fontSize:this.config.titleFontSize,horizontalPos:"top",verticalPos:"center",rotation:0,y:this.config.titlePadding,x:this.config.chartWidth/2}}build(){let e=this.config.showXAxis&&!!(this.data.xAxisLeftText||this.data.xAxisRightText),r=this.config.showYAxis&&!!(this.data.yAxisTopText||this.data.yAxisBottomText),n=this.config.showTitle&&!!this.data.titleText,i=this.data.points.length>0?"bottom":this.config.xAxisPosition,a=this.calculateSpace(i,e,r,n);return{points:this.getQuadrantPoints(a),quadrants:this.getQuadrants(a),axisLabels:this.getAxisLabels(i,e,r,a),borderLines:this.getBorders(a),title:this.getTitle(n)}}}});function fO(t){return!/^#?([\dA-Fa-f]{6}|[\dA-Fa-f]{3})$/.test(t)}function dhe(t){return!/^\d+$/.test(t)}function phe(t){return!/^\d+px$/.test(t)}var Ap,mhe=N(()=>{"use strict";Ap=class extends Error{static{o(this,"InvalidStyleError")}constructor(e,r,n){super(`value for ${e} ${r} is invalid, please use a valid ${n}`),this.name="InvalidStyleError"}};o(fO,"validateHexCode");o(dhe,"validateNumber");o(phe,"validateSizeInPixels")});function Xu(t){return Tr(t.trim(),pGe)}function mGe(t){ba.setData({quadrant1Text:Xu(t.text)})}function gGe(t){ba.setData({quadrant2Text:Xu(t.text)})}function yGe(t){ba.setData({quadrant3Text:Xu(t.text)})}function vGe(t){ba.setData({quadrant4Text:Xu(t.text)})}function xGe(t){ba.setData({xAxisLeftText:Xu(t.text)})}function bGe(t){ba.setData({xAxisRightText:Xu(t.text)})}function wGe(t){ba.setData({yAxisTopText:Xu(t.text)})}function TGe(t){ba.setData({yAxisBottomText:Xu(t.text)})}function dO(t){let e={};for(let r of t){let[n,i]=r.trim().split(/\s*:\s*/);if(n==="radius"){if(dhe(i))throw new Ap(n,i,"number");e.radius=parseInt(i)}else if(n==="color"){if(fO(i))throw new Ap(n,i,"hex code");e.color=i}else if(n==="stroke-color"){if(fO(i))throw new Ap(n,i,"hex code");e.strokeColor=i}else if(n==="stroke-width"){if(phe(i))throw new Ap(n,i,"number of pixels (eg. 10px)");e.strokeWidth=i}else throw new Error(`style named ${n} is not supported.`)}return e}function kGe(t,e,r,n,i){let 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this.textDimensionCalculator.getMaxDimension(this.getTickValues().map(e=>e.toString()),this.axisConfig.labelFontSize)}recalculateOuterPaddingToDrawBar(){.7*this.getTickDistance()>this.outerPadding*2&&(this.outerPadding=Math.floor(.7*this.getTickDistance()/2)),this.recalculateScale()}calculateSpaceIfDrawnHorizontally(e){let r=e.height;if(this.axisConfig.showAxisLine&&r>this.axisConfig.axisLineWidth&&(r-=this.axisConfig.axisLineWidth,this.showAxisLine=!0),this.axisConfig.showLabel){let n=this.getLabelDimension(),i=.2*e.width;this.outerPadding=Math.min(n.width/2,i);let a=n.height+this.axisConfig.labelPadding*2;this.labelTextHeight=n.height,a<=r&&(r-=a,this.showLabel=!0)}if(this.axisConfig.showTick&&r>=this.axisConfig.tickLength&&(this.showTick=!0,r-=this.axisConfig.tickLength),this.axisConfig.showTitle&&this.title){let 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n=this.textDimensionCalculator.getMaxDimension([this.title],this.axisConfig.titleFontSize),i=n.height+this.axisConfig.titlePadding*2;this.titleTextHeight=n.height,i<=r&&(r-=i,this.showTitle=!0)}this.boundingRect.width=e.width-r,this.boundingRect.height=e.height}calculateSpace(e){return this.axisPosition==="left"||this.axisPosition==="right"?this.calculateSpaceIfDrawnVertical(e):this.calculateSpaceIfDrawnHorizontally(e),this.recalculateScale(),{width:this.boundingRect.width,height:this.boundingRect.height}}setBoundingBoxXY(e){this.boundingRect.x=e.x,this.boundingRect.y=e.y}getDrawableElementsForLeftAxis(){let e=[];if(this.showAxisLine){let r=this.boundingRect.x+this.boundingRect.width-this.axisConfig.axisLineWidth/2;e.push({type:"path",groupTexts:["left-axis","axisl-line"],data:[{path:`M ${r},${this.boundingRect.y} L ${r},${this.boundingRect.y+this.boundingRect.height} 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this.showTitle&&e.push({type:"text",groupTexts:["left-axis","title"],data:[{text:this.title,x:this.boundingRect.x+this.axisConfig.titlePadding,y:this.boundingRect.y+this.boundingRect.height/2,fill:this.axisThemeConfig.titleColor,fontSize:this.axisConfig.titleFontSize,rotation:270,verticalPos:"top",horizontalPos:"center"}]}),e}getDrawableElementsForBottomAxis(){let e=[];if(this.showAxisLine){let r=this.boundingRect.y+this.axisConfig.axisLineWidth/2;e.push({type:"path",groupTexts:["bottom-axis","axis-line"],data:[{path:`M ${this.boundingRect.x},${r} L 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this.showTitle&&e.push({type:"text",groupTexts:["bottom-axis","title"],data:[{text:this.title,x:this.range[0]+(this.range[1]-this.range[0])/2,y:this.boundingRect.y+this.boundingRect.height-this.axisConfig.titlePadding-this.titleTextHeight,fill:this.axisThemeConfig.titleColor,fontSize:this.axisConfig.titleFontSize,rotation:0,verticalPos:"top",horizontalPos:"center"}]}),e}getDrawableElementsForTopAxis(){let e=[];if(this.showAxisLine){let r=this.boundingRect.y+this.boundingRect.height-this.axisConfig.axisLineWidth/2;e.push({type:"path",groupTexts:["top-axis","axis-line"],data:[{path:`M ${this.boundingRect.x},${r} L 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68:this.$=ve[_e-1]+ve[_e];break}},"anonymous"),table:[{3:1,4:2,6:e,9:r,11:n,13:i},{1:[3]},{3:8,4:2,5:[1,7],6:e,9:r,11:n,13:i},{5:[1,9]},{10:[1,10]},{12:[1,11]},t(a,[2,6]),{3:12,4:2,6:e,9:r,11:n,13:i},{1:[2,2]},{4:17,5:s,7:13,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},t(a,[2,4]),t(a,[2,5]),{1:[2,1]},{8:[1,41]},{4:17,5:s,7:42,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:43,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:44,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:45,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:46,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:47,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:48,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:49,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{4:17,5:s,7:50,8:l,9:r,11:n,13:i,14:14,15:15,16:16,17:18,18:19,19:20,20:21,21:u,22:h,23:f,24:d,25:23,33:25,41:p,42:m,43:g,44:y,45:v,46:x,54:b,72:w,74:C,77:T,89:E,90:A},{26:51,89:[1,52],90:[1,53]},{55:54,89:[1,55],90:[1,56]},{29:[1,59],61:[1,57],63:[1,58]},t(S,[2,17]),t(S,[2,18]),t(S,[2,19]),t(S,[2,20]),{30:60,33:62,75:_,89:E,90:A},{30:63,33:62,75:_,89:E,90:A},{30:64,33:62,75:_,89:E,90:A},t(I,[2,29]),t(I,[2,30]),t(I,[2,31]),t(I,[2,32]),t(I,[2,33]),t(I,[2,34]),t(D,[2,81]),t(D,[2,82]),{1:[2,3]},{8:[2,8]},{8:[2,9]},{8:[2,10]},{8:[2,11]},{8:[2,12]},{8:[2,13]},{8:[2,14]},{8:[2,15]},{8:[2,16]},{27:[1,65],29:[1,66]},t(k,[2,79]),t(k,[2,80]),{27:[1,67],29:[1,68]},t(k,[2,85]),t(k,[2,86]),{62:69,65:L,66:R,67:O,68:M,69:B,70:F,71:P},{62:77,65:L,66:R,67:O,68:M,69:B,70:F,71:P},{30:78,33:62,75:_,89:E,90:A},{73:79,75:z,76:$,78:81,79:82,80:H,81:Q,82:j,83:ie,84:ne,85:le,86:he,87:K,88:X},t(te,[2,60]),t(te,[2,62]),{73:93,75:z,76:$,78:81,79:82,80:H,81:Q,82:j,83:ie,84:ne,85:le,86:he,87:K,88:X},{30:94,33:62,75:_,76:$,89:E,90:A},{5:[1,95]},{30:96,33:62,75:_,89:E,90:A},{5:[1,97]},{30:98,33:62,75:_,89:E,90:A},{63:[1,99]},t(J,[2,50]),t(J,[2,51]),t(J,[2,52]),t(J,[2,53]),t(J,[2,54]),t(J,[2,55]),t(J,[2,56]),{64:[1,100]},t(S,[2,59],{76:$}),t(S,[2,64],{76:se}),{33:103,75:[1,102],89:E,90:A},t(ue,[2,65],{79:104,75:z,80:H,81:Q,82:j,83:ie,84:ne,85:le,86:he,87:K,88:X}),t(Z,[2,67]),t(Z,[2,69]),t(Z,[2,70]),t(Z,[2,71]),t(Z,[2,72]),t(Z,[2,73]),t(Z,[2,74]),t(Z,[2,75]),t(Z,[2,76]),t(Z,[2,77]),t(Z,[2,78]),t(S,[2,57],{76:se}),t(S,[2,58],{76:$}),{5:Se,28:105,31:ce,34:ae,36:Oe,38:ge,40:ze},{27:[1,112],76:$},{5:He,40:$e,56:113,57:Re,59:Ie},{27:[1,118],76:$},{33:119,89:E,90:A},{33:120,89:E,90:A},{75:z,78:121,79:82,80:H,81:Q,82:j,83:ie,84:ne,85:le,86:he,87:K,88:X},t(te,[2,61]),t(te,[2,63]),t(Z,[2,68]),t(S,[2,21]),{32:[1,122]},{32:[1,123]},{32:[1,124]},{32:[1,125]},{5:Se,28:126,31:ce,34:ae,36:Oe,38:ge,40:ze},t(S,[2,28]),{5:[1,127]},t(S,[2,42]),{32:[1,128]},{32:[1,129]},{5:He,40:$e,56:130,57:Re,59:Ie},t(S,[2,47]),{5:[1,131]},t(S,[2,48]),t(S,[2,49]),t(ue,[2,66],{79:104,75:z,80:H,81:Q,82:j,83:ie,84:ne,85:le,86:he,87:K,88:X}),{33:132,89:E,90:A},{35:133,89:[1,134],90:[1,135]},{37:136,47:[1,137],48:[1,138],49:[1,139]},{39:140,50:[1,141],51:[1,142],52:[1,143],53:[1,144]},t(S,[2,27]),{5:Se,28:145,31:ce,34:ae,36:Oe,38:ge,40:ze},{58:146,89:[1,147],90:[1,148]},{60:149,89:[1,150],90:[1,151]},t(S,[2,46]),{5:He,40:$e,56:152,57:Re,59:Ie},{5:[1,153]},{5:[1,154]},{5:[2,83]},{5:[2,84]},{5:[1,155]},{5:[2,35]},{5:[2,36]},{5:[2,37]},{5:[1,156]},{5:[2,38]},{5:[2,39]},{5:[2,40]},{5:[2,41]},t(S,[2,22]),{5:[1,157]},{5:[2,87]},{5:[2,88]},{5:[1,158]},{5:[2,89]},{5:[2,90]},t(S,[2,43]),{5:Se,28:159,31:ce,34:ae,36:Oe,38:ge,40:ze},{5:Se,28:160,31:ce,34:ae,36:Oe,38:ge,40:ze},{5:Se,28:161,31:ce,34:ae,36:Oe,38:ge,40:ze},{5:Se,28:162,31:ce,34:ae,36:Oe,38:ge,40:ze},{5:He,40:$e,56:163,57:Re,59:Ie},{5:He,40:$e,56:164,57:Re,59:Ie},t(S,[2,23]),t(S,[2,24]),t(S,[2,25]),t(S,[2,26]),t(S,[2,44]),t(S,[2,45])],defaultActions:{8:[2,2],12:[2,1],41:[2,3],42:[2,8],43:[2,9],44:[2,10],45:[2,11],46:[2,12],47:[2,13],48:[2,14],49:[2,15],50:[2,16],134:[2,83],135:[2,84],137:[2,35],138:[2,36],139:[2,37],141:[2,38],142:[2,39],143:[2,40],144:[2,41],147:[2,87],148:[2,88],150:[2,89],151:[2,90]},parseError:o(function(oe,V){if(V.recoverable)this.trace(oe);else{var xe=new Error(oe);throw xe.hash=V,xe}},"parseError"),parse:o(function(oe){var V=this,xe=[0],q=[],pe=[null],ve=[],Pe=this.table,_e="",we=0,Ve=0,De=0,qe=2,at=1,Rt=ve.slice.call(arguments,1),st=Object.create(this.lexer),Ue={yy:{}};for(var ct in this.yy)Object.prototype.hasOwnProperty.call(this.yy,ct)&&(Ue.yy[ct]=this.yy[ct]);st.setInput(oe,Ue.yy),Ue.yy.lexer=st,Ue.yy.parser=this,typeof st.yylloc>"u"&&(st.yylloc={});var We=st.yylloc;ve.push(We);var ot=st.options&&st.options.ranges;typeof Ue.yy.parseError=="function"?this.parseError=Ue.yy.parseError:this.parseError=Object.getPrototypeOf(this).parseError;function Yt(Dr){xe.length=xe.length-2*Dr,pe.length=pe.length-Dr,ve.length=ve.length-Dr}o(Yt,"popStack");function bt(){var Dr;return Dr=q.pop()||st.lex()||at,typeof Dr!="number"&&(Dr instanceof Array&&(q=Dr,Dr=q.pop()),Dr=V.symbols_[Dr]||Dr),Dr}o(bt,"lex");for(var Mt,xt,ut,Et,ft,yt,nt={},dn,Tt,On,tn;;){if(ut=xe[xe.length-1],this.defaultActions[ut]?Et=this.defaultActions[ut]:((Mt===null||typeof Mt>"u")&&(Mt=bt()),Et=Pe[ut]&&Pe[ut][Mt]),typeof Et>"u"||!Et.length||!Et[0]){var _r="";tn=[];for(dn in Pe[ut])this.terminals_[dn]&&dn>qe&&tn.push("'"+this.terminals_[dn]+"'");st.showPosition?_r="Parse error on line "+(we+1)+`: +`+st.showPosition()+` +Expecting `+tn.join(", ")+", got '"+(this.terminals_[Mt]||Mt)+"'":_r="Parse error on line "+(we+1)+": Unexpected "+(Mt==at?"end of input":"'"+(this.terminals_[Mt]||Mt)+"'"),this.parseError(_r,{text:st.match,token:this.terminals_[Mt]||Mt,line:st.yylineno,loc:We,expected:tn})}if(Et[0]instanceof Array&&Et.length>1)throw new Error("Parse Error: multiple actions possible at state: "+ut+", token: "+Mt);switch(Et[0]){case 1:xe.push(Mt),pe.push(st.yytext),ve.push(st.yylloc),xe.push(Et[1]),Mt=null,xt?(Mt=xt,xt=null):(Ve=st.yyleng,_e=st.yytext,we=st.yylineno,We=st.yylloc,De>0&&De--);break;case 2:if(Tt=this.productions_[Et[1]][1],nt.$=pe[pe.length-Tt],nt._$={first_line:ve[ve.length-(Tt||1)].first_line,last_line:ve[ve.length-1].last_line,first_column:ve[ve.length-(Tt||1)].first_column,last_column:ve[ve.length-1].last_column},ot&&(nt._$.range=[ve[ve.length-(Tt||1)].range[0],ve[ve.length-1].range[1]]),yt=this.performAction.apply(nt,[_e,Ve,we,Ue.yy,Et[1],pe,ve].concat(Rt)),typeof yt<"u")return yt;Tt&&(xe=xe.slice(0,-1*Tt*2),pe=pe.slice(0,-1*Tt),ve=ve.slice(0,-1*Tt)),xe.push(this.productions_[Et[1]][0]),pe.push(nt.$),ve.push(nt._$),On=Pe[xe[xe.length-2]][xe[xe.length-1]],xe.push(On);break;case 3:return!0}}return!0},"parse")},W=function(){var re={EOF:1,parseError:o(function(V,xe){if(this.yy.parser)this.yy.parser.parseError(V,xe);else throw new Error(V)},"parseError"),setInput:o(function(oe,V){return this.yy=V||this.yy||{},this._input=oe,this._more=this._backtrack=this.done=!1,this.yylineno=this.yyleng=0,this.yytext=this.matched=this.match="",this.conditionStack=["INITIAL"],this.yylloc={first_line:1,first_column:0,last_line:1,last_column:0},this.options.ranges&&(this.yylloc.range=[0,0]),this.offset=0,this},"setInput"),input:o(function(){var oe=this._input[0];this.yytext+=oe,this.yyleng++,this.offset++,this.match+=oe,this.matched+=oe;var V=oe.match(/(?:\r\n?|\n).*/g);return V?(this.yylineno++,this.yylloc.last_line++):this.yylloc.last_column++,this.options.ranges&&this.yylloc.range[1]++,this._input=this._input.slice(1),oe},"input"),unput:o(function(oe){var V=oe.length,xe=oe.split(/(?:\r\n?|\n)/g);this._input=oe+this._input,this.yytext=this.yytext.substr(0,this.yytext.length-V),this.offset-=V;var q=this.match.split(/(?:\r\n?|\n)/g);this.match=this.match.substr(0,this.match.length-1),this.matched=this.matched.substr(0,this.matched.length-1),xe.length-1&&(this.yylineno-=xe.length-1);var pe=this.yylloc.range;return this.yylloc={first_line:this.yylloc.first_line,last_line:this.yylineno+1,first_column:this.yylloc.first_column,last_column:xe?(xe.length===q.length?this.yylloc.first_column:0)+q[q.length-xe.length].length-xe[0].length:this.yylloc.first_column-V},this.options.ranges&&(this.yylloc.range=[pe[0],pe[0]+this.yyleng-V]),this.yyleng=this.yytext.length,this},"unput"),more:o(function(){return this._more=!0,this},"more"),reject:o(function(){if(this.options.backtrack_lexer)this._backtrack=!0;else return this.parseError("Lexical error on line "+(this.yylineno+1)+`. You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true). +`+this.showPosition(),{text:"",token:null,line:this.yylineno});return this},"reject"),less:o(function(oe){this.unput(this.match.slice(oe))},"less"),pastInput:o(function(){var oe=this.matched.substr(0,this.matched.length-this.match.length);return(oe.length>20?"...":"")+oe.substr(-20).replace(/\n/g,"")},"pastInput"),upcomingInput:o(function(){var oe=this.match;return oe.length<20&&(oe+=this._input.substr(0,20-oe.length)),(oe.substr(0,20)+(oe.length>20?"...":"")).replace(/\n/g,"")},"upcomingInput"),showPosition:o(function(){var oe=this.pastInput(),V=new Array(oe.length+1).join("-");return oe+this.upcomingInput()+` +`+V+"^"},"showPosition"),test_match:o(function(oe,V){var xe,q,pe;if(this.options.backtrack_lexer&&(pe={yylineno:this.yylineno,yylloc:{first_line:this.yylloc.first_line,last_line:this.last_line,first_column:this.yylloc.first_column,last_column:this.yylloc.last_column},yytext:this.yytext,match:this.match,matches:this.matches,matched:this.matched,yyleng:this.yyleng,offset:this.offset,_more:this._more,_input:this._input,yy:this.yy,conditionStack:this.conditionStack.slice(0),done:this.done},this.options.ranges&&(pe.yylloc.range=this.yylloc.range.slice(0))),q=oe[0].match(/(?:\r\n?|\n).*/g),q&&(this.yylineno+=q.length),this.yylloc={first_line:this.yylloc.last_line,last_line:this.yylineno+1,first_column:this.yylloc.last_column,last_column:q?q[q.length-1].length-q[q.length-1].match(/\r?\n?/)[0].length:this.yylloc.last_column+oe[0].length},this.yytext+=oe[0],this.match+=oe[0],this.matches=oe,this.yyleng=this.yytext.length,this.options.ranges&&(this.yylloc.range=[this.offset,this.offset+=this.yyleng]),this._more=!1,this._backtrack=!1,this._input=this._input.slice(oe[0].length),this.matched+=oe[0],xe=this.performAction.call(this,this.yy,this,V,this.conditionStack[this.conditionStack.length-1]),this.done&&this._input&&(this.done=!1),xe)return xe;if(this._backtrack){for(var ve in pe)this[ve]=pe[ve];return!1}return!1},"test_match"),next:o(function(){if(this.done)return this.EOF;this._input||(this.done=!0);var oe,V,xe,q;this._more||(this.yytext="",this.match="");for(var pe=this._currentRules(),ve=0;veV[0].length)){if(V=xe,q=ve,this.options.backtrack_lexer){if(oe=this.test_match(xe,pe[ve]),oe!==!1)return oe;if(this._backtrack){V=!1;continue}else return!1}else if(!this.options.flex)break}return V?(oe=this.test_match(V,pe[q]),oe!==!1?oe:!1):this._input===""?this.EOF:this.parseError("Lexical error on line "+(this.yylineno+1)+`. Unrecognized text. +`+this.showPosition(),{text:"",token:null,line:this.yylineno})},"next"),lex:o(function(){var V=this.next();return V||this.lex()},"lex"),begin:o(function(V){this.conditionStack.push(V)},"begin"),popState:o(function(){var V=this.conditionStack.length-1;return V>0?this.conditionStack.pop():this.conditionStack[0]},"popState"),_currentRules:o(function(){return this.conditionStack.length&&this.conditionStack[this.conditionStack.length-1]?this.conditions[this.conditionStack[this.conditionStack.length-1]].rules:this.conditions.INITIAL.rules},"_currentRules"),topState:o(function(V){return V=this.conditionStack.length-1-Math.abs(V||0),V>=0?this.conditionStack[V]:"INITIAL"},"topState"),pushState:o(function(V){this.begin(V)},"pushState"),stateStackSize:o(function(){return this.conditionStack.length},"stateStackSize"),options:{"case-insensitive":!0},performAction:o(function(V,xe,q,pe){var ve=pe;switch(q){case 0:return"title";case 1:return this.begin("acc_title"),9;break;case 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49:return this.begin("style"),77;break;case 50:return 75;case 51:return 81;case 52:return 88;case 53:return"PERCENT";case 54:return 86;case 55:return 84;case 56:break;case 57:this.begin("string");break;case 58:this.popState();break;case 59:return this.begin("style"),72;break;case 60:return this.begin("style"),74;break;case 61:return 61;case 62:return 64;case 63:return 63;case 64:this.begin("string");break;case 65:this.popState();break;case 66:return"qString";case 67:return xe.yytext=xe.yytext.trim(),89;break;case 68:return 75;case 69:return 80;case 70:return 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40:Z[ce-1].unshift({type:"criticalStart",criticalText:se.parseMessage(Z[ce-2]),signalType:se.LINETYPE.CRITICAL_START}),Z[ce-1].push({type:"criticalEnd",signalType:se.LINETYPE.CRITICAL_END}),this.$=Z[ce-1];break;case 41:Z[ce-1].unshift({type:"breakStart",breakText:se.parseMessage(Z[ce-2]),signalType:se.LINETYPE.BREAK_START}),Z[ce-1].push({type:"breakEnd",optText:se.parseMessage(Z[ce-2]),signalType:se.LINETYPE.BREAK_END}),this.$=Z[ce-1];break;case 43:this.$=Z[ce-3].concat([{type:"option",optionText:se.parseMessage(Z[ce-1]),signalType:se.LINETYPE.CRITICAL_OPTION},Z[ce]]);break;case 45:this.$=Z[ce-3].concat([{type:"and",parText:se.parseMessage(Z[ce-1]),signalType:se.LINETYPE.PAR_AND},Z[ce]]);break;case 47:this.$=Z[ce-3].concat([{type:"else",altText:se.parseMessage(Z[ce-1]),signalType:se.LINETYPE.ALT_ELSE},Z[ce]]);break;case 48:Z[ce-3].draw="participant",Z[ce-3].type="addParticipant",Z[ce-3].description=se.parseMessage(Z[ce-1]),this.$=Z[ce-3];break;case 49:Z[ce-1].draw="participant",Z[ce-1].type="addParticipant",this.$=Z[ce-1];break;case 50:Z[ce-3].draw="actor",Z[ce-3].type="addParticipant",Z[ce-3].description=se.parseMessage(Z[ce-1]),this.$=Z[ce-3];break;case 51:Z[ce-1].draw="actor",Z[ce-1].type="addParticipant",this.$=Z[ce-1];break;case 52:Z[ce-1].type="destroyParticipant",this.$=Z[ce-1];break;case 53:this.$=[Z[ce-1],{type:"addNote",placement:Z[ce-2],actor:Z[ce-1].actor,text:Z[ce]}];break;case 54:Z[ce-2]=[].concat(Z[ce-1],Z[ce-1]).slice(0,2),Z[ce-2][0]=Z[ce-2][0].actor,Z[ce-2][1]=Z[ce-2][1].actor,this.$=[Z[ce-1],{type:"addNote",placement:se.PLACEMENT.OVER,actor:Z[ce-2].slice(0,2),text:Z[ce]}];break;case 55:this.$=[Z[ce-1],{type:"addLinks",actor:Z[ce-1].actor,text:Z[ce]}];break;case 56:this.$=[Z[ce-1],{type:"addALink",actor:Z[ce-1].actor,text:Z[ce]}];break;case 57:this.$=[Z[ce-1],{type:"addProperties",actor:Z[ce-1].actor,text:Z[ce]}];break;case 58:this.$=[Z[ce-1],{type:"addDetails",actor:Z[ce-1].actor,text:Z[ce]}];break;case 61:this.$=[Z[ce-2],Z[ce]];break;case 62:this.$=Z[ce];break;case 63:this.$=se.PLACEMENT.LEFTOF;break;case 64:this.$=se.PLACEMENT.RIGHTOF;break;case 65:this.$=[Z[ce-4],Z[ce-1],{type:"addMessage",from:Z[ce-4].actor,to:Z[ce-1].actor,signalType:Z[ce-3],msg:Z[ce],activate:!0},{type:"activeStart",signalType:se.LINETYPE.ACTIVE_START,actor:Z[ce-1].actor}];break;case 66:this.$=[Z[ce-4],Z[ce-1],{type:"addMessage",from:Z[ce-4].actor,to:Z[ce-1].actor,signalType:Z[ce-3],msg:Z[ce]},{type:"activeEnd",signalType:se.LINETYPE.ACTIVE_END,actor:Z[ce-4].actor}];break;case 67:this.$=[Z[ce-3],Z[ce-1],{type:"addMessage",from:Z[ce-3].actor,to:Z[ce-1].actor,signalType:Z[ce-2],msg:Z[ce]}];break;case 68:this.$={type:"addParticipant",actor:Z[ce]};break;case 69:this.$=se.LINETYPE.SOLID_OPEN;break;case 70:this.$=se.LINETYPE.DOTTED_OPEN;break;case 71:this.$=se.LINETYPE.SOLID;break;case 72:this.$=se.LINETYPE.BIDIRECTIONAL_SOLID;break;case 73:this.$=se.LINETYPE.DOTTED;break;case 74:this.$=se.LINETYPE.BIDIRECTIONAL_DOTTED;break;case 75:this.$=se.LINETYPE.SOLID_CROSS;break;case 76:this.$=se.LINETYPE.DOTTED_CROSS;break;case 77:this.$=se.LINETYPE.SOLID_POINT;break;case 78:this.$=se.LINETYPE.DOTTED_POINT;break;case 79:this.$=se.parseMessage(Z[ce].trim().substring(1));break}},"anonymous"),table:[{3:1,4:e,5:r,6:n},{1:[3]},{3:5,4:e,5:r,6:n},{3:6,4:e,5:r,6:n},t([1,4,5,13,14,18,21,23,29,30,31,33,35,36,37,38,39,41,43,44,46,50,52,53,54,59,60,61,62,70],i,{7:7}),{1:[2,1]},{1:[2,2]},{1:[2,3],4:a,5:s,8:8,9:10,12:12,13:l,14:u,17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},t(F,[2,5]),{9:47,12:12,13:l,14:u,17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},t(F,[2,7]),t(F,[2,8]),t(F,[2,14]),{12:48,50:_,52:I,53:D},{15:[1,49]},{5:[1,50]},{5:[1,53],19:[1,51],20:[1,52]},{22:54,70:B},{22:55,70:B},{5:[1,56]},{5:[1,57]},{5:[1,58]},{5:[1,59]},{5:[1,60]},t(F,[2,29]),t(F,[2,30]),{32:[1,61]},{34:[1,62]},t(F,[2,33]),{15:[1,63]},{15:[1,64]},{15:[1,65]},{15:[1,66]},{15:[1,67]},{15:[1,68]},{15:[1,69]},{15:[1,70]},{22:71,70:B},{22:72,70:B},{22:73,70:B},{67:74,71:[1,75],72:[1,76],73:[1,77],74:[1,78],75:[1,79],76:[1,80],77:[1,81],78:[1,82],79:[1,83],80:[1,84]},{55:85,57:[1,86],65:[1,87],66:[1,88]},{22:89,70:B},{22:90,70:B},{22:91,70:B},{22:92,70:B},t([5,51,64,71,72,73,74,75,76,77,78,79,80,81],[2,68]),t(F,[2,6]),t(F,[2,15]),t(P,[2,9],{10:93}),t(F,[2,17]),{5:[1,95],19:[1,94]},{5:[1,96]},t(F,[2,21]),{5:[1,97]},{5:[1,98]},t(F,[2,24]),t(F,[2,25]),t(F,[2,26]),t(F,[2,27]),t(F,[2,28]),t(F,[2,31]),t(F,[2,32]),t(z,i,{7:99}),t(z,i,{7:100}),t(z,i,{7:101}),t($,i,{40:102,7:103}),t(H,i,{42:104,7:105}),t(H,i,{7:105,42:106}),t(Q,i,{45:107,7:108}),t(z,i,{7:109}),{5:[1,111],51:[1,110]},{5:[1,113],51:[1,112]},{5:[1,114]},{22:117,68:[1,115],69:[1,116],70:B},t(j,[2,69]),t(j,[2,70]),t(j,[2,71]),t(j,[2,72]),t(j,[2,73]),t(j,[2,74]),t(j,[2,75]),t(j,[2,76]),t(j,[2,77]),t(j,[2,78]),{22:118,70:B},{22:120,58:119,70:B},{70:[2,63]},{70:[2,64]},{56:121,81:ie},{56:123,81:ie},{56:124,81:ie},{56:125,81:ie},{4:[1,128],5:[1,130],11:127,12:129,16:[1,126],50:_,52:I,53:D},{5:[1,131]},t(F,[2,19]),t(F,[2,20]),t(F,[2,22]),t(F,[2,23]),{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[1,132],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[1,133],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[1,134],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{16:[1,135]},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[2,46],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,49:[1,136],50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{16:[1,137]},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[2,44],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,48:[1,138],50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{16:[1,139]},{16:[1,140]},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[2,42],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,47:[1,141],50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{4:a,5:s,8:8,9:10,12:12,13:l,14:u,16:[1,142],17:15,18:h,21:f,22:40,23:d,24:19,25:20,26:21,27:22,28:23,29:p,30:m,31:g,33:y,35:v,36:x,37:b,38:w,39:C,41:T,43:E,44:A,46:S,50:_,52:I,53:D,54:k,59:L,60:R,61:O,62:M,70:B},{15:[1,143]},t(F,[2,49]),{15:[1,144]},t(F,[2,51]),t(F,[2,52]),{22:145,70:B},{22:146,70:B},{56:147,81:ie},{56:148,81:ie},{56:149,81:ie},{64:[1,150],81:[2,62]},{5:[2,55]},{5:[2,79]},{5:[2,56]},{5:[2,57]},{5:[2,58]},t(F,[2,16]),t(P,[2,10]),{12:151,50:_,52:I,53:D},t(P,[2,12]),t(P,[2,13]),t(F,[2,18]),t(F,[2,34]),t(F,[2,35]),t(F,[2,36]),t(F,[2,37]),{15:[1,152]},t(F,[2,38]),{15:[1,153]},t(F,[2,39]),t(F,[2,40]),{15:[1,154]},t(F,[2,41]),{5:[1,155]},{5:[1,156]},{56:157,81:ie},{56:158,81:ie},{5:[2,67]},{5:[2,53]},{5:[2,54]},{22:159,70:B},t(P,[2,11]),t($,i,{7:103,40:160}),t(H,i,{7:105,42:161}),t(Q,i,{7:108,45:162}),t(F,[2,48]),t(F,[2,50]),{5:[2,65]},{5:[2,66]},{81:[2,61]},{16:[2,47]},{16:[2,45]},{16:[2,43]}],defaultActions:{5:[2,1],6:[2,2],87:[2,63],88:[2,64],121:[2,55],122:[2,79],123:[2,56],124:[2,57],125:[2,58],147:[2,67],148:[2,53],149:[2,54],157:[2,65],158:[2,66],159:[2,61],160:[2,47],161:[2,45],162:[2,43]},parseError:o(function(X,te){if(te.recoverable)this.trace(X);else{var J=new Error(X);throw J.hash=te,J}},"parseError"),parse:o(function(X){var te=this,J=[0],se=[],ue=[null],Z=[],Se=this.table,ce="",ae=0,Oe=0,ge=0,ze=2,He=1,$e=Z.slice.call(arguments,1),Re=Object.create(this.lexer),Ie={yy:{}};for(var be in this.yy)Object.prototype.hasOwnProperty.call(this.yy,be)&&(Ie.yy[be]=this.yy[be]);Re.setInput(X,Ie.yy),Ie.yy.lexer=Re,Ie.yy.parser=this,typeof Re.yylloc>"u"&&(Re.yylloc={});var W=Re.yylloc;Z.push(W);var de=Re.options&&Re.options.ranges;typeof Ie.yy.parseError=="function"?this.parseError=Ie.yy.parseError:this.parseError=Object.getPrototypeOf(this).parseError;function re(Rt){J.length=J.length-2*Rt,ue.length=ue.length-Rt,Z.length=Z.length-Rt}o(re,"popStack");function oe(){var Rt;return Rt=se.pop()||Re.lex()||He,typeof Rt!="number"&&(Rt instanceof Array&&(se=Rt,Rt=se.pop()),Rt=te.symbols_[Rt]||Rt),Rt}o(oe,"lex");for(var V,xe,q,pe,ve,Pe,_e={},we,Ve,De,qe;;){if(q=J[J.length-1],this.defaultActions[q]?pe=this.defaultActions[q]:((V===null||typeof V>"u")&&(V=oe()),pe=Se[q]&&Se[q][V]),typeof pe>"u"||!pe.length||!pe[0]){var at="";qe=[];for(we in Se[q])this.terminals_[we]&&we>ze&&qe.push("'"+this.terminals_[we]+"'");Re.showPosition?at="Parse error on line "+(ae+1)+`: +`+Re.showPosition()+` +Expecting `+qe.join(", ")+", got '"+(this.terminals_[V]||V)+"'":at="Parse error on line "+(ae+1)+": Unexpected "+(V==He?"end of input":"'"+(this.terminals_[V]||V)+"'"),this.parseError(at,{text:Re.match,token:this.terminals_[V]||V,line:Re.yylineno,loc:W,expected:qe})}if(pe[0]instanceof Array&&pe.length>1)throw new Error("Parse Error: multiple actions possible at state: "+q+", token: "+V);switch(pe[0]){case 1:J.push(V),ue.push(Re.yytext),Z.push(Re.yylloc),J.push(pe[1]),V=null,xe?(V=xe,xe=null):(Oe=Re.yyleng,ce=Re.yytext,ae=Re.yylineno,W=Re.yylloc,ge>0&&ge--);break;case 2:if(Ve=this.productions_[pe[1]][1],_e.$=ue[ue.length-Ve],_e._$={first_line:Z[Z.length-(Ve||1)].first_line,last_line:Z[Z.length-1].last_line,first_column:Z[Z.length-(Ve||1)].first_column,last_column:Z[Z.length-1].last_column},de&&(_e._$.range=[Z[Z.length-(Ve||1)].range[0],Z[Z.length-1].range[1]]),Pe=this.performAction.apply(_e,[ce,Oe,ae,Ie.yy,pe[1],ue,Z].concat($e)),typeof Pe<"u")return Pe;Ve&&(J=J.slice(0,-1*Ve*2),ue=ue.slice(0,-1*Ve),Z=Z.slice(0,-1*Ve)),J.push(this.productions_[pe[1]][0]),ue.push(_e.$),Z.push(_e._$),De=Se[J[J.length-2]][J[J.length-1]],J.push(De);break;case 3:return!0}}return!0},"parse")},le=function(){var K={EOF:1,parseError:o(function(te,J){if(this.yy.parser)this.yy.parser.parseError(te,J);else throw new Error(te)},"parseError"),setInput:o(function(X,te){return this.yy=te||this.yy||{},this._input=X,this._more=this._backtrack=this.done=!1,this.yylineno=this.yyleng=0,this.yytext=this.matched=this.match="",this.conditionStack=["INITIAL"],this.yylloc={first_line:1,first_column:0,last_line:1,last_column:0},this.options.ranges&&(this.yylloc.range=[0,0]),this.offset=0,this},"setInput"),input:o(function(){var X=this._input[0];this.yytext+=X,this.yyleng++,this.offset++,this.match+=X,this.matched+=X;var te=X.match(/(?:\r\n?|\n).*/g);return te?(this.yylineno++,this.yylloc.last_line++):this.yylloc.last_column++,this.options.ranges&&this.yylloc.range[1]++,this._input=this._input.slice(1),X},"input"),unput:o(function(X){var te=X.length,J=X.split(/(?:\r\n?|\n)/g);this._input=X+this._input,this.yytext=this.yytext.substr(0,this.yytext.length-te),this.offset-=te;var se=this.match.split(/(?:\r\n?|\n)/g);this.match=this.match.substr(0,this.match.length-1),this.matched=this.matched.substr(0,this.matched.length-1),J.length-1&&(this.yylineno-=J.length-1);var ue=this.yylloc.range;return this.yylloc={first_line:this.yylloc.first_line,last_line:this.yylineno+1,first_column:this.yylloc.first_column,last_column:J?(J.length===se.length?this.yylloc.first_column:0)+se[se.length-J.length].length-J[0].length:this.yylloc.first_column-te},this.options.ranges&&(this.yylloc.range=[ue[0],ue[0]+this.yyleng-te]),this.yyleng=this.yytext.length,this},"unput"),more:o(function(){return this._more=!0,this},"more"),reject:o(function(){if(this.options.backtrack_lexer)this._backtrack=!0;else return this.parseError("Lexical error on line "+(this.yylineno+1)+`. You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true). +`+this.showPosition(),{text:"",token:null,line:this.yylineno});return this},"reject"),less:o(function(X){this.unput(this.match.slice(X))},"less"),pastInput:o(function(){var X=this.matched.substr(0,this.matched.length-this.match.length);return(X.length>20?"...":"")+X.substr(-20).replace(/\n/g,"")},"pastInput"),upcomingInput:o(function(){var X=this.match;return X.length<20&&(X+=this._input.substr(0,20-X.length)),(X.substr(0,20)+(X.length>20?"...":"")).replace(/\n/g,"")},"upcomingInput"),showPosition:o(function(){var X=this.pastInput(),te=new Array(X.length+1).join("-");return X+this.upcomingInput()+` +`+te+"^"},"showPosition"),test_match:o(function(X,te){var J,se,ue;if(this.options.backtrack_lexer&&(ue={yylineno:this.yylineno,yylloc:{first_line:this.yylloc.first_line,last_line:this.last_line,first_column:this.yylloc.first_column,last_column:this.yylloc.last_column},yytext:this.yytext,match:this.match,matches:this.matches,matched:this.matched,yyleng:this.yyleng,offset:this.offset,_more:this._more,_input:this._input,yy:this.yy,conditionStack:this.conditionStack.slice(0),done:this.done},this.options.ranges&&(ue.yylloc.range=this.yylloc.range.slice(0))),se=X[0].match(/(?:\r\n?|\n).*/g),se&&(this.yylineno+=se.length),this.yylloc={first_line:this.yylloc.last_line,last_line:this.yylineno+1,first_column:this.yylloc.last_column,last_column:se?se[se.length-1].length-se[se.length-1].match(/\r?\n?/)[0].length:this.yylloc.last_column+X[0].length},this.yytext+=X[0],this.match+=X[0],this.matches=X,this.yyleng=this.yytext.length,this.options.ranges&&(this.yylloc.range=[this.offset,this.offset+=this.yyleng]),this._more=!1,this._backtrack=!1,this._input=this._input.slice(X[0].length),this.matched+=X[0],J=this.performAction.call(this,this.yy,this,te,this.conditionStack[this.conditionStack.length-1]),this.done&&this._input&&(this.done=!1),J)return J;if(this._backtrack){for(var Z in ue)this[Z]=ue[Z];return!1}return!1},"test_match"),next:o(function(){if(this.done)return this.EOF;this._input||(this.done=!0);var X,te,J,se;this._more||(this.yytext="",this.match="");for(var ue=this._currentRules(),Z=0;Zte[0].length)){if(te=J,se=Z,this.options.backtrack_lexer){if(X=this.test_match(J,ue[Z]),X!==!1)return X;if(this._backtrack){te=!1;continue}else return!1}else if(!this.options.flex)break}return te?(X=this.test_match(te,ue[se]),X!==!1?X:!1):this._input===""?this.EOF:this.parseError("Lexical error on line "+(this.yylineno+1)+`. Unrecognized text. +`+this.showPosition(),{text:"",token:null,line:this.yylineno})},"next"),lex:o(function(){var te=this.next();return te||this.lex()},"lex"),begin:o(function(te){this.conditionStack.push(te)},"begin"),popState:o(function(){var te=this.conditionStack.length-1;return te>0?this.conditionStack.pop():this.conditionStack[0]},"popState"),_currentRules:o(function(){return this.conditionStack.length&&this.conditionStack[this.conditionStack.length-1]?this.conditions[this.conditionStack[this.conditionStack.length-1]].rules:this.conditions.INITIAL.rules},"_currentRules"),topState:o(function(te){return te=this.conditionStack.length-1-Math.abs(te||0),te>=0?this.conditionStack[te]:"INITIAL"},"topState"),pushState:o(function(te){this.begin(te)},"pushState"),stateStackSize:o(function(){return this.conditionStack.length},"stateStackSize"),options:{"case-insensitive":!0},performAction:o(function(te,J,se,ue){var Z=ue;switch(se){case 0:return 5;case 1:break;case 2:break;case 3:break;case 4:break;case 5:break;case 6:return 19;case 7:return this.begin("LINE"),14;break;case 8:return this.begin("ID"),50;break;case 9:return this.begin("ID"),52;break;case 10:return 13;case 11:return this.begin("ID"),53;break;case 12:return J.yytext=J.yytext.trim(),this.begin("ALIAS"),70;break;case 13:return this.popState(),this.popState(),this.begin("LINE"),51;break;case 14:return this.popState(),this.popState(),5;break;case 15:return this.begin("LINE"),36;break;case 16:return this.begin("LINE"),37;break;case 17:return this.begin("LINE"),38;break;case 18:return this.begin("LINE"),39;break;case 19:return this.begin("LINE"),49;break;case 20:return this.begin("LINE"),41;break;case 21:return this.begin("LINE"),43;break;case 22:return this.begin("LINE"),48;break;case 23:return this.begin("LINE"),44;break;case 24:return this.begin("LINE"),47;break;case 25:return this.begin("LINE"),46;break;case 26:return this.popState(),15;break;case 27:return 16;case 28:return 65;case 29:return 66;case 30:return 59;case 31:return 60;case 32:return 61;case 33:return 62;case 34:return 57;case 35:return 54;case 36:return this.begin("ID"),21;break;case 37:return this.begin("ID"),23;break;case 38:return 29;case 39:return 30;case 40:return this.begin("acc_title"),31;break;case 41:return this.popState(),"acc_title_value";break;case 42:return this.begin("acc_descr"),33;break;case 43:return this.popState(),"acc_descr_value";break;case 44:this.begin("acc_descr_multiline");break;case 45:this.popState();break;case 46:return"acc_descr_multiline_value";case 47:return 6;case 48:return 18;case 49:return 20;case 50:return 64;case 51:return 5;case 52:return J.yytext=J.yytext.trim(),70;break;case 53:return 73;case 54:return 74;case 55:return 75;case 56:return 76;case 57:return 71;case 58:return 72;case 59:return 77;case 60:return 78;case 61:return 79;case 62:return 80;case 63:return 81;case 64:return 68;case 65:return 69;case 66:return 5;case 67:return"INVALID"}},"anonymous"),rules:[/^(?:[\n]+)/i,/^(?:\s+)/i,/^(?:((?!\n)\s)+)/i,/^(?:#[^\n]*)/i,/^(?:%(?!\{)[^\n]*)/i,/^(?:[^\}]%%[^\n]*)/i,/^(?:[0-9]+(?=[ \n]+))/i,/^(?:box\b)/i,/^(?:participant\b)/i,/^(?:actor\b)/i,/^(?:create\b)/i,/^(?:destroy\b)/i,/^(?:[^\<->\->:\n,;]+?([\-]*[^\<->\->:\n,;]+?)*?(?=((?!\n)\s)+as(?!\n)\s|[#\n;]|$))/i,/^(?:as\b)/i,/^(?:(?:))/i,/^(?:loop\b)/i,/^(?:rect\b)/i,/^(?:opt\b)/i,/^(?:alt\b)/i,/^(?:else\b)/i,/^(?:par\b)/i,/^(?:par_over\b)/i,/^(?:and\b)/i,/^(?:critical\b)/i,/^(?:option\b)/i,/^(?:break\b)/i,/^(?:(?:[:]?(?:no)?wrap)?[^#\n;]*)/i,/^(?:end\b)/i,/^(?:left of\b)/i,/^(?:right of\b)/i,/^(?:links\b)/i,/^(?:link\b)/i,/^(?:properties\b)/i,/^(?:details\b)/i,/^(?:over\b)/i,/^(?:note\b)/i,/^(?:activate\b)/i,/^(?:deactivate\b)/i,/^(?:title\s[^#\n;]+)/i,/^(?:title:\s[^#\n;]+)/i,/^(?:accTitle\s*:\s*)/i,/^(?:(?!\n||)*[^\n]*)/i,/^(?:accDescr\s*:\s*)/i,/^(?:(?!\n||)*[^\n]*)/i,/^(?:accDescr\s*\{\s*)/i,/^(?:[\}])/i,/^(?:[^\}]*)/i,/^(?:sequenceDiagram\b)/i,/^(?:autonumber\b)/i,/^(?:off\b)/i,/^(?:,)/i,/^(?:;)/i,/^(?:[^\+\<->\->:\n,;]+((?!(-x|--x|-\)|--\)))[\-]*[^\+\<->\->:\n,;]+)*)/i,/^(?:->>)/i,/^(?:<<->>)/i,/^(?:-->>)/i,/^(?:<<-->>)/i,/^(?:->)/i,/^(?:-->)/i,/^(?:-[x])/i,/^(?:--[x])/i,/^(?:-[\)])/i,/^(?:--[\)])/i,/^(?::(?:(?:no)?wrap)?[^#\n;]+)/i,/^(?:\+)/i,/^(?:-)/i,/^(?:$)/i,/^(?:.)/i],conditions:{acc_descr_multiline:{rules:[45,46],inclusive:!1},acc_descr:{rules:[43],inclusive:!1},acc_title:{rules:[41],inclusive:!1},ID:{rules:[2,3,12],inclusive:!1},ALIAS:{rules:[2,3,13,14],inclusive:!1},LINE:{rules:[2,3,26],inclusive:!1},INITIAL:{rules:[0,1,3,4,5,6,7,8,9,10,11,15,16,17,18,19,20,21,22,23,24,25,27,28,29,30,31,32,33,34,35,36,37,38,39,40,42,44,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67],inclusive:!0}}};return K}();ne.lexer=le;function he(){this.yy={}}return o(he,"Parser"),he.prototype=ne,ne.Parser=he,new he}();CO.parser=CO;lfe=CO});var iVe,aVe,sVe,_6,ufe=N(()=>{"use strict";zt();vt();s6();gr();mi();iVe={SOLID:0,DOTTED:1,NOTE:2,SOLID_CROSS:3,DOTTED_CROSS:4,SOLID_OPEN:5,DOTTED_OPEN:6,LOOP_START:10,LOOP_END:11,ALT_START:12,ALT_ELSE:13,ALT_END:14,OPT_START:15,OPT_END:16,ACTIVE_START:17,ACTIVE_END:18,PAR_START:19,PAR_AND:20,PAR_END:21,RECT_START:22,RECT_END:23,SOLID_POINT:24,DOTTED_POINT:25,AUTONUMBER:26,CRITICAL_START:27,CRITICAL_OPTION:28,CRITICAL_END:29,BREAK_START:30,BREAK_END:31,PAR_OVER_START:32,BIDIRECTIONAL_SOLID:33,BIDIRECTIONAL_DOTTED:34},aVe={FILLED:0,OPEN:1},sVe={LEFTOF:0,RIGHTOF:1,OVER:2},_6=class{constructor(){this.state=new pf(()=>({prevActor:void 0,actors:new Map,createdActors:new Map,destroyedActors:new Map,boxes:[],messages:[],notes:[],sequenceNumbersEnabled:!1,wrapEnabled:void 0,currentBox:void 0,lastCreated:void 0,lastDestroyed:void 0}));this.setAccTitle=Lr;this.setAccDescription=Nr;this.setDiagramTitle=$r;this.getAccTitle=Rr;this.getAccDescription=Mr;this.getDiagramTitle=Ir;this.apply=this.apply.bind(this),this.parseBoxData=this.parseBoxData.bind(this),this.parseMessage=this.parseMessage.bind(this),this.clear(),this.setWrap(me().wrap),this.LINETYPE=iVe,this.ARROWTYPE=aVe,this.PLACEMENT=sVe}static{o(this,"SequenceDB")}addBox(e){this.state.records.boxes.push({name:e.text,wrap:e.wrap??this.autoWrap(),fill:e.color,actorKeys:[]}),this.state.records.currentBox=this.state.records.boxes.slice(-1)[0]}addActor(e,r,n,i){let a=this.state.records.currentBox,s=this.state.records.actors.get(e);if(s){if(this.state.records.currentBox&&s.box&&this.state.records.currentBox!==s.box)throw new Error(`A same participant should only be defined in one Box: ${s.name} can't be in '${s.box.name}' and in '${this.state.records.currentBox.name}' at the same time.`);if(a=s.box?s.box:this.state.records.currentBox,s.box=a,s&&r===s.name&&n==null)return}if(n?.text==null&&(n={text:r,type:i}),(i==null||n.text==null)&&(n={text:r,type:i}),this.state.records.actors.set(e,{box:a,name:r,description:n.text,wrap:n.wrap??this.autoWrap(),prevActor:this.state.records.prevActor,links:{},properties:{},actorCnt:null,rectData:null,type:i??"participant"}),this.state.records.prevActor){let l=this.state.records.actors.get(this.state.records.prevActor);l&&(l.nextActor=e)}this.state.records.currentBox&&this.state.records.currentBox.actorKeys.push(e),this.state.records.prevActor=e}activationCount(e){let r,n=0;if(!e)return 0;for(r=0;r>-",token:"->>-",line:"1",loc:{first_line:1,last_line:1,first_column:1,last_column:1},expected:["'ACTIVE_PARTICIPANT'"]},l}return this.state.records.messages.push({id:this.state.records.messages.length.toString(),from:e,to:r,message:n?.text??"",wrap:n?.wrap??this.autoWrap(),type:i,activate:a}),!0}hasAtLeastOneBox(){return this.state.records.boxes.length>0}hasAtLeastOneBoxWithTitle(){return this.state.records.boxes.some(e=>e.name)}getMessages(){return this.state.records.messages}getBoxes(){return this.state.records.boxes}getActors(){return this.state.records.actors}getCreatedActors(){return this.state.records.createdActors}getDestroyedActors(){return this.state.records.destroyedActors}getActor(e){return this.state.records.actors.get(e)}getActorKeys(){return[...this.state.records.actors.keys()]}enableSequenceNumbers(){this.state.records.sequenceNumbersEnabled=!0}disableSequenceNumbers(){this.state.records.sequenceNumbersEnabled=!1}showSequenceNumbers(){return this.state.records.sequenceNumbersEnabled}setWrap(e){this.state.records.wrapEnabled=e}extractWrap(e){if(e===void 0)return{};e=e.trim();let r=/^:?wrap:/.exec(e)!==null?!0:/^:?nowrap:/.exec(e)!==null?!1:void 0;return{cleanedText:(r===void 0?e:e.replace(/^:?(?:no)?wrap:/,"")).trim(),wrap:r}}autoWrap(){return this.state.records.wrapEnabled!==void 0?this.state.records.wrapEnabled:me().sequence?.wrap??!1}clear(){this.state.reset(),Ar()}parseMessage(e){let r=e.trim(),{wrap:n,cleanedText:i}=this.extractWrap(r),a={text:i,wrap:n};return Y.debug(`parseMessage: ${JSON.stringify(a)}`),a}parseBoxData(e){let r=/^((?:rgba?|hsla?)\s*\(.*\)|\w*)(.*)$/.exec(e),n=r?.[1]?r[1].trim():"transparent",i=r?.[2]?r[2].trim():void 0;if(window?.CSS)window.CSS.supports("color",n)||(n="transparent",i=e.trim());else{let l=new Option().style;l.color=n,l.color!==n&&(n="transparent",i=e.trim())}let{wrap:a,cleanedText:s}=this.extractWrap(i);return{text:s?Tr(s,me()):void 0,color:n,wrap:a}}addNote(e,r,n){let i={actor:e,placement:r,message:n.text,wrap:n.wrap??this.autoWrap()},a=[].concat(e,e);this.state.records.notes.push(i),this.state.records.messages.push({id:this.state.records.messages.length.toString(),from:a[0],to:a[1],message:n.text,wrap:n.wrap??this.autoWrap(),type:this.LINETYPE.NOTE,placement:r})}addLinks(e,r){let n=this.getActor(e);try{let i=Tr(r.text,me());i=i.replace(/=/g,"="),i=i.replace(/&/g,"&");let a=JSON.parse(i);this.insertLinks(n,a)}catch(i){Y.error("error while parsing actor link text",i)}}addALink(e,r){let n=this.getActor(e);try{let i={},a=Tr(r.text,me()),s=a.indexOf("@");a=a.replace(/=/g,"="),a=a.replace(/&/g,"&");let l=a.slice(0,s-1).trim(),u=a.slice(s+1).trim();i[l]=u,this.insertLinks(n,i)}catch(i){Y.error("error while parsing actor link text",i)}}insertLinks(e,r){if(e.links==null)e.links=r;else for(let n in r)e.links[n]=r[n]}addProperties(e,r){let n=this.getActor(e);try{let i=Tr(r.text,me()),a=JSON.parse(i);this.insertProperties(n,a)}catch(i){Y.error("error while parsing actor properties text",i)}}insertProperties(e,r){if(e.properties==null)e.properties=r;else for(let n in r)e.properties[n]=r[n]}boxEnd(){this.state.records.currentBox=void 0}addDetails(e,r){let n=this.getActor(e),i=document.getElementById(r.text);try{let a=i.innerHTML,s=JSON.parse(a);s.properties&&this.insertProperties(n,s.properties),s.links&&this.insertLinks(n,s.links)}catch(a){Y.error("error while parsing actor details text",a)}}getActorProperty(e,r){if(e?.properties!==void 0)return e.properties[r]}apply(e){if(Array.isArray(e))e.forEach(r=>{this.apply(r)});else switch(e.type){case"sequenceIndex":this.state.records.messages.push({id:this.state.records.messages.length.toString(),from:void 0,to:void 0,message:{start:e.sequenceIndex,step:e.sequenceIndexStep,visible:e.sequenceVisible},wrap:!1,type:e.signalType});break;case"addParticipant":this.addActor(e.actor,e.actor,e.description,e.draw);break;case"createParticipant":if(this.state.records.actors.has(e.actor))throw new Error("It is not possible to have actors with the same id, even if one is destroyed before the next is created. Use 'AS' aliases to simulate the behavior");this.state.records.lastCreated=e.actor,this.addActor(e.actor,e.actor,e.description,e.draw),this.state.records.createdActors.set(e.actor,this.state.records.messages.length);break;case"destroyParticipant":this.state.records.lastDestroyed=e.actor,this.state.records.destroyedActors.set(e.actor,this.state.records.messages.length);break;case"activeStart":this.addSignal(e.actor,void 0,void 0,e.signalType);break;case"activeEnd":this.addSignal(e.actor,void 0,void 0,e.signalType);break;case"addNote":this.addNote(e.actor,e.placement,e.text);break;case"addLinks":this.addLinks(e.actor,e.text);break;case"addALink":this.addALink(e.actor,e.text);break;case"addProperties":this.addProperties(e.actor,e.text);break;case"addDetails":this.addDetails(e.actor,e.text);break;case"addMessage":if(this.state.records.lastCreated){if(e.to!==this.state.records.lastCreated)throw new Error("The created participant "+this.state.records.lastCreated.name+" does not have an associated creating message after its declaration. Please check the sequence diagram.");this.state.records.lastCreated=void 0}else if(this.state.records.lastDestroyed){if(e.to!==this.state.records.lastDestroyed&&e.from!==this.state.records.lastDestroyed)throw new Error("The destroyed participant "+this.state.records.lastDestroyed.name+" does not have an associated destroying message after its declaration. Please check the sequence diagram.");this.state.records.lastDestroyed=void 0}this.addSignal(e.from,e.to,e.msg,e.signalType,e.activate);break;case"boxStart":this.addBox(e.boxData);break;case"boxEnd":this.boxEnd();break;case"loopStart":this.addSignal(void 0,void 0,e.loopText,e.signalType);break;case"loopEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"rectStart":this.addSignal(void 0,void 0,e.color,e.signalType);break;case"rectEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"optStart":this.addSignal(void 0,void 0,e.optText,e.signalType);break;case"optEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"altStart":this.addSignal(void 0,void 0,e.altText,e.signalType);break;case"else":this.addSignal(void 0,void 0,e.altText,e.signalType);break;case"altEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"setAccTitle":Lr(e.text);break;case"parStart":this.addSignal(void 0,void 0,e.parText,e.signalType);break;case"and":this.addSignal(void 0,void 0,e.parText,e.signalType);break;case"parEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"criticalStart":this.addSignal(void 0,void 0,e.criticalText,e.signalType);break;case"option":this.addSignal(void 0,void 0,e.optionText,e.signalType);break;case"criticalEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break;case"breakStart":this.addSignal(void 0,void 0,e.breakText,e.signalType);break;case"breakEnd":this.addSignal(void 0,void 0,void 0,e.signalType);break}}getConfig(){return me().sequence}}});var oVe,hfe,ffe=N(()=>{"use strict";oVe=o(t=>`.actor { + stroke: ${t.actorBorder}; + fill: ${t.actorBkg}; + } + + text.actor > tspan { + fill: ${t.actorTextColor}; + stroke: none; + } + + .actor-line { + stroke: ${t.actorLineColor}; + } + + .messageLine0 { + stroke-width: 1.5; + stroke-dasharray: none; + stroke: ${t.signalColor}; + } + + .messageLine1 { + stroke-width: 1.5; + stroke-dasharray: 2, 2; + stroke: ${t.signalColor}; + } + + #arrowhead path { + fill: ${t.signalColor}; + stroke: ${t.signalColor}; + } + + .sequenceNumber { + fill: ${t.sequenceNumberColor}; + } + + #sequencenumber { + fill: ${t.signalColor}; + } + + #crosshead path { + fill: ${t.signalColor}; + stroke: ${t.signalColor}; + } + + .messageText { + fill: ${t.signalTextColor}; + stroke: none; + } + + .labelBox { + stroke: ${t.labelBoxBorderColor}; + fill: ${t.labelBoxBkgColor}; + } + + .labelText, .labelText > tspan { + fill: ${t.labelTextColor}; + stroke: none; + } + + .loopText, .loopText > tspan { + fill: ${t.loopTextColor}; + stroke: none; + } + + .loopLine { + stroke-width: 2px; + stroke-dasharray: 2, 2; + stroke: ${t.labelBoxBorderColor}; + fill: ${t.labelBoxBorderColor}; + } + + .note { + //stroke: #decc93; + stroke: ${t.noteBorderColor}; + fill: ${t.noteBkgColor}; + } + + .noteText, .noteText > tspan { + fill: ${t.noteTextColor}; + stroke: none; + } + + .activation0 { + fill: ${t.activationBkgColor}; + stroke: ${t.activationBorderColor}; + } + + .activation1 { + fill: ${t.activationBkgColor}; + stroke: ${t.activationBorderColor}; + } + + .activation2 { + fill: ${t.activationBkgColor}; + stroke: ${t.activationBorderColor}; + } + + .actorPopupMenu { + position: absolute; + } + + .actorPopupMenuPanel { + position: absolute; + fill: ${t.actorBkg}; + box-shadow: 0px 8px 16px 0px rgba(0,0,0,0.2); + filter: drop-shadow(3px 5px 2px rgb(0 0 0 / 0.4)); +} + .actor-man line { + stroke: ${t.actorBorder}; + fill: ${t.actorBkg}; + } + .actor-man circle, line { + stroke: ${t.actorBorder}; + fill: ${t.actorBkg}; + stroke-width: 2px; + } +`,"getStyles"),hfe=oVe});var AO,vf,pfe,mfe,lVe,dfe,_O,cVe,uVe,Tb,_p,gfe,Uc,DO,hVe,fVe,dVe,pVe,mVe,gVe,yVe,yfe,vVe,xVe,bVe,wVe,TVe,kVe,EVe,vfe,SVe,LO,CVe,hi,xfe=N(()=>{"use strict";gr();Wv();ir();AO=Sa(z0(),1);ji();vf=18*2,pfe="actor-top",mfe="actor-bottom",lVe="actor-box",dfe="actor-man",_O=o(function(t,e){return kd(t,e)},"drawRect"),cVe=o(function(t,e,r,n,i){if(e.links===void 0||e.links===null||Object.keys(e.links).length===0)return{height:0,width:0};let a=e.links,s=e.actorCnt,l=e.rectData;var u="none";i&&(u="block !important");let h=t.append("g");h.attr("id","actor"+s+"_popup"),h.attr("class","actorPopupMenu"),h.attr("display",u);var f="";l.class!==void 0&&(f=" "+l.class);let d=l.width>r?l.width:r,p=h.append("rect");if(p.attr("class","actorPopupMenuPanel"+f),p.attr("x",l.x),p.attr("y",l.height),p.attr("fill",l.fill),p.attr("stroke",l.stroke),p.attr("width",d),p.attr("height",l.height),p.attr("rx",l.rx),p.attr("ry",l.ry),a!=null){var m=20;for(let v in a){var g=h.append("a"),y=(0,AO.sanitizeUrl)(a[v]);g.attr("xlink:href",y),g.attr("target","_blank"),CVe(n)(v,g,l.x+10,l.height+m,d,20,{class:"actor"},n),m+=30}}return p.attr("height",m),{height:l.height+m,width:d}},"drawPopup"),uVe=o(function(t){return"var pu = document.getElementById('"+t+"'); if (pu != null) { pu.style.display = pu.style.display == 'block' ? 'none' : 'block'; }"},"popupMenuToggle"),Tb=o(async function(t,e,r=null){let n=t.append("foreignObject"),i=await mh(e.text,cr()),s=n.append("xhtml:div").attr("style","width: fit-content;").attr("xmlns","http://www.w3.org/1999/xhtml").html(i).node().getBoundingClientRect();if(n.attr("height",Math.round(s.height)).attr("width",Math.round(s.width)),e.class==="noteText"){let l=t.node().firstChild;l.setAttribute("height",s.height+2*e.textMargin);let u=l.getBBox();n.attr("x",Math.round(u.x+u.width/2-s.width/2)).attr("y",Math.round(u.y+u.height/2-s.height/2))}else if(r){let{startx:l,stopx:u,starty:h}=r;if(l>u){let f=l;l=u,u=f}n.attr("x",Math.round(l+Math.abs(l-u)/2-s.width/2)),e.class==="loopText"?n.attr("y",Math.round(h)):n.attr("y",Math.round(h-s.height))}return[n]},"drawKatex"),_p=o(function(t,e){let r=0,n=0,i=e.text.split(Ze.lineBreakRegex),[a,s]=Bo(e.fontSize),l=[],u=0,h=o(()=>e.y,"yfunc");if(e.valign!==void 0&&e.textMargin!==void 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n=t.append("g"),i=hi.drawRect(n,r),a=Hv();a.x=e.startx,a.y=e.starty,a.width=r.width,a.dy="1em",a.text=e.message,a.class="noteText",a.fontFamily=Ne.noteFontFamily,a.fontSize=Ne.noteFontSize,a.fontWeight=Ne.noteFontWeight,a.anchor=Ne.noteAlign,a.textMargin=Ne.noteMargin,a.valign="center";let s=pi(a.text)?await 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function(t,e,r,n){let{startx:i,stopx:a,starty:s,message:l,type:u,sequenceIndex:h,sequenceVisible:f}=e,d=Gt.calculateTextDimensions(l,Dp(Ne)),p=Hv();p.x=i,p.y=s+10,p.width=a-i,p.class="messageText",p.dy="1em",p.text=l,p.fontFamily=Ne.messageFontFamily,p.fontSize=Ne.messageFontSize,p.fontWeight=Ne.messageFontWeight,p.anchor=Ne.messageAlign,p.valign="center",p.textMargin=Ne.wrapPadding,p.tspan=!1,pi(p.text)?await Tb(t,p,{startx:i,stopx:a,starty:r}):_p(t,p);let m=d.width,g;i===a?Ne.rightAngles?g=t.append("path").attr("d",`M ${i},${r} H ${i+Ze.getMax(Ne.width/2,m/2)} V ${r+25} H ${i}`):g=t.append("path").attr("d","M "+i+","+r+" C "+(i+60)+","+(r-10)+" "+(i+60)+","+(r+30)+" "+i+","+(r+20)):(g=t.append("line"),g.attr("x1",i),g.attr("y1",r),g.attr("x2",a),g.attr("y2",r)),u===n.db.LINETYPE.DOTTED||u===n.db.LINETYPE.DOTTED_CROSS||u===n.db.LINETYPE.DOTTED_POINT||u===n.db.LINETYPE.DOTTED_OPEN||u===n.db.LINETYPE.BIDIRECTIONAL_DOTTED?(g.style("stroke-dasharray","3, 3"),g.attr("class","messageLine1")):g.attr("class","messageLine0");let y="";Ne.arrowMarkerAbsolute&&(y=window.location.protocol+"//"+window.location.host+window.location.pathname+window.location.search,y=y.replace(/\(/g,"\\("),y=y.replace(/\)/g,"\\)")),g.attr("stroke-width",2),g.attr("stroke","none"),g.style("fill","none"),(u===n.db.LINETYPE.SOLID||u===n.db.LINETYPE.DOTTED)&&g.attr("marker-end","url("+y+"#arrowhead)"),(u===n.db.LINETYPE.BIDIRECTIONAL_SOLID||u===n.db.LINETYPE.BIDIRECTIONAL_DOTTED)&&(g.attr("marker-start","url("+y+"#arrowhead)"),g.attr("marker-end","url("+y+"#arrowhead)")),(u===n.db.LINETYPE.SOLID_POINT||u===n.db.LINETYPE.DOTTED_POINT)&&g.attr("marker-end","url("+y+"#filled-head)"),(u===n.db.LINETYPE.SOLID_CROSS||u===n.db.LINETYPE.DOTTED_CROSS)&&g.attr("marker-end","url("+y+"#crosshead)"),(f||Ne.showSequenceNumbers)&&(g.attr("marker-start","url("+y+"#sequencenumber)"),t.append("text").attr("x",i).attr("y",r+4).attr("font-family","sans-serif").attr("font-size","12px").attr("text-anchor","middle").attr("class","sequenceNumber").text(h))},"drawMessage"),LVe=o(function(t,e,r,n,i,a,s){let l=0,u=0,h,f=0;for(let d of n){let p=e.get(d),m=p.box;h&&h!=m&&(s||rt.models.addBox(h),u+=Ne.boxMargin+h.margin),m&&m!=h&&(s||(m.x=l+u,m.y=i),u+=m.margin),p.width=p.width||Ne.width,p.height=Ze.getMax(p.height||Ne.height,Ne.height),p.margin=p.margin||Ne.actorMargin,f=Ze.getMax(f,p.height),r.get(p.name)&&(u+=p.width/2),p.x=l+u,p.starty=rt.getVerticalPos(),rt.insert(p.x,i,p.x+p.width,p.height),l+=p.width+u,p.box&&(p.box.width=l+m.margin-p.box.x),u=p.margin,h=p.box,rt.models.addActor(p)}h&&!s&&rt.models.addBox(h),rt.bumpVerticalPos(f)},"addActorRenderingData"),NO=o(async function(t,e,r,n){if(n){let i=0;rt.bumpVerticalPos(Ne.boxMargin*2);for(let a of r){let s=e.get(a);s.stopy||(s.stopy=rt.getVerticalPos());let l=await hi.drawActor(t,s,Ne,!0);i=Ze.getMax(i,l)}rt.bumpVerticalPos(i+Ne.boxMargin)}else for(let i of r){let a=e.get(i);await hi.drawActor(t,a,Ne,!1)}},"drawActors"),wfe=o(function(t,e,r,n){let i=0,a=0;for(let s of r){let l=e.get(s),u=IVe(l),h=hi.drawPopup(t,l,u,Ne,Ne.forceMenus,n);h.height>i&&(i=h.height),h.width+l.x>a&&(a=h.width+l.x)}return{maxHeight:i,maxWidth:a}},"drawActorsPopup"),Tfe=o(function(t){Gn(Ne,t),t.fontFamily&&(Ne.actorFontFamily=Ne.noteFontFamily=Ne.messageFontFamily=t.fontFamily),t.fontSize&&(Ne.actorFontSize=Ne.noteFontSize=Ne.messageFontSize=t.fontSize),t.fontWeight&&(Ne.actorFontWeight=Ne.noteFontWeight=Ne.messageFontWeight=t.fontWeight)},"setConf"),D6=o(function(t){return rt.activations.filter(function(e){return e.actor===t})},"actorActivations"),bfe=o(function(t,e){let r=e.get(t),n=D6(t),i=n.reduce(function(s,l){return Ze.getMin(s,l.startx)},r.x+r.width/2-1),a=n.reduce(function(s,l){return Ze.getMax(s,l.stopx)},r.x+r.width/2+1);return[i,a]},"activationBounds");o(Hc,"adjustLoopHeightForWrap");o(RVe,"adjustCreatedDestroyedData");NVe=o(async function(t,e,r,n){let{securityLevel:i,sequence:a}=me();Ne=a;let s;i==="sandbox"&&(s=Ge("#i"+e));let l=i==="sandbox"?Ge(s.nodes()[0].contentDocument.body):Ge("body"),u=i==="sandbox"?s.nodes()[0].contentDocument:document;rt.init(),Y.debug(n.db);let h=i==="sandbox"?l.select(`[id="${e}"]`):Ge(`[id="${e}"]`),f=n.db.getActors(),d=n.db.getCreatedActors(),p=n.db.getDestroyedActors(),m=n.db.getBoxes(),g=n.db.getActorKeys(),y=n.db.getMessages(),v=n.db.getDiagramTitle(),x=n.db.hasAtLeastOneBox(),b=n.db.hasAtLeastOneBoxWithTitle(),w=await MVe(f,y,n);if(Ne.height=await OVe(f,w,m),hi.insertComputerIcon(h),hi.insertDatabaseIcon(h),hi.insertClockIcon(h),x&&(rt.bumpVerticalPos(Ne.boxMargin),b&&rt.bumpVerticalPos(m[0].textMaxHeight)),Ne.hideUnusedParticipants===!0){let F=new Set;y.forEach(P=>{F.add(P.from),F.add(P.to)}),g=g.filter(P=>F.has(P))}LVe(h,f,d,g,0,y,!1);let C=await FVe(y,f,w,n);hi.insertArrowHead(h),hi.insertArrowCrossHead(h),hi.insertArrowFilledHead(h),hi.insertSequenceNumber(h);function T(F,P){let z=rt.endActivation(F);z.starty+18>P&&(z.starty=P-6,P+=12),hi.drawActivation(h,z,P,Ne,D6(F.from).length),rt.insert(z.startx,P-10,z.stopx,P)}o(T,"activeEnd");let E=1,A=1,S=[],_=[],I=0;for(let F of y){let P,z,$;switch(F.type){case n.db.LINETYPE.NOTE:rt.resetVerticalPos(),z=F.noteModel,await AVe(h,z);break;case n.db.LINETYPE.ACTIVE_START:rt.newActivation(F,h,f);break;case n.db.LINETYPE.ACTIVE_END:T(F,rt.getVerticalPos());break;case n.db.LINETYPE.LOOP_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H));break;case n.db.LINETYPE.LOOP_END:P=rt.endLoop(),await hi.drawLoop(h,P,"loop",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;case n.db.LINETYPE.RECT_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin,H=>rt.newLoop(void 0,H.message));break;case n.db.LINETYPE.RECT_END:P=rt.endLoop(),_.push(P),rt.models.addLoop(P),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos());break;case n.db.LINETYPE.OPT_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H));break;case n.db.LINETYPE.OPT_END:P=rt.endLoop(),await hi.drawLoop(h,P,"opt",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;case n.db.LINETYPE.ALT_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H));break;case n.db.LINETYPE.ALT_ELSE:Hc(C,F,Ne.boxMargin+Ne.boxTextMargin,Ne.boxMargin,H=>rt.addSectionToLoop(H));break;case n.db.LINETYPE.ALT_END:P=rt.endLoop(),await hi.drawLoop(h,P,"alt",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;case n.db.LINETYPE.PAR_START:case n.db.LINETYPE.PAR_OVER_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H)),rt.saveVerticalPos();break;case n.db.LINETYPE.PAR_AND:Hc(C,F,Ne.boxMargin+Ne.boxTextMargin,Ne.boxMargin,H=>rt.addSectionToLoop(H));break;case n.db.LINETYPE.PAR_END:P=rt.endLoop(),await hi.drawLoop(h,P,"par",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;case n.db.LINETYPE.AUTONUMBER:E=F.message.start||E,A=F.message.step||A,F.message.visible?n.db.enableSequenceNumbers():n.db.disableSequenceNumbers();break;case n.db.LINETYPE.CRITICAL_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H));break;case n.db.LINETYPE.CRITICAL_OPTION:Hc(C,F,Ne.boxMargin+Ne.boxTextMargin,Ne.boxMargin,H=>rt.addSectionToLoop(H));break;case n.db.LINETYPE.CRITICAL_END:P=rt.endLoop(),await hi.drawLoop(h,P,"critical",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;case n.db.LINETYPE.BREAK_START:Hc(C,F,Ne.boxMargin,Ne.boxMargin+Ne.boxTextMargin,H=>rt.newLoop(H));break;case n.db.LINETYPE.BREAK_END:P=rt.endLoop(),await hi.drawLoop(h,P,"break",Ne),rt.bumpVerticalPos(P.stopy-rt.getVerticalPos()),rt.models.addLoop(P);break;default:try{$=F.msgModel,$.starty=rt.getVerticalPos(),$.sequenceIndex=E,$.sequenceVisible=n.db.showSequenceNumbers();let H=await _Ve(h,$);RVe(F,$,H,I,f,d,p),S.push({messageModel:$,lineStartY:H}),rt.models.addMessage($)}catch(H){Y.error("error while drawing message",H)}}[n.db.LINETYPE.SOLID_OPEN,n.db.LINETYPE.DOTTED_OPEN,n.db.LINETYPE.SOLID,n.db.LINETYPE.DOTTED,n.db.LINETYPE.SOLID_CROSS,n.db.LINETYPE.DOTTED_CROSS,n.db.LINETYPE.SOLID_POINT,n.db.LINETYPE.DOTTED_POINT,n.db.LINETYPE.BIDIRECTIONAL_SOLID,n.db.LINETYPE.BIDIRECTIONAL_DOTTED].includes(F.type)&&(E=E+A),I++}Y.debug("createdActors",d),Y.debug("destroyedActors",p),await NO(h,f,g,!1);for(let F of S)await DVe(h,F.messageModel,F.lineStartY,n);Ne.mirrorActors&&await NO(h,f,g,!0),_.forEach(F=>hi.drawBackgroundRect(h,F)),DO(h,f,g,Ne);for(let F of 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g=Gt.calculateTextDimensions(t.message,Dp(Ne));return{width:Ze.getMax(t.wrap?0:g.width+2*Ne.wrapPadding,m+2*Ne.wrapPadding,Ne.width),height:0,startx:u,stopx:h,starty:0,stopy:0,message:t.message,type:t.type,wrap:t.wrap,fromBounds:Math.min.apply(null,p),toBounds:Math.max.apply(null,p)}},"buildMessageModel"),FVe=o(async function(t,e,r,n){let i={},a=[],s,l,u;for(let h of t){switch(h.type){case n.db.LINETYPE.LOOP_START:case n.db.LINETYPE.ALT_START:case n.db.LINETYPE.OPT_START:case n.db.LINETYPE.PAR_START:case n.db.LINETYPE.PAR_OVER_START:case n.db.LINETYPE.CRITICAL_START:case n.db.LINETYPE.BREAK_START:a.push({id:h.id,msg:h.message,from:Number.MAX_SAFE_INTEGER,to:Number.MIN_SAFE_INTEGER,width:0});break;case n.db.LINETYPE.ALT_ELSE:case n.db.LINETYPE.PAR_AND:case n.db.LINETYPE.CRITICAL_OPTION:h.message&&(s=a.pop(),i[s.id]=s,i[h.id]=s,a.push(s));break;case n.db.LINETYPE.LOOP_END:case n.db.LINETYPE.ALT_END:case n.db.LINETYPE.OPT_END:case n.db.LINETYPE.PAR_END:case n.db.LINETYPE.CRITICAL_END:case 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0?s:l.styleEnabled,zoom:Ct(l.zoom)?l.zoom:1,pan:{x:Ur(l.pan)&&Ct(l.pan.x)?l.pan.x:0,y:Ur(l.pan)&&Ct(l.pan.y)?l.pan.y:0},animation:{current:[],queue:[]},hasCompoundNodes:!1,multiClickDebounceTime:u(250,l.multiClickDebounceTime)};this.createEmitter(),this.selectionType(l.selectionType),this.zoomRange({min:l.minZoom,max:l.maxZoom});var f=o(function(g,y){var v=g.some(nWe);if(v)return ey.all(g).then(y);y(g)},"loadExtData");h.styleEnabled&&r.setStyle([]);var d=rr({},l,l.renderer);r.initRenderer(d);var p=o(function(g,y,v){r.notifications(!1);var x=r.mutableElements();x.length>0&&x.remove(),g!=null&&(Ur(g)||En(g))&&r.add(g),r.one("layoutready",function(w){r.notifications(!0),r.emit(w),r.one("load",y),r.emitAndNotify("load")}).one("layoutstop",function(){r.one("done",v),r.emit("done")});var b=rr({},r._private.options.layout);b.eles=r.elements(),r.layout(b).run()},"setElesAndLayout");f([l.style,l.elements],function(m){var g=m[0],y=m[1];h.styleEnabled&&r.style().append(g),p(y,function(){r.startAnimationLoop(),h.ready=!0,si(l.ready)&&r.on("ready",l.ready);for(var v=0;v0,l=!!t.boundingBox,u=e.extent(),h=Hs(l?t.boundingBox:{x1:u.x1,y1:u.y1,w:u.w,h:u.h}),f;if(go(t.roots))f=t.roots;else if(En(t.roots)){for(var d=[],p=0;p0;){var O=R(),M=I(O,k);if(M)O.outgoers().filter(function(ae){return ae.isNode()&&r.has(ae)}).forEach(L);else if(M===null){un("Detected double maximal shift for node `"+O.id()+"`. Bailing maximal adjustment due to cycle. Use `options.maximal: true` only on DAGs.");break}}}var B=0;if(t.avoidOverlap)for(var F=0;F0&&b[0].length<=3?$e/2:0),Ie=2*Math.PI/b[ze].length*He;return ze===0&&b[0].length===1&&(Re=1),{x:se.x+Re*Math.cos(Ie),y:se.y+Re*Math.sin(Ie)}}else{var be=b[ze].length,W=Math.max(be===1?0:l?(h.w-t.padding*2-ue.w)/((t.grid?Se:be)-1):(h.w-t.padding*2-ue.w)/((t.grid?Se:be)+1),B),de={x:se.x+(He+1-(be+1)/2)*W,y:se.y+(ze+1-(ne+1)/2)*Z};return de}},"getPosition");return r.nodes().layoutPositions(this,t,ce),this};rQe={fit:!0,padding:30,boundingBox:void 0,avoidOverlap:!0,nodeDimensionsIncludeLabels:!1,spacingFactor:void 0,radius:void 0,startAngle:3/2*Math.PI,sweep:void 0,clockwise:!0,sort:void 0,animate:!1,animationDuration:500,animationEasing:void 0,animateFilter:o(function(e,r){return!0},"animateFilter"),ready:void 0,stop:void 0,transform:o(function(e,r){return r},"transform")};o(rge,"CircleLayout");rge.prototype.run=function(){var t=this.options,e=t,r=t.cy,n=e.eles,i=e.counterclockwise!==void 0?!e.counterclockwise:e.clockwise,a=n.nodes().not(":parent");e.sort&&(a=a.sort(e.sort));for(var s=Hs(e.boundingBox?e.boundingBox:{x1:0,y1:0,w:r.width(),h:r.height()}),l={x:s.x1+s.w/2,y:s.y1+s.h/2},u=e.sweep===void 0?2*Math.PI-2*Math.PI/a.length:e.sweep,h=u/Math.max(1,a.length-1),f,d=0,p=0;p1&&e.avoidOverlap){d*=1.75;var x=Math.cos(h)-Math.cos(0),b=Math.sin(h)-Math.sin(0),w=Math.sqrt(d*d/(x*x+b*b));f=Math.max(w,f)}var C=o(function(E,A){var S=e.startAngle+A*h*(i?1:-1),_=f*Math.cos(S),I=f*Math.sin(S),D={x:l.x+_,y:l.y+I};return D},"getPos");return n.nodes().layoutPositions(this,e,C),this};nQe={fit:!0,padding:30,startAngle:3/2*Math.PI,sweep:void 0,clockwise:!0,equidistant:!1,minNodeSpacing:10,boundingBox:void 0,avoidOverlap:!0,nodeDimensionsIncludeLabels:!1,height:void 0,width:void 0,spacingFactor:void 0,concentric:o(function(e){return e.degree()},"concentric"),levelWidth:o(function(e){return e.maxDegree()/4},"levelWidth"),animate:!1,animationDuration:500,animationEasing:void 0,animateFilter:o(function(e,r){return!0},"animateFilter"),ready:void 0,stop:void 0,transform:o(function(e,r){return r},"transform")};o(nge,"ConcentricLayout");nge.prototype.run=function(){for(var t=this.options,e=t,r=e.counterclockwise!==void 0?!e.counterclockwise:e.clockwise,n=t.cy,i=e.eles,a=i.nodes().not(":parent"),s=Hs(e.boundingBox?e.boundingBox:{x1:0,y1:0,w:n.width(),h:n.height()}),l={x:s.x1+s.w/2,y:s.y1+s.h/2},u=[],h=0,f=0;f0){var T=Math.abs(b[0].value-C.value);T>=v&&(b=[],x.push(b))}b.push(C)}var E=h+e.minNodeSpacing;if(!e.avoidOverlap){var A=x.length>0&&x[0].length>1,S=Math.min(s.w,s.h)/2-E,_=S/(x.length+A?1:0);E=Math.min(E,_)}for(var I=0,D=0;D1&&e.avoidOverlap){var O=Math.cos(R)-Math.cos(0),M=Math.sin(R)-Math.sin(0),B=Math.sqrt(E*E/(O*O+M*M));I=Math.max(B,I)}k.r=I,I+=E}if(e.equidistant){for(var F=0,P=0,z=0;z=t.numIter||(hQe(n,t),n.temperature=n.temperature*t.coolingFactor,n.temperature=t.animationThreshold&&a(),xS(d)}},"frame");f()}else{for(;h;)h=s(u),u++;E0e(n,t),l()}return this};HS.prototype.stop=function(){return this.stopped=!0,this.thread&&this.thread.stop(),this.emit("layoutstop"),this};HS.prototype.destroy=function(){return this.thread&&this.thread.stop(),this};aQe=o(function(e,r,n){for(var i=n.eles.edges(),a=n.eles.nodes(),s=Hs(n.boundingBox?n.boundingBox:{x1:0,y1:0,w:e.width(),h:e.height()}),l={isCompound:e.hasCompoundNodes(),layoutNodes:[],idToIndex:{},nodeSize:a.size(),graphSet:[],indexToGraph:[],layoutEdges:[],edgeSize:i.size(),temperature:n.initialTemp,clientWidth:s.w,clientHeight:s.h,boundingBox:s},u=n.eles.components(),h={},f=0;f0){l.graphSet.push(S);for(var f=0;fi.count?0:i.graph},"findLCA"),oQe=o(function t(e,r,n,i){var a=i.graphSet[n];if(-10)var d=i.nodeOverlap*f,p=Math.sqrt(l*l+u*u),m=d*l/p,g=d*u/p;else var y=CS(e,l,u),v=CS(r,-1*l,-1*u),x=v.x-y.x,b=v.y-y.y,w=x*x+b*b,p=Math.sqrt(w),d=(e.nodeRepulsion+r.nodeRepulsion)/w,m=d*x/p,g=d*b/p;e.isLocked||(e.offsetX-=m,e.offsetY-=g),r.isLocked||(r.offsetX+=m,r.offsetY+=g)}},"nodeRepulsion"),pQe=o(function(e,r,n,i){if(n>0)var a=e.maxX-r.minX;else var a=r.maxX-e.minX;if(i>0)var s=e.maxY-r.minY;else var s=r.maxY-e.minY;return a>=0&&s>=0?Math.sqrt(a*a+s*s):0},"nodesOverlap"),CS=o(function(e,r,n){var i=e.positionX,a=e.positionY,s=e.height||1,l=e.width||1,u=n/r,h=s/l,f={};return r===0&&0n?(f.x=i,f.y=a+s/2,f):0r&&-1*h<=u&&u<=h?(f.x=i-l/2,f.y=a-l*n/2/r,f):0=h)?(f.x=i+s*r/2/n,f.y=a+s/2,f):(0>n&&(u<=-1*h||u>=h)&&(f.x=i-s*r/2/n,f.y=a-s/2),f)},"findClippingPoint"),mQe=o(function(e,r){for(var n=0;nn){var v=r.gravity*m/y,x=r.gravity*g/y;p.offsetX+=v,p.offsetY+=x}}}}},"calculateGravityForces"),yQe=o(function(e,r){var n=[],i=0,a=-1;for(n.push.apply(n,e.graphSet[0]),a+=e.graphSet[0].length;i<=a;){var s=n[i++],l=e.idToIndex[s],u=e.layoutNodes[l],h=u.children;if(0n)var a={x:n*e/i,y:n*r/i};else var a={x:e,y:r};return a},"limitForce"),bQe=o(function t(e,r){var n=e.parentId;if(n!=null){var i=r.layoutNodes[r.idToIndex[n]],a=!1;if((i.maxX==null||e.maxX+i.padRight>i.maxX)&&(i.maxX=e.maxX+i.padRight,a=!0),(i.minX==null||e.minX-i.padLefti.maxY)&&(i.maxY=e.maxY+i.padBottom,a=!0),(i.minY==null||e.minY-i.padTopx&&(g+=v+r.componentSpacing,m=0,y=0,v=0)}}},"separateComponents"),wQe={fit:!0,padding:30,boundingBox:void 0,avoidOverlap:!0,avoidOverlapPadding:10,nodeDimensionsIncludeLabels:!1,spacingFactor:void 0,condense:!1,rows:void 0,cols:void 0,position:o(function(e){},"position"),sort:void 0,animate:!1,animationDuration:500,animationEasing:void 0,animateFilter:o(function(e,r){return!0},"animateFilter"),ready:void 0,stop:void 0,transform:o(function(e,r){return r},"transform")};o(age,"GridLayout");age.prototype.run=function(){var t=this.options,e=t,r=t.cy,n=e.eles,i=n.nodes().not(":parent");e.sort&&(i=i.sort(e.sort));var a=Hs(e.boundingBox?e.boundingBox:{x1:0,y1:0,w:r.width(),h:r.height()});if(a.h===0||a.w===0)n.nodes().layoutPositions(this,e,function(Q){return{x:a.x1,y:a.y1}});else{var s=i.size(),l=Math.sqrt(s*a.h/a.w),u=Math.round(l),h=Math.round(a.w/a.h*l),f=o(function(j){if(j==null)return Math.min(u,h);var ie=Math.min(u,h);ie==u?u=j:h=j},"small"),d=o(function(j){if(j==null)return Math.max(u,h);var ie=Math.max(u,h);ie==u?u=j:h=j},"large"),p=e.rows,m=e.cols!=null?e.cols:e.columns;if(p!=null&&m!=null)u=p,h=m;else if(p!=null&&m==null)u=p,h=Math.ceil(s/u);else if(p==null&&m!=null)h=m,u=Math.ceil(s/h);else if(h*u>s){var g=f(),y=d();(g-1)*y>=s?f(g-1):(y-1)*g>=s&&d(y-1)}else for(;h*u=s?d(x+1):f(v+1)}var b=a.w/h,w=a.h/u;if(e.condense&&(b=0,w=0),e.avoidOverlap)for(var C=0;C=h&&(O=0,R++)},"moveToNextCell"),B={},F=0;F(O=Wqe(t,e,M[B],M[B+1],M[B+2],M[B+3])))return v(A,O),!0}else if(_.edgeType==="bezier"||_.edgeType==="multibezier"||_.edgeType==="self"||_.edgeType==="compound"){for(var M=_.allpts,B=0;B+5<_.allpts.length;B+=4)if(Gqe(t,e,M[B],M[B+1],M[B+2],M[B+3],M[B+4],M[B+5],R)&&L>(O=Hqe(t,e,M[B],M[B+1],M[B+2],M[B+3],M[B+4],M[B+5])))return v(A,O),!0}for(var F=F||S.source,P=P||S.target,z=i.getArrowWidth(I,D),$=[{name:"source",x:_.arrowStartX,y:_.arrowStartY,angle:_.srcArrowAngle},{name:"target",x:_.arrowEndX,y:_.arrowEndY,angle:_.tgtArrowAngle},{name:"mid-source",x:_.midX,y:_.midY,angle:_.midsrcArrowAngle},{name:"mid-target",x:_.midX,y:_.midY,angle:_.midtgtArrowAngle}],B=0;B<$.length;B++){var H=$[B],Q=a.arrowShapes[A.pstyle(H.name+"-arrow-shape").value],j=A.pstyle("width").pfValue;if(Q.roughCollide(t,e,z,H.angle,{x:H.x,y:H.y},j,f)&&Q.collide(t,e,z,H.angle,{x:H.x,y:H.y},j,f))return v(A),!0}h&&l.length>0&&(x(F),x(P))}o(b,"checkEdge");function w(A,S,_){return Gl(A,S,_)}o(w,"preprop");function C(A,S){var _=A._private,I=p,D;S?D=S+"-":D="",A.boundingBox();var k=_.labelBounds[S||"main"],L=A.pstyle(D+"label").value,R=A.pstyle("text-events").strValue==="yes";if(!(!R||!L)){var O=w(_.rscratch,"labelX",S),M=w(_.rscratch,"labelY",S),B=w(_.rscratch,"labelAngle",S),F=A.pstyle(D+"text-margin-x").pfValue,P=A.pstyle(D+"text-margin-y").pfValue,z=k.x1-I-F,$=k.x2+I-F,H=k.y1-I-P,Q=k.y2+I-P;if(B){var j=Math.cos(B),ie=Math.sin(B),ne=o(function(se,ue){return se=se-O,ue=ue-M,{x:se*j-ue*ie+O,y:se*ie+ue*j+M}},"rotate"),le=ne(z,H),he=ne(z,Q),K=ne($,H),X=ne($,Q),te=[le.x+F,le.y+P,K.x+F,K.y+P,X.x+F,X.y+P,he.x+F,he.y+P];if(Us(t,e,te))return v(A),!0}else if(K1(k,t,e))return v(A),!0}}o(C,"checkLabel");for(var T=s.length-1;T>=0;T--){var E=s[T];E.isNode()?x(E)||C(E):b(E)||C(E)||C(E,"source")||C(E,"target")}return l};qp.getAllInBox=function(t,e,r,n){var i=this.getCachedZSortedEles().interactive,a=[],s=Math.min(t,r),l=Math.max(t,r),u=Math.min(e,n),h=Math.max(e,n);t=s,r=l,e=u,n=h;for(var f=Hs({x1:t,y1:e,x2:r,y2:n}),d=0;d0?-(Math.PI-e.ang):Math.PI+e.ang},"invertVec"),AQe=o(function(e,r,n,i,a){if(e!==D0e?L0e(r,e,qc):CQe(Jo,qc),L0e(r,n,Jo),A0e=qc.nx*Jo.ny-qc.ny*Jo.nx,_0e=qc.nx*Jo.nx-qc.ny*-Jo.ny,Ku=Math.asin(Math.max(-1,Math.min(1,A0e))),Math.abs(Ku)<1e-6){HP=r.x,WP=r.y,Bp=G1=0;return}Fp=1,gS=!1,_0e<0?Ku<0?Ku=Math.PI+Ku:(Ku=Math.PI-Ku,Fp=-1,gS=!0):Ku>0&&(Fp=-1,gS=!0),r.radius!==void 0?G1=r.radius:G1=i,Mp=Ku/2,aS=Math.min(qc.len/2,Jo.len/2),a?(Wc=Math.abs(Math.cos(Mp)*G1/Math.sin(Mp)),Wc>aS?(Wc=aS,Bp=Math.abs(Wc*Math.sin(Mp)/Math.cos(Mp))):Bp=G1):(Wc=Math.min(aS,G1),Bp=Math.abs(Wc*Math.sin(Mp)/Math.cos(Mp))),qP=r.x+Jo.nx*Wc,YP=r.y+Jo.ny*Wc,HP=qP-Jo.ny*Bp*Fp,WP=YP+Jo.nx*Bp*Fp,cge=r.x+qc.nx*Wc,uge=r.y+qc.ny*Wc,D0e=r},"calcCornerArc");o(hge,"drawPreparedRoundCorner");o(vB,"getRoundCorner");Va={};Va.findMidptPtsEtc=function(t,e){var r=e.posPts,n=e.intersectionPts,i=e.vectorNormInverse,a,s=t.pstyle("source-endpoint"),l=t.pstyle("target-endpoint"),u=s.units!=null&&l.units!=null,h=o(function(T,E,A,S){var _=S-E,I=A-T,D=Math.sqrt(I*I+_*_);return{x:-_/D,y:I/D}},"recalcVectorNormInverse"),f=t.pstyle("edge-distances").value;switch(f){case"node-position":a=r;break;case"intersection":a=n;break;case"endpoints":{if(u){var d=this.manualEndptToPx(t.source()[0],s),p=_i(d,2),m=p[0],g=p[1],y=this.manualEndptToPx(t.target()[0],l),v=_i(y,2),x=v[0],b=v[1],w={x1:m,y1:g,x2:x,y2:b};i=h(m,g,x,b),a=w}else un("Edge ".concat(t.id()," has edge-distances:endpoints specified without manual endpoints specified via source-endpoint and target-endpoint. Falling back on edge-distances:intersection (default).")),a=n;break}}return{midptPts:a,vectorNormInverse:i}};Va.findHaystackPoints=function(t){for(var e=0;e0?Math.max(q-pe,0):Math.min(q+pe,0)},"subDWH"),L=k(I,S),R=k(D,_),O=!1;b===h?x=Math.abs(L)>Math.abs(R)?i:n:b===u||b===l?(x=n,O=!0):(b===a||b===s)&&(x=i,O=!0);var M=x===n,B=M?R:L,F=M?D:I,P=mme(F),z=!1;!(O&&(C||E))&&(b===l&&F<0||b===u&&F>0||b===a&&F>0||b===s&&F<0)&&(P*=-1,B=P*Math.abs(B),z=!0);var $;if(C){var H=T<0?1+T:T;$=H*B}else{var Q=T<0?B:0;$=Q+T*P}var j=o(function(q){return Math.abs(q)=Math.abs(B)},"getIsTooClose"),ie=j($),ne=j(Math.abs(B)-Math.abs($)),le=ie||ne;if(le&&!z)if(M){var he=Math.abs(F)<=p/2,K=Math.abs(I)<=m/2;if(he){var X=(f.x1+f.x2)/2,te=f.y1,J=f.y2;r.segpts=[X,te,X,J]}else if(K){var se=(f.y1+f.y2)/2,ue=f.x1,Z=f.x2;r.segpts=[ue,se,Z,se]}else r.segpts=[f.x1,f.y2]}else{var Se=Math.abs(F)<=d/2,ce=Math.abs(D)<=g/2;if(Se){var ae=(f.y1+f.y2)/2,Oe=f.x1,ge=f.x2;r.segpts=[Oe,ae,ge,ae]}else if(ce){var ze=(f.x1+f.x2)/2,He=f.y1,$e=f.y2;r.segpts=[ze,He,ze,$e]}else r.segpts=[f.x2,f.y1]}else if(M){var Re=f.y1+$+(v?p/2*P:0),Ie=f.x1,be=f.x2;r.segpts=[Ie,Re,be,Re]}else{var W=f.x1+$+(v?d/2*P:0),de=f.y1,re=f.y2;r.segpts=[W,de,W,re]}if(r.isRound){var oe=t.pstyle("taxi-radius").value,V=t.pstyle("radius-type").value[0]==="arc-radius";r.radii=new Array(r.segpts.length/2).fill(oe),r.isArcRadius=new Array(r.segpts.length/2).fill(V)}};Va.tryToCorrectInvalidPoints=function(t,e){var r=t._private.rscratch;if(r.edgeType==="bezier"){var n=e.srcPos,i=e.tgtPos,a=e.srcW,s=e.srcH,l=e.tgtW,u=e.tgtH,h=e.srcShape,f=e.tgtShape,d=e.srcCornerRadius,p=e.tgtCornerRadius,m=e.srcRs,g=e.tgtRs,y=!Ct(r.startX)||!Ct(r.startY),v=!Ct(r.arrowStartX)||!Ct(r.arrowStartY),x=!Ct(r.endX)||!Ct(r.endY),b=!Ct(r.arrowEndX)||!Ct(r.arrowEndY),w=3,C=this.getArrowWidth(t.pstyle("width").pfValue,t.pstyle("arrow-scale").value)*this.arrowShapeWidth,T=w*C,E=Gp({x:r.ctrlpts[0],y:r.ctrlpts[1]},{x:r.startX,y:r.startY}),A=ER.poolIndex()){var O=L;L=R,R=O}var M=_.srcPos=L.position(),B=_.tgtPos=R.position(),F=_.srcW=L.outerWidth(),P=_.srcH=L.outerHeight(),z=_.tgtW=R.outerWidth(),$=_.tgtH=R.outerHeight(),H=_.srcShape=r.nodeShapes[e.getNodeShape(L)],Q=_.tgtShape=r.nodeShapes[e.getNodeShape(R)],j=_.srcCornerRadius=L.pstyle("corner-radius").value==="auto"?"auto":L.pstyle("corner-radius").pfValue,ie=_.tgtCornerRadius=R.pstyle("corner-radius").value==="auto"?"auto":R.pstyle("corner-radius").pfValue,ne=_.tgtRs=R._private.rscratch,le=_.srcRs=L._private.rscratch;_.dirCounts={north:0,west:0,south:0,east:0,northwest:0,southwest:0,northeast:0,southeast:0};for(var he=0;he<_.eles.length;he++){var K=_.eles[he],X=K[0]._private.rscratch,te=K.pstyle("curve-style").value,J=te==="unbundled-bezier"||te.endsWith("segments")||te.endsWith("taxi"),se=!L.same(K.source());if(!_.calculatedIntersection&&L!==R&&(_.hasBezier||_.hasUnbundled)){_.calculatedIntersection=!0;var ue=H.intersectLine(M.x,M.y,F,P,B.x,B.y,0,j,le),Z=_.srcIntn=ue,Se=Q.intersectLine(B.x,B.y,z,$,M.x,M.y,0,ie,ne),ce=_.tgtIntn=Se,ae=_.intersectionPts={x1:ue[0],x2:Se[0],y1:ue[1],y2:Se[1]},Oe=_.posPts={x1:M.x,x2:B.x,y1:M.y,y2:B.y},ge=Se[1]-ue[1],ze=Se[0]-ue[0],He=Math.sqrt(ze*ze+ge*ge),$e=_.vector={x:ze,y:ge},Re=_.vectorNorm={x:$e.x/He,y:$e.y/He},Ie={x:-Re.y,y:Re.x};_.nodesOverlap=!Ct(He)||Q.checkPoint(ue[0],ue[1],0,z,$,B.x,B.y,ie,ne)||H.checkPoint(Se[0],Se[1],0,F,P,M.x,M.y,j,le),_.vectorNormInverse=Ie,I={nodesOverlap:_.nodesOverlap,dirCounts:_.dirCounts,calculatedIntersection:!0,hasBezier:_.hasBezier,hasUnbundled:_.hasUnbundled,eles:_.eles,srcPos:B,srcRs:ne,tgtPos:M,tgtRs:le,srcW:z,srcH:$,tgtW:F,tgtH:P,srcIntn:ce,tgtIntn:Z,srcShape:Q,tgtShape:H,posPts:{x1:Oe.x2,y1:Oe.y2,x2:Oe.x1,y2:Oe.y1},intersectionPts:{x1:ae.x2,y1:ae.y2,x2:ae.x1,y2:ae.y1},vector:{x:-$e.x,y:-$e.y},vectorNorm:{x:-Re.x,y:-Re.y},vectorNormInverse:{x:-Ie.x,y:-Ie.y}}}var be=se?I:_;X.nodesOverlap=be.nodesOverlap,X.srcIntn=be.srcIntn,X.tgtIntn=be.tgtIntn,X.isRound=te.startsWith("round"),i&&(L.isParent()||L.isChild()||R.isParent()||R.isChild())&&(L.parents().anySame(R)||R.parents().anySame(L)||L.same(R)&&L.isParent())?e.findCompoundLoopPoints(K,be,he,J):L===R?e.findLoopPoints(K,be,he,J):te.endsWith("segments")?e.findSegmentsPoints(K,be):te.endsWith("taxi")?e.findTaxiPoints(K,be):te==="straight"||!J&&_.eles.length%2===1&&he===Math.floor(_.eles.length/2)?e.findStraightEdgePoints(K):e.findBezierPoints(K,be,he,J,se),e.findEndpoints(K),e.tryToCorrectInvalidPoints(K,be),e.checkForInvalidEdgeWarning(K),e.storeAllpts(K),e.storeEdgeProjections(K),e.calculateArrowAngles(K),e.recalculateEdgeLabelProjections(K),e.calculateLabelAngles(K)}},"_loop"),T=0;T0){var J=a,se=Op(J,U1(r)),ue=Op(J,U1(te)),Z=se;if(ue2){var Se=Op(J,{x:te[2],y:te[3]});Se0){var re=s,oe=Op(re,U1(r)),V=Op(re,U1(de)),xe=oe;if(V2){var q=Op(re,{x:de[2],y:de[3]});q=g||A){v={cp:C,segment:E};break}}if(v)break}var S=v.cp,_=v.segment,I=(g-x)/_.length,D=_.t1-_.t0,k=m?_.t0+D*I:_.t1-D*I;k=Yb(0,k,1),e=W1(S.p0,S.p1,S.p2,k),p=DQe(S.p0,S.p1,S.p2,k);break}case"straight":case"segments":case"haystack":{for(var L=0,R,O,M,B,F=n.allpts.length,P=0;P+3=g));P+=2);var z=g-O,$=z/R;$=Yb(0,$,1),e=Iqe(M,B,$),p=pge(M,B);break}}s("labelX",d,e.x),s("labelY",d,e.y),s("labelAutoAngle",d,p)}},"calculateEndProjection");h("source"),h("target"),this.applyLabelDimensions(t)}};Kc.applyLabelDimensions=function(t){this.applyPrefixedLabelDimensions(t),t.isEdge()&&(this.applyPrefixedLabelDimensions(t,"source"),this.applyPrefixedLabelDimensions(t,"target"))};Kc.applyPrefixedLabelDimensions=function(t,e){var r=t._private,n=this.getLabelText(t,e),i=this.calculateLabelDimensions(t,n),a=t.pstyle("line-height").pfValue,s=t.pstyle("text-wrap").strValue,l=Gl(r.rscratch,"labelWrapCachedLines",e)||[],u=s!=="wrap"?1:Math.max(l.length,1),h=i.height/u,f=h*a,d=i.width,p=i.height+(u-1)*(a-1)*h;kf(r.rstyle,"labelWidth",e,d),kf(r.rscratch,"labelWidth",e,d),kf(r.rstyle,"labelHeight",e,p),kf(r.rscratch,"labelHeight",e,p),kf(r.rscratch,"labelLineHeight",e,f)};Kc.getLabelText=function(t,e){var r=t._private,n=e?e+"-":"",i=t.pstyle(n+"label").strValue,a=t.pstyle("text-transform").value,s=o(function(Q,j){return j?(kf(r.rscratch,Q,e,j),j):Gl(r.rscratch,Q,e)},"rscratch");if(!i)return"";a=="none"||(a=="uppercase"?i=i.toUpperCase():a=="lowercase"&&(i=i.toLowerCase()));var l=t.pstyle("text-wrap").value;if(l==="wrap"){var u=s("labelKey");if(u!=null&&s("labelWrapKey")===u)return s("labelWrapCachedText");for(var h="\u200B",f=i.split(` +`),d=t.pstyle("text-max-width").pfValue,p=t.pstyle("text-overflow-wrap").value,m=p==="anywhere",g=[],y=/[\s\u200b]+|$/g,v=0;vd){var T=x.matchAll(y),E="",A=0,S=mo(T),_;try{for(S.s();!(_=S.n()).done;){var I=_.value,D=I[0],k=x.substring(A,I.index);A=I.index+D.length;var L=E.length===0?k:E+k+D,R=this.calculateLabelDimensions(t,L),O=R.width;O<=d?E+=k+D:(E&&g.push(E),E=k+D)}}catch(H){S.e(H)}finally{S.f()}E.match(/^[\s\u200b]+$/)||g.push(E)}else g.push(x)}s("labelWrapCachedLines",g),i=s("labelWrapCachedText",g.join(` +`)),s("labelWrapKey",u)}else if(l==="ellipsis"){var M=t.pstyle("text-max-width").pfValue,B="",F="\u2026",P=!1;if(this.calculateLabelDimensions(t,i).widthM)break;B+=i[z],z===i.length-1&&(P=!0)}return P||(B+=F),B}return i};Kc.getLabelJustification=function(t){var e=t.pstyle("text-justification").strValue,r=t.pstyle("text-halign").strValue;if(e==="auto")if(t.isNode())switch(r){case"left":return"right";case"right":return"left";default:return"center"}else return"center";else return e};Kc.calculateLabelDimensions=function(t,e){var r=this,n=r.cy.window(),i=n.document,a=_f(e,t._private.labelDimsKey),s=r.labelDimCache||(r.labelDimCache=[]),l=s[a];if(l!=null)return l;var u=0,h=t.pstyle("font-style").strValue,f=t.pstyle("font-size").pfValue,d=t.pstyle("font-family").strValue,p=t.pstyle("font-weight").strValue,m=this.labelCalcCanvas,g=this.labelCalcCanvasContext;if(!m){m=this.labelCalcCanvas=i.createElement("canvas"),g=this.labelCalcCanvasContext=m.getContext("2d");var y=m.style;y.position="absolute",y.left="-9999px",y.top="-9999px",y.zIndex="-1",y.visibility="hidden",y.pointerEvents="none"}g.font="".concat(h," ").concat(p," ").concat(f,"px ").concat(d);for(var v=0,x=0,b=e.split(` +`),w=0;w1&&arguments[1]!==void 0?arguments[1]:!0;if(e.merge(s),l)for(var u=0;u=t.desktopTapThreshold2}var ot=a(W);at&&(t.hoverData.tapholdCancelled=!0);var Yt=o(function(){var Tt=t.hoverData.dragDelta=t.hoverData.dragDelta||[];Tt.length===0?(Tt.push(De[0]),Tt.push(De[1])):(Tt[0]+=De[0],Tt[1]+=De[1])},"updateDragDelta");re=!0,i(_e,["mousemove","vmousemove","tapdrag"],W,{x:q[0],y:q[1]});var bt=o(function(){t.data.bgActivePosistion=void 0,t.hoverData.selecting||oe.emit({originalEvent:W,type:"boxstart",position:{x:q[0],y:q[1]}}),Pe[4]=1,t.hoverData.selecting=!0,t.redrawHint("select",!0),t.redraw()},"goIntoBoxMode");if(t.hoverData.which===3){if(at){var Mt={originalEvent:W,type:"cxtdrag",position:{x:q[0],y:q[1]}};Ve?Ve.emit(Mt):oe.emit(Mt),t.hoverData.cxtDragged=!0,(!t.hoverData.cxtOver||_e!==t.hoverData.cxtOver)&&(t.hoverData.cxtOver&&t.hoverData.cxtOver.emit({originalEvent:W,type:"cxtdragout",position:{x:q[0],y:q[1]}}),t.hoverData.cxtOver=_e,_e&&_e.emit({originalEvent:W,type:"cxtdragover",position:{x:q[0],y:q[1]}}))}}else if(t.hoverData.dragging){if(re=!0,oe.panningEnabled()&&oe.userPanningEnabled()){var xt;if(t.hoverData.justStartedPan){var ut=t.hoverData.mdownPos;xt={x:(q[0]-ut[0])*V,y:(q[1]-ut[1])*V},t.hoverData.justStartedPan=!1}else xt={x:De[0]*V,y:De[1]*V};oe.panBy(xt),oe.emit("dragpan"),t.hoverData.dragged=!0}q=t.projectIntoViewport(W.clientX,W.clientY)}else if(Pe[4]==1&&(Ve==null||Ve.pannable())){if(at){if(!t.hoverData.dragging&&oe.boxSelectionEnabled()&&(ot||!oe.panningEnabled()||!oe.userPanningEnabled()))bt();else if(!t.hoverData.selecting&&oe.panningEnabled()&&oe.userPanningEnabled()){var Et=s(Ve,t.hoverData.downs);Et&&(t.hoverData.dragging=!0,t.hoverData.justStartedPan=!0,Pe[4]=0,t.data.bgActivePosistion=U1(pe),t.redrawHint("select",!0),t.redraw())}Ve&&Ve.pannable()&&Ve.active()&&Ve.unactivate()}}else{if(Ve&&Ve.pannable()&&Ve.active()&&Ve.unactivate(),(!Ve||!Ve.grabbed())&&_e!=we&&(we&&i(we,["mouseout","tapdragout"],W,{x:q[0],y:q[1]}),_e&&i(_e,["mouseover","tapdragover"],W,{x:q[0],y:q[1]}),t.hoverData.last=_e),Ve)if(at){if(oe.boxSelectionEnabled()&&ot)Ve&&Ve.grabbed()&&(x(qe),Ve.emit("freeon"),qe.emit("free"),t.dragData.didDrag&&(Ve.emit("dragfreeon"),qe.emit("dragfree"))),bt();else if(Ve&&Ve.grabbed()&&t.nodeIsDraggable(Ve)){var ft=!t.dragData.didDrag;ft&&t.redrawHint("eles",!0),t.dragData.didDrag=!0,t.hoverData.draggingEles||y(qe,{inDragLayer:!0});var yt={x:0,y:0};if(Ct(De[0])&&Ct(De[1])&&(yt.x+=De[0],yt.y+=De[1],ft)){var nt=t.hoverData.dragDelta;nt&&Ct(nt[0])&&Ct(nt[1])&&(yt.x+=nt[0],yt.y+=nt[1])}t.hoverData.draggingEles=!0,qe.silentShift(yt).emit("position drag"),t.redrawHint("drag",!0),t.redraw()}}else Yt();re=!0}if(Pe[2]=q[0],Pe[3]=q[1],re)return W.stopPropagation&&W.stopPropagation(),W.preventDefault&&W.preventDefault(),!1}},"mousemoveHandler"),!1);var k,L,R;t.registerBinding(e,"mouseup",o(function(W){if(!(t.hoverData.which===1&&W.which!==1&&t.hoverData.capture)){var de=t.hoverData.capture;if(de){t.hoverData.capture=!1;var re=t.cy,oe=t.projectIntoViewport(W.clientX,W.clientY),V=t.selection,xe=t.findNearestElement(oe[0],oe[1],!0,!1),q=t.dragData.possibleDragElements,pe=t.hoverData.down,ve=a(W);if(t.data.bgActivePosistion&&(t.redrawHint("select",!0),t.redraw()),t.hoverData.tapholdCancelled=!0,t.data.bgActivePosistion=void 0,pe&&pe.unactivate(),t.hoverData.which===3){var Pe={originalEvent:W,type:"cxttapend",position:{x:oe[0],y:oe[1]}};if(pe?pe.emit(Pe):re.emit(Pe),!t.hoverData.cxtDragged){var _e={originalEvent:W,type:"cxttap",position:{x:oe[0],y:oe[1]}};pe?pe.emit(_e):re.emit(_e)}t.hoverData.cxtDragged=!1,t.hoverData.which=null}else if(t.hoverData.which===1){if(i(xe,["mouseup","tapend","vmouseup"],W,{x:oe[0],y:oe[1]}),!t.dragData.didDrag&&!t.hoverData.dragged&&!t.hoverData.selecting&&!t.hoverData.isOverThresholdDrag&&(i(pe,["click","tap","vclick"],W,{x:oe[0],y:oe[1]}),L=!1,W.timeStamp-R<=re.multiClickDebounceTime()?(k&&clearTimeout(k),L=!0,R=null,i(pe,["dblclick","dbltap","vdblclick"],W,{x:oe[0],y:oe[1]})):(k=setTimeout(function(){L||i(pe,["oneclick","onetap","voneclick"],W,{x:oe[0],y:oe[1]})},re.multiClickDebounceTime()),R=W.timeStamp)),pe==null&&!t.dragData.didDrag&&!t.hoverData.selecting&&!t.hoverData.dragged&&!a(W)&&(re.$(r).unselect(["tapunselect"]),q.length>0&&t.redrawHint("eles",!0),t.dragData.possibleDragElements=q=re.collection()),xe==pe&&!t.dragData.didDrag&&!t.hoverData.selecting&&xe!=null&&xe._private.selectable&&(t.hoverData.dragging||(re.selectionType()==="additive"||ve?xe.selected()?xe.unselect(["tapunselect"]):xe.select(["tapselect"]):ve||(re.$(r).unmerge(xe).unselect(["tapunselect"]),xe.select(["tapselect"]))),t.redrawHint("eles",!0)),t.hoverData.selecting){var we=re.collection(t.getAllInBox(V[0],V[1],V[2],V[3]));t.redrawHint("select",!0),we.length>0&&t.redrawHint("eles",!0),re.emit({type:"boxend",originalEvent:W,position:{x:oe[0],y:oe[1]}});var Ve=o(function(at){return at.selectable()&&!at.selected()},"eleWouldBeSelected");re.selectionType()==="additive"||ve||re.$(r).unmerge(we).unselect(),we.emit("box").stdFilter(Ve).select().emit("boxselect"),t.redraw()}if(t.hoverData.dragging&&(t.hoverData.dragging=!1,t.redrawHint("select",!0),t.redrawHint("eles",!0),t.redraw()),!V[4]){t.redrawHint("drag",!0),t.redrawHint("eles",!0);var De=pe&&pe.grabbed();x(q),De&&(pe.emit("freeon"),q.emit("free"),t.dragData.didDrag&&(pe.emit("dragfreeon"),q.emit("dragfree")))}}V[4]=0,t.hoverData.down=null,t.hoverData.cxtStarted=!1,t.hoverData.draggingEles=!1,t.hoverData.selecting=!1,t.hoverData.isOverThresholdDrag=!1,t.dragData.didDrag=!1,t.hoverData.dragged=!1,t.hoverData.dragDelta=[],t.hoverData.mdownPos=null,t.hoverData.mdownGPos=null,t.hoverData.which=null}}},"mouseupHandler"),!1);var O=o(function(W){if(!t.scrollingPage){var de=t.cy,re=de.zoom(),oe=de.pan(),V=t.projectIntoViewport(W.clientX,W.clientY),xe=[V[0]*re+oe.x,V[1]*re+oe.y];if(t.hoverData.draggingEles||t.hoverData.dragging||t.hoverData.cxtStarted||_()){W.preventDefault();return}if(de.panningEnabled()&&de.userPanningEnabled()&&de.zoomingEnabled()&&de.userZoomingEnabled()){W.preventDefault(),t.data.wheelZooming=!0,clearTimeout(t.data.wheelTimeout),t.data.wheelTimeout=setTimeout(function(){t.data.wheelZooming=!1,t.redrawHint("eles",!0),t.redraw()},150);var q;W.deltaY!=null?q=W.deltaY/-250:W.wheelDeltaY!=null?q=W.wheelDeltaY/1e3:q=W.wheelDelta/1e3,q=q*t.wheelSensitivity;var pe=W.deltaMode===1;pe&&(q*=33);var ve=de.zoom()*Math.pow(10,q);W.type==="gesturechange"&&(ve=t.gestureStartZoom*W.scale),de.zoom({level:ve,renderedPosition:{x:xe[0],y:xe[1]}}),de.emit(W.type==="gesturechange"?"pinchzoom":"scrollzoom")}}},"wheelHandler");t.registerBinding(t.container,"wheel",O,!0),t.registerBinding(e,"scroll",o(function(W){t.scrollingPage=!0,clearTimeout(t.scrollingPageTimeout),t.scrollingPageTimeout=setTimeout(function(){t.scrollingPage=!1},250)},"scrollHandler"),!0),t.registerBinding(t.container,"gesturestart",o(function(W){t.gestureStartZoom=t.cy.zoom(),t.hasTouchStarted||W.preventDefault()},"gestureStartHandler"),!0),t.registerBinding(t.container,"gesturechange",function(be){t.hasTouchStarted||O(be)},!0),t.registerBinding(t.container,"mouseout",o(function(W){var de=t.projectIntoViewport(W.clientX,W.clientY);t.cy.emit({originalEvent:W,type:"mouseout",position:{x:de[0],y:de[1]}})},"mouseOutHandler"),!1),t.registerBinding(t.container,"mouseover",o(function(W){var de=t.projectIntoViewport(W.clientX,W.clientY);t.cy.emit({originalEvent:W,type:"mouseover",position:{x:de[0],y:de[1]}})},"mouseOverHandler"),!1);var M,B,F,P,z,$,H,Q,j,ie,ne,le,he,K=o(function(W,de,re,oe){return Math.sqrt((re-W)*(re-W)+(oe-de)*(oe-de))},"distance"),X=o(function(W,de,re,oe){return(re-W)*(re-W)+(oe-de)*(oe-de)},"distanceSq"),te;t.registerBinding(t.container,"touchstart",te=o(function(W){if(t.hasTouchStarted=!0,!!I(W)){w(),t.touchData.capture=!0,t.data.bgActivePosistion=void 0;var de=t.cy,re=t.touchData.now,oe=t.touchData.earlier;if(W.touches[0]){var V=t.projectIntoViewport(W.touches[0].clientX,W.touches[0].clientY);re[0]=V[0],re[1]=V[1]}if(W.touches[1]){var V=t.projectIntoViewport(W.touches[1].clientX,W.touches[1].clientY);re[2]=V[0],re[3]=V[1]}if(W.touches[2]){var V=t.projectIntoViewport(W.touches[2].clientX,W.touches[2].clientY);re[4]=V[0],re[5]=V[1]}if(W.touches[1]){t.touchData.singleTouchMoved=!0,x(t.dragData.touchDragEles);var xe=t.findContainerClientCoords();j=xe[0],ie=xe[1],ne=xe[2],le=xe[3],M=W.touches[0].clientX-j,B=W.touches[0].clientY-ie,F=W.touches[1].clientX-j,P=W.touches[1].clientY-ie,he=0<=M&&M<=ne&&0<=F&&F<=ne&&0<=B&&B<=le&&0<=P&&P<=le;var q=de.pan(),pe=de.zoom();z=K(M,B,F,P),$=X(M,B,F,P),H=[(M+F)/2,(B+P)/2],Q=[(H[0]-q.x)/pe,(H[1]-q.y)/pe];var ve=200,Pe=ve*ve;if($=1){for(var st=t.touchData.startPosition=[null,null,null,null,null,null],Ue=0;Ue=t.touchTapThreshold2}if(de&&t.touchData.cxt){W.preventDefault();var st=W.touches[0].clientX-j,Ue=W.touches[0].clientY-ie,ct=W.touches[1].clientX-j,We=W.touches[1].clientY-ie,ot=X(st,Ue,ct,We),Yt=ot/$,bt=150,Mt=bt*bt,xt=1.5,ut=xt*xt;if(Yt>=ut||ot>=Mt){t.touchData.cxt=!1,t.data.bgActivePosistion=void 0,t.redrawHint("select",!0);var Et={originalEvent:W,type:"cxttapend",position:{x:V[0],y:V[1]}};t.touchData.start?(t.touchData.start.unactivate().emit(Et),t.touchData.start=null):oe.emit(Et)}}if(de&&t.touchData.cxt){var Et={originalEvent:W,type:"cxtdrag",position:{x:V[0],y:V[1]}};t.data.bgActivePosistion=void 0,t.redrawHint("select",!0),t.touchData.start?t.touchData.start.emit(Et):oe.emit(Et),t.touchData.start&&(t.touchData.start._private.grabbed=!1),t.touchData.cxtDragged=!0;var ft=t.findNearestElement(V[0],V[1],!0,!0);(!t.touchData.cxtOver||ft!==t.touchData.cxtOver)&&(t.touchData.cxtOver&&t.touchData.cxtOver.emit({originalEvent:W,type:"cxtdragout",position:{x:V[0],y:V[1]}}),t.touchData.cxtOver=ft,ft&&ft.emit({originalEvent:W,type:"cxtdragover",position:{x:V[0],y:V[1]}}))}else if(de&&W.touches[2]&&oe.boxSelectionEnabled())W.preventDefault(),t.data.bgActivePosistion=void 0,this.lastThreeTouch=+new Date,t.touchData.selecting||oe.emit({originalEvent:W,type:"boxstart",position:{x:V[0],y:V[1]}}),t.touchData.selecting=!0,t.touchData.didSelect=!0,re[4]=1,!re||re.length===0||re[0]===void 0?(re[0]=(V[0]+V[2]+V[4])/3,re[1]=(V[1]+V[3]+V[5])/3,re[2]=(V[0]+V[2]+V[4])/3+1,re[3]=(V[1]+V[3]+V[5])/3+1):(re[2]=(V[0]+V[2]+V[4])/3,re[3]=(V[1]+V[3]+V[5])/3),t.redrawHint("select",!0),t.redraw();else if(de&&W.touches[1]&&!t.touchData.didSelect&&oe.zoomingEnabled()&&oe.panningEnabled()&&oe.userZoomingEnabled()&&oe.userPanningEnabled()){W.preventDefault(),t.data.bgActivePosistion=void 0,t.redrawHint("select",!0);var yt=t.dragData.touchDragEles;if(yt){t.redrawHint("drag",!0);for(var nt=0;nt0&&!t.hoverData.draggingEles&&!t.swipePanning&&t.data.bgActivePosistion!=null&&(t.data.bgActivePosistion=void 0,t.redrawHint("select",!0),t.redraw())}},"touchmoveHandler"),!1);var se;t.registerBinding(e,"touchcancel",se=o(function(W){var de=t.touchData.start;t.touchData.capture=!1,de&&de.unactivate()},"touchcancelHandler"));var ue,Z,Se,ce;if(t.registerBinding(e,"touchend",ue=o(function(W){var de=t.touchData.start,re=t.touchData.capture;if(re)W.touches.length===0&&(t.touchData.capture=!1),W.preventDefault();else return;var oe=t.selection;t.swipePanning=!1,t.hoverData.draggingEles=!1;var V=t.cy,xe=V.zoom(),q=t.touchData.now,pe=t.touchData.earlier;if(W.touches[0]){var ve=t.projectIntoViewport(W.touches[0].clientX,W.touches[0].clientY);q[0]=ve[0],q[1]=ve[1]}if(W.touches[1]){var ve=t.projectIntoViewport(W.touches[1].clientX,W.touches[1].clientY);q[2]=ve[0],q[3]=ve[1]}if(W.touches[2]){var ve=t.projectIntoViewport(W.touches[2].clientX,W.touches[2].clientY);q[4]=ve[0],q[5]=ve[1]}de&&de.unactivate();var Pe;if(t.touchData.cxt){if(Pe={originalEvent:W,type:"cxttapend",position:{x:q[0],y:q[1]}},de?de.emit(Pe):V.emit(Pe),!t.touchData.cxtDragged){var _e={originalEvent:W,type:"cxttap",position:{x:q[0],y:q[1]}};de?de.emit(_e):V.emit(_e)}t.touchData.start&&(t.touchData.start._private.grabbed=!1),t.touchData.cxt=!1,t.touchData.start=null,t.redraw();return}if(!W.touches[2]&&V.boxSelectionEnabled()&&t.touchData.selecting){t.touchData.selecting=!1;var we=V.collection(t.getAllInBox(oe[0],oe[1],oe[2],oe[3]));oe[0]=void 0,oe[1]=void 0,oe[2]=void 0,oe[3]=void 0,oe[4]=0,t.redrawHint("select",!0),V.emit({type:"boxend",originalEvent:W,position:{x:q[0],y:q[1]}});var Ve=o(function(Mt){return Mt.selectable()&&!Mt.selected()},"eleWouldBeSelected");we.emit("box").stdFilter(Ve).select().emit("boxselect"),we.nonempty()&&t.redrawHint("eles",!0),t.redraw()}if(de?.unactivate(),W.touches[2])t.data.bgActivePosistion=void 0,t.redrawHint("select",!0);else if(!W.touches[1]){if(!W.touches[0]){if(!W.touches[0]){t.data.bgActivePosistion=void 0,t.redrawHint("select",!0);var De=t.dragData.touchDragEles;if(de!=null){var qe=de._private.grabbed;x(De),t.redrawHint("drag",!0),t.redrawHint("eles",!0),qe&&(de.emit("freeon"),De.emit("free"),t.dragData.didDrag&&(de.emit("dragfreeon"),De.emit("dragfree"))),i(de,["touchend","tapend","vmouseup","tapdragout"],W,{x:q[0],y:q[1]}),de.unactivate(),t.touchData.start=null}else{var at=t.findNearestElement(q[0],q[1],!0,!0);i(at,["touchend","tapend","vmouseup","tapdragout"],W,{x:q[0],y:q[1]})}var Rt=t.touchData.startPosition[0]-q[0],st=Rt*Rt,Ue=t.touchData.startPosition[1]-q[1],ct=Ue*Ue,We=st+ct,ot=We*xe*xe;t.touchData.singleTouchMoved||(de||V.$(":selected").unselect(["tapunselect"]),i(de,["tap","vclick"],W,{x:q[0],y:q[1]}),Z=!1,W.timeStamp-ce<=V.multiClickDebounceTime()?(Se&&clearTimeout(Se),Z=!0,ce=null,i(de,["dbltap","vdblclick"],W,{x:q[0],y:q[1]})):(Se=setTimeout(function(){Z||i(de,["onetap","voneclick"],W,{x:q[0],y:q[1]})},V.multiClickDebounceTime()),ce=W.timeStamp)),de!=null&&!t.dragData.didDrag&&de._private.selectable&&ot"u"){var ae=[],Oe=o(function(W){return{clientX:W.clientX,clientY:W.clientY,force:1,identifier:W.pointerId,pageX:W.pageX,pageY:W.pageY,radiusX:W.width/2,radiusY:W.height/2,screenX:W.screenX,screenY:W.screenY,target:W.target}},"makeTouch"),ge=o(function(W){return{event:W,touch:Oe(W)}},"makePointer"),ze=o(function(W){ae.push(ge(W))},"addPointer"),He=o(function(W){for(var de=0;de0)return H[0]}return null},"getCurveT"),g=Object.keys(p),y=0;y0?m:vme(a,s,e,r,n,i,l,u)},"intersectLine"),checkPoint:o(function(e,r,n,i,a,s,l,u){u=u==="auto"?Vp(i,a):u;var h=2*u;if(Zu(e,r,this.points,s,l,i,a-h,[0,-1],n)||Zu(e,r,this.points,s,l,i-h,a,[0,-1],n))return!0;var f=i/2+2*n,d=a/2+2*n,p=[s-f,l-d,s-f,l,s+f,l,s+f,l-d];return!!(Us(e,r,p)||$p(e,r,h,h,s+i/2-u,l+a/2-u,n)||$p(e,r,h,h,s-i/2+u,l+a/2-u,n))},"checkPoint")}};eh.registerNodeShapes=function(){var t=this.nodeShapes={},e=this;this.generateEllipse(),this.generatePolygon("triangle",gs(3,0)),this.generateRoundPolygon("round-triangle",gs(3,0)),this.generatePolygon("rectangle",gs(4,0)),t.square=t.rectangle,this.generateRoundRectangle(),this.generateCutRectangle(),this.generateBarrel(),this.generateBottomRoundrectangle();{var r=[0,1,1,0,0,-1,-1,0];this.generatePolygon("diamond",r),this.generateRoundPolygon("round-diamond",r)}this.generatePolygon("pentagon",gs(5,0)),this.generateRoundPolygon("round-pentagon",gs(5,0)),this.generatePolygon("hexagon",gs(6,0)),this.generateRoundPolygon("round-hexagon",gs(6,0)),this.generatePolygon("heptagon",gs(7,0)),this.generateRoundPolygon("round-heptagon",gs(7,0)),this.generatePolygon("octagon",gs(8,0)),this.generateRoundPolygon("round-octagon",gs(8,0));var n=new Array(20);{var i=PP(5,0),a=PP(5,Math.PI/5),s=.5*(3-Math.sqrt(5));s*=1.57;for(var l=0;l=e.deqFastCost*C)break}else if(h){if(b>=e.deqCost*m||b>=e.deqAvgCost*p)break}else if(w>=e.deqNoDrawCost*DP)break;var T=e.deq(n,v,y);if(T.length>0)for(var E=0;E0&&(e.onDeqd(n,g),!h&&e.shouldRedraw(n,g,v,y)&&a())},"dequeue"),l=e.priority||rB;i.beforeRender(s,l(n))}},"setupDequeueingImpl")},"setupDequeueing")},RQe=function(){function t(e){var r=arguments.length>1&&arguments[1]!==void 0?arguments[1]:bS;Mf(this,t),this.idsByKey=new Xc,this.keyForId=new Xc,this.cachesByLvl=new Xc,this.lvls=[],this.getKey=e,this.doesEleInvalidateKey=r}return o(t,"ElementTextureCacheLookup"),If(t,[{key:"getIdsFor",value:o(function(r){r==null&&ai("Can not get id list for null key");var n=this.idsByKey,i=this.idsByKey.get(r);return i||(i=new J1,n.set(r,i)),i},"getIdsFor")},{key:"addIdForKey",value:o(function(r,n){r!=null&&this.getIdsFor(r).add(n)},"addIdForKey")},{key:"deleteIdForKey",value:o(function(r,n){r!=null&&this.getIdsFor(r).delete(n)},"deleteIdForKey")},{key:"getNumberOfIdsForKey",value:o(function(r){return r==null?0:this.getIdsFor(r).size},"getNumberOfIdsForKey")},{key:"updateKeyMappingFor",value:o(function(r){var n=r.id(),i=this.keyForId.get(n),a=this.getKey(r);this.deleteIdForKey(i,n),this.addIdForKey(a,n),this.keyForId.set(n,a)},"updateKeyMappingFor")},{key:"deleteKeyMappingFor",value:o(function(r){var n=r.id(),i=this.keyForId.get(n);this.deleteIdForKey(i,n),this.keyForId.delete(n)},"deleteKeyMappingFor")},{key:"keyHasChangedFor",value:o(function(r){var n=r.id(),i=this.keyForId.get(n),a=this.getKey(r);return i!==a},"keyHasChangedFor")},{key:"isInvalid",value:o(function(r){return this.keyHasChangedFor(r)||this.doesEleInvalidateKey(r)},"isInvalid")},{key:"getCachesAt",value:o(function(r){var n=this.cachesByLvl,i=this.lvls,a=n.get(r);return a||(a=new Xc,n.set(r,a),i.push(r)),a},"getCachesAt")},{key:"getCache",value:o(function(r,n){return this.getCachesAt(n).get(r)},"getCache")},{key:"get",value:o(function(r,n){var i=this.getKey(r),a=this.getCache(i,n);return a!=null&&this.updateKeyMappingFor(r),a},"get")},{key:"getForCachedKey",value:o(function(r,n){var i=this.keyForId.get(r.id()),a=this.getCache(i,n);return a},"getForCachedKey")},{key:"hasCache",value:o(function(r,n){return this.getCachesAt(n).has(r)},"hasCache")},{key:"has",value:o(function(r,n){var i=this.getKey(r);return this.hasCache(i,n)},"has")},{key:"setCache",value:o(function(r,n,i){i.key=r,this.getCachesAt(n).set(r,i)},"setCache")},{key:"set",value:o(function(r,n,i){var a=this.getKey(r);this.setCache(a,n,i),this.updateKeyMappingFor(r)},"set")},{key:"deleteCache",value:o(function(r,n){this.getCachesAt(n).delete(r)},"deleteCache")},{key:"delete",value:o(function(r,n){var i=this.getKey(r);this.deleteCache(i,n)},"_delete")},{key:"invalidateKey",value:o(function(r){var n=this;this.lvls.forEach(function(i){return n.deleteCache(r,i)})},"invalidateKey")},{key:"invalidate",value:o(function(r){var n=r.id(),i=this.keyForId.get(n);this.deleteKeyMappingFor(r);var a=this.doesEleInvalidateKey(r);return a&&this.invalidateKey(i),a||this.getNumberOfIdsForKey(i)===0},"invalidate")}]),t}(),I0e=25,sS=50,yS=-4,XP=3,bge=7.99,NQe=8,MQe=1024,IQe=1024,OQe=1024,PQe=.2,BQe=.8,FQe=10,$Qe=.15,zQe=.1,GQe=.9,VQe=.9,UQe=100,HQe=1,H1={dequeue:"dequeue",downscale:"downscale",highQuality:"highQuality"},WQe=la({getKey:null,doesEleInvalidateKey:bS,drawElement:null,getBoundingBox:null,getRotationPoint:null,getRotationOffset:null,isVisible:ume,allowEdgeTxrCaching:!0,allowParentTxrCaching:!0}),Fb=o(function(e,r){var n=this;n.renderer=e,n.onDequeues=[];var i=WQe(r);rr(n,i),n.lookup=new RQe(i.getKey,i.doesEleInvalidateKey),n.setupDequeueing()},"ElementTextureCache"),qi=Fb.prototype;qi.reasons=H1;qi.getTextureQueue=function(t){var e=this;return e.eleImgCaches=e.eleImgCaches||{},e.eleImgCaches[t]=e.eleImgCaches[t]||[]};qi.getRetiredTextureQueue=function(t){var e=this,r=e.eleImgCaches.retired=e.eleImgCaches.retired||{},n=r[t]=r[t]||[];return n};qi.getElementQueue=function(){var t=this,e=t.eleCacheQueue=t.eleCacheQueue||new i4(function(r,n){return n.reqs-r.reqs});return e};qi.getElementKeyToQueue=function(){var t=this,e=t.eleKeyToCacheQueue=t.eleKeyToCacheQueue||{};return e};qi.getElement=function(t,e,r,n,i){var a=this,s=this.renderer,l=s.cy.zoom(),u=this.lookup;if(!e||e.w===0||e.h===0||isNaN(e.w)||isNaN(e.h)||!t.visible()||t.removed()||!a.allowEdgeTxrCaching&&t.isEdge()||!a.allowParentTxrCaching&&t.isParent())return null;if(n==null&&(n=Math.ceil(iB(l*r))),n=bge||n>XP)return null;var h=Math.pow(2,n),f=e.h*h,d=e.w*h,p=s.eleTextBiggerThanMin(t,h);if(!this.isVisible(t,p))return null;var m=u.get(t,n);if(m&&m.invalidated&&(m.invalidated=!1,m.texture.invalidatedWidth-=m.width),m)return m;var g;if(f<=I0e?g=I0e:f<=sS?g=sS:g=Math.ceil(f/sS)*sS,f>OQe||d>IQe)return null;var y=a.getTextureQueue(g),v=y[y.length-2],x=o(function(){return a.recycleTexture(g,d)||a.addTexture(g,d)},"addNewTxr");v||(v=y[y.length-1]),v||(v=x()),v.width-v.usedWidthn;D--)_=a.getElement(t,e,r,D,H1.downscale);I()}else return a.queueElement(t,E.level-1),E;else{var k;if(!w&&!C&&!T)for(var L=n-1;L>=yS;L--){var R=u.get(t,L);if(R){k=R;break}}if(b(k))return a.queueElement(t,n),k;v.context.translate(v.usedWidth,0),v.context.scale(h,h),this.drawElement(v.context,t,e,p,!1),v.context.scale(1/h,1/h),v.context.translate(-v.usedWidth,0)}return m={x:v.usedWidth,texture:v,level:n,scale:h,width:d,height:f,scaledLabelShown:p},v.usedWidth+=Math.ceil(d+NQe),v.eleCaches.push(m),u.set(t,n,m),a.checkTextureFullness(v),m};qi.invalidateElements=function(t){for(var e=0;e=PQe*t.width&&this.retireTexture(t)};qi.checkTextureFullness=function(t){var e=this,r=e.getTextureQueue(t.height);t.usedWidth/t.width>BQe&&t.fullnessChecks>=FQe?Df(r,t):t.fullnessChecks++};qi.retireTexture=function(t){var e=this,r=t.height,n=e.getTextureQueue(r),i=this.lookup;Df(n,t),t.retired=!0;for(var a=t.eleCaches,s=0;s=e)return s.retired=!1,s.usedWidth=0,s.invalidatedWidth=0,s.fullnessChecks=0,nB(s.eleCaches),s.context.setTransform(1,0,0,1,0,0),s.context.clearRect(0,0,s.width,s.height),Df(i,s),n.push(s),s}};qi.queueElement=function(t,e){var r=this,n=r.getElementQueue(),i=r.getElementKeyToQueue(),a=this.getKey(t),s=i[a];if(s)s.level=Math.max(s.level,e),s.eles.merge(t),s.reqs++,n.updateItem(s);else{var l={eles:t.spawn().merge(t),level:e,reqs:1,key:a};n.push(l),i[a]=l}};qi.dequeue=function(t){for(var e=this,r=e.getElementQueue(),n=e.getElementKeyToQueue(),i=[],a=e.lookup,s=0;s0;s++){var l=r.pop(),u=l.key,h=l.eles[0],f=a.hasCache(h,l.level);if(n[u]=null,f)continue;i.push(l);var d=e.getBoundingBox(h);e.getElement(h,d,t,l.level,H1.dequeue)}return i};qi.removeFromQueue=function(t){var e=this,r=e.getElementQueue(),n=e.getElementKeyToQueue(),i=this.getKey(t),a=n[i];a!=null&&(a.eles.length===1?(a.reqs=tB,r.updateItem(a),r.pop(),n[i]=null):a.eles.unmerge(t))};qi.onDequeue=function(t){this.onDequeues.push(t)};qi.offDequeue=function(t){Df(this.onDequeues,t)};qi.setupDequeueing=xge.setupDequeueing({deqRedrawThreshold:UQe,deqCost:$Qe,deqAvgCost:zQe,deqNoDrawCost:GQe,deqFastCost:VQe,deq:o(function(e,r,n){return e.dequeue(r,n)},"deq"),onDeqd:o(function(e,r){for(var n=0;n=YQe||r>_S)return null}n.validateLayersElesOrdering(r,t);var u=n.layersByLevel,h=Math.pow(2,r),f=u[r]=u[r]||[],d,p=n.levelIsComplete(r,t),m,g=o(function(){var I=o(function(O){if(n.validateLayersElesOrdering(O,t),n.levelIsComplete(O,t))return m=u[O],!0},"canUseAsTmpLvl"),D=o(function(O){if(!m)for(var M=r+O;zb<=M&&M<=_S&&!I(M);M+=O);},"checkLvls");D(1),D(-1);for(var k=f.length-1;k>=0;k--){var L=f[k];L.invalid&&Df(f,L)}},"checkTempLevels");if(!p)g();else return f;var y=o(function(){if(!d){d=Hs();for(var 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m=n.padding();a=n.width()+2*m,s=n.height()+2*m}l.colorFillStyle(r,f[0],f[1],f[2],h),l.nodeShapes[d].draw(r,i.x,i.y,a+u*2,s+u*2,p),r.fill()}}}},"drawNodeOverlayUnderlay");ly.drawNodeOverlay=Ege("overlay");ly.drawNodeUnderlay=Ege("underlay");ly.hasPie=function(t){return t=t[0],t._private.hasPie};ly.drawPie=function(t,e,r,n){e=e[0],n=n||e.position();var i=e.cy().style(),a=e.pstyle("pie-size"),s=n.x,l=n.y,u=e.width(),h=e.height(),f=Math.min(u,h)/2,d=0,p=this.usePaths();p&&(s=0,l=0),a.units==="%"?f=f*a.pfValue:a.pfValue!==void 0&&(f=a.pfValue/2);for(var m=1;m<=i.pieBackgroundN;m++){var g=e.pstyle("pie-"+m+"-background-size").value,y=e.pstyle("pie-"+m+"-background-color").value,v=e.pstyle("pie-"+m+"-background-opacity").value*r,x=g/100;x+d>1&&(x=1-d);var b=1.5*Math.PI+2*Math.PI*d,w=2*Math.PI*x,C=b+w;g===0||d>=1||d+x>1||(t.beginPath(),t.moveTo(s,l),t.arc(s,l,f,b,C),t.closePath(),this.colorFillStyle(t,y[0],y[1],y[2],v),t.fill(),d+=x)}};ys={},dZe=100;ys.getPixelRatio=function(){var t=this.data.contexts[0];if(this.forcedPixelRatio!=null)return this.forcedPixelRatio;var e=this.cy.window(),r=t.backingStorePixelRatio||t.webkitBackingStorePixelRatio||t.mozBackingStorePixelRatio||t.msBackingStorePixelRatio||t.oBackingStorePixelRatio||t.backingStorePixelRatio||1;return(e.devicePixelRatio||1)/r};ys.paintCache=function(t){for(var e=this.paintCaches=this.paintCaches||[],r=!0,n,i=0;ie.minMbLowQualFrames&&(e.motionBlurPxRatio=e.mbPxRBlurry)),e.clearingMotionBlur&&(e.motionBlurPxRatio=1),e.textureDrawLastFrame&&!d&&(f[e.NODE]=!0,f[e.SELECT_BOX]=!0);var b=r.style(),w=r.zoom(),C=s!==void 0?s:w,T=r.pan(),E={x:T.x,y:T.y},A={zoom:w,pan:{x:T.x,y:T.y}},S=e.prevViewport,_=S===void 0||A.zoom!==S.zoom||A.pan.x!==S.pan.x||A.pan.y!==S.pan.y;!_&&!(y&&!g)&&(e.motionBlurPxRatio=1),l&&(E=l),C*=u,E.x*=u,E.y*=u;var I=e.getCachedZSortedEles();function D(K,X,te,J,se){var ue=K.globalCompositeOperation;K.globalCompositeOperation="destination-out",e.colorFillStyle(K,255,255,255,e.motionBlurTransparency),K.fillRect(X,te,J,se),K.globalCompositeOperation=ue}o(D,"mbclear");function k(K,X){var te,J,se,ue;!e.clearingMotionBlur&&(K===h.bufferContexts[e.MOTIONBLUR_BUFFER_NODE]||K===h.bufferContexts[e.MOTIONBLUR_BUFFER_DRAG])?(te={x:T.x*m,y:T.y*m},J=w*m,se=e.canvasWidth*m,ue=e.canvasHeight*m):(te=E,J=C,se=e.canvasWidth,ue=e.canvasHeight),K.setTransform(1,0,0,1,0,0),X==="motionBlur"?D(K,0,0,se,ue):!n&&(X===void 0||X)&&K.clearRect(0,0,se,ue),i||(K.translate(te.x,te.y),K.scale(J,J)),l&&K.translate(l.x,l.y),s&&K.scale(s,s)}if(o(k,"setContextTransform"),d||(e.textureDrawLastFrame=!1),d){if(e.textureDrawLastFrame=!0,!e.textureCache){e.textureCache={},e.textureCache.bb=r.mutableElements().boundingBox(),e.textureCache.texture=e.data.bufferCanvases[e.TEXTURE_BUFFER];var L=e.data.bufferContexts[e.TEXTURE_BUFFER];L.setTransform(1,0,0,1,0,0),L.clearRect(0,0,e.canvasWidth*e.textureMult,e.canvasHeight*e.textureMult),e.render({forcedContext:L,drawOnlyNodeLayer:!0,forcedPxRatio:u*e.textureMult});var A=e.textureCache.viewport={zoom:r.zoom(),pan:r.pan(),width:e.canvasWidth,height:e.canvasHeight};A.mpan={x:(0-A.pan.x)/A.zoom,y:(0-A.pan.y)/A.zoom}}f[e.DRAG]=!1,f[e.NODE]=!1;var R=h.contexts[e.NODE],O=e.textureCache.texture,A=e.textureCache.viewport;R.setTransform(1,0,0,1,0,0),p?D(R,0,0,A.width,A.height):R.clearRect(0,0,A.width,A.height);var M=b.core("outside-texture-bg-color").value,B=b.core("outside-texture-bg-opacity").value;e.colorFillStyle(R,M[0],M[1],M[2],B),R.fillRect(0,0,A.width,A.height);var w=r.zoom();k(R,!1),R.clearRect(A.mpan.x,A.mpan.y,A.width/A.zoom/u,A.height/A.zoom/u),R.drawImage(O,A.mpan.x,A.mpan.y,A.width/A.zoom/u,A.height/A.zoom/u)}else e.textureOnViewport&&!n&&(e.textureCache=null);var F=r.extent(),P=e.pinching||e.hoverData.dragging||e.swipePanning||e.data.wheelZooming||e.hoverData.draggingEles||e.cy.animated(),z=e.hideEdgesOnViewport&&P,$=[];if($[e.NODE]=!f[e.NODE]&&p&&!e.clearedForMotionBlur[e.NODE]||e.clearingMotionBlur,$[e.NODE]&&(e.clearedForMotionBlur[e.NODE]=!0),$[e.DRAG]=!f[e.DRAG]&&p&&!e.clearedForMotionBlur[e.DRAG]||e.clearingMotionBlur,$[e.DRAG]&&(e.clearedForMotionBlur[e.DRAG]=!0),f[e.NODE]||i||a||$[e.NODE]){var H=p&&!$[e.NODE]&&m!==1,R=n||(H?e.data.bufferContexts[e.MOTIONBLUR_BUFFER_NODE]:h.contexts[e.NODE]),Q=p&&!H?"motionBlur":void 0;k(R,Q),z?e.drawCachedNodes(R,I.nondrag,u,F):e.drawLayeredElements(R,I.nondrag,u,F),e.debug&&e.drawDebugPoints(R,I.nondrag),!i&&!p&&(f[e.NODE]=!1)}if(!a&&(f[e.DRAG]||i||$[e.DRAG])){var H=p&&!$[e.DRAG]&&m!==1,R=n||(H?e.data.bufferContexts[e.MOTIONBLUR_BUFFER_DRAG]:h.contexts[e.DRAG]);k(R,p&&!H?"motionBlur":void 0),z?e.drawCachedNodes(R,I.drag,u,F):e.drawCachedElements(R,I.drag,u,F),e.debug&&e.drawDebugPoints(R,I.drag),!i&&!p&&(f[e.DRAG]=!1)}if(this.drawSelectionRectangle(t,k),p&&m!==1){var j=h.contexts[e.NODE],ie=e.data.bufferCanvases[e.MOTIONBLUR_BUFFER_NODE],ne=h.contexts[e.DRAG],le=e.data.bufferCanvases[e.MOTIONBLUR_BUFFER_DRAG],he=o(function(X,te,J){X.setTransform(1,0,0,1,0,0),J||!x?X.clearRect(0,0,e.canvasWidth,e.canvasHeight):D(X,0,0,e.canvasWidth,e.canvasHeight);var se=m;X.drawImage(te,0,0,e.canvasWidth*se,e.canvasHeight*se,0,0,e.canvasWidth,e.canvasHeight)},"drawMotionBlur");(f[e.NODE]||$[e.NODE])&&(he(j,ie,$[e.NODE]),f[e.NODE]=!1),(f[e.DRAG]||$[e.DRAG])&&(he(ne,le,$[e.DRAG]),f[e.DRAG]=!1)}e.prevViewport=A,e.clearingMotionBlur&&(e.clearingMotionBlur=!1,e.motionBlurCleared=!0,e.motionBlur=!0),p&&(e.motionBlurTimeout=setTimeout(function(){e.motionBlurTimeout=null,e.clearedForMotionBlur[e.NODE]=!1,e.clearedForMotionBlur[e.DRAG]=!1,e.motionBlur=!1,e.clearingMotionBlur=!d,e.mbFrames=0,f[e.NODE]=!0,f[e.DRAG]=!0,e.redraw()},dZe)),n||r.emit("render")};ys.drawSelectionRectangle=function(t,e){var r=this,n=r.cy,i=r.data,a=n.style(),s=t.drawOnlyNodeLayer,l=t.drawAllLayers,u=i.canvasNeedsRedraw,h=t.forcedContext;if(r.showFps||!s&&u[r.SELECT_BOX]&&!l){var f=h||i.contexts[r.SELECT_BOX];if(e(f),r.selection[4]==1&&(r.hoverData.selecting||r.touchData.selecting)){var d=r.cy.zoom(),p=a.core("selection-box-border-width").value/d;f.lineWidth=p,f.fillStyle="rgba("+a.core("selection-box-color").value[0]+","+a.core("selection-box-color").value[1]+","+a.core("selection-box-color").value[2]+","+a.core("selection-box-opacity").value+")",f.fillRect(r.selection[0],r.selection[1],r.selection[2]-r.selection[0],r.selection[3]-r.selection[1]),p>0&&(f.strokeStyle="rgba("+a.core("selection-box-border-color").value[0]+","+a.core("selection-box-border-color").value[1]+","+a.core("selection-box-border-color").value[2]+","+a.core("selection-box-opacity").value+")",f.strokeRect(r.selection[0],r.selection[1],r.selection[2]-r.selection[0],r.selection[3]-r.selection[1]))}if(i.bgActivePosistion&&!r.hoverData.selecting){var d=r.cy.zoom(),m=i.bgActivePosistion;f.fillStyle="rgba("+a.core("active-bg-color").value[0]+","+a.core("active-bg-color").value[1]+","+a.core("active-bg-color").value[2]+","+a.core("active-bg-opacity").value+")",f.beginPath(),f.arc(m.x,m.y,a.core("active-bg-size").pfValue/d,0,2*Math.PI),f.fill()}var g=r.lastRedrawTime;if(r.showFps&&g){g=Math.round(g);var y=Math.round(1e3/g),v="1 frame = "+g+" ms = "+y+" fps";if(f.setTransform(1,0,0,1,0,0),f.fillStyle="rgba(255, 0, 0, 0.75)",f.strokeStyle="rgba(255, 0, 0, 0.75)",f.font="30px Arial",!Nb){var x=f.measureText(v);Nb=x.actualBoundingBoxAscent}f.fillText(v,0,Nb);var b=60;f.strokeRect(0,Nb+10,250,20),f.fillRect(0,Nb+10,250*Math.min(y/b,1),20)}l||(u[r.SELECT_BOX]=!1)}};o(z0e,"compileShader");o(pZe,"createProgram");o(mZe,"createTextureCanvas");o(wB,"getEffectivePanZoom");o(NP,"modelToRenderedPosition");o(oS,"toWebGLColor");o(lS,"indexToVec4");o(gZe,"vec4ToIndex");o(yZe,"createTexture");o(Sge,"getTypeInfo");o(Cge,"createTypedArray");o(vZe,"createTypedArrayView");o(xZe,"createBufferStaticDraw");o(po,"createBufferDynamicDraw");o(bZe,"createPickingFrameBuffer");G0e=typeof Float32Array<"u"?Float32Array:Array;Math.hypot||(Math.hypot=function(){for(var t=0,e=arguments.length;e--;)t+=arguments[e]*arguments[e];return Math.sqrt(t)});o(Gb,"create");o(Age,"identity");o(wZe,"multiply");o(DS,"translate");o(_ge,"rotate");o(TB,"scale");o(TZe,"projection");Vb={SCREEN:{name:"screen",screen:!0},PICKING:{name:"picking",picking:!0}},Mb=la({getKey:null,drawElement:null,getBoundingBox:null,getRotation:null,getRotationPoint:null,getRotationOffset:null,isVisible:null,getPadding:null}),kZe=function(){function t(e,r){Mf(this,t),this.debugID=Math.floor(Math.random()*1e4),this.r=e,this.atlasSize=r.webglTexSize,this.rows=r.webglTexRows,this.enableWrapping=r.enableWrapping,this.texHeight=Math.floor(this.atlasSize/this.rows),this.maxTexWidth=this.atlasSize,this.texture=null,this.canvas=null,this.needsBuffer=!0,this.freePointer={x:0,row:0},this.keyToLocation=new Map,this.canvas=r.createTextureCanvas(e,this.atlasSize,this.atlasSize),this.scratch=r.createTextureCanvas(e,this.atlasSize,this.texHeight,"scratch")}return o(t,"Atlas"),If(t,[{key:"getKeys",value:o(function(){return new Set(this.keyToLocation.keys())},"getKeys")},{key:"getScale",value:o(function(r){var n=r.w,i=r.h,a=this.texHeight,s=this.maxTexWidth,l=a/i,u=n*l,h=i*l;return u>s&&(l=s/n,u=n*l,h=i*l),{scale:l,texW:u,texH:h}},"getScale")},{key:"draw",value:o(function(r,n,i){var a=this,s=this.atlasSize,l=this.rows,u=this.texHeight,h=this.getScale(n),f=h.scale,d=h.texW,p=h.texH,m=[null,null],g=o(function(w,C){if(i&&C){var T=C.context,E=w.x,A=w.row,S=E,_=u*A;T.save(),T.translate(S,_),T.scale(f,f),i(T,n),T.restore()}},"drawAt"),y=o(function(){g(a.freePointer,a.canvas),m[0]={x:a.freePointer.x,y:a.freePointer.row*u,w:d,h:p},m[1]={x:a.freePointer.x+d,y:a.freePointer.row*u,w:0,h:p},a.freePointer.x+=d,a.freePointer.x==s&&(a.freePointer.x=0,a.freePointer.row++)},"drawNormal"),v=o(function(){var w=a.scratch,C=a.canvas;w.clear(),g({x:0,row:0},w);var T=s-a.freePointer.x,E=d-T,A=u;{var S=a.freePointer.x,_=a.freePointer.row*u,I=T;C.context.drawImage(w,0,0,I,A,S,_,I,A),m[0]={x:S,y:_,w:I,h:p}}{var D=T,k=(a.freePointer.row+1)*u,L=E;C&&C.context.drawImage(w,D,0,L,A,0,k,L,A),m[1]={x:0,y:k,w:L,h:p}}a.freePointer.x=E,a.freePointer.row++},"drawWrapped"),x=o(function(){a.freePointer.x=0,a.freePointer.row++},"moveToStartOfNextRow");if(this.freePointer.x+d<=s)y();else{if(this.freePointer.row>=l-1)return!1;this.freePointer.x===s?(x(),y()):this.enableWrapping?v():(x(),y())}return this.keyToLocation.set(r,m),this.needsBuffer=!0,m},"draw")},{key:"getOffsets",value:o(function(r){return this.keyToLocation.get(r)},"getOffsets")},{key:"isEmpty",value:o(function(){return this.freePointer.x===0&&this.freePointer.row===0},"isEmpty")},{key:"canFit",value:o(function(r){var n=this.atlasSize,i=this.rows,a=this.getScale(r),s=a.texW;return this.freePointer.x+s>n?this.freePointer.row1&&arguments[1]!==void 0?arguments[1]:{},i=n.forceRedraw,a=i===void 0?!1:i,s=n.filterEle,l=s===void 0?function(){return!0}:s,u=n.filterType,h=u===void 0?function(){return!0}:u,f=!1,d=mo(r),p;try{for(d.s();!(p=d.n()).done;){var m=p.value;if(l(m)){var g=m.id(),y=mo(this.getRenderTypes()),v;try{for(y.s();!(v=y.n()).done;){var x=v.value;if(h(x.type)){var b=x.getKey(m);a?(x.atlasCollection.deleteKey(g,b),x.atlasCollection.styleKeyNeedsRedraw.add(b),f=!0):f|=x.atlasCollection.checkKeyIsInvalid(g,b)}}}catch(w){y.e(w)}finally{y.f()}}}}catch(w){d.e(w)}finally{d.f()}return f},"invalidate")},{key:"gc",value:o(function(){var r=mo(this.getRenderTypes()),n;try{for(r.s();!(n=r.n()).done;){var i=n.value;i.atlasCollection.gc()}}catch(a){r.e(a)}finally{r.f()}},"gc")},{key:"isRenderable",value:o(function(r,n){var i=this.getRenderTypeOpts(n);return i&&i.isVisible(r)},"isRenderable")},{key:"startBatch",value:o(function(){this.batchAtlases=[]},"startBatch")},{key:"getAtlasCount",value:o(function(){return this.batchAtlases.length},"getAtlasCount")},{key:"getAtlases",value:o(function(){return this.batchAtlases},"getAtlases")},{key:"getOrCreateAtlas",value:o(function(r,n,i){var a=this.renderTypes.get(i),s=a.getKey(r),l=r.id();return a.atlasCollection.draw(l,s,n,function(u){a.drawElement(u,r,n,!0,!0)})},"getOrCreateAtlas")},{key:"getAtlasIndexForBatch",value:o(function(r){var n=this.batchAtlases.indexOf(r);if(n<0){if(this.batchAtlases.length===this.maxAtlasesPerBatch)return;this.batchAtlases.push(r),n=this.batchAtlases.length-1}return n},"getAtlasIndexForBatch")},{key:"getIndexArray",value:o(function(){return Array.from({length:this.maxAtlases},function(r,n){return n})},"getIndexArray")},{key:"getAtlasInfo",value:o(function(r,n){var i=this.renderTypes.get(n),a=i.getBoundingBox(r),s=this.getOrCreateAtlas(r,a,n),l=this.getAtlasIndexForBatch(s);if(l!==void 0){var u=i.getKey(r),h=s.getOffsets(u),f=_i(h,2),d=f[0],p=f[1];return{atlasID:l,tex:d,tex1:d,tex2:p,bb:a,type:n,styleKey:u}}},"getAtlasInfo")},{key:"canAddToCurrentBatch",value:o(function(r,n){if(this.batchAtlases.length===this.maxAtlasesPerBatch){var i=this.renderTypes.get(n),a=i.getKey(r),s=i.atlasCollection.getAtlas(a);return s&&this.batchAtlases.includes(s)}return!0},"canAddToCurrentBatch")},{key:"setTransformMatrix",value:o(function(r,n,i){var a=arguments.length>3&&arguments[3]!==void 0?arguments[3]:!0,s=n.bb,l=n.type,u=n.tex1,h=n.tex2,f=this.getRenderTypeOpts(l),d=f.getPadding?f.getPadding(i):0,p=u.w/(u.w+h.w);a||(p=1-p);var m=this.getAdjustedBB(s,d,a,p),g,y;Age(r);var v=f.getRotation?f.getRotation(i):0;if(v!==0){var x=f.getRotationPoint(i),b=x.x,w=x.y;DS(r,r,[b,w]),_ge(r,r,v);var C=f.getRotationOffset(i);g=C.x+m.xOffset,y=C.y}else g=m.x1,y=m.y1;DS(r,r,[g,y]),TB(r,r,[m.w,m.h])},"setTransformMatrix")},{key:"getTransformMatrix",value:o(function(r,n){var i=arguments.length>2&&arguments[2]!==void 0?arguments[2]:!0,a=Gb();return this.setTransformMatrix(a,r,n,i),a},"getTransformMatrix")},{key:"getAdjustedBB",value:o(function(r,n,i,a){var s=r.x1,l=r.y1,u=r.w,h=r.h;n&&(s-=n,l-=n,u+=2*n,h+=2*n);var f=0,d=u*a;return i&&a<1?u=d:!i&&a<1&&(f=u-d,s+=f,u=d),{x1:s,y1:l,w:u,h,xOffset:f}},"getAdjustedBB")},{key:"getDebugInfo",value:o(function(){var r=[],n=mo(this.renderTypes),i;try{for(n.s();!(i=n.n()).done;){var a=_i(i.value,2),s=a[0],l=a[1],u=l.atlasCollection.getCounts(),h=u.keyCount,f=u.atlasCount;r.push({type:s,keyCount:h,atlasCount:f})}}catch(d){n.e(d)}finally{n.f()}return r},"getDebugInfo")}]),t}(),MP=0,V0e=1,U0e=2,IP=3,AZe=function(){function t(e,r,n){Mf(this,t),this.r=e,this.gl=r,this.maxInstances=n.webglBatchSize,this.maxAtlases=n.webglTexPerBatch,this.atlasSize=n.webglTexSize,this.bgColor=n.bgColor,n.enableWrapping=!0,n.createTextureCanvas=mZe,this.atlasManager=new CZe(e,n),this.program=this.createShaderProgram(Vb.SCREEN),this.pickingProgram=this.createShaderProgram(Vb.PICKING),this.vao=this.createVAO(),this.debugInfo=[]}return o(t,"ElementDrawingWebGL"),If(t,[{key:"addTextureRenderType",value:o(function(r,n){this.atlasManager.addRenderType(r,n)},"addTextureRenderType")},{key:"invalidate",value:o(function(r){var n=arguments.length>1&&arguments[1]!==void 0?arguments[1]:{},i=n.type,a=this.atlasManager;return i?a.invalidate(r,{filterType:o(function(l){return l===i},"filterType"),forceRedraw:!0}):a.invalidate(r)},"invalidate")},{key:"gc",value:o(function(){this.atlasManager.gc()},"gc")},{key:"createShaderProgram",value:o(function(r){var n=this.gl,i=`#version 300 es + precision highp float; + + uniform mat3 uPanZoomMatrix; + uniform int uAtlasSize; + + // instanced + in vec2 aPosition; + + // what are we rendering? + in int aVertType; + + // for picking + in vec4 aIndex; + + // For textures + in int aAtlasId; // which shader unit/atlas to use + in vec4 aTex1; // x/y/w/h of texture in atlas + in vec4 aTex2; + + // for any transforms that are needed + in vec4 aScaleRotate1; // vectors use fewer attributes than matrices + in vec2 aTranslate1; + in vec4 aScaleRotate2; + in vec2 aTranslate2; + + // for edges + in vec4 aPointAPointB; + in vec4 aPointCPointD; + in float aLineWidth; + in vec4 aEdgeColor; + + out vec2 vTexCoord; + out vec4 vEdgeColor; + flat out int vAtlasId; + flat out vec4 vIndex; + flat out int vVertType; + + void main(void) { + int vid = gl_VertexID; + vec2 position = aPosition; + + if(aVertType == `.concat(MP,`) { + float texX; + float texY; + float texW; + float texH; + mat3 texMatrix; + + int vid = gl_VertexID; + if(vid <= 5) { + texX = aTex1.x; + texY = aTex1.y; + texW = aTex1.z; + texH = aTex1.w; + texMatrix = mat3( + vec3(aScaleRotate1.xy, 0.0), + vec3(aScaleRotate2.zw, 0.0), + vec3(aTranslate1, 1.0) + ); + } else { + texX = aTex2.x; + texY = aTex2.y; + texW = aTex2.z; + texH = aTex2.w; + texMatrix = mat3( + vec3(aScaleRotate2.xy, 0.0), + vec3(aScaleRotate2.zw, 0.0), + vec3(aTranslate2, 1.0) + ); + } + + if(vid == 1 || vid == 2 || vid == 4 || vid == 7 || vid == 8 || vid == 10) { + texX += texW; + } + if(vid == 2 || vid == 4 || vid == 5 || vid == 8 || vid == 10 || vid == 11) { + texY += texH; + } + + float d = float(uAtlasSize); + vTexCoord = vec2(texX / d, texY / d); // tex coords must be between 0 and 1 + + gl_Position = vec4(uPanZoomMatrix * texMatrix * vec3(position, 1.0), 1.0); + } + else if(aVertType == `).concat(V0e,` && vid < 6) { + vec2 source = aPointAPointB.xy; + vec2 target = aPointAPointB.zw; + + // adjust the geometry so that the line is centered on the edge + position.y = position.y - 0.5; + + vec2 xBasis = target - source; + vec2 yBasis = normalize(vec2(-xBasis.y, xBasis.x)); + vec2 point = source + xBasis * position.x + yBasis * aLineWidth * position.y; + + gl_Position = vec4(uPanZoomMatrix * vec3(point, 1.0), 1.0); + vEdgeColor = aEdgeColor; + } + else if(aVertType == `).concat(U0e,` && vid < 6) { + vec2 pointA = aPointAPointB.xy; + vec2 pointB = aPointAPointB.zw; + vec2 pointC = aPointCPointD.xy; + vec2 pointD = aPointCPointD.zw; + + // adjust the geometry so that the line is centered on the edge + position.y = position.y - 0.5; + + vec2 p0 = pointA; + vec2 p1 = pointB; + vec2 p2 = pointC; + vec2 pos = position; + if(position.x == 1.0) { + p0 = pointD; + p1 = pointC; + p2 = pointB; + pos = vec2(0.0, -position.y); + } + + vec2 p01 = p1 - p0; + vec2 p12 = p2 - p1; + vec2 p21 = p1 - p2; + + // Find the normal vector. + vec2 tangent = normalize(normalize(p12) + normalize(p01)); + vec2 normal = vec2(-tangent.y, tangent.x); + + // Find the vector perpendicular to p0 -> p1. + vec2 p01Norm = normalize(vec2(-p01.y, p01.x)); + + // Determine the bend direction. + float sigma = sign(dot(p01 + p21, normal)); + float width = aLineWidth; + + if(sign(pos.y) == -sigma) { + // This is an intersecting vertex. Adjust the position so that there's no overlap. + vec2 point = 0.5 * width * normal * -sigma / dot(normal, p01Norm); + gl_Position = vec4(uPanZoomMatrix * vec3(p1 + point, 1.0), 1.0); + } else { + // This is a non-intersecting vertex. Treat it like a mitre join. + vec2 point = 0.5 * width * normal * sigma * dot(normal, p01Norm); + gl_Position = vec4(uPanZoomMatrix * vec3(p1 + point, 1.0), 1.0); + } + + vEdgeColor = aEdgeColor; + } + else if(aVertType == `).concat(IP,` && vid < 3) { + // massage the first triangle into an edge arrow + if(vid == 0) + position = vec2(-0.15, -0.3); + if(vid == 1) + position = vec2( 0.0, 0.0); + if(vid == 2) + position = vec2( 0.15, -0.3); + + mat3 transform = mat3( + vec3(aScaleRotate1.xy, 0.0), + vec3(aScaleRotate1.zw, 0.0), + vec3(aTranslate1, 1.0) + ); + gl_Position = vec4(uPanZoomMatrix * transform * vec3(position, 1.0), 1.0); + vEdgeColor = aEdgeColor; + } else { + gl_Position = vec4(2.0, 0.0, 0.0, 1.0); // discard vertex by putting it outside webgl clip space + } + + vAtlasId = aAtlasId; + vIndex = aIndex; + vVertType = aVertType; + } + `),a=this.atlasManager.getIndexArray(),s=`#version 300 es + precision highp float; + + // define texture unit for each node in the batch + `.concat(a.map(function(h){return"uniform sampler2D uTexture".concat(h,";")}).join(` + `),` + + uniform vec4 uBGColor; + + in vec2 vTexCoord; + in vec4 vEdgeColor; + flat in int vAtlasId; + flat in vec4 vIndex; + flat in int vVertType; + + out vec4 outColor; + + void main(void) { + if(vVertType == `).concat(MP,`) { + `).concat(a.map(function(h){return"if(vAtlasId == ".concat(h,") outColor = texture(uTexture").concat(h,", vTexCoord);")}).join(` + else `),` + } else if(vVertType == `).concat(IP,`) { + // blend arrow color with background (using premultiplied alpha) + outColor.rgb = vEdgeColor.rgb + (uBGColor.rgb * (1.0 - vEdgeColor.a)); + outColor.a = 1.0; // make opaque, masks out line under arrow + } else { + outColor = vEdgeColor; + } + + `).concat(r.picking?`if(outColor.a == 0.0) discard; + else outColor = vIndex;`:"",` + } + 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s(u,h,f){n.call(this,f),this.isOverlapingSourceAndTarget=!1,this.vGraphObject=f,this.bendpoints=[],this.source=u,this.target=h}o(s,"LEdge"),s.prototype=Object.create(n.prototype);for(var l in n)s[l]=n[l];s.prototype.getSource=function(){return this.source},s.prototype.getTarget=function(){return this.target},s.prototype.isInterGraph=function(){return this.isInterGraph},s.prototype.getLength=function(){return this.length},s.prototype.isOverlapingSourceAndTarget=function(){return this.isOverlapingSourceAndTarget},s.prototype.getBendpoints=function(){return this.bendpoints},s.prototype.getLca=function(){return this.lca},s.prototype.getSourceInLca=function(){return this.sourceInLca},s.prototype.getTargetInLca=function(){return this.targetInLca},s.prototype.getOtherEnd=function(u){if(this.source===u)return this.target;if(this.target===u)return this.source;throw"Node is not incident with this edge"},s.prototype.getOtherEndInGraph=function(u,h){for(var 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strict";function n(i){this.vGraphObject=i}o(n,"LGraphObject"),t.exports=n},function(t,e,r){"use strict";var n=r(2),i=r(10),a=r(13),s=r(0),l=r(16),u=r(4);function h(d,p,m,g){m==null&&g==null&&(g=p),n.call(this,g),d.graphManager!=null&&(d=d.graphManager),this.estimatedSize=i.MIN_VALUE,this.inclusionTreeDepth=i.MAX_VALUE,this.vGraphObject=g,this.edges=[],this.graphManager=d,m!=null&&p!=null?this.rect=new a(p.x,p.y,m.width,m.height):this.rect=new a}o(h,"LNode"),h.prototype=Object.create(n.prototype);for(var f in n)h[f]=n[f];h.prototype.getEdges=function(){return this.edges},h.prototype.getChild=function(){return this.child},h.prototype.getOwner=function(){return this.owner},h.prototype.getWidth=function(){return this.rect.width},h.prototype.setWidth=function(d){this.rect.width=d},h.prototype.getHeight=function(){return this.rect.height},h.prototype.setHeight=function(d){this.rect.height=d},h.prototype.getCenterX=function(){return this.rect.x+this.rect.width/2},h.prototype.getCenterY=function(){return this.rect.y+this.rect.height/2},h.prototype.getCenter=function(){return new u(this.rect.x+this.rect.width/2,this.rect.y+this.rect.height/2)},h.prototype.getLocation=function(){return new u(this.rect.x,this.rect.y)},h.prototype.getRect=function(){return this.rect},h.prototype.getDiagonal=function(){return Math.sqrt(this.rect.width*this.rect.width+this.rect.height*this.rect.height)},h.prototype.getHalfTheDiagonal=function(){return Math.sqrt(this.rect.height*this.rect.height+this.rect.width*this.rect.width)/2},h.prototype.setRect=function(d,p){this.rect.x=d.x,this.rect.y=d.y,this.rect.width=p.width,this.rect.height=p.height},h.prototype.setCenter=function(d,p){this.rect.x=d-this.rect.width/2,this.rect.y=p-this.rect.height/2},h.prototype.setLocation=function(d,p){this.rect.x=d,this.rect.y=p},h.prototype.moveBy=function(d,p){this.rect.x+=d,this.rect.y+=p},h.prototype.getEdgeListToNode=function(d){var p=[],m,g=this;return g.edges.forEach(function(y){if(y.target==d){if(y.source!=g)throw"Incorrect edge source!";p.push(y)}}),p},h.prototype.getEdgesBetween=function(d){var p=[],m,g=this;return g.edges.forEach(function(y){if(!(y.source==g||y.target==g))throw"Incorrect edge source and/or target";(y.target==d||y.source==d)&&p.push(y)}),p},h.prototype.getNeighborsList=function(){var d=new Set,p=this;return p.edges.forEach(function(m){if(m.source==p)d.add(m.target);else{if(m.target!=p)throw"Incorrect incidency!";d.add(m.source)}}),d},h.prototype.withChildren=function(){var d=new Set,p,m;if(d.add(this),this.child!=null)for(var g=this.child.getNodes(),y=0;yp&&(this.rect.x-=(this.labelWidth-p)/2,this.setWidth(this.labelWidth)),this.labelHeight>m&&(this.labelPos=="center"?this.rect.y-=(this.labelHeight-m)/2:this.labelPos=="top"&&(this.rect.y-=this.labelHeight-m),this.setHeight(this.labelHeight))}}},h.prototype.getInclusionTreeDepth=function(){if(this.inclusionTreeDepth==i.MAX_VALUE)throw"assert failed";return this.inclusionTreeDepth},h.prototype.transform=function(d){var p=this.rect.x;p>s.WORLD_BOUNDARY?p=s.WORLD_BOUNDARY:p<-s.WORLD_BOUNDARY&&(p=-s.WORLD_BOUNDARY);var m=this.rect.y;m>s.WORLD_BOUNDARY?m=s.WORLD_BOUNDARY:m<-s.WORLD_BOUNDARY&&(m=-s.WORLD_BOUNDARY);var g=new u(p,m),y=d.inverseTransformPoint(g);this.setLocation(y.x,y.y)},h.prototype.getLeft=function(){return this.rect.x},h.prototype.getRight=function(){return this.rect.x+this.rect.width},h.prototype.getTop=function(){return this.rect.y},h.prototype.getBottom=function(){return this.rect.y+this.rect.height},h.prototype.getParent=function(){return this.owner==null?null:this.owner.getParent()},t.exports=h},function(t,e,r){"use strict";function n(i,a){i==null&&a==null?(this.x=0,this.y=0):(this.x=i,this.y=a)}o(n,"PointD"),n.prototype.getX=function(){return this.x},n.prototype.getY=function(){return this.y},n.prototype.setX=function(i){this.x=i},n.prototype.setY=function(i){this.y=i},n.prototype.getDifference=function(i){return new DimensionD(this.x-i.x,this.y-i.y)},n.prototype.getCopy=function(){return new n(this.x,this.y)},n.prototype.translate=function(i){return this.x+=i.width,this.y+=i.height,this},t.exports=n},function(t,e,r){"use strict";var n=r(2),i=r(10),a=r(0),s=r(6),l=r(3),u=r(1),h=r(13),f=r(12),d=r(11);function p(g,y,v){n.call(this,v),this.estimatedSize=i.MIN_VALUE,this.margin=a.DEFAULT_GRAPH_MARGIN,this.edges=[],this.nodes=[],this.isConnected=!1,this.parent=g,y!=null&&y instanceof s?this.graphManager=y:y!=null&&y instanceof Layout&&(this.graphManager=y.graphManager)}o(p,"LGraph"),p.prototype=Object.create(n.prototype);for(var m in n)p[m]=n[m];p.prototype.getNodes=function(){return this.nodes},p.prototype.getEdges=function(){return this.edges},p.prototype.getGraphManager=function(){return this.graphManager},p.prototype.getParent=function(){return this.parent},p.prototype.getLeft=function(){return this.left},p.prototype.getRight=function(){return this.right},p.prototype.getTop=function(){return this.top},p.prototype.getBottom=function(){return this.bottom},p.prototype.isConnected=function(){return this.isConnected},p.prototype.add=function(g,y,v){if(y==null&&v==null){var x=g;if(this.graphManager==null)throw"Graph has no graph mgr!";if(this.getNodes().indexOf(x)>-1)throw"Node already in graph!";return x.owner=this,this.getNodes().push(x),x}else{var b=g;if(!(this.getNodes().indexOf(y)>-1&&this.getNodes().indexOf(v)>-1))throw"Source or target not in graph!";if(!(y.owner==v.owner&&y.owner==this))throw"Both owners must be this graph!";return y.owner!=v.owner?null:(b.source=y,b.target=v,b.isInterGraph=!1,this.getEdges().push(b),y.edges.push(b),v!=y&&v.edges.push(b),b)}},p.prototype.remove=function(g){var y=g;if(g instanceof l){if(y==null)throw"Node is null!";if(!(y.owner!=null&&y.owner==this))throw"Owner graph is invalid!";if(this.graphManager==null)throw"Owner graph manager is invalid!";for(var v=y.edges.slice(),x,b=v.length,w=0;w-1&&E>-1))throw"Source and/or target doesn't know this edge!";x.source.edges.splice(T,1),x.target!=x.source&&x.target.edges.splice(E,1);var C=x.source.owner.getEdges().indexOf(x);if(C==-1)throw"Not in owner's edge list!";x.source.owner.getEdges().splice(C,1)}},p.prototype.updateLeftTop=function(){for(var g=i.MAX_VALUE,y=i.MAX_VALUE,v,x,b,w=this.getNodes(),C=w.length,T=0;Tv&&(g=v),y>x&&(y=x)}return g==i.MAX_VALUE?null:(w[0].getParent().paddingLeft!=null?b=w[0].getParent().paddingLeft:b=this.margin,this.left=y-b,this.top=g-b,new f(this.left,this.top))},p.prototype.updateBounds=function(g){for(var y=i.MAX_VALUE,v=-i.MAX_VALUE,x=i.MAX_VALUE,b=-i.MAX_VALUE,w,C,T,E,A,S=this.nodes,_=S.length,I=0;I<_;I++){var D=S[I];g&&D.child!=null&&D.updateBounds(),w=D.getLeft(),C=D.getRight(),T=D.getTop(),E=D.getBottom(),y>w&&(y=w),vT&&(x=T),bw&&(y=w),vT&&(x=T),b=this.nodes.length){var _=0;v.forEach(function(I){I.owner==g&&_++}),_==this.nodes.length&&(this.isConnected=!0)}},t.exports=p},function(t,e,r){"use strict";var n,i=r(1);function a(s){n=r(5),this.layout=s,this.graphs=[],this.edges=[]}o(a,"LGraphManager"),a.prototype.addRoot=function(){var s=this.layout.newGraph(),l=this.layout.newNode(null),u=this.add(s,l);return this.setRootGraph(u),this.rootGraph},a.prototype.add=function(s,l,u,h,f){if(u==null&&h==null&&f==null){if(s==null)throw"Graph is null!";if(l==null)throw"Parent node is null!";if(this.graphs.indexOf(s)>-1)throw"Graph already in this graph mgr!";if(this.graphs.push(s),s.parent!=null)throw"Already has a parent!";if(l.child!=null)throw"Already has a child!";return s.parent=l,l.child=s,s}else{f=u,h=l,u=s;var d=h.getOwner(),p=f.getOwner();if(!(d!=null&&d.getGraphManager()==this))throw"Source not in this graph mgr!";if(!(p!=null&&p.getGraphManager()==this))throw"Target not in this graph mgr!";if(d==p)return u.isInterGraph=!1,d.add(u,h,f);if(u.isInterGraph=!0,u.source=h,u.target=f,this.edges.indexOf(u)>-1)throw"Edge already in inter-graph edge list!";if(this.edges.push(u),!(u.source!=null&&u.target!=null))throw"Edge source and/or target is null!";if(!(u.source.edges.indexOf(u)==-1&&u.target.edges.indexOf(u)==-1))throw"Edge already in source and/or target incidency list!";return u.source.edges.push(u),u.target.edges.push(u),u}},a.prototype.remove=function(s){if(s instanceof n){var l=s;if(l.getGraphManager()!=this)throw"Graph not in this graph mgr";if(!(l==this.rootGraph||l.parent!=null&&l.parent.graphManager==this))throw"Invalid parent node!";var u=[];u=u.concat(l.getEdges());for(var h,f=u.length,d=0;d=s.getRight()?l[0]+=Math.min(s.getX()-a.getX(),a.getRight()-s.getRight()):s.getX()<=a.getX()&&s.getRight()>=a.getRight()&&(l[0]+=Math.min(a.getX()-s.getX(),s.getRight()-a.getRight())),a.getY()<=s.getY()&&a.getBottom()>=s.getBottom()?l[1]+=Math.min(s.getY()-a.getY(),a.getBottom()-s.getBottom()):s.getY()<=a.getY()&&s.getBottom()>=a.getBottom()&&(l[1]+=Math.min(a.getY()-s.getY(),s.getBottom()-a.getBottom()));var f=Math.abs((s.getCenterY()-a.getCenterY())/(s.getCenterX()-a.getCenterX()));s.getCenterY()===a.getCenterY()&&s.getCenterX()===a.getCenterX()&&(f=1);var d=f*l[0],p=l[1]/f;l[0]d)return l[0]=u,l[1]=m,l[2]=f,l[3]=S,!1;if(hf)return l[0]=p,l[1]=h,l[2]=E,l[3]=d,!1;if(uf?(l[0]=y,l[1]=v,k=!0):(l[0]=g,l[1]=m,k=!0):R===M&&(u>f?(l[0]=p,l[1]=m,k=!0):(l[0]=x,l[1]=v,k=!0)),-O===M?f>u?(l[2]=A,l[3]=S,L=!0):(l[2]=E,l[3]=T,L=!0):O===M&&(f>u?(l[2]=C,l[3]=T,L=!0):(l[2]=_,l[3]=S,L=!0)),k&&L)return!1;if(u>f?h>d?(B=this.getCardinalDirection(R,M,4),F=this.getCardinalDirection(O,M,2)):(B=this.getCardinalDirection(-R,M,3),F=this.getCardinalDirection(-O,M,1)):h>d?(B=this.getCardinalDirection(-R,M,1),F=this.getCardinalDirection(-O,M,3)):(B=this.getCardinalDirection(R,M,2),F=this.getCardinalDirection(O,M,4)),!k)switch(B){case 1:z=m,P=u+-w/M,l[0]=P,l[1]=z;break;case 2:P=x,z=h+b*M,l[0]=P,l[1]=z;break;case 3:z=v,P=u+w/M,l[0]=P,l[1]=z;break;case 4:P=y,z=h+-b*M,l[0]=P,l[1]=z;break}if(!L)switch(F){case 1:H=T,$=f+-D/M,l[2]=$,l[3]=H;break;case 2:$=_,H=d+I*M,l[2]=$,l[3]=H;break;case 3:H=S,$=f+D/M,l[2]=$,l[3]=H;break;case 4:$=A,H=d+-I*M,l[2]=$,l[3]=H;break}}return!1},i.getCardinalDirection=function(a,s,l){return a>s?l:1+l%4},i.getIntersection=function(a,s,l,u){if(u==null)return this.getIntersection2(a,s,l);var h=a.x,f=a.y,d=s.x,p=s.y,m=l.x,g=l.y,y=u.x,v=u.y,x=void 0,b=void 0,w=void 0,C=void 0,T=void 0,E=void 0,A=void 0,S=void 0,_=void 0;return w=p-f,T=h-d,A=d*f-h*p,C=v-g,E=m-y,S=y*g-m*v,_=w*E-C*T,_===0?null:(x=(T*S-E*A)/_,b=(C*A-w*S)/_,new n(x,b))},i.angleOfVector=function(a,s,l,u){var h=void 0;return a!==l?(h=Math.atan((u-s)/(l-a)),l0?1:i<0?-1:0},n.floor=function(i){return i<0?Math.ceil(i):Math.floor(i)},n.ceil=function(i){return i<0?Math.floor(i):Math.ceil(i)},t.exports=n},function(t,e,r){"use strict";function n(){}o(n,"Integer"),n.MAX_VALUE=2147483647,n.MIN_VALUE=-2147483648,t.exports=n},function(t,e,r){"use strict";var n=function(){function h(f,d){for(var p=0;p"u"?"undefined":n(a);return a==null||s!="object"&&s!="function"},t.exports=i},function(t,e,r){"use strict";function n(m){if(Array.isArray(m)){for(var g=0,y=Array(m.length);g0&&g;){for(w.push(T[0]);w.length>0&&g;){var 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i(a,s){this.lworldOrgX=0,this.lworldOrgY=0,this.ldeviceOrgX=0,this.ldeviceOrgY=0,this.lworldExtX=1,this.lworldExtY=1,this.ldeviceExtX=1,this.ldeviceExtY=1}o(i,"Transform"),i.prototype.getWorldOrgX=function(){return this.lworldOrgX},i.prototype.setWorldOrgX=function(a){this.lworldOrgX=a},i.prototype.getWorldOrgY=function(){return this.lworldOrgY},i.prototype.setWorldOrgY=function(a){this.lworldOrgY=a},i.prototype.getWorldExtX=function(){return this.lworldExtX},i.prototype.setWorldExtX=function(a){this.lworldExtX=a},i.prototype.getWorldExtY=function(){return this.lworldExtY},i.prototype.setWorldExtY=function(a){this.lworldExtY=a},i.prototype.getDeviceOrgX=function(){return this.ldeviceOrgX},i.prototype.setDeviceOrgX=function(a){this.ldeviceOrgX=a},i.prototype.getDeviceOrgY=function(){return this.ldeviceOrgY},i.prototype.setDeviceOrgY=function(a){this.ldeviceOrgY=a},i.prototype.getDeviceExtX=function(){return this.ldeviceExtX},i.prototype.setDeviceExtX=function(a){this.ldeviceExtX=a},i.prototype.getDeviceExtY=function(){return this.ldeviceExtY},i.prototype.setDeviceExtY=function(a){this.ldeviceExtY=a},i.prototype.transformX=function(a){var s=0,l=this.lworldExtX;return l!=0&&(s=this.ldeviceOrgX+(a-this.lworldOrgX)*this.ldeviceExtX/l),s},i.prototype.transformY=function(a){var s=0,l=this.lworldExtY;return l!=0&&(s=this.ldeviceOrgY+(a-this.lworldOrgY)*this.ldeviceExtY/l),s},i.prototype.inverseTransformX=function(a){var s=0,l=this.ldeviceExtX;return l!=0&&(s=this.lworldOrgX+(a-this.ldeviceOrgX)*this.lworldExtX/l),s},i.prototype.inverseTransformY=function(a){var s=0,l=this.ldeviceExtY;return l!=0&&(s=this.lworldOrgY+(a-this.ldeviceOrgY)*this.lworldExtY/l),s},i.prototype.inverseTransformPoint=function(a){var s=new n(this.inverseTransformX(a.x),this.inverseTransformY(a.y));return s},t.exports=i},function(t,e,r){"use strict";function n(d){if(Array.isArray(d)){for(var p=0,m=Array(d.length);pa.ADAPTATION_LOWER_NODE_LIMIT&&(this.coolingFactor=Math.max(this.coolingFactor*a.COOLING_ADAPTATION_FACTOR,this.coolingFactor-(d-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*this.coolingFactor*(1-a.COOLING_ADAPTATION_FACTOR))),this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT_INCREMENTAL):(d>a.ADAPTATION_LOWER_NODE_LIMIT?this.coolingFactor=Math.max(a.COOLING_ADAPTATION_FACTOR,1-(d-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*(1-a.COOLING_ADAPTATION_FACTOR)):this.coolingFactor=1,this.initialCoolingFactor=this.coolingFactor,this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT),this.maxIterations=Math.max(this.getAllNodes().length*5,this.maxIterations),this.totalDisplacementThreshold=this.displacementThresholdPerNode*this.getAllNodes().length,this.repulsionRange=this.calcRepulsionRange()},h.prototype.calcSpringForces=function(){for(var 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E=-1,A=Number.MAX_VALUE,S=0;SA&&(E=S,A=T.rowWidth[S]);return E},w.prototype.canAddHorizontal=function(T,E,A){var S=this.getShortestRowIndex(T);if(S<0)return!0;var _=T.rowWidth[S];if(_+T.horizontalPadding+E<=T.width)return!0;var I=0;T.rowHeight[S]0&&(I=A+T.verticalPadding-T.rowHeight[S]);var D;T.width-_>=E+T.horizontalPadding?D=(T.height+I)/(_+E+T.horizontalPadding):D=(T.height+I)/T.width,I=A+T.verticalPadding;var k;return T.widthI&&E!=A){S.splice(-1,1),T.rows[A].push(_),T.rowWidth[E]=T.rowWidth[E]-I,T.rowWidth[A]=T.rowWidth[A]+I,T.width=T.rowWidth[instance.getLongestRowIndex(T)];for(var D=Number.MIN_VALUE,k=0;kD&&(D=S[k].height);E>0&&(D+=T.verticalPadding);var L=T.rowHeight[E]+T.rowHeight[A];T.rowHeight[E]=D,T.rowHeight[A]<_.height+T.verticalPadding&&(T.rowHeight[A]=_.height+T.verticalPadding);var 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38:this.$={type:"applyStyles",id:_[D-1].trim(),stylesStr:_[D].trim()};break}},"anonymous"),table:[{9:1,10:[1,2]},{1:[3]},{11:3,13:4,19:5,20:6,21:e,22:8,23:9,24:10,25:11,26:12,28:r,29:n,31:i,32:a,40:s,44:l,47:u},{8:[1,20]},t(h,[2,12],{13:4,19:5,20:6,22:8,23:9,24:10,25:11,26:12,11:21,21:e,28:r,29:n,31:i,32:a,40:s,44:l,47:u}),t(f,[2,16],{14:22,15:d,16:p}),t(f,[2,17]),t(f,[2,18]),t(f,[2,19]),t(f,[2,20]),t(f,[2,21]),t(f,[2,22]),t(m,[2,25],{27:[1,25]}),t(f,[2,26]),{19:26,26:12,32:a},{11:27,13:4,19:5,20:6,21:e,22:8,23:9,24:10,25:11,26:12,28:r,29:n,31:i,32:a,40:s,44:l,47:u},{41:[1,28],43:[1,29]},{45:[1,30]},{48:[1,31]},t(g,[2,29],{33:32,36:[1,33],38:[1,34]}),{1:[2,7]},t(h,[2,13]),{26:35,32:a},{32:[2,14]},{17:[1,36]},t(m,[2,24]),{11:37,13:4,14:22,15:d,16:p,19:5,20:6,21:e,22:8,23:9,24:10,25:11,26:12,28:r,29:n,31:i,32:a,40:s,44:l,47:u},{30:[1,38]},{42:[1,39]},{42:[1,40]},{46:[1,41]},{49:[1,42]},t(g,[2,30]),{18:[1,43]},{18:[1,44]},t(m,[2,23]),{18:[1,45]},{30:[1,46]},t(f,[2,28]),t(f,[2,35]),t(f,[2,36]),t(f,[2,37]),t(f,[2,38]),{37:[1,47]},{34:48,35:y},{15:[1,50]},t(f,[2,27]),t(g,[2,33]),{39:[1,51]},{34:52,35:y,39:[2,31]},{32:[2,15]},t(g,[2,34]),{39:[2,32]}],defaultActions:{20:[2,7],23:[2,14],50:[2,15],52:[2,32]},parseError:o(function(C,T){if(T.recoverable)this.trace(C);else{var E=new Error(C);throw E.hash=T,E}},"parseError"),parse:o(function(C){var T=this,E=[0],A=[],S=[null],_=[],I=this.table,D="",k=0,L=0,R=0,O=2,M=1,B=_.slice.call(arguments,1),F=Object.create(this.lexer),P={yy:{}};for(var z in this.yy)Object.prototype.hasOwnProperty.call(this.yy,z)&&(P.yy[z]=this.yy[z]);F.setInput(C,P.yy),P.yy.lexer=F,P.yy.parser=this,typeof F.yylloc>"u"&&(F.yylloc={});var $=F.yylloc;_.push($);var H=F.options&&F.options.ranges;typeof P.yy.parseError=="function"?this.parseError=P.yy.parseError:this.parseError=Object.getPrototypeOf(this).parseError;function Q(ce){E.length=E.length-2*ce,S.length=S.length-ce,_.length=_.length-ce}o(Q,"popStack");function j(){var ce;return ce=A.pop()||F.lex()||M,typeof ce!="number"&&(ce instanceof Array&&(A=ce,ce=A.pop()),ce=T.symbols_[ce]||ce),ce}o(j,"lex");for(var ie,ne,le,he,K,X,te={},J,se,ue,Z;;){if(le=E[E.length-1],this.defaultActions[le]?he=this.defaultActions[le]:((ie===null||typeof ie>"u")&&(ie=j()),he=I[le]&&I[le][ie]),typeof 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S=this.yylloc.range;return this.yylloc={first_line:this.yylloc.first_line,last_line:this.yylineno+1,first_column:this.yylloc.first_column,last_column:E?(E.length===A.length?this.yylloc.first_column:0)+A[A.length-E.length].length-E[0].length:this.yylloc.first_column-T},this.options.ranges&&(this.yylloc.range=[S[0],S[0]+this.yyleng-T]),this.yyleng=this.yytext.length,this},"unput"),more:o(function(){return this._more=!0,this},"more"),reject:o(function(){if(this.options.backtrack_lexer)this._backtrack=!0;else return this.parseError("Lexical error on line "+(this.yylineno+1)+`. You can only invoke reject() in the lexer when the lexer is of the backtracking persuasion (options.backtrack_lexer = true). +`+this.showPosition(),{text:"",token:null,line:this.yylineno});return this},"reject"),less:o(function(C){this.unput(this.match.slice(C))},"less"),pastInput:o(function(){var C=this.matched.substr(0,this.matched.length-this.match.length);return(C.length>20?"...":"")+C.substr(-20).replace(/\n/g,"")},"pastInput"),upcomingInput:o(function(){var C=this.match;return C.length<20&&(C+=this._input.substr(0,20-C.length)),(C.substr(0,20)+(C.length>20?"...":"")).replace(/\n/g,"")},"upcomingInput"),showPosition:o(function(){var C=this.pastInput(),T=new Array(C.length+1).join("-");return C+this.upcomingInput()+` +`+T+"^"},"showPosition"),test_match:o(function(C,T){var E,A,S;if(this.options.backtrack_lexer&&(S={yylineno:this.yylineno,yylloc:{first_line:this.yylloc.first_line,last_line:this.last_line,first_column:this.yylloc.first_column,last_column:this.yylloc.last_column},yytext:this.yytext,match:this.match,matches:this.matches,matched:this.matched,yyleng:this.yyleng,offset:this.offset,_more:this._more,_input:this._input,yy:this.yy,conditionStack:this.conditionStack.slice(0),done:this.done},this.options.ranges&&(S.yylloc.range=this.yylloc.range.slice(0))),A=C[0].match(/(?:\r\n?|\n).*/g),A&&(this.yylineno+=A.length),this.yylloc={first_line:this.yylloc.last_line,last_line:this.yylineno+1,first_column:this.yylloc.last_column,last_column:A?A[A.length-1].length-A[A.length-1].match(/\r?\n?/)[0].length:this.yylloc.last_column+C[0].length},this.yytext+=C[0],this.match+=C[0],this.matches=C,this.yyleng=this.yytext.length,this.options.ranges&&(this.yylloc.range=[this.offset,this.offset+=this.yyleng]),this._more=!1,this._backtrack=!1,this._input=this._input.slice(C[0].length),this.matched+=C[0],E=this.performAction.call(this,this.yy,this,T,this.conditionStack[this.conditionStack.length-1]),this.done&&this._input&&(this.done=!1),E)return E;if(this._backtrack){for(var _ in S)this[_]=S[_];return!1}return!1},"test_match"),next:o(function(){if(this.done)return this.EOF;this._input||(this.done=!0);var C,T,E,A;this._more||(this.yytext="",this.match="");for(var S=this._currentRules(),_=0;_T[0].length)){if(T=E,A=_,this.options.backtrack_lexer){if(C=this.test_match(E,S[_]),C!==!1)return C;if(this._backtrack){T=!1;continue}else return!1}else if(!this.options.flex)break}return T?(C=this.test_match(T,S[A]),C!==!1?C:!1):this._input===""?this.EOF:this.parseError("Lexical error on line "+(this.yylineno+1)+`. Unrecognized text. +`+this.showPosition(),{text:"",token:null,line:this.yylineno})},"next"),lex:o(function(){var T=this.next();return T||this.lex()},"lex"),begin:o(function(T){this.conditionStack.push(T)},"begin"),popState:o(function(){var T=this.conditionStack.length-1;return T>0?this.conditionStack.pop():this.conditionStack[0]},"popState"),_currentRules:o(function(){return this.conditionStack.length&&this.conditionStack[this.conditionStack.length-1]?this.conditions[this.conditionStack[this.conditionStack.length-1]].rules:this.conditions.INITIAL.rules},"_currentRules"),topState:o(function(T){return T=this.conditionStack.length-1-Math.abs(T||0),T>=0?this.conditionStack[T]:"INITIAL"},"topState"),pushState:o(function(T){this.begin(T)},"pushState"),stateStackSize:o(function(){return this.conditionStack.length},"stateStackSize"),options:{},performAction:o(function(T,E,A,S){var _=S;switch(A){case 0:return 10;case 1:return T.getLogger().debug("Found space-block"),31;break;case 2:return T.getLogger().debug("Found nl-block"),31;break;case 3:return T.getLogger().debug("Found space-block"),29;break;case 4:T.getLogger().debug(".",E.yytext);break;case 5:T.getLogger().debug("_",E.yytext);break;case 6:return 5;case 7:return E.yytext=-1,28;break;case 8:return E.yytext=E.yytext.replace(/columns\s+/,""),T.getLogger().debug("COLUMNS (LEX)",E.yytext),28;break;case 9:this.pushState("md_string");break;case 10:return"MD_STR";case 11:this.popState();break;case 12:this.pushState("string");break;case 13:T.getLogger().debug("LEX: POPPING STR:",E.yytext),this.popState();break;case 14:return T.getLogger().debug("LEX: STR end:",E.yytext),"STR";break;case 15:return E.yytext=E.yytext.replace(/space\:/,""),T.getLogger().debug("SPACE NUM (LEX)",E.yytext),21;break;case 16:return E.yytext="1",T.getLogger().debug("COLUMNS (LEX)",E.yytext),21;break;case 17:return 43;case 18:return"LINKSTYLE";case 19:return"INTERPOLATE";case 20:return this.pushState("CLASSDEF"),40;break;case 21:return this.popState(),this.pushState("CLASSDEFID"),"DEFAULT_CLASSDEF_ID";break;case 22:return this.popState(),this.pushState("CLASSDEFID"),41;break;case 23:return this.popState(),42;break;case 24:return this.pushState("CLASS"),44;break;case 25:return this.popState(),this.pushState("CLASS_STYLE"),45;break;case 26:return this.popState(),46;break;case 27:return this.pushState("STYLE_STMNT"),47;break;case 28:return this.popState(),this.pushState("STYLE_DEFINITION"),48;break;case 29:return this.popState(),49;break;case 30:return this.pushState("acc_title"),"acc_title";break;case 31:return this.popState(),"acc_title_value";break;case 32:return this.pushState("acc_descr"),"acc_descr";break;case 33:return this.popState(),"acc_descr_value";break;case 34:this.pushState("acc_descr_multiline");break;case 35:this.popState();break;case 36:return"acc_descr_multiline_value";case 37:return 30;case 38:return this.popState(),T.getLogger().debug("Lex: (("),"NODE_DEND";break;case 39:return this.popState(),T.getLogger().debug("Lex: (("),"NODE_DEND";break;case 40:return this.popState(),T.getLogger().debug("Lex: ))"),"NODE_DEND";break;case 41:return this.popState(),T.getLogger().debug("Lex: (("),"NODE_DEND";break;case 42:return this.popState(),T.getLogger().debug("Lex: (("),"NODE_DEND";break;case 43:return this.popState(),T.getLogger().debug("Lex: (-"),"NODE_DEND";break;case 44:return this.popState(),T.getLogger().debug("Lex: -)"),"NODE_DEND";break;case 45:return this.popState(),T.getLogger().debug("Lex: (("),"NODE_DEND";break;case 46:return this.popState(),T.getLogger().debug("Lex: ]]"),"NODE_DEND";break;case 47:return this.popState(),T.getLogger().debug("Lex: ("),"NODE_DEND";break;case 48:return this.popState(),T.getLogger().debug("Lex: ])"),"NODE_DEND";break;case 49:return this.popState(),T.getLogger().debug("Lex: /]"),"NODE_DEND";break;case 50:return this.popState(),T.getLogger().debug("Lex: /]"),"NODE_DEND";break;case 51:return this.popState(),T.getLogger().debug("Lex: )]"),"NODE_DEND";break;case 52:return this.popState(),T.getLogger().debug("Lex: )"),"NODE_DEND";break;case 53:return this.popState(),T.getLogger().debug("Lex: ]>"),"NODE_DEND";break;case 54:return this.popState(),T.getLogger().debug("Lex: ]"),"NODE_DEND";break;case 55:return T.getLogger().debug("Lexa: -)"),this.pushState("NODE"),36;break;case 56:return T.getLogger().debug("Lexa: (-"),this.pushState("NODE"),36;break;case 57:return T.getLogger().debug("Lexa: ))"),this.pushState("NODE"),36;break;case 58:return T.getLogger().debug("Lexa: )"),this.pushState("NODE"),36;break;case 59:return T.getLogger().debug("Lex: ((("),this.pushState("NODE"),36;break;case 60:return T.getLogger().debug("Lexa: )"),this.pushState("NODE"),36;break;case 61:return T.getLogger().debug("Lexa: )"),this.pushState("NODE"),36;break;case 62:return T.getLogger().debug("Lexa: )"),this.pushState("NODE"),36;break;case 63:return T.getLogger().debug("Lexc: >"),this.pushState("NODE"),36;break;case 64:return T.getLogger().debug("Lexa: (["),this.pushState("NODE"),36;break;case 65:return T.getLogger().debug("Lexa: )"),this.pushState("NODE"),36;break;case 66:return this.pushState("NODE"),36;break;case 67:return this.pushState("NODE"),36;break;case 68:return this.pushState("NODE"),36;break;case 69:return this.pushState("NODE"),36;break;case 70:return this.pushState("NODE"),36;break;case 71:return this.pushState("NODE"),36;break;case 72:return this.pushState("NODE"),36;break;case 73:return T.getLogger().debug("Lexa: ["),this.pushState("NODE"),36;break;case 74:return this.pushState("BLOCK_ARROW"),T.getLogger().debug("LEX ARR START"),38;break;case 75:return T.getLogger().debug("Lex: NODE_ID",E.yytext),32;break;case 76:return T.getLogger().debug("Lex: EOF",E.yytext),8;break;case 77:this.pushState("md_string");break;case 78:this.pushState("md_string");break;case 79:return"NODE_DESCR";case 80:this.popState();break;case 81:T.getLogger().debug("Lex: Starting string"),this.pushState("string");break;case 82:T.getLogger().debug("LEX ARR: Starting string"),this.pushState("string");break;case 83:return T.getLogger().debug("LEX: NODE_DESCR:",E.yytext),"NODE_DESCR";break;case 84:T.getLogger().debug("LEX POPPING"),this.popState();break;case 85:T.getLogger().debug("Lex: =>BAE"),this.pushState("ARROW_DIR");break;case 86:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex (right): dir:",E.yytext),"DIR";break;case 87:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex (left):",E.yytext),"DIR";break;case 88:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex (x):",E.yytext),"DIR";break;case 89:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex (y):",E.yytext),"DIR";break;case 90:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex (up):",E.yytext),"DIR";break;case 91:return E.yytext=E.yytext.replace(/^,\s*/,""),T.getLogger().debug("Lex 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g=this.child.getNodes(),y=0;yp?(this.rect.x-=(this.labelWidth-p)/2,this.setWidth(this.labelWidth)):this.labelPosHorizontal=="right"&&this.setWidth(p+this.labelWidth)),this.labelHeight&&(this.labelPosVertical=="top"?(this.rect.y-=this.labelHeight,this.setHeight(m+this.labelHeight)):this.labelPosVertical=="center"&&this.labelHeight>m?(this.rect.y-=(this.labelHeight-m)/2,this.setHeight(this.labelHeight)):this.labelPosVertical=="bottom"&&this.setHeight(m+this.labelHeight))}}},h.prototype.getInclusionTreeDepth=function(){if(this.inclusionTreeDepth==i.MAX_VALUE)throw"assert failed";return this.inclusionTreeDepth},h.prototype.transform=function(d){var p=this.rect.x;p>s.WORLD_BOUNDARY?p=s.WORLD_BOUNDARY:p<-s.WORLD_BOUNDARY&&(p=-s.WORLD_BOUNDARY);var m=this.rect.y;m>s.WORLD_BOUNDARY?m=s.WORLD_BOUNDARY:m<-s.WORLD_BOUNDARY&&(m=-s.WORLD_BOUNDARY);var g=new u(p,m),y=d.inverseTransformPoint(g);this.setLocation(y.x,y.y)},h.prototype.getLeft=function(){return this.rect.x},h.prototype.getRight=function(){return this.rect.x+this.rect.width},h.prototype.getTop=function(){return this.rect.y},h.prototype.getBottom=function(){return this.rect.y+this.rect.height},h.prototype.getParent=function(){return this.owner==null?null:this.owner.getParent()},t.exports=h},function(t,e,r){"use strict";var n=r(0);function i(){}o(i,"FDLayoutConstants");for(var a in n)i[a]=n[a];i.MAX_ITERATIONS=2500,i.DEFAULT_EDGE_LENGTH=50,i.DEFAULT_SPRING_STRENGTH=.45,i.DEFAULT_REPULSION_STRENGTH=4500,i.DEFAULT_GRAVITY_STRENGTH=.4,i.DEFAULT_COMPOUND_GRAVITY_STRENGTH=1,i.DEFAULT_GRAVITY_RANGE_FACTOR=3.8,i.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=1.5,i.DEFAULT_USE_SMART_IDEAL_EDGE_LENGTH_CALCULATION=!0,i.DEFAULT_USE_SMART_REPULSION_RANGE_CALCULATION=!0,i.DEFAULT_COOLING_FACTOR_INCREMENTAL=.3,i.COOLING_ADAPTATION_FACTOR=.33,i.ADAPTATION_LOWER_NODE_LIMIT=1e3,i.ADAPTATION_UPPER_NODE_LIMIT=5e3,i.MAX_NODE_DISPLACEMENT_INCREMENTAL=100,i.MAX_NODE_DISPLACEMENT=i.MAX_NODE_DISPLACEMENT_INCREMENTAL*3,i.MIN_REPULSION_DIST=i.DEFAULT_EDGE_LENGTH/10,i.CONVERGENCE_CHECK_PERIOD=100,i.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=.1,i.MIN_EDGE_LENGTH=1,i.GRID_CALCULATION_CHECK_PERIOD=10,t.exports=i},function(t,e,r){"use strict";function n(i,a){i==null&&a==null?(this.x=0,this.y=0):(this.x=i,this.y=a)}o(n,"PointD"),n.prototype.getX=function(){return this.x},n.prototype.getY=function(){return this.y},n.prototype.setX=function(i){this.x=i},n.prototype.setY=function(i){this.y=i},n.prototype.getDifference=function(i){return new DimensionD(this.x-i.x,this.y-i.y)},n.prototype.getCopy=function(){return new n(this.x,this.y)},n.prototype.translate=function(i){return this.x+=i.width,this.y+=i.height,this},t.exports=n},function(t,e,r){"use strict";var n=r(2),i=r(10),a=r(0),s=r(7),l=r(3),u=r(1),h=r(13),f=r(12),d=r(11);function p(g,y,v){n.call(this,v),this.estimatedSize=i.MIN_VALUE,this.margin=a.DEFAULT_GRAPH_MARGIN,this.edges=[],this.nodes=[],this.isConnected=!1,this.parent=g,y!=null&&y instanceof s?this.graphManager=y:y!=null&&y instanceof Layout&&(this.graphManager=y.graphManager)}o(p,"LGraph"),p.prototype=Object.create(n.prototype);for(var m in n)p[m]=n[m];p.prototype.getNodes=function(){return this.nodes},p.prototype.getEdges=function(){return this.edges},p.prototype.getGraphManager=function(){return this.graphManager},p.prototype.getParent=function(){return this.parent},p.prototype.getLeft=function(){return this.left},p.prototype.getRight=function(){return this.right},p.prototype.getTop=function(){return this.top},p.prototype.getBottom=function(){return this.bottom},p.prototype.isConnected=function(){return this.isConnected},p.prototype.add=function(g,y,v){if(y==null&&v==null){var x=g;if(this.graphManager==null)throw"Graph has no graph mgr!";if(this.getNodes().indexOf(x)>-1)throw"Node already in graph!";return x.owner=this,this.getNodes().push(x),x}else{var b=g;if(!(this.getNodes().indexOf(y)>-1&&this.getNodes().indexOf(v)>-1))throw"Source or target not in graph!";if(!(y.owner==v.owner&&y.owner==this))throw"Both owners must be this graph!";return y.owner!=v.owner?null:(b.source=y,b.target=v,b.isInterGraph=!1,this.getEdges().push(b),y.edges.push(b),v!=y&&v.edges.push(b),b)}},p.prototype.remove=function(g){var y=g;if(g instanceof l){if(y==null)throw"Node is null!";if(!(y.owner!=null&&y.owner==this))throw"Owner graph is invalid!";if(this.graphManager==null)throw"Owner graph manager is invalid!";for(var v=y.edges.slice(),x,b=v.length,w=0;w-1&&E>-1))throw"Source and/or target doesn't know this edge!";x.source.edges.splice(T,1),x.target!=x.source&&x.target.edges.splice(E,1);var C=x.source.owner.getEdges().indexOf(x);if(C==-1)throw"Not in owner's edge list!";x.source.owner.getEdges().splice(C,1)}},p.prototype.updateLeftTop=function(){for(var g=i.MAX_VALUE,y=i.MAX_VALUE,v,x,b,w=this.getNodes(),C=w.length,T=0;Tv&&(g=v),y>x&&(y=x)}return g==i.MAX_VALUE?null:(w[0].getParent().paddingLeft!=null?b=w[0].getParent().paddingLeft:b=this.margin,this.left=y-b,this.top=g-b,new f(this.left,this.top))},p.prototype.updateBounds=function(g){for(var y=i.MAX_VALUE,v=-i.MAX_VALUE,x=i.MAX_VALUE,b=-i.MAX_VALUE,w,C,T,E,A,S=this.nodes,_=S.length,I=0;I<_;I++){var D=S[I];g&&D.child!=null&&D.updateBounds(),w=D.getLeft(),C=D.getRight(),T=D.getTop(),E=D.getBottom(),y>w&&(y=w),vT&&(x=T),bw&&(y=w),vT&&(x=T),b=this.nodes.length){var _=0;v.forEach(function(I){I.owner==g&&_++}),_==this.nodes.length&&(this.isConnected=!0)}},t.exports=p},function(t,e,r){"use strict";var n,i=r(1);function a(s){n=r(6),this.layout=s,this.graphs=[],this.edges=[]}o(a,"LGraphManager"),a.prototype.addRoot=function(){var s=this.layout.newGraph(),l=this.layout.newNode(null),u=this.add(s,l);return this.setRootGraph(u),this.rootGraph},a.prototype.add=function(s,l,u,h,f){if(u==null&&h==null&&f==null){if(s==null)throw"Graph is null!";if(l==null)throw"Parent node is null!";if(this.graphs.indexOf(s)>-1)throw"Graph already in this graph mgr!";if(this.graphs.push(s),s.parent!=null)throw"Already has a parent!";if(l.child!=null)throw"Already has a child!";return s.parent=l,l.child=s,s}else{f=u,h=l,u=s;var d=h.getOwner(),p=f.getOwner();if(!(d!=null&&d.getGraphManager()==this))throw"Source not in this graph mgr!";if(!(p!=null&&p.getGraphManager()==this))throw"Target not in this graph mgr!";if(d==p)return u.isInterGraph=!1,d.add(u,h,f);if(u.isInterGraph=!0,u.source=h,u.target=f,this.edges.indexOf(u)>-1)throw"Edge already in inter-graph edge list!";if(this.edges.push(u),!(u.source!=null&&u.target!=null))throw"Edge source and/or target is null!";if(!(u.source.edges.indexOf(u)==-1&&u.target.edges.indexOf(u)==-1))throw"Edge already in source and/or target incidency list!";return u.source.edges.push(u),u.target.edges.push(u),u}},a.prototype.remove=function(s){if(s instanceof n){var l=s;if(l.getGraphManager()!=this)throw"Graph not in this graph mgr";if(!(l==this.rootGraph||l.parent!=null&&l.parent.graphManager==this))throw"Invalid parent node!";var u=[];u=u.concat(l.getEdges());for(var h,f=u.length,d=0;d=s.getRight()?l[0]+=Math.min(s.getX()-a.getX(),a.getRight()-s.getRight()):s.getX()<=a.getX()&&s.getRight()>=a.getRight()&&(l[0]+=Math.min(a.getX()-s.getX(),s.getRight()-a.getRight())),a.getY()<=s.getY()&&a.getBottom()>=s.getBottom()?l[1]+=Math.min(s.getY()-a.getY(),a.getBottom()-s.getBottom()):s.getY()<=a.getY()&&s.getBottom()>=a.getBottom()&&(l[1]+=Math.min(a.getY()-s.getY(),s.getBottom()-a.getBottom()));var f=Math.abs((s.getCenterY()-a.getCenterY())/(s.getCenterX()-a.getCenterX()));s.getCenterY()===a.getCenterY()&&s.getCenterX()===a.getCenterX()&&(f=1);var d=f*l[0],p=l[1]/f;l[0]d)return l[0]=u,l[1]=m,l[2]=f,l[3]=S,!1;if(hf)return l[0]=p,l[1]=h,l[2]=E,l[3]=d,!1;if(uf?(l[0]=y,l[1]=v,k=!0):(l[0]=g,l[1]=m,k=!0):R===M&&(u>f?(l[0]=p,l[1]=m,k=!0):(l[0]=x,l[1]=v,k=!0)),-O===M?f>u?(l[2]=A,l[3]=S,L=!0):(l[2]=E,l[3]=T,L=!0):O===M&&(f>u?(l[2]=C,l[3]=T,L=!0):(l[2]=_,l[3]=S,L=!0)),k&&L)return!1;if(u>f?h>d?(B=this.getCardinalDirection(R,M,4),F=this.getCardinalDirection(O,M,2)):(B=this.getCardinalDirection(-R,M,3),F=this.getCardinalDirection(-O,M,1)):h>d?(B=this.getCardinalDirection(-R,M,1),F=this.getCardinalDirection(-O,M,3)):(B=this.getCardinalDirection(R,M,2),F=this.getCardinalDirection(O,M,4)),!k)switch(B){case 1:z=m,P=u+-w/M,l[0]=P,l[1]=z;break;case 2:P=x,z=h+b*M,l[0]=P,l[1]=z;break;case 3:z=v,P=u+w/M,l[0]=P,l[1]=z;break;case 4:P=y,z=h+-b*M,l[0]=P,l[1]=z;break}if(!L)switch(F){case 1:H=T,$=f+-D/M,l[2]=$,l[3]=H;break;case 2:$=_,H=d+I*M,l[2]=$,l[3]=H;break;case 3:H=S,$=f+D/M,l[2]=$,l[3]=H;break;case 4:$=A,H=d+-I*M,l[2]=$,l[3]=H;break}}return!1},i.getCardinalDirection=function(a,s,l){return a>s?l:1+l%4},i.getIntersection=function(a,s,l,u){if(u==null)return this.getIntersection2(a,s,l);var h=a.x,f=a.y,d=s.x,p=s.y,m=l.x,g=l.y,y=u.x,v=u.y,x=void 0,b=void 0,w=void 0,C=void 0,T=void 0,E=void 0,A=void 0,S=void 0,_=void 0;return w=p-f,T=h-d,A=d*f-h*p,C=v-g,E=m-y,S=y*g-m*v,_=w*E-C*T,_===0?null:(x=(T*S-E*A)/_,b=(C*A-w*S)/_,new n(x,b))},i.angleOfVector=function(a,s,l,u){var h=void 0;return a!==l?(h=Math.atan((u-s)/(l-a)),l=0){var v=(-m+Math.sqrt(m*m-4*p*g))/(2*p),x=(-m-Math.sqrt(m*m-4*p*g))/(2*p),b=null;return v>=0&&v<=1?[v]:x>=0&&x<=1?[x]:b}else return null},i.HALF_PI=.5*Math.PI,i.ONE_AND_HALF_PI=1.5*Math.PI,i.TWO_PI=2*Math.PI,i.THREE_PI=3*Math.PI,t.exports=i},function(t,e,r){"use strict";function n(){}o(n,"IMath"),n.sign=function(i){return i>0?1:i<0?-1:0},n.floor=function(i){return i<0?Math.ceil(i):Math.floor(i)},n.ceil=function(i){return i<0?Math.floor(i):Math.ceil(i)},t.exports=n},function(t,e,r){"use strict";function n(){}o(n,"Integer"),n.MAX_VALUE=2147483647,n.MIN_VALUE=-2147483648,t.exports=n},function(t,e,r){"use strict";var n=function(){function h(f,d){for(var p=0;p"u"?"undefined":n(a);return a==null||s!="object"&&s!="function"},t.exports=i},function(t,e,r){"use strict";function n(m){if(Array.isArray(m)){for(var g=0,y=Array(m.length);g0&&g;){for(w.push(T[0]);w.length>0&&g;){var E=w[0];w.splice(0,1),b.add(E);for(var A=E.getEdges(),x=0;x-1&&T.splice(D,1)}b=new Set,C=new Map}}return m},p.prototype.createDummyNodesForBendpoints=function(m){for(var g=[],y=m.source,v=this.graphManager.calcLowestCommonAncestor(m.source,m.target),x=0;x0){for(var v=this.edgeToDummyNodes.get(y),x=0;x=0&&g.splice(S,1);var _=C.getNeighborsList();_.forEach(function(k){if(y.indexOf(k)<0){var L=v.get(k),R=L-1;R==1&&E.push(k),v.set(k,R)}})}y=y.concat(E),(g.length==1||g.length==2)&&(x=!0,b=g[0])}return b},p.prototype.setGraphManager=function(m){this.graphManager=m},t.exports=p},function(t,e,r){"use strict";function n(){}o(n,"RandomSeed"),n.seed=1,n.x=0,n.nextDouble=function(){return n.x=Math.sin(n.seed++)*1e4,n.x-Math.floor(n.x)},t.exports=n},function(t,e,r){"use strict";var n=r(5);function i(a,s){this.lworldOrgX=0,this.lworldOrgY=0,this.ldeviceOrgX=0,this.ldeviceOrgY=0,this.lworldExtX=1,this.lworldExtY=1,this.ldeviceExtX=1,this.ldeviceExtY=1}o(i,"Transform"),i.prototype.getWorldOrgX=function(){return this.lworldOrgX},i.prototype.setWorldOrgX=function(a){this.lworldOrgX=a},i.prototype.getWorldOrgY=function(){return this.lworldOrgY},i.prototype.setWorldOrgY=function(a){this.lworldOrgY=a},i.prototype.getWorldExtX=function(){return this.lworldExtX},i.prototype.setWorldExtX=function(a){this.lworldExtX=a},i.prototype.getWorldExtY=function(){return this.lworldExtY},i.prototype.setWorldExtY=function(a){this.lworldExtY=a},i.prototype.getDeviceOrgX=function(){return this.ldeviceOrgX},i.prototype.setDeviceOrgX=function(a){this.ldeviceOrgX=a},i.prototype.getDeviceOrgY=function(){return this.ldeviceOrgY},i.prototype.setDeviceOrgY=function(a){this.ldeviceOrgY=a},i.prototype.getDeviceExtX=function(){return this.ldeviceExtX},i.prototype.setDeviceExtX=function(a){this.ldeviceExtX=a},i.prototype.getDeviceExtY=function(){return this.ldeviceExtY},i.prototype.setDeviceExtY=function(a){this.ldeviceExtY=a},i.prototype.transformX=function(a){var s=0,l=this.lworldExtX;return l!=0&&(s=this.ldeviceOrgX+(a-this.lworldOrgX)*this.ldeviceExtX/l),s},i.prototype.transformY=function(a){var s=0,l=this.lworldExtY;return l!=0&&(s=this.ldeviceOrgY+(a-this.lworldOrgY)*this.ldeviceExtY/l),s},i.prototype.inverseTransformX=function(a){var s=0,l=this.ldeviceExtX;return l!=0&&(s=this.lworldOrgX+(a-this.ldeviceOrgX)*this.lworldExtX/l),s},i.prototype.inverseTransformY=function(a){var s=0,l=this.ldeviceExtY;return l!=0&&(s=this.lworldOrgY+(a-this.ldeviceOrgY)*this.lworldExtY/l),s},i.prototype.inverseTransformPoint=function(a){var s=new n(this.inverseTransformX(a.x),this.inverseTransformY(a.y));return s},t.exports=i},function(t,e,r){"use strict";function n(d){if(Array.isArray(d)){for(var p=0,m=Array(d.length);pa.ADAPTATION_LOWER_NODE_LIMIT&&(this.coolingFactor=Math.max(this.coolingFactor*a.COOLING_ADAPTATION_FACTOR,this.coolingFactor-(d-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*this.coolingFactor*(1-a.COOLING_ADAPTATION_FACTOR))),this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT_INCREMENTAL):(d>a.ADAPTATION_LOWER_NODE_LIMIT?this.coolingFactor=Math.max(a.COOLING_ADAPTATION_FACTOR,1-(d-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*(1-a.COOLING_ADAPTATION_FACTOR)):this.coolingFactor=1,this.initialCoolingFactor=this.coolingFactor,this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT),this.maxIterations=Math.max(this.getAllNodes().length*5,this.maxIterations),this.displacementThresholdPerNode=3*a.DEFAULT_EDGE_LENGTH/100,this.totalDisplacementThreshold=this.displacementThresholdPerNode*this.getAllNodes().length,this.repulsionRange=this.calcRepulsionRange()},h.prototype.calcSpringForces=function(){for(var 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n(){}o(n,"SVD"),n.svd=function(i){this.U=null,this.V=null,this.s=null,this.m=0,this.n=0,this.m=i.length,this.n=i[0].length;var a=Math.min(this.m,this.n);this.s=function(xt){for(var ut=[];xt-- >0;)ut.push(0);return ut}(Math.min(this.m+1,this.n)),this.U=function(xt){var ut=o(function Et(ft){if(ft.length==0)return 0;for(var yt=[],nt=0;nt0;)ut.push(0);return ut}(this.n),l=function(xt){for(var ut=[];xt-- >0;)ut.push(0);return ut}(this.m),u=!0,h=!0,f=Math.min(this.m-1,this.n),d=Math.max(0,Math.min(this.n-2,this.m)),p=0;p=0;M--)if(this.s[M]!==0){for(var B=M+1;B=0;j--){if(function(xt,ut){return xt&&ut}(j0;){var ue=void 0,Z=void 0;for(ue=L-2;ue>=-1&&ue!==-1;ue--)if(Math.abs(s[ue])<=se+J*(Math.abs(this.s[ue])+Math.abs(this.s[ue+1]))){s[ue]=0;break}if(ue===L-2)Z=4;else{var Se=void 0;for(Se=L-1;Se>=ue&&Se!==ue;Se--){var ce=(Se!==L?Math.abs(s[Se]):0)+(Se!==ue+1?Math.abs(s[Se-1]):0);if(Math.abs(this.s[Se])<=se+J*ce){this.s[Se]=0;break}}Se===ue?Z=3:Se===L-1?Z=1:(Z=2,ue=Se)}switch(ue++,Z){case 1:{var ae=s[L-2];s[L-2]=0;for(var Oe=L-2;Oe>=ue;Oe--){var ge=n.hypot(this.s[Oe],ae),ze=this.s[Oe]/ge,He=ae/ge;if(this.s[Oe]=ge,Oe!==ue&&(ae=-He*s[Oe-1],s[Oe-1]=ze*s[Oe-1]),h)for(var $e=0;$e=this.s[ue+1]);){var ot=this.s[ue];if(this.s[ue]=this.s[ue+1],this.s[ue+1]=ot,h&&ueMath.abs(a)?(s=a/i,s=Math.abs(i)*Math.sqrt(1+s*s)):a!=0?(s=i/a,s=Math.abs(a)*Math.sqrt(1+s*s)):s=0,s},t.exports=n},function(t,e,r){"use strict";var n=function(){function s(l,u){for(var h=0;h2&&arguments[2]!==void 0?arguments[2]:1,f=arguments.length>3&&arguments[3]!==void 0?arguments[3]:-1,d=arguments.length>4&&arguments[4]!==void 0?arguments[4]:-1;i(this,s),this.sequence1=l,this.sequence2=u,this.match_score=h,this.mismatch_penalty=f,this.gap_penalty=d,this.iMax=l.length+1,this.jMax=u.length+1,this.grid=new Array(this.iMax);for(var p=0;p=0;l--){var u=this.listeners[l];u.event===a&&u.callback===s&&this.listeners.splice(l,1)}},i.emit=function(a,s){for(var l=0;l{"use strict";o(function(e,r){typeof k4=="object"&&typeof pF=="object"?pF.exports=r(dF()):typeof define=="function"&&define.amd?define(["layout-base"],r):typeof k4=="object"?k4.coseBase=r(dF()):e.coseBase=r(e.layoutBase)},"webpackUniversalModuleDefinition")(k4,function(t){return(()=>{"use strict";var e={45:(a,s,l)=>{var u={};u.layoutBase=l(551),u.CoSEConstants=l(806),u.CoSEEdge=l(767),u.CoSEGraph=l(880),u.CoSEGraphManager=l(578),u.CoSELayout=l(765),u.CoSENode=l(991),u.ConstraintHandler=l(902),a.exports=u},806:(a,s,l)=>{var u=l(551).FDLayoutConstants;function h(){}o(h,"CoSEConstants");for(var f in u)h[f]=u[f];h.DEFAULT_USE_MULTI_LEVEL_SCALING=!1,h.DEFAULT_RADIAL_SEPARATION=u.DEFAULT_EDGE_LENGTH,h.DEFAULT_COMPONENT_SEPERATION=60,h.TILE=!0,h.TILING_PADDING_VERTICAL=10,h.TILING_PADDING_HORIZONTAL=10,h.TRANSFORM_ON_CONSTRAINT_HANDLING=!0,h.ENFORCE_CONSTRAINTS=!0,h.APPLY_LAYOUT=!0,h.RELAX_MOVEMENT_ON_CONSTRAINTS=!0,h.TREE_REDUCTION_ON_INCREMENTAL=!0,h.PURE_INCREMENTAL=h.DEFAULT_INCREMENTAL,a.exports=h},767:(a,s,l)=>{var u=l(551).FDLayoutEdge;function h(d,p,m){u.call(this,d,p,m)}o(h,"CoSEEdge"),h.prototype=Object.create(u.prototype);for(var f in u)h[f]=u[f];a.exports=h},880:(a,s,l)=>{var u=l(551).LGraph;function h(d,p,m){u.call(this,d,p,m)}o(h,"CoSEGraph"),h.prototype=Object.create(u.prototype);for(var f in u)h[f]=u[f];a.exports=h},578:(a,s,l)=>{var u=l(551).LGraphManager;function h(d){u.call(this,d)}o(h,"CoSEGraphManager"),h.prototype=Object.create(u.prototype);for(var f in u)h[f]=u[f];a.exports=h},765:(a,s,l)=>{var u=l(551).FDLayout,h=l(578),f=l(880),d=l(991),p=l(767),m=l(806),g=l(902),y=l(551).FDLayoutConstants,v=l(551).LayoutConstants,x=l(551).Point,b=l(551).PointD,w=l(551).DimensionD,C=l(551).Layout,T=l(551).Integer,E=l(551).IGeometry,A=l(551).LGraph,S=l(551).Transform,_=l(551).LinkedList;function I(){u.call(this),this.toBeTiled={},this.constraints={}}o(I,"CoSELayout"),I.prototype=Object.create(u.prototype);for(var D in u)I[D]=u[D];I.prototype.newGraphManager=function(){var k=new h(this);return this.graphManager=k,k},I.prototype.newGraph=function(k){return new f(null,this.graphManager,k)},I.prototype.newNode=function(k){return new d(this.graphManager,k)},I.prototype.newEdge=function(k){return new p(null,null,k)},I.prototype.initParameters=function(){u.prototype.initParameters.call(this,arguments),this.isSubLayout||(m.DEFAULT_EDGE_LENGTH<10?this.idealEdgeLength=10:this.idealEdgeLength=m.DEFAULT_EDGE_LENGTH,this.useSmartIdealEdgeLengthCalculation=m.DEFAULT_USE_SMART_IDEAL_EDGE_LENGTH_CALCULATION,this.gravityConstant=y.DEFAULT_GRAVITY_STRENGTH,this.compoundGravityConstant=y.DEFAULT_COMPOUND_GRAVITY_STRENGTH,this.gravityRangeFactor=y.DEFAULT_GRAVITY_RANGE_FACTOR,this.compoundGravityRangeFactor=y.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR,this.prunedNodesAll=[],this.growTreeIterations=0,this.afterGrowthIterations=0,this.isTreeGrowing=!1,this.isGrowthFinished=!1)},I.prototype.initSpringEmbedder=function(){u.prototype.initSpringEmbedder.call(this),this.coolingCycle=0,this.maxCoolingCycle=this.maxIterations/y.CONVERGENCE_CHECK_PERIOD,this.finalTemperature=.04,this.coolingAdjuster=1},I.prototype.layout=function(){var k=v.DEFAULT_CREATE_BENDS_AS_NEEDED;return k&&(this.createBendpoints(),this.graphManager.resetAllEdges()),this.level=0,this.classicLayout()},I.prototype.classicLayout=function(){if(this.nodesWithGravity=this.calculateNodesToApplyGravitationTo(),this.graphManager.setAllNodesToApplyGravitation(this.nodesWithGravity),this.calcNoOfChildrenForAllNodes(),this.graphManager.calcLowestCommonAncestors(),this.graphManager.calcInclusionTreeDepths(),this.graphManager.getRoot().calcEstimatedSize(),this.calcIdealEdgeLengths(),this.incremental){if(m.TREE_REDUCTION_ON_INCREMENTAL){this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var L=new Set(this.getAllNodes()),R=this.nodesWithGravity.filter(function(B){return L.has(B)});this.graphManager.setAllNodesToApplyGravitation(R)}}else{var k=this.getFlatForest();if(k.length>0)this.positionNodesRadially(k);else{this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var L=new Set(this.getAllNodes()),R=this.nodesWithGravity.filter(function(O){return L.has(O)});this.graphManager.setAllNodesToApplyGravitation(R),this.positionNodesRandomly()}}return Object.keys(this.constraints).length>0&&(g.handleConstraints(this),this.initConstraintVariables()),this.initSpringEmbedder(),m.APPLY_LAYOUT&&this.runSpringEmbedder(),!0},I.prototype.tick=function(){if(this.totalIterations++,this.totalIterations===this.maxIterations&&!this.isTreeGrowing&&!this.isGrowthFinished)if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;if(this.totalIterations%y.CONVERGENCE_CHECK_PERIOD==0&&!this.isTreeGrowing&&!this.isGrowthFinished){if(this.isConverged())if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;this.coolingCycle++,this.layoutQuality==0?this.coolingAdjuster=this.coolingCycle:this.layoutQuality==1&&(this.coolingAdjuster=this.coolingCycle/3),this.coolingFactor=Math.max(this.initialCoolingFactor-Math.pow(this.coolingCycle,Math.log(100*(this.initialCoolingFactor-this.finalTemperature))/Math.log(this.maxCoolingCycle))/100*this.coolingAdjuster,this.finalTemperature),this.animationPeriod=Math.ceil(this.initialAnimationPeriod*Math.sqrt(this.coolingFactor))}if(this.isTreeGrowing){if(this.growTreeIterations%10==0)if(this.prunedNodesAll.length>0){this.graphManager.updateBounds(),this.updateGrid(),this.growTree(this.prunedNodesAll),this.graphManager.resetAllNodesToApplyGravitation();var k=new Set(this.getAllNodes()),L=this.nodesWithGravity.filter(function(M){return k.has(M)});this.graphManager.setAllNodesToApplyGravitation(L),this.graphManager.updateBounds(),this.updateGrid(),m.PURE_INCREMENTAL?this.coolingFactor=y.DEFAULT_COOLING_FACTOR_INCREMENTAL/2:this.coolingFactor=y.DEFAULT_COOLING_FACTOR_INCREMENTAL}else this.isTreeGrowing=!1,this.isGrowthFinished=!0;this.growTreeIterations++}if(this.isGrowthFinished){if(this.isConverged())return!0;this.afterGrowthIterations%10==0&&(this.graphManager.updateBounds(),this.updateGrid()),m.PURE_INCREMENTAL?this.coolingFactor=y.DEFAULT_COOLING_FACTOR_INCREMENTAL/2*((100-this.afterGrowthIterations)/100):this.coolingFactor=y.DEFAULT_COOLING_FACTOR_INCREMENTAL*((100-this.afterGrowthIterations)/100),this.afterGrowthIterations++}var R=!this.isTreeGrowing&&!this.isGrowthFinished,O=this.growTreeIterations%10==1&&this.isTreeGrowing||this.afterGrowthIterations%10==1&&this.isGrowthFinished;return this.totalDisplacement=0,this.graphManager.updateBounds(),this.calcSpringForces(),this.calcRepulsionForces(R,O),this.calcGravitationalForces(),this.moveNodes(),this.animate(),!1},I.prototype.getPositionsData=function(){for(var k=this.graphManager.getAllNodes(),L={},R=0;R0&&this.updateDisplacements();for(var R=0;R0&&(O.fixedNodeWeight=B)}}if(this.constraints.relativePlacementConstraint){var F=new Map,P=new Map;if(this.dummyToNodeForVerticalAlignment=new Map,this.dummyToNodeForHorizontalAlignment=new Map,this.fixedNodesOnHorizontal=new Set,this.fixedNodesOnVertical=new Set,this.fixedNodeSet.forEach(function(le){k.fixedNodesOnHorizontal.add(le),k.fixedNodesOnVertical.add(le)}),this.constraints.alignmentConstraint){if(this.constraints.alignmentConstraint.vertical)for(var z=this.constraints.alignmentConstraint.vertical,R=0;R=2*le.length/3;X--)he=Math.floor(Math.random()*(X+1)),K=le[X],le[X]=le[he],le[he]=K;return le},this.nodesInRelativeHorizontal=[],this.nodesInRelativeVertical=[],this.nodeToRelativeConstraintMapHorizontal=new Map,this.nodeToRelativeConstraintMapVertical=new Map,this.nodeToTempPositionMapHorizontal=new Map,this.nodeToTempPositionMapVertical=new Map,this.constraints.relativePlacementConstraint.forEach(function(le){if(le.left){var he=F.has(le.left)?F.get(le.left):le.left,K=F.has(le.right)?F.get(le.right):le.right;k.nodesInRelativeHorizontal.includes(he)||(k.nodesInRelativeHorizontal.push(he),k.nodeToRelativeConstraintMapHorizontal.set(he,[]),k.dummyToNodeForVerticalAlignment.has(he)?k.nodeToTempPositionMapHorizontal.set(he,k.idToNodeMap.get(k.dummyToNodeForVerticalAlignment.get(he)[0]).getCenterX()):k.nodeToTempPositionMapHorizontal.set(he,k.idToNodeMap.get(he).getCenterX())),k.nodesInRelativeHorizontal.includes(K)||(k.nodesInRelativeHorizontal.push(K),k.nodeToRelativeConstraintMapHorizontal.set(K,[]),k.dummyToNodeForVerticalAlignment.has(K)?k.nodeToTempPositionMapHorizontal.set(K,k.idToNodeMap.get(k.dummyToNodeForVerticalAlignment.get(K)[0]).getCenterX()):k.nodeToTempPositionMapHorizontal.set(K,k.idToNodeMap.get(K).getCenterX())),k.nodeToRelativeConstraintMapHorizontal.get(he).push({right:K,gap:le.gap}),k.nodeToRelativeConstraintMapHorizontal.get(K).push({left:he,gap:le.gap})}else{var X=P.has(le.top)?P.get(le.top):le.top,te=P.has(le.bottom)?P.get(le.bottom):le.bottom;k.nodesInRelativeVertical.includes(X)||(k.nodesInRelativeVertical.push(X),k.nodeToRelativeConstraintMapVertical.set(X,[]),k.dummyToNodeForHorizontalAlignment.has(X)?k.nodeToTempPositionMapVertical.set(X,k.idToNodeMap.get(k.dummyToNodeForHorizontalAlignment.get(X)[0]).getCenterY()):k.nodeToTempPositionMapVertical.set(X,k.idToNodeMap.get(X).getCenterY())),k.nodesInRelativeVertical.includes(te)||(k.nodesInRelativeVertical.push(te),k.nodeToRelativeConstraintMapVertical.set(te,[]),k.dummyToNodeForHorizontalAlignment.has(te)?k.nodeToTempPositionMapVertical.set(te,k.idToNodeMap.get(k.dummyToNodeForHorizontalAlignment.get(te)[0]).getCenterY()):k.nodeToTempPositionMapVertical.set(te,k.idToNodeMap.get(te).getCenterY())),k.nodeToRelativeConstraintMapVertical.get(X).push({bottom:te,gap:le.gap}),k.nodeToRelativeConstraintMapVertical.get(te).push({top:X,gap:le.gap})}});else{var H=new Map,Q=new Map;this.constraints.relativePlacementConstraint.forEach(function(le){if(le.left){var he=F.has(le.left)?F.get(le.left):le.left,K=F.has(le.right)?F.get(le.right):le.right;H.has(he)?H.get(he).push(K):H.set(he,[K]),H.has(K)?H.get(K).push(he):H.set(K,[he])}else{var X=P.has(le.top)?P.get(le.top):le.top,te=P.has(le.bottom)?P.get(le.bottom):le.bottom;Q.has(X)?Q.get(X).push(te):Q.set(X,[te]),Q.has(te)?Q.get(te).push(X):Q.set(te,[X])}});var j=o(function(he,K){var X=[],te=[],J=new _,se=new Set,ue=0;return he.forEach(function(Z,Se){if(!se.has(Se)){X[ue]=[],te[ue]=!1;var ce=Se;for(J.push(ce),se.add(ce),X[ue].push(ce);J.length!=0;){ce=J.shift(),K.has(ce)&&(te[ue]=!0);var ae=he.get(ce);ae.forEach(function(Oe){se.has(Oe)||(J.push(Oe),se.add(Oe),X[ue].push(Oe))})}ue++}}),{components:X,isFixed:te}},"constructComponents"),ie=j(H,k.fixedNodesOnHorizontal);this.componentsOnHorizontal=ie.components,this.fixedComponentsOnHorizontal=ie.isFixed;var ne=j(Q,k.fixedNodesOnVertical);this.componentsOnVertical=ne.components,this.fixedComponentsOnVertical=ne.isFixed}}},I.prototype.updateDisplacements=function(){var k=this;if(this.constraints.fixedNodeConstraint&&this.constraints.fixedNodeConstraint.forEach(function(ne){var le=k.idToNodeMap.get(ne.nodeId);le.displacementX=0,le.displacementY=0}),this.constraints.alignmentConstraint){if(this.constraints.alignmentConstraint.vertical)for(var L=this.constraints.alignmentConstraint.vertical,R=0;R1){var P;for(P=0;PO&&(O=Math.floor(F.y)),B=Math.floor(F.x+m.DEFAULT_COMPONENT_SEPERATION)}this.transform(new b(v.WORLD_CENTER_X-F.x/2,v.WORLD_CENTER_Y-F.y/2))},I.radialLayout=function(k,L,R){var O=Math.max(this.maxDiagonalInTree(k),m.DEFAULT_RADIAL_SEPARATION);I.branchRadialLayout(L,null,0,359,0,O);var M=A.calculateBounds(k),B=new S;B.setDeviceOrgX(M.getMinX()),B.setDeviceOrgY(M.getMinY()),B.setWorldOrgX(R.x),B.setWorldOrgY(R.y);for(var F=0;F1;){var X=K[0];K.splice(0,1);var te=j.indexOf(X);te>=0&&j.splice(te,1),le--,ie--}L!=null?he=(j.indexOf(K[0])+1)%le:he=0;for(var J=Math.abs(O-R)/ie,se=he;ne!=ie;se=++se%le){var ue=j[se].getOtherEnd(k);if(ue!=L){var Z=(R+ne*J)%360,Se=(Z+J)%360;I.branchRadialLayout(ue,k,Z,Se,M+B,B),ne++}}},I.maxDiagonalInTree=function(k){for(var L=T.MIN_VALUE,R=0;RL&&(L=M)}return L},I.prototype.calcRepulsionRange=function(){return 2*(this.level+1)*this.idealEdgeLength},I.prototype.groupZeroDegreeMembers=function(){var k=this,L={};this.memberGroups={},this.idToDummyNode={};for(var R=[],O=this.graphManager.getAllNodes(),M=0;M"u"&&(L[P]=[]),L[P]=L[P].concat(B)}Object.keys(L).forEach(function(z){if(L[z].length>1){var $="DummyCompound_"+z;k.memberGroups[$]=L[z];var H=L[z][0].getParent(),Q=new d(k.graphManager);Q.id=$,Q.paddingLeft=H.paddingLeft||0,Q.paddingRight=H.paddingRight||0,Q.paddingBottom=H.paddingBottom||0,Q.paddingTop=H.paddingTop||0,k.idToDummyNode[$]=Q;var j=k.getGraphManager().add(k.newGraph(),Q),ie=H.getChild();ie.add(Q);for(var ne=0;neM?(O.rect.x-=(O.labelWidth-M)/2,O.setWidth(O.labelWidth),O.labelMarginLeft=(O.labelWidth-M)/2):O.labelPosHorizontal=="right"&&O.setWidth(M+O.labelWidth)),O.labelHeight&&(O.labelPosVertical=="top"?(O.rect.y-=O.labelHeight,O.setHeight(B+O.labelHeight),O.labelMarginTop=O.labelHeight):O.labelPosVertical=="center"&&O.labelHeight>B?(O.rect.y-=(O.labelHeight-B)/2,O.setHeight(O.labelHeight),O.labelMarginTop=(O.labelHeight-B)/2):O.labelPosVertical=="bottom"&&O.setHeight(B+O.labelHeight))}})},I.prototype.repopulateCompounds=function(){for(var k=this.compoundOrder.length-1;k>=0;k--){var L=this.compoundOrder[k],R=L.id,O=L.paddingLeft,M=L.paddingTop,B=L.labelMarginLeft,F=L.labelMarginTop;this.adjustLocations(this.tiledMemberPack[R],L.rect.x,L.rect.y,O,M,B,F)}},I.prototype.repopulateZeroDegreeMembers=function(){var k=this,L=this.tiledZeroDegreePack;Object.keys(L).forEach(function(R){var O=k.idToDummyNode[R],M=O.paddingLeft,B=O.paddingTop,F=O.labelMarginLeft,P=O.labelMarginTop;k.adjustLocations(L[R],O.rect.x,O.rect.y,M,B,F,P)})},I.prototype.getToBeTiled=function(k){var L=k.id;if(this.toBeTiled[L]!=null)return this.toBeTiled[L];var R=k.getChild();if(R==null)return this.toBeTiled[L]=!1,!1;for(var O=R.getNodes(),M=0;M0)return this.toBeTiled[L]=!1,!1;if(B.getChild()==null){this.toBeTiled[B.id]=!1;continue}if(!this.getToBeTiled(B))return this.toBeTiled[L]=!1,!1}return this.toBeTiled[L]=!0,!0},I.prototype.getNodeDegree=function(k){for(var L=k.id,R=k.getEdges(),O=0,M=0;MH&&(H=j.rect.height)}R+=H+k.verticalPadding}},I.prototype.tileCompoundMembers=function(k,L){var R=this;this.tiledMemberPack=[],Object.keys(k).forEach(function(O){var M=L[O];if(R.tiledMemberPack[O]=R.tileNodes(k[O],M.paddingLeft+M.paddingRight),M.rect.width=R.tiledMemberPack[O].width,M.rect.height=R.tiledMemberPack[O].height,M.setCenter(R.tiledMemberPack[O].centerX,R.tiledMemberPack[O].centerY),M.labelMarginLeft=0,M.labelMarginTop=0,m.NODE_DIMENSIONS_INCLUDE_LABELS){var B=M.rect.width,F=M.rect.height;M.labelWidth&&(M.labelPosHorizontal=="left"?(M.rect.x-=M.labelWidth,M.setWidth(B+M.labelWidth),M.labelMarginLeft=M.labelWidth):M.labelPosHorizontal=="center"&&M.labelWidth>B?(M.rect.x-=(M.labelWidth-B)/2,M.setWidth(M.labelWidth),M.labelMarginLeft=(M.labelWidth-B)/2):M.labelPosHorizontal=="right"&&M.setWidth(B+M.labelWidth)),M.labelHeight&&(M.labelPosVertical=="top"?(M.rect.y-=M.labelHeight,M.setHeight(F+M.labelHeight),M.labelMarginTop=M.labelHeight):M.labelPosVertical=="center"&&M.labelHeight>F?(M.rect.y-=(M.labelHeight-F)/2,M.setHeight(M.labelHeight),M.labelMarginTop=(M.labelHeight-F)/2):M.labelPosVertical=="bottom"&&M.setHeight(F+M.labelHeight))}})},I.prototype.tileNodes=function(k,L){var R=this.tileNodesByFavoringDim(k,L,!0),O=this.tileNodesByFavoringDim(k,L,!1),M=this.getOrgRatio(R),B=this.getOrgRatio(O),F;return BP&&(P=ne.getWidth())});var z=B/M,$=F/M,H=Math.pow(R-O,2)+4*(z+O)*($+R)*M,Q=(O-R+Math.sqrt(H))/(2*(z+O)),j;L?(j=Math.ceil(Q),j==Q&&j++):j=Math.floor(Q);var ie=j*(z+O)-O;return P>ie&&(ie=P),ie+=O*2,ie},I.prototype.tileNodesByFavoringDim=function(k,L,R){var O=m.TILING_PADDING_VERTICAL,M=m.TILING_PADDING_HORIZONTAL,B=m.TILING_COMPARE_BY,F={rows:[],rowWidth:[],rowHeight:[],width:0,height:L,verticalPadding:O,horizontalPadding:M,centerX:0,centerY:0};B&&(F.idealRowWidth=this.calcIdealRowWidth(k,R));var P=o(function(le){return le.rect.width*le.rect.height},"getNodeArea"),z=o(function(le,he){return P(he)-P(le)},"areaCompareFcn");k.sort(function(ne,le){var he=z;return F.idealRowWidth?(he=B,he(ne.id,le.id)):he(ne,le)});for(var $=0,H=0,Q=0;Q0&&(F+=k.horizontalPadding),k.rowWidth[R]=F,k.width0&&(P+=k.verticalPadding);var z=0;P>k.rowHeight[R]&&(z=k.rowHeight[R],k.rowHeight[R]=P,z=k.rowHeight[R]-z),k.height+=z,k.rows[R].push(L)},I.prototype.getShortestRowIndex=function(k){for(var L=-1,R=Number.MAX_VALUE,O=0;OR&&(L=O,R=k.rowWidth[O]);return L},I.prototype.canAddHorizontal=function(k,L,R){if(k.idealRowWidth){var O=k.rows.length-1,M=k.rowWidth[O];return M+L+k.horizontalPadding<=k.idealRowWidth}var B=this.getShortestRowIndex(k);if(B<0)return!0;var F=k.rowWidth[B];if(F+k.horizontalPadding+L<=k.width)return!0;var P=0;k.rowHeight[B]0&&(P=R+k.verticalPadding-k.rowHeight[B]);var z;k.width-F>=L+k.horizontalPadding?z=(k.height+P)/(F+L+k.horizontalPadding):z=(k.height+P)/k.width,P=R+k.verticalPadding;var $;return k.widthB&&L!=R){O.splice(-1,1),k.rows[R].push(M),k.rowWidth[L]=k.rowWidth[L]-B,k.rowWidth[R]=k.rowWidth[R]+B,k.width=k.rowWidth[instance.getLongestRowIndex(k)];for(var F=Number.MIN_VALUE,P=0;PF&&(F=O[P].height);L>0&&(F+=k.verticalPadding);var z=k.rowHeight[L]+k.rowHeight[R];k.rowHeight[L]=F,k.rowHeight[R]0)for(var ie=M;ie<=B;ie++)j[0]+=this.grid[ie][F-1].length+this.grid[ie][F].length-1;if(B0)for(var ie=F;ie<=P;ie++)j[3]+=this.grid[M-1][ie].length+this.grid[M][ie].length-1;for(var ne=T.MAX_VALUE,le,he,K=0;K{var u=l(551).FDLayoutNode,h=l(551).IMath;function f(p,m,g,y){u.call(this,p,m,g,y)}o(f,"CoSENode"),f.prototype=Object.create(u.prototype);for(var d in u)f[d]=u[d];f.prototype.calculateDisplacement=function(){var p=this.graphManager.getLayout();this.getChild()!=null&&this.fixedNodeWeight?(this.displacementX+=p.coolingFactor*(this.springForceX+this.repulsionForceX+this.gravitationForceX)/this.fixedNodeWeight,this.displacementY+=p.coolingFactor*(this.springForceY+this.repulsionForceY+this.gravitationForceY)/this.fixedNodeWeight):(this.displacementX+=p.coolingFactor*(this.springForceX+this.repulsionForceX+this.gravitationForceX)/this.noOfChildren,this.displacementY+=p.coolingFactor*(this.springForceY+this.repulsionForceY+this.gravitationForceY)/this.noOfChildren),Math.abs(this.displacementX)>p.coolingFactor*p.maxNodeDisplacement&&(this.displacementX=p.coolingFactor*p.maxNodeDisplacement*h.sign(this.displacementX)),Math.abs(this.displacementY)>p.coolingFactor*p.maxNodeDisplacement&&(this.displacementY=p.coolingFactor*p.maxNodeDisplacement*h.sign(this.displacementY)),this.child&&this.child.getNodes().length>0&&this.propogateDisplacementToChildren(this.displacementX,this.displacementY)},f.prototype.propogateDisplacementToChildren=function(p,m){for(var g=this.getChild().getNodes(),y,v=0;v{function u(g){if(Array.isArray(g)){for(var y=0,v=Array(g.length);y0){var ct=0;Ue.forEach(function(ot){xe=="horizontal"?(we.set(ot,x.has(ot)?b[x.get(ot)]:pe.get(ot)),ct+=we.get(ot)):(we.set(ot,x.has(ot)?w[x.get(ot)]:pe.get(ot)),ct+=we.get(ot))}),ct=ct/Ue.length,st.forEach(function(ot){q.has(ot)||we.set(ot,ct)})}else{var We=0;st.forEach(function(ot){xe=="horizontal"?We+=x.has(ot)?b[x.get(ot)]:pe.get(ot):We+=x.has(ot)?w[x.get(ot)]:pe.get(ot)}),We=We/st.length,st.forEach(function(ot){we.set(ot,We)})}});for(var qe=o(function(){var Ue=De.shift(),ct=V.get(Ue);ct.forEach(function(We){if(we.get(We.id)ot&&(ot=yt),ntYt&&(Yt=nt)}}catch(At){Mt=!0,xt=At}finally{try{!bt&&ut.return&&ut.return()}finally{if(Mt)throw xt}}var dn=(ct+ot)/2-(We+Yt)/2,Tt=!0,On=!1,tn=void 0;try{for(var _r=st[Symbol.iterator](),Dr;!(Tt=(Dr=_r.next()).done);Tt=!0){var Pn=Dr.value;we.set(Pn,we.get(Pn)+dn)}}catch(At){On=!0,tn=At}finally{try{!Tt&&_r.return&&_r.return()}finally{if(On)throw tn}}})}return we},"findAppropriatePositionForRelativePlacement"),D=o(function(V){var xe=0,q=0,pe=0,ve=0;if(V.forEach(function(Ve){Ve.left?b[x.get(Ve.left)]-b[x.get(Ve.right)]>=0?xe++:q++:w[x.get(Ve.top)]-w[x.get(Ve.bottom)]>=0?pe++:ve++}),xe>q&&pe>ve)for(var Pe=0;Peq)for(var _e=0;_eve)for(var we=0;we1)y.fixedNodeConstraint.forEach(function(oe,V){O[V]=[oe.position.x,oe.position.y],M[V]=[b[x.get(oe.nodeId)],w[x.get(oe.nodeId)]]}),B=!0;else if(y.alignmentConstraint)(function(){var oe=0;if(y.alignmentConstraint.vertical){for(var V=y.alignmentConstraint.vertical,xe=o(function(we){var Ve=new Set;V[we].forEach(function(at){Ve.add(at)});var De=new Set([].concat(u(Ve)).filter(function(at){return P.has(at)})),qe=void 0;De.size>0?qe=b[x.get(De.values().next().value)]:qe=_(Ve).x,V[we].forEach(function(at){O[oe]=[qe,w[x.get(at)]],M[oe]=[b[x.get(at)],w[x.get(at)]],oe++})},"_loop2"),q=0;q0?qe=b[x.get(De.values().next().value)]:qe=_(Ve).y,pe[we].forEach(function(at){O[oe]=[b[x.get(at)],qe],M[oe]=[b[x.get(at)],w[x.get(at)]],oe++})},"_loop3"),Pe=0;PeQ&&(Q=H[ie].length,j=ie);if(Q<$.size/2)D(y.relativePlacementConstraint),B=!1,F=!1;else{var ne=new Map,le=new Map,he=[];H[j].forEach(function(oe){z.get(oe).forEach(function(V){V.direction=="horizontal"?(ne.has(oe)?ne.get(oe).push(V):ne.set(oe,[V]),ne.has(V.id)||ne.set(V.id,[]),he.push({left:oe,right:V.id})):(le.has(oe)?le.get(oe).push(V):le.set(oe,[V]),le.has(V.id)||le.set(V.id,[]),he.push({top:oe,bottom:V.id}))})}),D(he),F=!1;var K=I(ne,"horizontal"),X=I(le,"vertical");H[j].forEach(function(oe,V){M[V]=[b[x.get(oe)],w[x.get(oe)]],O[V]=[],K.has(oe)?O[V][0]=K.get(oe):O[V][0]=b[x.get(oe)],X.has(oe)?O[V][1]=X.get(oe):O[V][1]=w[x.get(oe)]}),B=!0}}if(B){for(var te=void 0,J=d.transpose(O),se=d.transpose(M),ue=0;ue0){var ze={x:0,y:0};y.fixedNodeConstraint.forEach(function(oe,V){var xe={x:b[x.get(oe.nodeId)],y:w[x.get(oe.nodeId)]},q=oe.position,pe=S(q,xe);ze.x+=pe.x,ze.y+=pe.y}),ze.x/=y.fixedNodeConstraint.length,ze.y/=y.fixedNodeConstraint.length,b.forEach(function(oe,V){b[V]+=ze.x}),w.forEach(function(oe,V){w[V]+=ze.y}),y.fixedNodeConstraint.forEach(function(oe){b[x.get(oe.nodeId)]=oe.position.x,w[x.get(oe.nodeId)]=oe.position.y})}if(y.alignmentConstraint){if(y.alignmentConstraint.vertical)for(var He=y.alignmentConstraint.vertical,$e=o(function(V){var xe=new Set;He[V].forEach(function(ve){xe.add(ve)});var q=new Set([].concat(u(xe)).filter(function(ve){return P.has(ve)})),pe=void 0;q.size>0?pe=b[x.get(q.values().next().value)]:pe=_(xe).x,xe.forEach(function(ve){P.has(ve)||(b[x.get(ve)]=pe)})},"_loop4"),Re=0;Re0?pe=w[x.get(q.values().next().value)]:pe=_(xe).y,xe.forEach(function(ve){P.has(ve)||(w[x.get(ve)]=pe)})},"_loop5"),W=0;W{a.exports=t}},r={};function n(a){var s=r[a];if(s!==void 0)return s.exports;var l=r[a]={exports:{}};return e[a](l,l.exports,n),l.exports}o(n,"__webpack_require__");var i=n(45);return i})()})});var Pve=Mi((E4,gF)=>{"use strict";o(function(e,r){typeof E4=="object"&&typeof gF=="object"?gF.exports=r(mF()):typeof define=="function"&&define.amd?define(["cose-base"],r):typeof E4=="object"?E4.cytoscapeFcose=r(mF()):e.cytoscapeFcose=r(e.coseBase)},"webpackUniversalModuleDefinition")(E4,function(t){return(()=>{"use strict";var e={658:a=>{a.exports=Object.assign!=null?Object.assign.bind(Object):function(s){for(var l=arguments.length,u=Array(l>1?l-1:0),h=1;h{var u=function(){function d(p,m){var g=[],y=!0,v=!1,x=void 0;try{for(var b=p[Symbol.iterator](),w;!(y=(w=b.next()).done)&&(g.push(w.value),!(m&&g.length===m));y=!0);}catch(C){v=!0,x=C}finally{try{!y&&b.return&&b.return()}finally{if(v)throw x}}return g}return o(d,"sliceIterator"),function(p,m){if(Array.isArray(p))return p;if(Symbol.iterator in Object(p))return d(p,m);throw new TypeError("Invalid attempt to destructure non-iterable instance")}}(),h=l(140).layoutBase.LinkedList,f={};f.getTopMostNodes=function(d){for(var p={},m=0;m0&&B.merge($)});for(var F=0;F1){w=x[0],C=w.connectedEdges().length,x.forEach(function(M){M.connectedEdges().length0&&g.set("dummy"+(g.size+1),A),S},f.relocateComponent=function(d,p,m){if(!m.fixedNodeConstraint){var g=Number.POSITIVE_INFINITY,y=Number.NEGATIVE_INFINITY,v=Number.POSITIVE_INFINITY,x=Number.NEGATIVE_INFINITY;if(m.quality=="draft"){var b=!0,w=!1,C=void 0;try{for(var T=p.nodeIndexes[Symbol.iterator](),E;!(b=(E=T.next()).done);b=!0){var A=E.value,S=u(A,2),_=S[0],I=S[1],D=m.cy.getElementById(_);if(D){var k=D.boundingBox(),L=p.xCoords[I]-k.w/2,R=p.xCoords[I]+k.w/2,O=p.yCoords[I]-k.h/2,M=p.yCoords[I]+k.h/2;Ly&&(y=R),Ox&&(x=M)}}}catch($){w=!0,C=$}finally{try{!b&&T.return&&T.return()}finally{if(w)throw C}}var B=d.x-(y+g)/2,F=d.y-(x+v)/2;p.xCoords=p.xCoords.map(function($){return $+B}),p.yCoords=p.yCoords.map(function($){return $+F})}else{Object.keys(p).forEach(function($){var H=p[$],Q=H.getRect().x,j=H.getRect().x+H.getRect().width,ie=H.getRect().y,ne=H.getRect().y+H.getRect().height;Qy&&(y=j),iex&&(x=ne)});var P=d.x-(y+g)/2,z=d.y-(x+v)/2;Object.keys(p).forEach(function($){var H=p[$];H.setCenter(H.getCenterX()+P,H.getCenterY()+z)})}}},f.calcBoundingBox=function(d,p,m,g){for(var y=Number.MAX_SAFE_INTEGER,v=Number.MIN_SAFE_INTEGER,x=Number.MAX_SAFE_INTEGER,b=Number.MIN_SAFE_INTEGER,w=void 0,C=void 0,T=void 0,E=void 0,A=d.descendants().not(":parent"),S=A.length,_=0;_w&&(y=w),vT&&(x=T),b{var u=l(548),h=l(140).CoSELayout,f=l(140).CoSENode,d=l(140).layoutBase.PointD,p=l(140).layoutBase.DimensionD,m=l(140).layoutBase.LayoutConstants,g=l(140).layoutBase.FDLayoutConstants,y=l(140).CoSEConstants,v=o(function(b,w){var C=b.cy,T=b.eles,E=T.nodes(),A=T.edges(),S=void 0,_=void 0,I=void 0,D={};b.randomize&&(S=w.nodeIndexes,_=w.xCoords,I=w.yCoords);var k=o(function($){return typeof $=="function"},"isFn"),L=o(function($,H){return k($)?$(H):$},"optFn"),R=u.calcParentsWithoutChildren(C,T),O=o(function z($,H,Q,j){for(var ie=H.length,ne=0;ne0){var J=void 0;J=Q.getGraphManager().add(Q.newGraph(),K),z(J,he,Q,j)}}},"processChildrenList"),M=o(function($,H,Q){for(var j=0,ie=0,ne=0;ne0?y.DEFAULT_EDGE_LENGTH=g.DEFAULT_EDGE_LENGTH=j/ie:k(b.idealEdgeLength)?y.DEFAULT_EDGE_LENGTH=g.DEFAULT_EDGE_LENGTH=50:y.DEFAULT_EDGE_LENGTH=g.DEFAULT_EDGE_LENGTH=b.idealEdgeLength,y.MIN_REPULSION_DIST=g.MIN_REPULSION_DIST=g.DEFAULT_EDGE_LENGTH/10,y.DEFAULT_RADIAL_SEPARATION=g.DEFAULT_EDGE_LENGTH)},"processEdges"),B=o(function($,H){H.fixedNodeConstraint&&($.constraints.fixedNodeConstraint=H.fixedNodeConstraint),H.alignmentConstraint&&($.constraints.alignmentConstraint=H.alignmentConstraint),H.relativePlacementConstraint&&($.constraints.relativePlacementConstraint=H.relativePlacementConstraint)},"processConstraints");b.nestingFactor!=null&&(y.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=g.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=b.nestingFactor),b.gravity!=null&&(y.DEFAULT_GRAVITY_STRENGTH=g.DEFAULT_GRAVITY_STRENGTH=b.gravity),b.numIter!=null&&(y.MAX_ITERATIONS=g.MAX_ITERATIONS=b.numIter),b.gravityRange!=null&&(y.DEFAULT_GRAVITY_RANGE_FACTOR=g.DEFAULT_GRAVITY_RANGE_FACTOR=b.gravityRange),b.gravityCompound!=null&&(y.DEFAULT_COMPOUND_GRAVITY_STRENGTH=g.DEFAULT_COMPOUND_GRAVITY_STRENGTH=b.gravityCompound),b.gravityRangeCompound!=null&&(y.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=g.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=b.gravityRangeCompound),b.initialEnergyOnIncremental!=null&&(y.DEFAULT_COOLING_FACTOR_INCREMENTAL=g.DEFAULT_COOLING_FACTOR_INCREMENTAL=b.initialEnergyOnIncremental),b.tilingCompareBy!=null&&(y.TILING_COMPARE_BY=b.tilingCompareBy),b.quality=="proof"?m.QUALITY=2:m.QUALITY=0,y.NODE_DIMENSIONS_INCLUDE_LABELS=g.NODE_DIMENSIONS_INCLUDE_LABELS=m.NODE_DIMENSIONS_INCLUDE_LABELS=b.nodeDimensionsIncludeLabels,y.DEFAULT_INCREMENTAL=g.DEFAULT_INCREMENTAL=m.DEFAULT_INCREMENTAL=!b.randomize,y.ANIMATE=g.ANIMATE=m.ANIMATE=b.animate,y.TILE=b.tile,y.TILING_PADDING_VERTICAL=typeof b.tilingPaddingVertical=="function"?b.tilingPaddingVertical.call():b.tilingPaddingVertical,y.TILING_PADDING_HORIZONTAL=typeof b.tilingPaddingHorizontal=="function"?b.tilingPaddingHorizontal.call():b.tilingPaddingHorizontal,y.DEFAULT_INCREMENTAL=g.DEFAULT_INCREMENTAL=m.DEFAULT_INCREMENTAL=!0,y.PURE_INCREMENTAL=!b.randomize,m.DEFAULT_UNIFORM_LEAF_NODE_SIZES=b.uniformNodeDimensions,b.step=="transformed"&&(y.TRANSFORM_ON_CONSTRAINT_HANDLING=!0,y.ENFORCE_CONSTRAINTS=!1,y.APPLY_LAYOUT=!1),b.step=="enforced"&&(y.TRANSFORM_ON_CONSTRAINT_HANDLING=!1,y.ENFORCE_CONSTRAINTS=!0,y.APPLY_LAYOUT=!1),b.step=="cose"&&(y.TRANSFORM_ON_CONSTRAINT_HANDLING=!1,y.ENFORCE_CONSTRAINTS=!1,y.APPLY_LAYOUT=!0),b.step=="all"&&(b.randomize?y.TRANSFORM_ON_CONSTRAINT_HANDLING=!0:y.TRANSFORM_ON_CONSTRAINT_HANDLING=!1,y.ENFORCE_CONSTRAINTS=!0,y.APPLY_LAYOUT=!0),b.fixedNodeConstraint||b.alignmentConstraint||b.relativePlacementConstraint?y.TREE_REDUCTION_ON_INCREMENTAL=!1:y.TREE_REDUCTION_ON_INCREMENTAL=!0;var F=new h,P=F.newGraphManager();return O(P.addRoot(),u.getTopMostNodes(E),F,b),M(F,P,A),B(F,b),F.runLayout(),D},"coseLayout");a.exports={coseLayout:v}},212:(a,s,l)=>{var u=function(){function b(w,C){for(var T=0;T0)if(M){var P=d.getTopMostNodes(T.eles.nodes());if(k=d.connectComponents(E,T.eles,P),k.forEach(function(ce){var ae=ce.boundingBox();L.push({x:ae.x1+ae.w/2,y:ae.y1+ae.h/2})}),T.randomize&&k.forEach(function(ce){T.eles=ce,S.push(m(T))}),T.quality=="default"||T.quality=="proof"){var z=E.collection();if(T.tile){var $=new Map,H=[],Q=[],j=0,ie={nodeIndexes:$,xCoords:H,yCoords:Q},ne=[];if(k.forEach(function(ce,ae){ce.edges().length==0&&(ce.nodes().forEach(function(Oe,ge){z.merge(ce.nodes()[ge]),Oe.isParent()||(ie.nodeIndexes.set(ce.nodes()[ge].id(),j++),ie.xCoords.push(ce.nodes()[0].position().x),ie.yCoords.push(ce.nodes()[0].position().y))}),ne.push(ae))}),z.length>1){var le=z.boundingBox();L.push({x:le.x1+le.w/2,y:le.y1+le.h/2}),k.push(z),S.push(ie);for(var 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D[ae][He.id()]&&ge.nodes.push({x:D[ae][He.id()].getLeft(),y:D[ae][He.id()].getTop(),width:D[ae][He.id()].getWidth(),height:D[ae][He.id()].getHeight()})}),ce.edges().forEach(function(He){var $e=He.source(),Re=He.target();if($e.css("display")!="none"&&Re.css("display")!="none")if(T.quality=="draft"){var Ie=Oe.get($e.id()),be=Oe.get(Re.id()),W=[],de=[];if($e.isParent()){var re=d.calcBoundingBox($e,S[ae].xCoords,S[ae].yCoords,Oe);W.push(re.topLeftX+re.width/2),W.push(re.topLeftY+re.height/2)}else W.push(S[ae].xCoords[Ie]),W.push(S[ae].yCoords[Ie]);if(Re.isParent()){var oe=d.calcBoundingBox(Re,S[ae].xCoords,S[ae].yCoords,Oe);de.push(oe.topLeftX+oe.width/2),de.push(oe.topLeftY+oe.height/2)}else de.push(S[ae].xCoords[be]),de.push(S[ae].yCoords[be]);ge.edges.push({startX:W[0],startY:W[1],endX:de[0],endY:de[1]})}else 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MIT License: http://en.wikipedia.org/wiki/MIT_License *) +*/ +globalThis.mermaid = globalThis.__esbuild_esm_mermaid.default; \ No newline at end of file diff --git a/srcDoc/manual.pdf b/srcDoc/manual.pdf deleted file mode 100644 index cf13e8da..00000000 Binary files a/srcDoc/manual.pdf and /dev/null differ diff --git a/srcDoc/manual.tex b/srcDoc/manual.tex deleted file mode 100644 index ef46890c..00000000 --- a/srcDoc/manual.tex +++ /dev/null @@ -1,87 +0,0 @@ -% Copyright (C) 2002 Regents of the University of Michigan, portions used with permission -% For more information, see http://csem.engin.umich.edu/tools/swmf -\documentclass[twoside,10pt]{book} -\usepackage{times} -\usepackage{graphicx} -\usepackage{alltt} -\usepackage{amsmath} -\usepackage{epsfig} -\usepackage{fancyhdr} -\usepackage[square]{natbib} -\usepackage{multicol} -\usepackage{subfigure} -\usepackage{fancyvrb} -\usepackage{color} - -% use these lengths for a more uniform margin -% this format is more pleasing for stapling -\setlength{\oddsidemargin}{-.1 in} -\setlength{\evensidemargin}{0.0 in} -\setlength{\textwidth}{6.5 in} -\setlength{\topmargin}{0 in} -\setlength{\textheight}{8.5 in} - -\renewcommand{\deg}{^{\circ}} - - -\title{GITM User Manual \\ \large Version 2.1} -\author{A.J. Ridley, A.G. Burrell} - -\begin{document} - -\pagestyle{fancy} -\lhead[\fancyplain{}{\bfseries\thepage}]{\fancyplain{}{\bfseries\rightmark}} -\rhead[\fancyplain{}{\bfseries\leftmark}]{\fancyplain{}{\bfseries\thepage}} -\cfoot{} - -%\pagestyle{headings} - -\maketitle - -\tableofcontents - -\clearpage - -%Chapter 1 -\chapter{Introduction to GITM} -\input{intro} -\label{intro.ch} - -\section{Code Outline} -\label{outline.sec} - -This is an outline of GITM. To produce this file, go into the {\tt src} directory, and type: - -\begin{verbatim} -cd ../src -./calling_sequence.pl > outline.tex -mv outline.tex ../srcDoc -cd ../srcDoc -\end{verbatim} - -\input{outline.tex} - -%Chapter 2 -\chapter{Getting Started} -\label{quickstart.ch} -\input{quickstart} - -%Chapter 3 -\chapter{Inputs} -\label{input.ch} -\input{set_inputs} -\input{grid} -\input{more_inputs} - -%Chapter 4 -\chapter{Outputs} -\label{outputs.ch} -\input{outputs} - -%Bibliography -\clearpage -\addcontentsline{toc}{chapter}{Bibliography} -\bibliographystyle{chicagoa} -\bibliography{gitm} - -\end{document} diff --git a/srcDoc/more_inputs.tex b/srcDoc/more_inputs.tex deleted file mode 100644 index bbf46230..00000000 --- a/srcDoc/more_inputs.tex +++ /dev/null @@ -1,209 +0,0 @@ -% Copyright (C) 2002 Regents of the University of Michigan, portions used with permission -% For more information, see http://csem.engin.umich.edu/tools/swmf - -\section{Auxiliary Input Files} -\label{aux.sec} - -If you have access to the University of Michigan Atmospheric, Oceanic, and Space Science resources, the data needed for these auxiliary input files are on {\tt herot.engin.umich.edu}. The following descriptions will allow you download to create your own auxiliary input files yourself, but this process is much more simple if you have access to the resources on {\tt herot}. Recall that {\tt makerun.pl}, previously mentioned at the beginning of section~\ref{uam.sec}, will create many of the following input files when it builds a {\tt UAM.in} file. All of these auxiliary input files should be kept in the same directory as the GITM executable and the {\tt UAM.in} file. - -\subsection{IMF and Solar Wind} -\label{imf.sec} - -This file controls the high-latitude electric field and aurora when using models that depend on the solar wind and interplanetary magnetic field (IMF). It allows GITM to dynamically control these quantities. You can create either realistic IMF files or hypothetical ones. - -For realistic IMF files, we typically use CDF files downloaded from the CDAWEB ftp site, located at:\\{\tt http://cdaweb.gsfc.nasa.gov/cdaweb\_anonymousftp.htm}. - -On {\tt herot}, an IDL code (called {\tt cdf\_to\_mhd.pro}) merges the solar wind and IMF files to create one single file. This IDL code also propagates the solar wind and IMF from L1 to 32 Re upstream of the Earth. You can use the {\tt DELAY} statement to shift the time more (e.g. in the example below, it shifts by an additional 15 minutes). {\tt cdf\_to\_mhd.pro} requires both a solar wind file and an IMF file. For example, the IMF file would be {\tt ac\_h0\_mfi\_20011231\_v04.cdf} and the solar wind file would be {\tt ac\_h0\_swe\_20011231\_v06.cdf}. The code assumes that the data starts at {\tt \#START}, and ends when it encounters an error. This can mean that if there is an error in the data somewhere, the code will only read up to that point. To validate that the solar wind and IMF is what you think it is, it is recommended that you use the IDL code {\tt imf\_plot.pro} to check the output before using it to run GITM. Here is an example file: - -\begin{verbatim} - -This file was created by Aaron Ridley to do some wicked cool science thing. - -The format is: - Year MM DD HH Mi SS mS Bx By Bz Vx Vy Vz N T - -Year=year -MM = Month -DD = Day -HH = Hour -Mi = Minute -SS = Second -mS = Millisecond -Bx = IMF Bx GSM Component (nT) -By = IMF By GSM Component (nT) -Bz = IMF Bz GSM Component (nT) -Vx = Solar Wind Vx (km/s) -Vy = Solar Wind Vy (km/s) -Vz = Solar Wind Vz (km/s) -N = Solar Wind Density (/cm3) -T = Solar Wind Temperature (K) - -#DELAY -900.0 - -#START - 2000 3 20 2 53 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 54 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 55 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 56 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 57 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 58 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 2 59 0 0 0.0 0.0 2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 3 0 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 3 1 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 3 2 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 3 3 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 - 2000 3 20 3 4 0 0 0.0 0.0 -2.0 -400.0 0.0 0.0 5.0 50000.0 -\end{verbatim} - -To actually read in this file, in {\tt UAM.in}, use the input option MHD\_INDICES described in section~\ref{indices.sec}. - -\subsection{Hemispheric Power} -\label{hp.sec} - -The hemispheric power files describe the dynamic variation of the auroral power going into each hemisphere. Models such as \cite{fuller87} use the Hemispheric Power to determine which level of the model it should use. The Hemispheric Power is converted to a Hemispheric Power Index using the -formula shown in equation~\ref{hp.eq}. - -\begin{equation} -\label{hp.eq} -HPI = 2.09 \log(HP)^{1.0475} -\end{equation} - -The National Oceanic and Atmospheric Administration (NOAA) provides these hemispheric power files for public use online at {\tt http://www.swpc.noaa.gov/ftpmenu/lists/hpi.html}. There are two types of formats used for hemispheric power files (due to a change in the NOAA output format in 2007). Both file formats can be used by GITM, and are shown in the examples below. - -Example file 1 for data prior to 2007: - -\begin{verbatim} -# Prepared by the U.S. Dept. of Commerce, NOAA, Space Environment Center. -# Please send comments and suggestions to sec@sec.noaa.gov -# -# Source: NOAA POES (Whatever is aloft) -# Units: gigawatts - -# Format: - -# The first line of data contains the four-digit year of the data. -# Each following line is formatted as in this example: - -# NOAA-12(S) 10031 9.0 4 .914 - -# Please note that if the first line of data in the file has a -# day-of-year of 365 (or 366) and a HHMM of greater than 2300, -# that polar pass started at the end of the previous year and -# ended on day-of-year 001 of the current year. - -# A7 NOAA POES Satellite number -# A3 (S) or (N) - hemisphere -# I3 Day of year -# I4 UT hour and minute -# F8.1 Estimated Hemispheric Power in gigawatts -# I3 Hemispheric Power Index (activity level) -# F8.3 Normalizing factor - -2000 -NOAA-15(N) 10023 35.5 7 1.085 -NOAA-14(S) 10044 25.3 7 .843 -NOAA-15(S) 10114 29.0 7 .676 -NOAA-14(N) 10135 108.7 10 1.682 -NOAA-15(N) 10204 36.4 7 1.311 -. -. -. -\end{verbatim} - -Example file 2 for data in and after 2007: - -\begin{verbatim} -:Data_list: power_2010.txt -:Created: Sun Jan 2 10:12:58 UTC 2011 - - -# Prepared by the U.S. Dept. of Commerce, NOAA, Space Environment Center. -# Please send comments and suggestions to sec@sec.noaa.gov -# -# Source: NOAA POES (Whatever is aloft) -# Units: gigawatts - -# Format: - -# Each line is formatted as in this example: - -# 2006-09-05 00:54:25 NOAA-16 (S) 7 29.67 0.82 - -# A19 Date and UT at the center of the polar pass as YYYY-MM-DD hh:mm:ss -# 1X (Space) -# A7 NOAA POES Satellite number -# 1X (Space) -# A3 (S) or (N) - hemisphere -# I3 Hemispheric Power Index (activity level) -# F7.2 Estimated Hemispheric Power in gigawatts -# F7.2 Normalizing factor - -2010-01-01 00:14:37 NOAA-17 (N) 1 1.45 1.16 -2010-01-01 00:44:33 NOAA-19 (N) 1 1.45 1.17 -. -. -. -\end{verbatim} - -This file is not specified in {\tt UAM.in}, instead different subroutines within GITM will use it as needed. - -\subsection{Solar Irradiance} -\label{solar_irradiance.sec} - -To provide GITM with realistic solar irradiance, the solar EUV must be specified. This can be done through a file containing modeled or observed solar irradiance data. An example from the FISM model is shown below. - -\begin{verbatim} -#START - 2009 3 20 0 0 0 0.00389548 0.00235693 - 0.00127776 0.000907677 0.000652528 0.000372993 0.000250124 0.000194781 - 0.000389686 0.000118650 0.00642058 0.00618358 0.000133490 7.67560e-05 - 7.80045e-05 0.000145722 5.92577e-05 5.95070e-05 0.000102437 6.48526e-05 - 8.94509e-05 0.000101928 5.94333e-05 5.36012e-05 1.51744e-05 1.10265e-05 - 1.26937e-05 2.16591e-05 9.57055e-06 1.82608e-05 7.07992e-05 2.55451e-05 - 1.12451e-05 6.89255e-05 3.03882e-05 2.33862e-05 2.98026e-05 4.44682e-05 - 1.50847e-05 3.00909e-05 8.18379e-05 3.52176e-05 0.000416491 0.000269080 - 0.000269080 0.000275734 6.60872e-05 4.46671e-05 0.000220697 0.000512933 - 3.85239e-05 9.30928e-05 2.71239e-05 1.23011e-05 1.05722e-05 9.30876e-06 - 7.08442e-07 3.54221e-07 1.77110e-07 - 2009 3 20 0 1 0 0.00389548 0.00235693 - 0.00127776 0.000907677 0.000652528 0.000372993 0.000250124 0.000194781 - 0.000389686 0.000118650 0.00642058 0.00618358 0.000133490 7.67560e-05 - 7.80045e-05 0.000145722 5.92577e-05 5.95070e-05 0.000102437 6.48526e-05 - 8.94509e-05 0.000101928 5.94333e-05 5.36012e-05 1.51744e-05 1.10265e-05 - 1.26937e-05 2.16591e-05 9.57055e-06 1.82608e-05 7.07992e-05 2.55451e-05 - 1.12451e-05 6.89255e-05 3.03882e-05 2.33862e-05 2.98026e-05 4.44682e-05 - 1.50847e-05 3.00909e-05 8.18379e-05 3.52176e-05 0.000416491 0.000269080 - 0.000269080 0.000275734 6.60872e-05 4.46671e-05 0.000220697 0.000512933 - 3.85239e-05 9.30928e-05 2.71239e-05 1.23011e-05 1.05722e-05 9.30876e-06 - 7.08442e-07 3.54221e-07 1.77110e-07 -. -. -. -\end{verbatim} - -GITM knows to use the provided solar irradiance file through the EUV\_DATA input option specified in the {\tt UAM.in} file. More information about this input option can be found in section~\ref{indices.sec}. For more information on specifying to solar irradiance, please contact Professors Ridley or Pawlowski. - -\subsection{Satellites} -\label{sat_aux.sec} - -GITM can provide output data at a list of times and locations using the SATELLITE input option, described in more detain in section~\ref{def_out.sec}. Although this is designed to output data along a satellite orbit, any list of locations may be used. There is currently no routine to create a satellite input file, but the format is simple and may be easily constructed from a satellite ASCII data file using awk. Here is a sample satellite input file: - -\begin{verbatim} -year mm dd hh mm ss msec long lat alt -#START -2002 4 16 23 34 25 0 299.16 -2.21 0.00 -2002 4 16 23 34 25 0 293.63 -1.21 0.00 -2002 4 16 23 34 25 0 291.28 -0.75 0.00 -2002 4 16 23 34 25 0 289.83 -0.45 0.00 -2002 4 16 23 34 25 0 288.79 -0.21 0.00 -2002 4 16 23 34 25 0 287.98 -0.01 0.00 -2002 4 16 23 34 25 0 287.32 0.16 0.00 -2002 4 16 23 34 25 0 286.76 0.31 0.00 -2002 4 16 23 34 25 0 286.26 0.46 0.00 -2002 4 16 23 34 25 0 285.81 0.60 0.00 -2002 4 16 23 34 25 0 285.39 0.74 0.00 -\end{verbatim} - -Note that the satellite output is not specified in this sample file. This is because altitude entry doesn't matter t this time, GITM ignores the altitude and outputs altitudinal profiles of the atmospheric characteristics at each geographic location and universal time. Although millisecond accuracy is provided, GITM should not be output at a resolution smaller than 1 second. The temporal resolution in the satellite file does not need to match the output resolution. - diff --git a/srcDoc/outline.tex b/srcDoc/outline.tex deleted file mode 100644 index 7fc7b4fa..00000000 --- a/srcDoc/outline.tex +++ /dev/null @@ -1,380 +0,0 @@ -% Copyright (C) 2002 Regents of the University of Michigan, portions used with permission -% For more information, see http://csem.engin.umich.edu/tools/swmf -{\tt main program} in {\bf main.f90} - -\begin{itemize} - - - -\item {\tt init\_mpi} in file {\bf init\_mpi.f90} - \begin{itemize} - \item {\tt MPI\_INIT} - \item {\tt MPI\_COMM\_RANK} - \item {\tt MPI\_COMM\_SIZE} - \end{itemize} - - -\item {\tt start\_timing} in file {\bf timing.f90} - - -\item {\tt delete\_stop} in file {\bf stop\_file.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \end{itemize} - - -\item {\tt init\_planet} in file {\bf ModEarth.f90} - \begin{itemize} - \item {\tt time\_int\_to\_real} in file time\_routines.f90 - \end{itemize} - - -\item {\tt set\_defaults} in file {\bf ModInputs.f90} - \begin{itemize} - \item {\tt set\_strings} in file ModInputs.f90 - \item {\tt time\_int\_to\_real} in file time\_routines.f90 - \item {\tt set\_planet\_defaults} in file Earth.f90 - \end{itemize} - - -\item {\tt read\_inputs} in file {\bf read\_inputs.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt stop\_gitm} in file library.f90 - \item {\tt stop\_gitm} in file library.f90 - \item {\tt stop\_gitm} in file library.f90 - \item {\tt MPI\_Bcast} - \item {\tt stop\_gitm} in file library.f90 - \item {\tt MPI\_Bcast} - \item {\tt stop\_gitm} in file library.f90 - \end{itemize} - - -\item {\tt set\_inputs} in file {\bf set\_inputs.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt time\_int\_to\_real} in file time\_routines.f90 - \item {\tt time\_real\_to\_int} in file time\_routines.f90 - \item {\tt fix\_vernal\_time} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt time\_int\_to\_real} in file time\_routines.f90 - \item {\tt read\_in\_time} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt time\_real\_to\_int} in file time\_routines.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt IO\_set\_f107\_single} - \item {\tt IO\_set\_f107a\_single} - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt IO\_set\_hpi\_single} - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt IO\_set\_kp\_single} - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt IO\_set\_imf\_by\_single} - \item {\tt IO\_set\_imf\_bz\_single} - \item {\tt IO\_set\_sw\_v\_single} - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt IO\_set\_inputs} - \item {\tt read\_MHDIMF\_Indices} - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_time} in file set\_inputs.f90 - \item {\tt read\_in\_time} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_int} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_satellites} in file satellites.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt Set\_Euv} in file calc\_euv.f90 - \item {\tt read\_in\_logical} in file set\_inputs.f90 - \item {\tt read\_in\_real} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt IO\_set\_inputs} - \item {\tt read\_NGDC\_Indices} - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt IO\_set\_inputs} - \item {\tt read\_SWPC\_Indices} - \item {\tt read\_in\_string} in file set\_inputs.f90 - \item {\tt IO\_set\_inputs} - \item {\tt read\_NOAAHPI\_Indices} - \item {\tt stop\_gitm} in file library.f90 - \item {\tt time\_int\_to\_real} in file time\_routines.f90 - \end{itemize} - - -\item {\tt initialize\_gitm} in file {\bf initialize.f90} - \begin{itemize} - \item {\tt init\_radcooling} in file ModEarth.f90 - \item {\tt start\_timing} in file timing.f90 - \item {\tt report} in file library.f90 - \item {\tt time\_real\_to\_int} in file time\_routines.f90 - \item {\tt fix\_vernal\_time} in file set\_inputs.f90 - \item {\tt get\_f107} - \item {\tt get\_f107a} - \item {\tt init\_grid} in file init\_grid.f90 - \item {\tt read\_inputs} in file read\_inputs.f90 - \item {\tt set\_inputs} in file set\_inputs.f90 - \item {\tt read\_restart} in file restart.f90 - \item {\tt init\_msis} in file init\_msis.Earth.f90 - \item {\tt set\_RrTempInd} in file ModRates.Earth.f90 - \item {\tt init\_euv} in file calc\_euv.f90 - \item {\tt init\_altitude} in file init\_altitude.f90 - \item {\tt UAM\_gradient} - \item {\tt init\_heating\_efficiency} in file Earth.f90 - \item {\tt init\_magheat} in file ModEarth.f90 - \item {\tt init\_isochem} in file Mars.f90 - \item {\tt init\_aerosol} in file ModEarth.f90 - \item {\tt init\_isochem} in file Mars.f90 - \item {\tt init\_msis} in file init\_msis.Earth.f90 - \item {\tt get\_temperature} in file init\_altitude.f90 - \item {\tt init\_iri} in file init\_iri.Earth.f90 - \item {\tt read\_waccm\_tides} in file tides.f90 - \item {\tt update\_waccm\_tides} in file tides.f90 - \item {\tt read\_tides} in file tides.f90 - \item {\tt update\_tides} in file tides.f90 - \item {\tt init\_b0} in file init\_b0.f90 - \item {\tt init\_energy\_deposition} in file init\_energy\_deposition.f90 - \item {\tt report} in file library.f90 - \item {\tt SUBSOLR} - \item {\tt exchange\_messages\_sphere} in file exchange\_messages\_sphere.f90 - \item {\tt calc\_pressure} in file calc\_pressure.f90 - \item {\tt UA\_calc\_electrodynamics} in file calc\_electrodynamics.f90 - \item {\tt calc\_eddy\_diffusion\_coefficient} in file Earth.f90 - \item {\tt calc\_rates} in file calc\_rates.Earth.f90 - \item {\tt calc\_viscosity} in file calc\_rates.Earth.f90 - \item {\tt calc\_rates} in file calc\_rates.Earth.f90 - \item {\tt end\_timing} in file timing.f90 - \item {\tt calc\_vtec} in file calc\_tec.f90 - \item {\tt calc\_single\_vtec} in file calc\_tec.f90 - \end{itemize} - - -\item {\tt write\_output} in file {\bf write\_output.f90} - \begin{itemize} - \item {\tt output} in file output\_common.f90 - \item {\tt move\_satellites} in file satellites.f90 - \item {\tt write\_restart} in file restart.f90 - \item {\tt logfile} in file logfile.f90 - \end{itemize} - - -\item {\tt report} in file {\bf library.f90} - - -\item Loop Start - \begin{itemize} - - - \item {\tt calc\_pressure} in file {\bf calc\_pressure.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \end{itemize} - - - \item {\tt calc\_timestep\_vertical} in file {\bf calc\_timestep.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt MPI\_AllREDUCE} - \item {\tt stop\_gitm} in file library.f90 - \end{itemize} - - - \item {\tt calc\_timestep\_horizontal} in file {\bf calc\_timestep.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt MPI\_AllREDUCE} - \end{itemize} - - - \item {\tt advance} in file {\bf advance.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt start\_timing} in file timing.f90 - \item {\tt update\_tides} in file tides.f90 - \item {\tt update\_waccm\_tides} in file tides.f90 - \item {\tt advance\_vertical\_all} in file advance.f90 - \item {\tt add\_sources} in file add\_sources.f90 - \item {\tt advance\_horizontal\_all} in file advance.f90 - \item {\tt time\_real\_to\_int} in file time\_routines.f90 - \item {\tt get\_f107} - \item {\tt stop\_gitm} in file library.f90 - \item {\tt get\_f107a} - \item {\tt stop\_gitm} in file library.f90 - \item {\tt init\_msis} in file init\_msis.Earth.f90 - \item {\tt init\_iri} in file init\_iri.Earth.f90 - \item {\tt init\_b0} in file init\_b0.f90 - \item {\tt end\_timing} in file timing.f90 - \item {\tt report} in file library.f90 - \item {\tt start\_timing} in file timing.f90 - \item {\tt calc\_rates} in file calc\_rates.Earth.f90 - \item {\tt calc\_viscosity} in file calc\_rates.Earth.f90 - \item {\tt advance\_vertical} in file advance\_vertical.f90 - \item {\tt end\_timing} in file timing.f90 - \item {\tt report} in file library.f90 - \item {\tt start\_timing} in file timing.f90 - \item {\tt exchange\_messages\_sphere} in file exchange\_messages\_sphere.f90 - \item {\tt calc\_rates} in file calc\_rates.Earth.f90 - \item {\tt calc\_physics} in file calc\_physics.f90 - \item {\tt advance\_horizontal} in file advance\_horizontal.f90 - \item {\tt calc\_physics} in file calc\_physics.f90 - \item {\tt calc\_rates} in file calc\_rates.Earth.f90 - \item {\tt advance\_horizontal} in file advance\_horizontal.f90 - \item {\tt exchange\_messages\_sphere} in file exchange\_messages\_sphere.f90 - \item {\tt end\_timing} in file timing.f90 - \end{itemize} - - - \item {\tt check\_stop} in file {\bf stop\_file.f90} - \begin{itemize} - \item {\tt report} in file library.f90 - \item {\tt start\_timing} in file timing.f90 - \item {\tt MPI\_AllREDUCE} - \item {\tt check\_start} in file stop\_file.f90 - \item {\tt end\_timing} in file timing.f90 - \end{itemize} - - - \item {\tt write\_output} in file {\bf write\_output.f90} - \begin{itemize} - \item {\tt output} in file output\_common.f90 - \item {\tt move\_satellites} in file satellites.f90 - \item {\tt write\_restart} in file restart.f90 - \item {\tt logfile} in file logfile.f90 - \end{itemize} - - - \end{itemize} %loop - - - \item Loop End - - -\item {\tt finalize\_gitm} in file {\bf finalize.f90} - \begin{itemize} - \item {\tt UA\_calc\_electrodynamics} in file calc\_electrodynamics.f90 - \item {\tt output} in file output\_common.f90 - \item {\tt write\_restart} in file restart.f90 - \item {\tt end\_timing} in file timing.f90 - \item {\tt report\_timing} in file timing.f90 - \item {\tt UAM\_XFER\_destroy} in file ModSphereInterface.f90 - \item {\tt UAM\_write\_error} in file ModSphereInterface.f90 - \item {\tt stop\_gitm} in file library.f90 - \item {\tt MPI\_FINALIZE} - \end{itemize} - - -\item {\tt stop\_gitm} in file {\bf library.f90} - \begin{itemize} - \item {\tt CON\_stop} in file main.f90 - \item {\tt MPI\_abort} - \end{itemize} -\end{itemize} diff --git a/srcDoc/outputs.md b/srcDoc/outputs.md new file mode 100644 index 00000000..2a8deb44 --- /dev/null +++ b/srcDoc/outputs.md @@ -0,0 +1,549 @@ +# Outputs {#outputs.sec} + +Now that you have managed to successfully complete a GITM run you've +found yourself with a bunch of output files. All of the GITM output is +in mks units and this data is contained within several files located in +the `UA/data` directory + +After [postprocessing](postprocessing.md), you will find yourself with a +`log*.dat` file,and many `.bin` files in whichever formats you specified in +SAVEPLOT (see [`#SAVEPLOT`](set_inputs.md#saveplot) + +The log file provides useful information about the run, such as whether a +restart was performed, which physical processes were used, and a list of some +variables which represent the state of the modeled system and its drivers. This +file can be very useful when sharing runs with other users, when revisiting an +old run, or merely ensuring that GITM performed as expected. Some example log +files can be found in the `srcTest/auto_test/ref_solns/` directory. + +## Possible Output Variables + +The output binary files can contain the following atmospheric +quantities: + +- **Altitude:** Altitude from the surface of the planet (m) + +- **Ar:** Argon density (m$`^{-3}`$) + +- **Ar Mixing Ratio:** Argon mixing ratio + +- **CH4 Mixing Ratio:** Methane mixing ratio + +- **Conduction:** Heat conduction + +- **EuvHeating:** EUV Heating rate + +- **H:** Hydrogen density (m$`^{-3}`$) + +- **H!U+!N:** H$`^+`$ density (m$`^{-3}`$) + +- **H2 Mixing Ratio:** Molecular Hydrogen mixing ratio + +- **HCN Mixing Ratio:** Hydrogen Cyanide mixing ratio + +- **He:** Helium density (m$`^{-3}`$) + +- **He!U+!N:** He$`^+`$ density (m$`^{-3}`$) + +- **Heaing Efficiency:** Heating efficiency + +- **Heat Balance Total:** Heat balance total + +- **Latitude:** Geographic latitude (degrees) + +- **Longitude:** Geographic longitude (degrees) + +- **N!D2!N:** N$`_2`$ density (m$`^{-3}`$) + +- **N!D2!U+!N:** N$`_2^+`$ density (m$`^{-3}`$) + +- **N!U+!N:** N$`^+`$ density (m$`^{-3}`$) + +- **N(!U2!ND):** N($`^2`$D) density (m$`^{-3}`$) + +- **N(!U2!NP):** N($`^2`$P) density (m$`^{-3}`$) + +- **N(!U4!NS):** N($`^4`$S) density (m$`^{-3}`$) + +- **N2 Mixing Ratio:** Molecular nitrogen mixing ratio + +- **NO:** Nitrious Oxide density (m$`^{-3}`$) + +- **NO!U+!N:** NO$`^+`$ density (m$`^{-3}`$) + +- **O!D2!N:** O$`_2`$ density (m$`^{-3}`$) + +- **O!D2!U+!N:** O$`_2^+`$ density (m$`^{-3}`$) + +- **O(!U1!ND):** O($`^1`$D) density (m$`^{-3}`$) + +- **O(!U2!ND)!U+!N:** O($`^2`$D) density (m$`^{-3}`$) + +- **O(!U2!NP)!U+!N:** O($`^2`$P) density (m$`^{-3}`$) + +- **O(!U3!NP):** O($`^3`$P) density (m$`^{-3}`$) + +- **O_4SP\_!U+!N:** O($`_4`$SP)$`^+`$ density (m$`^{-3}`$) + +- **RadCooling:** Radiative Cooling rate + +- **Rho:** Neutral density (m$`^{-3}`$) + +- **Temperature:** Neutral temperature (K) + +- **V!Di!N (east):** Ion velocity towards geographic East (m s$`^{-1}`$) + +- **V!Di!N (north):** Ion velocity towards geographic North (m + s$`^{-1}`$) + +- **V!Di!N (up):** Vertical ion velocity (m s$`^{-1}`$) + +- **V!Dn!N (east):** Neutral velocity towards geographic East (m + s$`^{-1}`$) + +- **V!Dn!N (north):** Neutral velocity towards geographic North (m + s$`^{-1}`$) + +- **V!Dn!N (up):** Vertical neutral velocity (m s$`^{-1}`$) + +- **V!Dn!N (up,N!D2!N):** Vertical N$`_2`$ velocity (m s$`^{-1}`$) + +- **V!Dn!N (up,N(!U4!NS)):** Vertical N($`^4`$S) velocity (m s$`^{-1}`$) + +- **V!Dn!N (up,NO):** Vertical NO velocity (m s$`^{-1}`$) + +- **V!Dn!N (up,O!D2!N):** Vertical O$`_2`$ velocity (m s$`^{-1}`$) + +- **V!Dn!N (up,O(!U3!NP)):** Vertical O($`^3`$P) velocity (m s$`^{-1}`$) + +- **e-:** electron density (m$`^{-3}`$) + +- **eTemperature:** electron temperature (K) + +- **iTemperature:** ion temperature (K) + +- **time:** Universal time + + +Currently the following output files are available: + +## 2DANC + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Local Time + 5 Solar Zenith Angle + 6 Vertical TEC + 7 AltIntJouleHeating (W/m2) + 8 AltIntHeatingTransfer (W/m2) + 9 AltIntEuvHeating (W/m2) + 10 AltIntPhotoElectronHeating (W/m2) + 11 AltIntChamicalHeating (W/m2) + 12 AltIntRadCooling (W/m2) + 12 AltIntCO2Cooling (W/m2) + 12 AltIntNOCooling (W/m2) + 12 AltIntOCooling (W/m2) + +## 2DGEL + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Potential + 5 Pedersen Conductance + 6 Hall Conductance + 7 Electron_Average_Energy + 8 Electron_Energy_Flux + 9 DivJuAlt + 10 Pedersen FL Conductance + 11 Hall FL Conductance + 12 DivJu FL + 13 FL Length + +## 2DHME + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Local Time + 5 Vertical TEC + +## 2DMEL + + 1 Longitude + 2 Latitude + 3 Altitude + 4 MLT + 5 GeoLat + 6 GeoLon + 7 Pedersen Conductance + 8 Hall Conductance + 9 DivJuAlt + 10 Field Line Length + 11 Sigma PP + 12 Sigma LL + 13 Sigma H + 14 Sigma C + 15 Sigma PL + 16 Sigma LP + 17 K^D_{m\phi} + 18 K^D_{m\lamda} + 19 Solver A + 20 Solver B + 21 Solver C + 22 Solver D + 23 Solver E + 24 Solver S + 25 DynamoPotential + 26 Ed1new + 27 Ed2new + 28 Kphi + 29 Klamda + +## 2DTEC + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Solar Zenith Angle + 5 Vertical TEC + + +## 2DUSR + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Potential (kV) + 5 Average Energy (keV) + 6 Total Energy (ergs) + 7 Discrete Average Energy (keV) + 8 Discrete Total Energy (ergs) + 9 Wave Average Energy (keV) + 10 Wave Total Energy (ergs) + 11 Flux@5.000E+05eV (/cm2/s) + 12 Flux@4.009E+05eV (/cm2/s) + 13 Flux@3.215E+05eV (/cm2/s) + 14 Flux@2.578E+05eV (/cm2/s) + 15 Flux@2.067E+05eV (/cm2/s) + 16 Flux@1.658E+05eV (/cm2/s) + 17 Flux@1.329E+05eV (/cm2/s) + 18 Flux@1.066E+05eV (/cm2/s) + 19 Flux@8.547E+04eV (/cm2/s) + 20 Flux@6.853E+04eV (/cm2/s) + 21 Flux@5.495E+04eV (/cm2/s) + 22 Flux@4.407E+04eV (/cm2/s) + 23 Flux@3.533E+04eV (/cm2/s) + 24 Flux@2.833E+04eV (/cm2/s) + 25 Flux@2.272E+04eV (/cm2/s) + 26 Flux@1.822E+04eV (/cm2/s) + 27 Flux@1.461E+04eV (/cm2/s) + 28 Flux@1.171E+04eV (/cm2/s) + 29 Flux@9.393E+03eV (/cm2/s) + 30 Flux@7.532E+03eV (/cm2/s) + 31 Flux@6.040E+03eV (/cm2/s) + 32 Flux@4.843E+03eV (/cm2/s) + 33 Flux@3.884E+03eV (/cm2/s) + 34 Flux@3.114E+03eV (/cm2/s) + 35 Flux@2.497E+03eV (/cm2/s) + 36 Flux@2.002E+03eV (/cm2/s) + 37 Flux@1.606E+03eV (/cm2/s) + 38 Flux@1.287E+03eV (/cm2/s) + 39 Flux@1.032E+03eV (/cm2/s) + 40 Flux@8.278E+02eV (/cm2/s) + 41 Flux@6.638E+02eV (/cm2/s) + 42 Flux@5.323E+02eV (/cm2/s) + 43 Flux@4.268E+02eV (/cm2/s) + 44 Flux@3.423E+02eV (/cm2/s) + 45 Flux@2.744E+02eV (/cm2/s) + 46 Flux@2.201E+02eV (/cm2/s) + 47 Flux@1.765E+02eV (/cm2/s) + 48 Flux@1.415E+02eV (/cm2/s) + 49 Flux@1.135E+02eV (/cm2/s) + 50 Flux@9.099E+01eV (/cm2/s) + 51 Flux@7.296E+01eV (/cm2/s) + 52 Flux@5.850E+01eV (/cm2/s) + 53 Flux@4.691E+01eV (/cm2/s) + 54 Flux@3.762E+01eV (/cm2/s) + 55 Flux@3.016E+01eV (/cm2/s) + 56 Flux@2.419E+01eV (/cm2/s) + 57 Flux@1.940E+01eV (/cm2/s) + 58 Flux@1.555E+01eV (/cm2/s) + 59 Flux@1.247E+01eV (/cm2/s) + 60 Flux@1.000E+01eV (/cm2/s) + +## 3DALL + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Rho + 5 [O(!U3!NP) ] + 6 [O!D2!N ] + 7 [N!D2!N ] + 8 [N(!U4!NS) ] + 9 [NO ] + 10 [He ] + 11 [N(!U2!ND) ] + 12 [N(!U2!NP) ] + 13 [H ] + 14 [CO!D2!N ] + 15 [O(!U1!ND) ] + 16 Temperature + 17 V!Dn!N (east) + 18 V!Dn!N (north) + 19 V!Dn!N (up) + 20 V!Dn!N (up,O(!U3!NP) ) + 21 V!Dn!N (up,O!D2!N ) + 22 V!Dn!N (up,N!D2!N ) + 23 V!Dn!N (up,N(!U4!NS) ) + 24 V!Dn!N (up,NO ) + 25 V!Dn!N (up,He ) + 26 [O_4SP_!U+!N ] + 27 [NO!U+!N ] + 28 [O!D2!U+!N ] + 29 [N!D2!U+!N ] + 30 [N!U+!N ] + 31 [O(!U2!ND)!U+!N ] + 32 [O(!U2!NP)!U+!N ] + 33 [H!U+!N ] + 34 [He!U+!N ] + 35 [e- ] + 36 eTemperature + 37 iTemperature + 38 V!Di!N (east) + 39 V!Di!N (north) + 40 V!Di!N (up) + +## 3DCHM + + 1 Longitude + 2 Latitude + 3 Altitude + 4 N!D2!U+!N + e + 5 O!D2!U+!N + e + 6 N!D2!U+!N + O + 7 NO!U+!N + e + 8 N!U+!N + O!D2!N + 9 NO + N + 10 O!U+!N + O!D2!N + 11 N + O!D2!N + 12 O!D2!U+!N + N + 13 O!D2!U+!N + NO + 14 O!D2!U+!N + N2 + 15 N!D2!U+!N + O!D2!N + 16 N!U+!N + O + 17 O!+!N + N!D2!N + 18 O(1D) + N!D2!N + 19 O(1D) + O!D2!N + 20 O(1D) + O + 21 O(1D) + e + 22 N(2D) + O!D2!N + 23 O!U+!N(2D)+e + 24 N(2D) + O + 25 N(2D) + e + 26 O!U+!N(2D + N!D2!N + 27 O!U+!N(2P) + e + 28 O!U+!N(2P) + O + 29 O!U+!N(2P) + N!D2!N + 30 Chemical Heating Rate + +## 3DGLO + + 1 Longitude + 2 Latitude + 3 Altitude + 4 6300 A Emission + 5 PhotoElectronUp + 6 PhotoElectronDown + +## 3DHME + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Rho + 5 [O(!U3!NP) ] + 6 [O!D2!N ] + 7 [N!D2!N ] + 8 [N(!U4!NS) ] + 9 [NO ] + 10 [He ] + 11 [N(!U2!ND) ] + 12 [N(!U2!NP) ] + 13 [H ] + 14 [CO!D2!N ] + 15 [O(!U1!ND) ] + 16 Temperature + 17 V!Dn!N (east) + 18 V!Dn!N (north) + 19 V!Dn!N (up) + 20 V!Dn!N (up,O(!U3!NP) ) + 21 V!Dn!N (up,O!D2!N ) + 22 V!Dn!N (up,N!D2!N ) + 23 V!Dn!N (up,N(!U4!NS) ) + 24 V!Dn!N (up,NO ) + 25 V!Dn!N (up,He ) + 26 [O_4SP_!U+!N ] + 27 [NO!U+!N ] + 28 [O!D2!U+!N ] + 29 [N!D2!U+!N ] + 30 [N!U+!N ] + 31 [O(!U2!ND)!U+!N ] + 32 [O(!U2!NP)!U+!N ] + 33 [H!U+!N ] + 34 [He!U+!N ] + 35 [e- ] + 36 eTemperature + 37 iTemperature + 38 V!Di!N (east) + 39 V!Di!N (north) + 40 V!Di!N (up) + 41 PhotoElectron Heating + 42 Joule Heating + 43 Auroral Heating + 44 Specific Heat + 45 Magnetic Latitude + 46 Magnetic Longitude + 47 B.F. East + 48 B.F. North + 49 B.F. Vertical + 50 B.F. Magnitude + 51 Potential + 52 PotentialY + 53 E.F. East + 54 E.F. North + 55 E.F. Vertical + +## 3DION + + 1 Longitude + 2 Latitude + 3 Altitude + 4 [O_4SP_!U+!N ] + 5 [NO!U+!N ] + 6 [O!D2!U+!N ] + 7 [N!D2!U+!N ] + 8 [N!U+!N ] + 9 [O(!U2!ND)!U+!N ] + 10 [O(!U2!NP)!U+!N ] + 11 [H!U+!N ] + 12 [He!U+!N ] + 13 [e- ] + 14 eTemperature + 15 iTemperature + 16 V!Di!N (east) + 17 V!Di!N (north) + 18 V!Di!N (up) + 19 Ed1 + 20 Ed2 + 21 Je1 + 22 Je2 + 23 Magnetic Latitude + 24 Magnetic Longitude + 25 B.F. East + 26 B.F. North + 27 B.F. Vertical + 28 B.F. Magnitude + 29 Potential + 30 E.F. East + 31 E.F. North + 32 E.F. Vertical + 33 E.F. Magnitude + 34 IN Collision Freq + 35 PressGrad (east) + 36 PressGrad (north) + 37 PressGrad (up) + +## 3DLST + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Rho (kg/m3) + 5 [O(!U3!NP) ] (/m3) + 6 [O!D2!N ] (/m3) + 7 [N!D2!N ] (/m3) + 8 [NO ] (/m3) + 9 Vn (east) (m/s) + 10 Vn (north) (m/s) + 11 Vn (up) (m/s) + 12 [O_4SP_!U+!N ] (/m3) + 13 [NO!U+!N ] (/m3) + 14 [O!D2!U+!N ] (/m3) + 15 [N!D2!U+!N ] (/m3) + 16 [e- ] (/m3) + 17 Vi (east) (m/s) + 18 Vi (north) (m/s) + 19 Vi (up) (m/s) + 20 Neutral Temperature (K) + +## 3DMAG + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Magnetic Latitude + 5 Magnetic Longitude + 6 B.F. East + 7 B.F. North + 8 B.F. Vertical + 9 B.F. Magnitude + +## 3DNEU + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Rho + 5 [O(!U3!NP) ] + 6 [O!D2!N ] + 7 [N!D2!N ] + 8 [N(!U4!NS) ] + 9 [NO ] + 10 [He ] + 11 [N(!U2!ND) ] + 12 [N(!U2!NP) ] + 13 [H ] + 14 [CO!D2!N ] + 15 [O(!U1!ND) ] + 16 Temperature + 17 V!Dn!N (east) + 18 V!Dn!N (north) + 19 V!Dn!N (up) + 20 V!Dn!N (up,O(!U3!NP) ) + 21 V!Dn!N (up,O!D2!N ) + 22 V!Dn!N (up,N!D2!N ) + 23 V!Dn!N (up,N(!U4!NS) ) + 24 V!Dn!N (up,NO ) + 25 V!Dn!N (up,He ) + +## 3DTHM + + 1 Longitude + 2 Latitude + 3 Altitude + 4 EUV Heating + 5 Conduction + 6 Molecular Conduction + 7 Eddy Conduction + 8 Eddy Adiabatic Conduction + 9 Chemical Heating + 10 Auroral Heating + 11 Joule Heating + 12 NO Cooling + 13 O Cooling + 14 Total Abs EUV + 15 Cp + 16 Rho + 17 E-Field Mag + 18 Sigma Ped + +## 3DUSR + + 1 Longitude + 2 Latitude + 3 Altitude + 4 Joule Heating + 5 JPara \ No newline at end of file diff --git a/srcDoc/outputs.tex b/srcDoc/outputs.tex deleted file mode 100644 index 91c64494..00000000 --- a/srcDoc/outputs.tex +++ /dev/null @@ -1,619 +0,0 @@ -Now that you have managed to successfully complete a GITM run you've found yourself with a bunch of output files. All of the GITM output is in mks units and this data is contained within several files located in the {\tt UA/data} directory, as was previously discussed in Chapter~\ref{quickstart.ch} Section~\ref{post_process.sec}. You will have found yourself with several {\tt iriOut\_*.dat} files, a {\tt log*.dat} file, and many {\tt .bin} files in whichever formats you specified in SAVEPLOT (see Chapter~\ref{input.ch} Section~\ref{def_out.sec}). The {\tt iriOut\_*.dat} files are required by the IRI model and not typically used when analyzing the outcome of the GITM run. - -The log file provides useful information about the run, such as whether a restart was performed, which physical processes were used, and a list of the universal time, time-step, neutral temperature ranges (T), solar and geomagnetic indices, and the neutral velocity (VV) ranges for each iteration. This file can be very useful when sharing runs with other users, when revisiting an old run, or merely ensuring that GITM performed as expected. An example log file is provided below: - -\begin{verbatim} -## Inputs from UAM.in -# Resart= F -# Eddy coef: 100.000 Eddy P0: 0.020 Eddy P1: 0.003 Eddy Scaling: 1.000 -# Statistical Models Only: F Apex: T -# EUV Data: TFile: -fismflux.dat -# AMIE: none -none -# Solar Heating: T Joule Heating: T Auroral Heating: T -# NO Cooling: T O Cooling: T -# Conduction: T Turbulent Conduction: T Updated Turbulent Conduction: T -# Pressure Grad: T Ion Drag: T Neutral Drag: T -# Viscosity: T Coriolis: T Gravity: T -# Ion Chemistry: T Ion Advection: T Neutral Chemistry: T - -#START - iStep yyyy mm dd hh mm ss ms dt min(T) max(T)... - ...mean(T) min(VV) max(VV) mean(VV) F107 F107A By Bz Vx... - ...HP HPn HPs SubsolarLon SubsolarLat SubsolarVTEC - 2 2011 9 23 0 0 2 297 2.2979 168.75192 1062.87354... - ...933.09984 -48.19362 524.93645 1.01910 159.3 127.9 -4.6 0.5 406.9... - ...11.1 14.4 15.5 3.14145 -0.37655 45.73188 - . - . - . -\end{verbatim} - -The 3DALL output binary files can contain the following atmospheric quantities: - -\begin{itemize} -\item[]{\bf Altitude:} Altitude from the surface of the planet (m) -\item[]{\bf Ar:} Argon density (m$^{-3}$) -\item[]{\bf Ar Mixing Ratio:} Argon mixing ratio -\item[]{\bf CH4 Mixing Ratio:} Methane mixing ratio -\item[]{\bf Conduction:} Heat conduction -\item[]{\bf EuvHeating:} EUV Heating rate -\item[]{\bf H:} Hydrogen density (m$^{-3}$) -\item[]{\bf H!U+!N:} H$^+$ density (m$^{-3}$) -\item[]{\bf H2 Mixing Ratio:} Molecular Hydrogen mixing ratio -\item[]{\bf HCN Mixing Ratio:} Hydrogen Cyanide mixing ratio -\item[]{\bf He:} Helium density (m$^{-3}$) -\item[]{\bf He!U+!N:} He$^+$ density (m$^{-3}$) -\item[]{\bf Heaing Efficiency:} Heating efficiency -\item[]{\bf Heat Balance Total:} Heat balance total -\item[]{\bf Latitude:} Geographic latitude (degrees) -\item[]{\bf Longitude:} Geographic longitude (degrees) -\item[]{\bf N!D2!N:} N$_2$ density (m$^{-3}$) -\item[]{\bf N!D2!U+!N:} N$_2^+$ density (m$^{-3}$) -\item[]{\bf N!U+!N:} N$^+$ density (m$^{-3}$) -\item[]{\bf N(!U2!ND):} N($^2$D) density (m$^{-3}$) -\item[]{\bf N(!U2!NP):} N($^2$P) density (m$^{-3}$) -\item[]{\bf N(!U4!NS):} N($^4$S) density (m$^{-3}$) -\item[]{\bf N2 Mixing Ratio:} Molecular nitrogen mixing ratio -\item[]{\bf NO:} Nitrious Oxide density (m$^{-3}$) -\item[]{\bf NO!U+!N:} NO$^+$ density (m$^{-3}$) -\item[]{\bf O!D2!N:} O$_2$ density (m$^{-3}$) -\item[]{\bf O!D2!U+!N:} O$_2^+$ density (m$^{-3}$) -\item[]{\bf O(!U1!ND):} O($^1$D) density (m$^{-3}$) -\item[]{\bf O(!U2!ND)!U+!N:} O($^2$D) density (m$^{-3}$) -\item[]{\bf O(!U2!NP)!U+!N:} O($^2$P) density (m$^{-3}$) -\item[]{\bf O(!U3!NP):} O($^3$P) density (m$^{-3}$) -\item[]{\bf O\_4SP\_!U+!N:} O($_4$SP)$^+$ density (m$^{-3}$) -\item[]{\bf RadCooling:} Radiative Cooling rate -\item[]{\bf Rho:} Neutral density (m$^{-3}$) -\item[]{\bf Temperature:} Neutral temperature (K) -\item[]{\bf V!Di!N (east):} Ion velocity towards geographic East (m s$^{-1}$) -\item[]{\bf V!Di!N (north):} Ion velocity towards geographic North (m s$^{-1}$) -\item[]{\bf V!Di!N (up):} Vertical ion velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (east):} Neutral velocity towards geographic East (m s$^{-1}$) -\item[]{\bf V!Dn!N (north):} Neutral velocity towards geographic North (m s$^{-1}$) -\item[]{\bf V!Dn!N (up):} Vertical neutral velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (up,N!D2!N):} Vertical N$_2$ velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (up,N(!U4!NS)):} Vertical N($^4$S) velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (up,NO):} Vertical NO velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (up,O!D2!N):} Vertical O$_2$ velocity (m s$^{-1}$) -\item[]{\bf V!Dn!N (up,O(!U3!NP)):} Vertical O($^3$P) velocity (m s$^{-1}$) -\item[]{\bf e-:} electron density (m$^{-3}$) -\item[]{\bf eTemperature:} electron temperature (K) -\item[]{\bf iTemperature:} ion temperature (K) -\item[]{\bf time:} Universal time -\end{itemize} - -There are many routines available to process and analyze the GITM binary files. The majority of these routines are written in IDL and are available in the {\tt srcIDL} directory within the GITM model directory. Currently 50 routines have been saved in this directory and more are under development. Alternatively, python routines are currently being developed and these are located in the {\tt srcPython} directory. Please not that when using the IDL reader the universal time is read in as epoch seconds from January 1, 1965 00:00 UT, while when using the python reader, the time is imported as a datetime object. - -\section{IDL} -\label{idl.sec} - -Here is an complete list with some description of the IDL processing and visualization routines currently available. Please feel free to update this section for other GITM users when you CVS your vetted GITM processing routines. - -\subsubsection{gitm\_read\_bin} - -This is a routine to read a GITM bin file into IDL. This is great when you want to get a handle on the data and experiment with different visualization methods. - -\subsubsection{thermo\_plotsat} - -This is the most commonly used routine to plot the 1D GITM results. It can also be used to plot satellite files and other 1D simulations. It is relatively straight forward to use, but experimentation can be help. This is an actual program, so you have to {\tt .run} it. - -\subsubsection{thermo\_gui} - -This is a someone simplistic graphical user interface code for plotting 3D results. The filename has to be entered manually in the upper left. You then have to press the button for loading the file. Variables appear on the left side, and you can select which one you want to plot. You then select which of the available planes you would like to look at (lat/lon, lat/alt, or lon/alt) or scroll through the options. This interface allows you to add wind vectors, plot in polar coordinates, and plot the log of the variable. - -\subsubsection{thermo\_batch\_new} - -This code will let you look at at 3D files exactly the same way as thermo\_gui, but is all scripted. There are a few features that this has that thermo\_batch doesn't have: - -\begin{enumerate} -%\setlength{\itemsep}{-3in} - \item You can use wildcards for the file name, so that a list of files can be read. The postscript file names created for each figure will be differentiated by appending numbers sequentially so that no figures are overwritten. - \item When plotting a lat/alt plane, you can do a zonal average. - \item You can do a global average. -\end{enumerate} - -\subsubsection{thermo\_plotter} - -All of the above plotting codes will only plot one plot per page. This code will plot many more than one plot per page. You can plot multiple variables on the same page, or multiple files with the same variable, or both. - -\subsubsection{Other IDL Routines} - -Please feel free to provide a description of these routines so that GITM users do not waste their time rewriting code that already exists. - -\begin{multicols}{3} -\begin{itemize} -\item{\bf ask} -\item{\bf c\_a\_to\_r} -\item{\bf c\_a\_to\_s} -\item{\bf chopr} -\item{\bf closedevice} -\item{\bf c\_r\_to\_a} -\item{\bf c\_s\_to\_a} -\item{\bf get\_position} -\item{\bf makect} -\item{\bf mklower} -\item{\bf mm} -\item{\bf plotct} -\item{\bf plotdumb} -\item{\bf plotmlt} -\item{\bf pos\_space} -\item{\bf read\_thermosphere\_file} -\item{\bf setdevice} -\item{\bf thermo\_batch} -\item{\bf thermo\_calcforce} -\item{\bf thermo\_champ} -\item{\bf thermo\_compare} -\item{\bf thermo\_compare\_time} -\item{\bf thermo\_convert\_champfiles} -\item{\bf thermo\_guvi} -\item{\bf thermo\_magequator} -\item{\bf thermo\_make\_summary} -\item{\bf thermo\_mkguvisat} -\item{\bf thermo\_mksatsave} -\item{\bf thermo\_mksave} -\item{\bf thermo\_mktec} -\item{\bf thermo\_on2} -\item{\bf thermo\_plotdist} -\item{\bf thermo\_plotlog} -\item{\bf thermo\_plot\_new} -\item{\bf thermo\_plot} -\item{\bf thermo\_plotsat2} -\item{\bf thermo\_plotsat\_constalt\_ON2} -\item{\bf thermo\_plotsat\_constalt} -\item{\bf thermo\_plotvectors} -\item{\bf thermo\_readsat} -\item{\bf thermo\_sigma} -\item{\bf thermo\_superposed} -\item{\bf thermo\_tec} -\item{\bf thermo\_temp} -\item{\bf tostr} -\end{itemize} -\end{multicols} - -\section{Python} -\label{python.sec} - -This section provides an almost complete list of the vetted GITM python routines. These routines require that you use PyBats, a module included in SpacePy. This is a library developed for space physics applications by the scientists at Los Alamos and can be downloaded for free at: -{\tt http://spacepy.lanl.gov} - -Another library, Basemap, is required for certain plotting routines. Basemap is a part of the Matplotlib Toolkit and can be installed using Fink, Macports, or downloaded at: -{\tt http://matplotlib.org/basemap/} - -Yet another library, Pysolar, is used to calculate the solar position. You don't \textit{need} to download Pysolar to run any of the GITM plotting scripts, but it does expand the functionality. Pysolar is documented at Github and can be downloaded at: -{\tt http://www.pysolar.org} - -Python scripts that create movies rely on external programs to do so. The scripts included here use FFmpeg, which can be installed using Fink, Macports, or downloaded at: {\tt http://http://www.ffmpeg.org/} - -If you have questions about these routines or are at the University of Michigan and want to start using Python, Dr. Welling is the man to see. The source code behind the PyBats GITM routines are also located in {\tt GITM2/srcPython}. - -The following programs include the vetted python routines. The examples shown are meant to be run in ipython, an interactive command-line interface for python. The terminal window that is running ipython should be located in the {\tt GITM2/srcPython} directory. The test file for the example code is one of the files output after running the default {\tt UAM.in} file. - -\subsubsection{gitm.py} - -GITM is a PyBats submodule that handles input and output from GITM. It can be helpful for those wishing to write their own GITM processing routines but doesn't contain any analysis or visualization routines. - -Once you have downloaded and installed Spacepy, the gitm submodule can be accessed via: - -\noindent{\tt import spacepy.pybats.gitm} - - \noindent Though to be sure that you have the latest version it is best to CVS the latest version of {\tt gitm.py} and load: - -\noindent {\tt import gitm} - -\noindent while running the {\tt GITM2/srcPhython} directory. This module contains the following routines: - -\begin{itemize} -\item[]{\bf GitmBin: } A data class and routine to load a GITM output bin file, based on the PyBats data container class PbData. There are two keywords arguements that may be associated with this input, \textit{ionfile}, and \textit{varlist}. The first keyword, \textit{ionfile}, takes a 3DION file as input, assigns an attribute called `ionfile' to the data class, and runs one of the functions called {\bf calc\_magvel} to calculate the ion and neutral velocities in magnetic coordinates. The second keyword, \textit{varlist}, takes a list of atmospheric quantities such as those listed at the beginning of this chapter. More variables may always be added from the same file that created a data class by calling the function {\bf append\_data}. Geographic position in degrees and local time are also added to the output, regardless of what variables are specified. A 3DION file may also be associated with the output GITM class after the fact by assigning a filename to the attribute `ionfile' and the magnetic velocity quantities obtained by running {\bf calc\_magvel}. - \begin{itemize} - \item[]{\bf append\_data: } A routine to append variables specified in an input list. These are obtained from the file specified in the `file' attribute. - \item[]{\bf append\_units: } A routine to append unit, scale, and name attributes to the variable keys in the data class. Runs automatically with {\bf GitmBin}. - \item[]{\bf calc\_deg: } A routine to compute latitude and longitude in degrees instead of radians. Runs automatically with {\bf GitmBin}. - \item[]{\bf calc\_lt: } A routine to compute local time from universal time and longitude. Runs automatically with {\bf GitmBin}. - \item[]{\bf calc\_magdi: } A routine to compute the magnetic inclination and declination from the magnetic field expressed in East-North-Vertical coordinates. Runs automatically with {\bf GitmBin} when the appropriate inputs are present. - \item[]{\bf calc\_magvel: } A routine to compute ion and neutral velocities in magnetic coordinates. Runs automatically with {\bf GitmBin} if the \textit{ionfile} keyword is specified. - \item[]{\bf calc\_tec: } A routine to calculate the VTEC from any GITM data structure that has altitude and electron density. - \item[]{\bf calc\_2dion: } A routine to calculate the VTEC (if it hasn't been done already), $h_mF_2$, and $N_mF_2$ from any GITM data structure that has altitude and electron density - \end{itemize} -\end{itemize} - -You can load a GITM binary file by entering the following commands. Comments are preceded by a `\#'. - -\begin{verbatim} -In [1]: import spacepy -In [2]: import gitm # Load the local version of gitm.py, which may be more up-to-date -In [3]: gdata = gitm.GitmBin(`3DALL_t021124_000000.bin') # example binary file -In [4]: gdata.attrs -Out[4]: -{`endian': `big', - `file': `3DALL_t021124_000000.bin', - `nAlt': 54, - `nLat': 22, - `nLon': 22, - `nVars': 39, - `version': 3.13} -\end{verbatim} - -The method used by {\bf calc\_2dion} to compute the $h_mF_2$ (height of the F$_2$ region density peak) does more than just look for the height of the electron maximum at the specified locations. Instead it performs a few checks to ensure that the peak density lies within an altitude range consistent with the F region and is not an edge artifact. This process is outlined in Figure~\ref{hmf2_flowchart.fig}. - -\begin{figure} -\begin{center} -\noindent\includegraphics[width=\textwidth]{Figures/determining_hmF2_flowchart.png} -\caption{Process for finding the $h_mF_2$ from a GITM electron density altitude profile.} -\label{gitm_3D_global_plots.fig} -\end{center} -\label{hmf2_flowchart.fig} -\end{figure} - -One of the intermediate steps in Figure~\ref{hmf2_flowchart.fig} is to find the inflection points in the altitude profile of electron density. Figure~\ref{hmf2_profile.fig} shows an example of an electron density profile with no local maxima. To determine the height of the F$_2$ peak, the height derivative of the electron density profile is computed and local minima along the profile located. These local minima correspond to inflection points in the electron density profile, and can be used to locate a reasonable $h_mF_2$. - -\begin{figure} -\begin{center} -\noindent\includegraphics[width=.6\textwidth]{Figures/determining_hmF2_saddle_profile.png} -\caption{Electron density profile (red) and height derivative of the electron density profile (blue) for an instance where GITM does not show a clear F$_2$ peak. The $h_mF_2$ is identified by choosing the inflection point (local minima from the height derivative of the electron density profile) with the largest electron density (dark grey line). The light grey lines show the remaining locations of inflection points.} -\label{gitm_3D_global_plots.fig} -\end{center} -\label{hmf2_profile.fig} -\end{figure} - -\subsubsection{gitm\_time.py} - -gitm\_time has not yet been incorporated into PyBats, as it is actively being developed. This module contains the following routines: - -\begin{itemize} -\item[]{\bf GitmTime: } A data class and routine to load multiple GITM output binaries into a structure that includes a universal time (UT) dimension. All data types and attributes provided by GitmBin are provided in this data class. - \begin{itemize} - \item[]{\bf appendgitm: } Add another GitmBin object to an existing GitmTime object. This routine is also be used to create a GitmTime object. - \item[]{\bf appendobs: } Add any type of data to an existing GitmTime object. The data can be directly appended or matched to the existing GitmTime data. Three match options are available: nearest neighbor, running average, and running median. The latter two options compute a central value and standard deviation using a specified location/time window about each GitmTime data point. - \item[]{\bf sat\_dateloc\_ticks: } Define axis ticks that include all the information necessary to know where measurements lie in spacetime. This is most useful when plotting data along a satellite orbit. - \end{itemize} -\item[]{\bf load\_multiple\_gitm\_bin: } A routine to load a list of GITM output binary files into GitmBin data structures. The output is a list of the GitmBin structures, where each element in the list contains the data from a GITM output binary. -\item[]{\bf set\_sat\_dateloc\_label: } Create a label for the ticks created by GitmTime.sat\_dateloc\_ticks. Outputs the label onto a plot on the right end of the x-axis. -\end{itemize} - -You can load multiple GITM binary files into a data structure with UT dependence by entering the following commands. Commands outside of ipython are preceded by a `\$'. Again, the output files used are produced by running the default {\tt UAM.in} file. - -\begin{verbatim} -$ ls 3DALL_t021124_000* > test.list -$ ipython -In [1]: import spacepy -In [2]: import gitm # Load the local version of gitm.py, which may be more up-to-date -In [3]: import gitm_time as gt -In [4]: gtdata = gt.GitmTime(`test.list') -In [5]: print gtdata['time'][:] -[datetime.datetime(2002, 11, 24, 0, 0) - datetime.datetime(2002, 11, 24, 0, 5)] -In [6]: print gtdata['dLon'][0,:,10,27] -[ -30. -10. 10. 30. 50. 70. 90. 110. 130. 150. 170. 190. - 210. 230. 250. 270. 290. 310. 330. 350. 370. 390.] -In [7]: print gtdata['dLat'][0,10,:,27] -[-105. -95. -85. -75. -65. -55. -45. -35. -25. -15. -5. 5. - 15. 25. 35. 45. 55. 65. 75. 85. 95. 105.] -In [8]: print gtdata['Altitude'][0,10,10,:] -[ 96660.90047544 98330.45023772 100000. 101669.54976228 - 103348.94180562 105050.15497984 106788.53042153 108584.61276626 - 110467.61429397 112482.48190265 114698.91401856 117219.51380361 - 120200.6752566 123855.40706002 128245.43857411 133349.83464183 - 139220.53740507 145894.02746965 153389.42319611 161708.33330952 - 170836.59866663 180746.14929878 191399.58798926 202753.75931196 - 214763.18484817 227382.89781152 240569.83529396 254283.5502381 - 268486.11667059 283141.61144778 298215.46358093 313673.89525175 - 329480.19139848 345605.83193525 362018.21624294 378685.73558327 - 395578.19775965 412667.22510966 429926.74623085 447332.78448625 - 464864.02590453 482501.63589793 500229.1662886 518032.39821451 - 535899.14534895 553819.03817939 571783.3052721 589784.56266012 - 607816.61836022 625874.29578468 643953.27746286 662049.96890339 - 680161.38144647 698272.79398955] -\end{verbatim} - -\subsubsection{gitm\_plot\_rout.py} - -Common routines used to format and analyze GITM data. - -\begin{itemize} -\item[]{{\bf choose\_contour\_map: } A routine to choose an appropriate color map based on whether the plot will be black and white or color, and whether data data range will be centered about zero or not.} -\item[]{{\bf add\_colorbar:} Add a color bar to a contour plot.} -\item[]{{\bf find\_order\_of\_magnitude: } Find the order of magnitude of a specified number.} -\item[]{{\bf center\_polar\_cap:} Adjust radial coordinates to produce a centered polar plot. Necessary for the northern hemisphere, where polar plots assume the radial (latitude) coordinates should be centered at zero instead of 90$^\circ$. This routine does not depend on SpacePy.} -\item[]{{\bf find\_data\_limits:} Find the upper and lower limits for a specified data key in a list of GITM data structures at a specified location (either single indices or the entire range are permitted for latitude, longitude, and altitude).} -\item[]{{\bf find\_data\_limits\_irange:} Find the upper and lower limits for a specified data key in a list of GITM data structures at a specified location range (upper and lower limits or the entire range are permitted for latitude, longitude, and altitude).} -\item[]{{\bf find\_data\_limits\_ivalues: } Establish the appropriate axis limits for a list of GitmBin files at a range or specific latitude, longitude, or altitude.} -\item[]{{\bf glon\_to\_localtime: } Compute the local time given a longitude and universal time.} -\item[]{{\bf localtime\_to\_glon:} Find the longitude at a specified universal time and local time.} -\item[]{{\bf find\_lon\_lat\_index:} Find the indexes for the location closest to a specified latitude and longitude.} -\item[]{{\bf retrieve\_key\_from\_web\_name:} Find a data key given a website-friendly version of data key names.} -\item[]{{\bf find\_alt\_index:} Find the index closest to the specified altitude. Altitude may be specified in km or m.} -\item[]{{\bf match\_cindi\_key: } A routine to retrieve a CINDI data key from a GITM key or vice versa.} -\item[]{{\bf add\_geomagnetic\_equator: } A routine to add a line showing the geomagnetic equator (specified by IGRF-10) to an existing plot. Line style and color may be specified.} -\item[]{{\bf add\_subsolar\_point: } A routine to find the location of the subsolar point at a specified Universal Time using the Pysolar routines. Returns the geographic location of the point and will also add a marker to a plot.} -\item[]{{\bf add\_solar\_terminator: } Computes the location of the solar terminator using the Pysolar routines. Returns numpy arrays of the geographic coordinates of the solar terminator and will also add a line denoting the solar terminator to a plot.} -\item[]{{\bf find\_sunside\_twilight\_sza:} A routine to find the maximum angular distance between the solar terminator and the sunlight side with conjugate flux tube feet in darkness using Pysolar routines. The solar zenith angle corresponding to the sunlight boundary is returned. The entire day is searched to identify the sunlight boundary given any degree of magnetic declination.} -\item[]{{\bf create\_contour\_input\_array:} Creates contour input at a specified location between GITM grid points.} -\item[]{{\bf create\_linear\_input\_array:} Creates linear input at a specified location between GITM grid points.} -\item[]{{\bf get\_meq\_offset: } Find the offset in degrees between the geographic and geomagnetic equators at a specified longitude.} -\end{itemize} - -This example shows how the index for a specified altitude can be found. Note that GITM saves altitude in meters. - -\begin{verbatim} -In [1]: import spacepy -In [2]: import gitm -In [3]: import gitm_plot_rout as gpr -In [4]: gdata = gitm.GitmBin(`3DALL_t021124_000000.bin') -In [5]: ialt = gpr.find_alt_index(gdata, 10, 10, 250.0, "km") -In [6]: print ialt, gdata['Altitude'][10,10,ialt] -27 254283.550238 -\end{verbatim} - -\subsubsection{solar\_rout.py} - -Routines that use Pysolar to find the location of the solar terminator and subsolar point. - -\begin{itemize} -\item[]{\bf subsolar\_point: } Finds the geographic location of the subsolar point at a specified Universal Time. -\item[]{\bf lat\_lon2spherical\_xyz: } Converts latitude and longitude to spherical coordinates. Assumes a spherical earth. -\item[]{\bf spherical\_xyz2lat\_lon: } Converts from spherical coordinates to geographic latitude and longitude, assuming a spherical earth. -\item[]{\bf get\_solar\_terminator\_xyz\_matrix: } Finds the location of the solar terminator in spherical coordinates. -\item[]{\bf get\_terminator\_lat\_lon\_coordinates: } Finds the location of the solar terminator in geographic coordinates using input from a solar-oriented spherical coordinate system. -\item[]{\bf get\_solar\_terminator\_lat\_lon: } Finds the location of the solar terminator at a specified time in geographic coordinates. -\end{itemize} - -\subsubsection{gitm\_loc\_rout.py} - -Routines used to find certain locations or values, as well as routines to align or match points in different data sets. - -\begin{itemize} -\item[]{\bf find\_nearest\_location: } A routine to find the nearest neighbor in a 1, 2, or 3D coordinate system. -\item[]{\bf find\_nearest\_value: } A routine to find the nearest neighbor to a specified value. -\item[]{\bf find\_nearest\_datetime: } A routine to find the nearest neighbor between datetime objects. -\item[]{\bf match\_running\_average: } Provide running averages at specified times and locations. -\item[]{\bf match\_running\_median: } Provide running medians at specified times and locations. -\item[]{\bf gitm\_inst\_loc: } A routine to align GITM and instrument data. -\item[]{\bf gitm\_net\_loc: } A routine to align GITM and data from a large network of instruments. -\item[]{\bf gitm\_time\_obs\_loc: } A routine to find, through interpolation, the GITM value at a specific observation location when only one spatial coordinate needs to be aligned. -\end{itemize} - -\subsubsection{gitm\_3D\_global\_plots.py} - -Routines to build and output GITM output variable contour (recommended) or scatter plots over a geographic range. Several different standard plot formats are available, and routines useful for creating custom figures are also included. The Earth's continental boundaries may be included in any output figure. If they are, shading in the night time region of the globe may also be included. - -\begin{itemize} -\item[]{{\bf gitm\_single\_3D\_image:} This is a basic visualization routine that creates a filled contour plot of a single output variable from a GITM 3D at a specified altitude or 2D bin file. The output variable is plotted as a function of latitude and longitude over the entire globe, though the latitude range may be limited. The output plot may be polar or rectangular and if the rectangular option is chosen, the geomagnetic equator may also be included in the output figure. Sample output of the electron temperature is shown in figure~\ref{gitm_3D_global_plots.fig}~(a) and~(b).} -\item[]{{\bf gitm\_single\_nsglobal\_3D\_image:} A quick way to examine GITM output at both poles. This routine creates two polar contour plots centered at the geographic northern and southern poles for a single output variable from a GITM 3D at a specified altitude or 2D bin file. The equatorial and polar latitude boundaries may both be specified, though they cannot change between hemispheres. Sample output of the electron temperature is shown in figure~\ref{gitm_3D_global_plots.fig}~(c)} -\item[]{{\bf gitm\_global\_3D\_snapshot:} A snapshot of a single GITM output over the entire globe. This routine creates two polar contour plots centered at the geographic northern and southern poles and extending to a specified latitude and a single rectangular plot containing the latitudes equatorward of this point for a single output variable from a GITM 3D at a specified altitude or 2D bin file. The geomagnetic equator may also be included in the output figure. Sample output of the electron temperature is shown in figure~\ref{gitm_3D_global_plots.fig}~(d)} -\item[]{{\bf gitm\_mult\_3D\_slices:} This routine creates a single plot containing multiple global contours of a GITM output variable from a 3D or 2D bin file at a list of specified altitudes. These plots may be either polar or rectangular, with or without the geomagnetic equator, and within a specified latitude range. Sample output of the electron temperature is shown in figure~\ref{gitm_3D_mult_plots.fig}.} -\end{itemize} - -\begin{figure} -\begin{center} -\subfigure[]{ -\noindent\includegraphics[width=.45 \textwidth]{Figures/plot_single_3D_image_polar.png} -} -\subfigure[]{ -\noindent\includegraphics[width=.45 \textwidth]{Figures/plot_single_3D_image_rect.png} -} -\subfigure[]{ -\noindent\includegraphics[width=.45 \textwidth]{Figures/plot_single_nsglobal_3D_image.png} -} -\subfigure[]{ -\noindent\includegraphics[width=.45 \textwidth]{Figures/plot_global_3D_snapshot.png} -} -\caption{GITM electron temperature at 456.63 $km$ altitude for: (a) northern latitudes, (b) over the entire globe, (c) over the entire globe, as viewed from the poles, and (d) as a global snapshot.} -\label{gitm_3D_global_plots.fig} -\end{center} -\end{figure} - -\begin{figure} -\begin{center} -\subfigure[]{ -\noindent\includegraphics[height=.9 \textheight]{Figures/plot_mult_3D_slices_polar.png} -} -\subfigure[]{ -\noindent\includegraphics[height=.9 \textheight]{Figures/plot_mult_3D_slices_rect.png} -} -\caption{GITM electron temperature at seven altitude slices for (a) northern latitudes and (b) the entire globe.} -\label{gitm_3D_mult_plots.fig} -\end{center} -\end{figure} - -This example shows how to reproduce Figure~\ref{gitm_3D_global_plots.fig}~(a). - -\begin{verbatim} -In [1]: import spacepy -In [2]: import gitm -In [3]: import gitm_3D_global_plots as g3d -In [4]: import matplotlib.pyplot as plt -In [5]: plt.ion() # This makes the plotting happen interactively -In [6]: gdata = gitm.GitmBin(`3DALL_t021124_000000.bin') -In [7]: title = "%s UT" % (gdata[`time']) -In [8]: f = g3d.plot_single_3D_image("polar", "eTemperature", gdata, title, - "example_polar_plot.png", True, 27, 90, 0) -\end{verbatim} - -\subsubsection{plot\_3D\_global.py} - -Routines to build contour or scatter plots over a geographic range. Several different standard plot formats are available, and routines useful for creating custom figures are also included. The Earth's continental boundaries may be included in any output figure. If they are, shading in the night time region of the globe may also be included. Input data must be provided in separate numpy arrays (1D or 2D for scatter plots, 2D for contour plots). - -\begin{itemize} -\item[]{{\bf plot\_single\_3D\_image:} This is a basic visualization routine that creates a filled contour or a colored scatter plot of a single output variable. The output variable is plotted as a function of latitude and longitude over the entire globe, though the latitude range may be limited. The output plot may be polar or rectangular and if the rectangular option is chosen, the geomagnetic equator may also be included in the output figure. If the polar option is used, the latitude range cannot extend beyond $\pm$ 90$^\circ$. If the rectangular option is used, the geomagnetic equator may also be plotted.} -\item[]{{\bf plot\_single\_nsglobal\_3D\_image:} A quick way to examine a variable at both poles. This routine creates two polar contour or scatter plots centered at the geographic northern and southern poles for a single output variable. The equatorial and polar latitude boundaries may both be specified, though they cannot change between hemispheres.} -\item[]{{\bf plot\_global\_3D\_snapshot:} A snapshot of an output variable over the entire globe. This routine creates two polar contour or scatter plots centered at the geographic northern and southern poles and extending to a specified latitude as well as a single rectangular plot containing the latitudes equatorward of this point. The geomagnetic equator may be output over the data.} -\item[]{{\bf plot\_mult\_3D\_slices:} This routine creates a single plot containing multiple global contour or scatter plots for a single variable at specific indices (corresponding to different altitude, universal times, \textit{et cetera}). These plots may be either polar or rectangular (with or without the geomagnetic equator). Sample output of the electron temperature is shown in figure~\ref{gitm_3D_mult_plots.fig}. The numpy arrays containing the data may be 2D or 3D for scatter plots or 3D for contour plots. Any dimension may contain the indices to iterate over for the subfigures.} -\item[]{{\bf plot\_nsglobal\_subfigure:} This routine creates a subfigure with two polar contour or scatter plots centered at the geographic northern and southern poles for a single output variable. The equatorial and polar latitude boundaries may both be specified, though they cannot change between hemispheres. This is used by plot\_single\_nsglobal\_3D\_image and may also be used to create a subplot with this format.} -\item[]{{\bf plot\_snapshot\_subfigure:} This routine creates a subfigure with two polar dials and a rectangular region showing the equatorial latitudes for a single output variable. This is used by plot\_global\_3D\_snapshot and may also be used to create a subplot with this format.} -\item[]{{\bf plot\_rectangular\_3D\_global:} This routine plots a single rectangular filled contour or colored scatter for an output variable as a function of latitude and longitude. Options exist to control the colorbar, ticks, labels, and more. A handle to the contour plot is returned to allow the output to be further manipulated depending on what other subplots are included in the output figure.} -\item[]{{\bf plot\_polar\_3D\_global:} This routine plots a single polar filled contour for a GITM output variable at a specified altitude index as a function of latitude and longitude. Title, colorbar, labels, and more may be specified using input options. A handle to the contour plot is returned to allow the output to be further manipulated depending on what other subplots are included in the output figure. The longitude at the top of the plot may also be specified, this allows one to ensure a specific local time is always located at the top of the dial using a routine like {\bf localtime\_to\_glon}.} -\end{itemize} - -\subsubsection{gitm\_alt\_plots.py} - -Routines to build and output GITM output variable linear and contour plots over an altitude range. Several different standard plot formats are available, and routines useful for creating custom figures are also included. - -\begin{itemize} -\item[]{{\bf gitm\_single\_alt\_image:} Creates a single linear or contour altitude plot.} -\item[]{{\bf gitm\_mult\_alt\_image:} Creates a figure with multiple linear or contour altitude plots.} -\item[]{{\bf gitm\_alt\_slices:} Creates a figure with a contour plot showing the altitude dependence of a quantity as a function of latitude or longitude with several linear altitude slices at specified locations. An example is shown in figure~\ref{gitm_alt_slices.fig}} -\end{itemize} - -\begin{figure} -\begin{center} -\noindent\includegraphics[width=\textwidth]{Figures/gitm_alt_slice_test_Te.png} -\caption{GITM electron temperature at a constant longitude with six latitude slices.} -\label{gitm_alt_slices.fig} -\end{center} -\end{figure} - -This example shows how to reproduce Figure~\ref{gitm_alt_slices.fig}. - -\begin{verbatim} -In [1]: import spacepy -In [2]: import gitm -In [3]: import gitm_alt_plots as gap -In [4]: import gitm_plot_rout as gpr -In [5]: import matplotlib.pyplot as plt -In [6]: plt.ion() # This makes the plotting happen interactively -In [7]: gdata = gitm.GitmBin(`3DALL_t021124_000000.bin') -In [8]: title = "%s UT" % (gdata[`time']) -In [9]: lat_index = list() -In [10]: lon_index = list() -In [11]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, -65.0, "degrees") -In [12]: lon_index.append(ilon) -In [13]: lat_index.append(ilat) -In [14]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, -45.0, "degrees") -In [15]: lat_index.append(ilat) -In [16]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, -5.0, "degrees") -In [17]: lat_index.append(ilat) -In [18]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, 5.0, "degrees") -In [19]: lat_index.append(ilat) -In [20]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, 45.0, "degrees") -In [21]: lat_index.append(ilat) -In [22]: (ilon, ilat) = gpr.find_lon_lat_index(gdata, 150.0, 65.0, "degrees") -In [23]: lat_index.append(ilat) -In [24]: f = gap.plot_alt_slices("eTemperature", gdata, lat_index, lon_index, - title, "example_alt_plot.png") -\end{verbatim} - -\subsubsection{plot\_alt\_profiles.py} - -Routines to build and output linear and contour plots over an altitude range. Several different standard plot formats are available, and use any numpy array as input. - -\begin{itemize} -\item[]{{\bf plot\_single\_alt\_image:} Creates a single linear or contour altitude plot.} -\item[]{{\bf plot\_mult\_alt\_image:} Creates a figure with multiple linear or contour altitude plots.} -\item[]{{\bf plot\_alt\_slices:} Creates a figure with a contour plot showing the altitude dependence of a quantity as a function of latitude or longitude with several linear altitude slices at specified locations.} -\item[]{{\bf plot\_linear\_alt:} Plots the the linear altitude dependence of a quantity, with altitude on the y-axis.} -\item[]{{\bf plot\_3D\_alt:} Plots the altitude dependence of a quantity as the function of another spatiotemporal coordinate with the spatiotemporal coordinate on the x-axis, altitude on the y-axis, and the desired quantity as a color contour.} -\end{itemize} - -\subsubsection{gitm\_comparison\_plots.py} - -Routines to make plots that compare GITM data with observations. The observational sources include satellites, ground-based receivers, and receiver networks. - -\begin{itemize} -\item[]{\bf extract\_data\_matched\_arrays: } Extract points from matched data arrays for elements where neither array contains a specified `bad' value. -\item[]{\bf extract\_gitm\_time\_arrays: } Routine to extract all positions with valid data from a GitmTime object and construct numpy arrays. A single universal time, longitude, latitude, and/or altitude may be specified. -\item[]{\bf plot\_net\_gitm\_comp: } A routine to create a plot comparing 2D GITM data (such as VTEC or $h_mF_2$) to observations taken from a network of instruments over the globe. The map format may be rectangular, polar, or a combination (provided by plot\_nsglobal\_subfigure or plot\_snapshot\_subfigure). The top subfigure shows the observations as a scatter figure, the middle subfigure shows the GITM data as a contour, and the bottom subfigure shows the difference between the two as a scatter plot. The difference must be computed outside of this program, and so may be the difference, absolute difference, percent difference, or any other type of comparison. An example is shown in Figure~\ref{teccomp.fig}. -\item[]{\bf plot\_sat\_gitm\_comp: } Routine to plot satellite and GITM data to show how a single physical quantity varies over the orbit. Four panels are included; the top panel shows the raw satellite data and the GITM data along the track. The second panel shows the matched GITM/satellite data. The third panel shows the difference between the satellite and GITM data. The fourth panel shows the percent difference 100*(sat-GITM)/sat. -\end{itemize} - -\begin{figure} -\begin{center} -\noindent\includegraphics[width=.9 \textwidth]{Figures/gitm_tec_comp.png} -\caption{Madrigal and GITM vertical TEC comparison.} -\label{teccomp.fig} -\end{center} -\end{figure} - -\subsubsection{load\_files.py} - -Routines to load certain types of data files into a dictionary of numpy arrays, where each data type is used to specify the dictionary keys. - -\begin{itemize} -\item[]{{\bf loadCINDIorbit\_ASCII: } Loads the Coupled Ion Neutral Dynamics Investigation ASCII files provided by the UT Dallas website.} -\item[]{{\bf loadMadrigalVTEC\_ASCII: } Loads the GPS TEC ASCII files provided by the Millstone Hill Madrigal site.} -\item[]{{\bf loadGITMsat\_ASCII: } Loads the satellite file used as input for a GITM run.} -\item[]{{\bf loadMadrigalVTEC\_HDF5:} Loads the GPS TEC HDF5 files provided by the Millstone Hill Madrigal site.} -\end{itemize} - -\subsubsection{read\_files.py} - -Routines to read certain file formats and load the data into a dictionary of numpy arrays, where each data type is used to specify the dictionary keys. - -\begin{itemize} -\item[]{{\bf loadASCII\_data\_header: } Loads an ASCII file with header lines denoted by a `\#' .} -\item[]{{\bf loadASCII\_data\_hline: } Loads an ASCII file with a specified number of header lines.} -\item[]{{\bf loadASCII\_index\_profile: } Loads an ASCII file with header lines denoted by a `\#' that has been broken up into indexed blocks (blocks separated by double newlines, or indexes as specified by gnuplot). The indexed structure is maintained in the output dictionary by providing a list of numpy arrays for each data column.} -\item[]{{\bf load\_multASCII\_data:} Loads multiple ASCII files into a single output dictionary.} -\item[]{{\bf loadnetCDF\_data: } Loads netCDF files into an output dictionary.} -\item[]{{\bf combine\_data\_dictionaries: } Combines multiple data dictionaries into a single dictionary, including only the data keys common to all of the inputted data dictionaries.} -\end{itemize} - -\subsubsection{read\_gps\_bin.py} - -A script to read a VMR GPS binary file, providing data at a specified Universal Time. - -\begin{itemize} -\item[]{\bf GpsFile: } Class containing all of the data from the VMR GPS binary file. - \begin{itemize} - \item[]{\bf read\_header: } Reads the VMR GPS binary file header, allowing data to be easily located as desired. - \item[]{\bf read\_time: } Read in all the GPS data at the specified Universal Time. The specified time and the file times do not have to be perfectly aligned, as long as the specified time falls between the first and last time in the GPS file, the data with the closest temporal proximity will be returned. - \end{itemize} -\end{itemize} - -\subsubsection{write\_files.py} - -Routines to write output files. - -\begin{itemize} -\item[]{\bf writeASCII\_file: } A routine to create an ASCII file from a string or list of strings. Will overwrite any file of the same name that already exists. -\item[]{\bf writeASCII\_data\_w\_sorttext: } A routine to create an ASCII file from a data dictionary of dictionaries. The first layer of keys is used to provide the data columns, the second layer is output as additional data column(s) where the keys are output as strings. Datetime columns are output as two strings, one containing the date information and a second one containing the time of day information. -\end{itemize} - -\subsubsection{plot\_stats.py} - -Routines to compute and plot common statistics. - -\begin{itemize} -\item[]{\bf add\_stat\_to\_line: } Computes the moments, first through third quartiles, and mode(s) (as desired) for a dataset and outputs the statistics as a formatted text line that can be output to a file and in a list. -\item[]{\bf add\_stat\_box: } Computes the moments, first through third quartiles, and mode(s) (as desired) for a dataset and outputs the statistics in a text box onto a plot and in a list. -\item[]{\bf plot\_hist\_w\_stats: } Calculates and plots a histogram of a specified dataset, as well as the moments, first through third quartiles, and mode(s) (as desired). -\item[]{\bf plot\_lat\_lt\_stats: } Calculates and plots histograms and statistics for a specified dataset broken up into latitude and local time regions. -\item[]{\bf lat\_lt\_stat\_lines: } Calculates statistics for a specified dataset broken up into latitude and local time regions, providing a formatted string with the statistics for each region taking up a line. -\end{itemize} - -\subsubsection{gitm\_movie\_script.py} - -This is a python script that can be run either from ipython using the command {\tt run gitm\_movie\_script.py} or the command line using the command {\tt python gitm\_movie\_script.py}. Input to this program is prompted interactively, and includes: - -\begin{itemize} -\item{{\tt Ordered list of GITM binary files:} A list of GITM binary files in chronological order (or whatever other order the movie should be played in).} -\item{{\tt GITM plot type (rectangular, polar, nspolar, snapshot):} The keyword for the desired plot type. These are the plot types shown in figure~\ref{gitm_3D_global_plots.fig}, where polar corresponds to panel (a), rectangular to panel (b), nspolar to panel (c), and snapshot to panel (d).} -\item{At this point, the routine enters a while-loop to allow multiple movies to be made for the same list of GITM binary files} - \begin{itemize} - \item{{\tt GITM key to plot on z axis (eg Temperature):} The data key corresponding to the data type to plot on the z axis. A list of data keys can be found by typing `{\tt gdata.keys()}' into ipython after loading one of the listed GITM binaries.} - \item{{\tt Altitude to plot z value at (eg 250):} Altitude to plot, may be specified in km or m. For 2D parameters, a value must be entered, but doesn't matter.} - \item{{\tt Units of altitude (km or m):} Units of altitude entered above.} - \item{{\tt Use map of Earth? (empty for False):} Enter any value to include a Basemap plot of the earth, enter a carriage return to exclude the map.} - \item{The latitude limits needed depend on the plot type} - \begin{itemize} - \item{{\bf nspolar} {\tt Polar latitude limit (degrees):} Specify the polar latitude limit (positive, same for both hemispheres).} - \item{{\bf nspolar} {\tt Equatorial latitude limit (degrees):} Specify the equatorial latitude limit (positive, same for both hemispheres).} - \item{{\bf snapshot} {\tt Polar latitude limit (degrees):} Specify the polar latitude limit (positive, same for both hemispheres).} - \item{{\bf polar/rectangular} {\tt Northern latitude limit (degrees):} Specify the northernmost latitude (may be negative).} - \item{{\bf polar/rectangular} {\tt Southern latitude limit (degrees):} Specify the southernmost latitude (must be smaller/more negative than the northernmost limit)} - \end{itemize} - - \item{{\tt Load another z axis key? (empty for False):} Enter any value to include another movie or, enter a carriage return finish.} - \end{itemize} -\end{itemize} - -With this information, movies with appropriate z-variable ranges will be plot as .png files and combined into a movie using FFmpeg. The image and movie files will be named using the plot type, z parameter, and altitude to distinguish them. - - - - - - - diff --git a/srcDoc/plotters.md b/srcDoc/plotters.md new file mode 100644 index 00000000..5b5dc436 --- /dev/null +++ b/srcDoc/plotters.md @@ -0,0 +1,124 @@ + +# Plotters + +## gitm_plot_simple.py + +This code will make simple rectangular plots in: + +- altitude (longitude vs latitude): '-cut=alt -alt=value' +- longitude (latitude vs altitude): '-cut=lon -lon=value' +- latitude (longitude vs altitude): '-cut=lat -lat=value' + +You can set the variable to plot as a number. To see the variable mapping between numbers and names, you can run the code with '-list'. You can set the max and min value for the colorbar if you would like, but setting -maxi and -mini. + + usage: gitm_plot_simple.py [-h] [-list] [-var VAR] [-cut cut] [-alt alt] [-lat lat] [-lon lon] + [-log] [-mini MINI] [-maxi MAXI] + filelist [filelist ...] + + Plot Aether / GITM model results + + positional arguments: + filelist list files to use for generating plots + + options: + -h, --help show this help message and exit + -list list variables in file + -var VAR variable to plot (number) + -cut cut alt,lat,lon : which cut you would like + -alt alt altitude : alt in km (closest) + -lat lat latitude : latitude in degrees (closest) + -lon lon longitude in degrees (closest) + -log plot the log of the variable + -mini MINI manually set the minimum value for the plots + -maxi MAXI manually set the maxiumum value for the plots + +## gitm_plot.py + +This code is a bit more sophisticated, adding a bunch of additional functionality: + +- It can make cuts in alt, lat, and lon, as above. +- The alt cut plots add circles for the northern and southern polar regions. These can be removed with the flag '-nopole'. Additionally, if you only want a polar plot, you can use the flag '-north' or '-south'. +- TEC and O/N2 can be plotted by using the flags '-tec' or '-on2'. You can't set the both at the same time. +- You can overplot winds by setting the flag '-winds'. The code tries to figure out whether you want neutral winds or ion drifts by looking at the variable number and seeing if the main variable to plot is a neutral or ion state. You can set the spacing between the wind vectors by setting '-nstep=value'. +- You can subtract a series of files from another series of files. If the '-backdir=/path/to/baseline/run' is set, it will look into this directory and try to find matching files to subtract. If you set '-percent', it computes the percentage difference. +- If a series of images is made (by feeding a bunch of files), you can make a movie by setting the flag '-movie'. You can set the framerate ('-rate') and type of movie ('-mkv', '-mp4', '-gif'). You need ffmpeg to actually use this feature. +- The code can integrate or calculate the average of the slice(s) and then plot those out to a file by setting '-timeplot'. Additionally, a logfile can be created by setting '-timefile=log_file_name' to output those means or integrals out to the log file. + + usage: thermo_plot.py [-h] [-list] [-timeplot] [-mean] [-timefile TIMEFILE] [-label] + [-color {default,red}] [-var VAR] [-cut cut] [-ext {png,jpg,pdf}] + [-hiwind HIWIND] [-winds] [-nstep nstep] [-nopole] [-north] [-south] + [-alt alt] [-lat lat] [-lon lon] [-alog] [-IsLog] [-mini MINI] [-maxi MAXI] + [-percent] [-diff] [-backdir backdir] [-mkv] [-mp4] [-gif] [-movie] [-tec] + [-on2] [-rate RATE] + filelist [filelist ...] + + Plot Aether / GITM model results + + positional arguments: + filelist list files to use for generating plots + + options: + -h, --help show this help message and exit + -list list variables in file + -timeplot Plot integrated (or mean) value vs. time + -mean Plot mean value instead of integrated value + -timefile TIMEFILE output filename for timeline file + -label Add label (e.g., (a), (b)..) to title + -color {default,red} set color bar + -var VAR variable to plot (number) + -cut cut alt,lat,lon : which cut you would like + -ext {png,jpg,pdf} plot type file extention + -hiwind HIWIND HIWIND file to plot location + -winds overplot winds + -nstep nstep number of steps between wind quivers + -nopole dont plot polar regions + -north only plot northern hemisphere results + -south only plot southern hemisphere results + -alt alt altitude : alt in km (closest) + -lat lat latitude : latitude in degrees (closest) + -lon lon longitude in degrees (closest) + -alog plot the log of the variable + -IsLog plot the log of the variable + -mini MINI manually set the minimum value for the plots + -maxi MAXI manually set the maxiumum value for the plots + -percent plot percentage difference of files + -diff plot difference of files (2 files needed) + -backdir backdir Subtract files in this directory + -mkv movie format = mkv + -mp4 movie format = mp4 + -gif movie format = gif + -movie Make a movie out of results + -tec plot total electron content (TEC) + -on2 plot O/N2 ratio + -rate RATE framerate for movie + +In order to run this code, you need to install aetherpy, which can be obtained [here](https://github.com/aaronjridley/aetherpy). The 'develop' branch is fully supported, so please switch to that branch ('git checkout develop') and follow the README.md file to install it. It should be straightforward to install. + +## Aetherpy + +Aetherpy is a python package for plotting Aether model results, but we have modified it so that it will support GITM files also. Aetherpy can be obtained [here](https://github.com/aaronjridley/aetherpy). The 'develop' branch is fully supported, so please switch to that branch ('git checkout develop') and follow the README.md file to install it. It should be straightforward to install. + +There are plotters in aetherpy which are useful but somewhat coomplicated. We are working on these to make them less complicated and more functional. + +## PyITM + +We are working on a new repository for plotting IT modeling results, and have put it [here](https://github.com/GITMCode/PyITM). This is relatively new. + +This code base is aimed at getting people ramped up to plotting and analysis quickly, so we are aiming for the codes to be relatively simple and easy to use. In addition, we are trying to make functions short and reusable so that they can be taken from these codes and used again (for example, the 'gitm_plot_simple.py' code is almost completely stolen from these functions and was created in about an hour from this framework.) + +## Data-Model Comparison Tools + +Some codes that have been provided to allow data-model comparisons to be made include the following below. For each, to get more information, run them with a '-h'. We don't provide this data to you - it is up to you to download and put this data somewhere that the codes can find it. For almost all of these files, the path to the data is hardcoded into the file, so you will have to edit the file and replace the location of the data to whereever you install the data. + +- thermo_goce.py: This code will compare GITM 3DALL files to GOCE measurements of densities and winds. Since GOCE was only available between late 2009 - 2013, if it doesn't find GOCE files, it will search for CHAMP files. If those are not available, it will search for SWARM files. To download (for example) CHAMP data, you can use the command: +```bash +wget --no-parent -r --cut-dirs=3 ftp://thermosphere.tudelft.nl/version_01/CHAMP_data/ +``` +Other data types like this can be found on the same ftp site. + +- thermo_guvi.py: This code will compare the GITM 3DALL files to (post 2006) GUVI O/N2. + +- thermo_vista.py: This code will read in and do some crude comparisons between GITM and VISTA TEC. It is a work in progress. + +- thermo_hiwind.py: This code will compare the HIWIND FPI results (for extremely specific times in 2011 and 2018) to 3DALL results. + diff --git a/srcDoc/postprocessing.md b/srcDoc/postprocessing.md new file mode 100644 index 00000000..5cb5bcb5 --- /dev/null +++ b/srcDoc/postprocessing.md @@ -0,0 +1,162 @@ +# Postprocessing + +GITM stores outputs at a cadence specified in the input `UAM.in` file (in #SAVEPLOTS). When +running at each `DtOutput`, each processor writes its own (block) file for each output type +(`3DALL`, `2DANC`, etc.), plus the first processor writes a header file. This creates +an extremely large number of files on long runs across many cores. To make the +number of files more manageable and easier to read, they are post-processed into +`.bin` files, one for each output type at each `DtOutput`. This is different than other codes that write all of the output for all timesteps into a single file (so that file can be huge), or that writes different files for different states. GITM's post-processor writes all of the requested variables to one file for each time-step. + +When running `make rundir`, a file is placed within the `run/` folder called +`post_process.py` which is the entrypoint for postprocessing. This turns the raw +GITM outputs from this: + +```bash +> ls UA/data + 3DALL_t021221_000000.b0001 3DALL_t021221_000000.header 3DALL_t021221_000500.b0004 + 3DALL_t021221_000000.b0002 3DALL_t021221_000500.b0001 3DALL_t021221_000500.header + 3DALL_t021221_000000.b0003 3DALL_t021221_000500.b0002 log00000002.dat + 3DALL_t021221_000000.b0004 3DALL_t021221_000500.b0003 run_information.txt +``` + +Into this: + +```bash +> ls UA/data + 3DALL_t021221_000000.bin 3DALL_t021221_000500.bin log00000002.dat run_information.txt +``` + +## post_process.py Usage + +`post_process.py` supports burst processing (process existing files & exit), or +can watch for new outputs for a specified duration and process new outputs as +they are created. The output `.bin` files can be moved to a remote system, +tarred, and/or exist alongside the raw outputs. + +This means that there are essentailly two ways of running the post-processor: +- Once the run is completed, run it and post process all of the files at once. +- Run it after starting the simulation, so it runs in parallel to the simulation. This post processes the output files as the code is running, so that the files should be post processed soon after GITM is done running. + +The help message for `post_process.py`: + +``` +./post_process.py -h + usage: post_process.py [-h] [-remotefile REMOTEFILE] [-user USER] [-server SERVER] + [-dir DIR] [-sleep SLEEP] [-totaltime TOTALTIME] [-q] [-v] + [-norm] [-tgz] + + Post process and (optionally) move model results. + - This functions similar to pGITM.py, but can copy files to + a remote location, or postprocess files as they are created. + + options: + -h, --help show this help message and exit + -remotefile REMOTEFILE + File that contains info. about remote system + -user USER remote user name (default none) + -server SERVER remote system name (default none) + -dir DIR remote directory to use (default none) + -sleep SLEEP how long to sleep between loops in seconds, (default 300) + -totaltime TOTALTIME specify how long to run in total in hours, (default 0 - only run + once) + -q Run with verbose turned off + -v Run with verbose + -norm don't remove any files + -tgz tar and zip raw GITM file instead of process +``` + +!!! note "Post-processing Speed" + + The post_process.py code is relatively slow - it was written to be more robust and to be clean and not fast. If extremely fast post processing is desired, the older fortran post processor (driven by a shell script) can be used. This is not the recommended way of doing things, but it can be much faster. The old post processor executable can be created by running `make POST` from GITM's root folder (`GITM/`). If this is done before `make rundir`, it will automatically be copied. Otherwise it must be linked to `run/` manually. + + The python post-processor will use `PostGITM.exe` if it is found in `run/`. This is not the default behavior as some systems limit which programs can be run from login nodes (but don't seem to limit python yet!). + +One of the benefits of post_process.py is that it can post process the files and then scp them over to another system. In order to do this, you need to have keyless entry setup, so that files can be transferred without entering a password. The machine name, user name, and directory to move the run into have to be passed into the post_process.py script, which is done with a 'remotefile'. If the python code finds this file, it will read it and start moving files. Specifically, the post processor: +- checks to see if the directory on the remote system exists. If not, it tries to create it. +- post processes any files that need to be post processed in UA/data. +- pushes the UA/data/*bin files over to the remote system. +- checks one-by-one to see if the files exist on the remote system. If the file exists on the remote system, it removes it from the UA/data directory on the compute node. +- pushes supplemental files (like log files and run files) to the remote system. +- if the processing time has not expired, it waits a give amount of time (5 minutes by default) and loops. If the processing time has been exceeded, it exists. + +### Arguments + +#### remotefile + +Path to a file with information on the remote system to copy files to. This is +useful when running on a remote system with storage limitations such that files +can be copied externally faster than they are created. Within the `remotefile`, +three lines are checked and should contain: + +``` +username +hostname +/path/to/remote/directory +``` + +This information is used in a rsync command to copy the files, with the form +`rsync [output files] username@hostname:/path/to/remote/directory`. + +It is not necessary to use a `remotefile` and it is also possible to specify +these three strings as individual arguments. + +#### user + +Username to use when copying files to a remote location. + +#### server + +Server/hostname to move `.bin` files to. As the script uses `rsync` to copy +these files, it is possible to use a hostname alias from `~/.ssh/config` as the +server. + +#### dir + +Path on remote server to move post-processed files to. If the final directory +does not yet exist, it will be created. + +#### sleep + +This sets the time, in seconds, to wait in between checking for new files. This +is only used if `-totaltime` is set. The default value is 300 seconds, or 5 +minutes. + +#### totaltime + +`-totaltime` sets the maximum amount of time this script should run for, in +hours. The default value is 0 hours, so the script will run once and exit. The +script will continue running until `totaltime` has elapsed, even if the run has +finished, so care should be taken to estimate the actual time a run will take. + +#### norm + +`-norm` means no-rm, and if specified, will prevent the automatic removal of the +raw outputs. + +#### tgz + +`-tgz` tells the script to not post process the files at all, but to tar and zip them together. They can then be post-processed on a different machine. This is somewhat CPU intensive and slow. The remote feature will work with these files, so that they can be automatically pushed to another system. (This was created when Pleiades would not allow post processing on head nodes. After using this for a while, we made the post processor code do what the fortran code does, so that this option is mostly moot now.) + +--- + +## Plotting + +For information on plotting, please see [the plotting description page](plotters.md). + + +## pGITM + +If the run is creating files faster than they are postprocessed, do not panic. + +GITM would create a `csh` script before the introduction of this Python script +which is still available. `pGITM` and `PostGITM.exe` use a Fortran backend +instead of post_process.py which is slow. The Fortran code should be much faster than +Python. + +To access these, run `make POST` from GITM's root folder. If this is run before +`make rundir`, they will be placed in `run/` without manual intervention. If +`run` has already been created and moved or renamed, they must be copied +manually. `post_process.py` will prefer to use the Fortran post-processor and +only use Scipy if it is not found. + +`pGITM` will only run one time and requires `csh` which doesn't seem to be available on systems by default anymore. The world has moved on. diff --git a/srcDoc/quickstart.tex b/srcDoc/quickstart.tex deleted file mode 100644 index 6adf32c7..00000000 --- a/srcDoc/quickstart.tex +++ /dev/null @@ -1,247 +0,0 @@ -\section{Extracting the code from a tar file} - -Create a new and empty directory, and open the tar file you received, -e.g.: -\begin{verbatim} -mkdir Gitm -cd Gitm -mv ../gitm.tgz . -tar -xvzf gitm.tgz -\end{verbatim} - -\section{Checking out the code with CVS} -\label{cvs.sec} - -If CVS (Concurrent Versions System) is available on your computer and -you have an account on the CVS server machine herot.engin.umich.edu, -you can use CVS to install the current or a particular version of the -code. First of all have the following environment variables: -\begin{verbatim} -setenv CVSROOT UserName@herot.engin.umich.edu:/CVS/FRAMEWORK -setenv CVS_RSH ssh -\end{verbatim} -where UserName is your user name on herot. Here it is assumed that you -use csh or tcsh. Also put these settings into your .cshrc file so it -is automatically executed at login. Alternatively, use -\begin{verbatim} -CVSROOT=UserName@herot.engin.umich.edu:/CVS/FRAMEWORK -export CVSROOT -CVS_RSH=ssh -export CVS_RSH -\end{verbatim} -under sh, ksh and bash shells, and also put these commands into your -.bashrc or .profile file so it is automatically executed at login. - -Once the CVS environment variables are set, you can download the -current (HEAD) version of the GITM distribution with -\begin{verbatim} -cvs checkout GITM2 -\end{verbatim} - -If you want a particular version, use -\begin{verbatim} -cvs checkout -r v2_0 GITM2 -\end{verbatim} -where v2\_0 is the it tag associated with the version. To download bug -fixes or new features, the -\begin{verbatim} -cvs update -\end{verbatim} -command can be used. See {\tt man cvs} for more information. - -A lot of times, you don't really want the {\tt GITM2} directory to -stay that name, since you might download a couple different version -(maybe one for development and one for runs). Therefore, typically -you will: -\begin{verbatim} -mv GITM2 GITM2.Development -\end{verbatim} - -\section{Configuring and Making GITM} - -In order to compile GITM, you have to configure it first. The -configure script is inherited from the Space Weather Modeling -Framework. There are two primary reasons you need to do the -configure: (1) put the right {\tt Makefile} in the right place, -specifying the compiler and the version of MPI that you will use to -link the code; (2) put the right MPI header in the right place. It -also does some things like hard-codes the path of the source code into -the {\tt Makefile}. Currently the configure script is not capable of detecting the system and compilers available. Some examples for commonly used set-ups are shown below. Make sure that your .cshrc or .bashrc file is set up to detect the appropriate compilers before attempting to install GITM. - -Installing on Nyx: -\begin{verbatim} -./Config.pl -install -compiler=ifortmpif90 -earth -\end{verbatim} - -Installing with an Intel compiler and OpenMPI (such as Pleiades): -\begin{verbatim} -./Config.pl -install -compiler=ifort -earth -\end{verbatim} - -Installing a computer with gfortran and OpenMPI: -\begin{verbatim} -./Config.pl -install -compiler=gfortran -earth -\end{verbatim} - -Installing on a computer with gfortran and not using MPI: -\begin{verbatim} -./Config.pl -install -compiler=gfortran -earth -nompi -\end{verbatim} - -Sometimes people have a hard time with the ModUtilities.F90 file. If -you have errors with this file, try (for example): -\begin{verbatim} -./Config.pl -uninstall -./Config.pl -install -compiler=gfortran -earth -noflush -\end{verbatim} - -Don't forget, after configuring the Makefiles, you must still compile the code! -\begin{verbatim} -make -make test_earth -make install -\end{verbatim} - -\section{Running the Code} - -GITM requires a bunch of files to be in the right place in order to -run. Therefore, it is best to use the makefile to create a run -directory: -\begin{verbatim} -make rundir -mv run myrun -\end{verbatim} -where {\tt myrun} can be whatever you want. I will use {\tt -myrun} as an example. You can actually put this directory where ever -you want. On many systems (such as nyx), there is a {\tt nobackup} scratch disk that -you are supposed to use for runs, instead of your home directory. If you need to ensure that your home directory doesn't use too much space, moving the run directory onto a disk with more free space can solve the problem: - -\begin{verbatim} -make rundir -mv run /nobackup/myaccount/gitm/myrun -ln -s /nobackup/myaccount/gitm/myrun . -\end{verbatim} - -This creates a shortcut to the {\tt myrun} directory location on {\tt nobackup} in your GITM working directory. It allows you to treat the run directory as if it were a local directory, but it isn't! It also means that you don't have to compile and install GITM on the scratch disk, where program storage may not be allowed. - -Once you have created the run directory, you can run the default simulation, by: - -\begin{verbatim} -cd myrun -mpirun -np 4 GITM.exe -\end{verbatim} - -Or, if your system uses Mpiexec: - -\begin{verbatim} -cd myrun -mpiexec ./GITM.exe -\end{verbatim} - -This, hopefully should run GITM for Earth for 5 minutes. If it -doesn't work, then you might have mpi set up incorrectly. The default -is to allow you to run 4 blocks per processor, and the default {\tt -UAM.in} file is set up for 4 blocks, so you could try just running -GITM without mpi, just to see if it works at all: -\begin{verbatim} -./GITM.exe -\end{verbatim} -If that doesn't work, then it probably didn't compile correctly. -Hopefully, it just worked! - -\section{Post Processing} -\label{post_process.sec} - -GITM, by default, produces one file per block per output. If you are outputting often and you are running with many blocks, you can produce a huge number of files. To post process all of these files, simply: - -\begin{verbatim} -cd UA -./pGITM -\end{verbatim} - -This merges all of the files for one time period, for one file type into the same file. You can actually running this while the code is running, since GITM doesn't use old files, unless you are using the APPENDFILE option. As implied by the option's name, APPENDFILE opens an existing file and appends the most recent data to it. This feature is typically used only when running a satellite track though GITM. More information on the APPENDFILE option is located in Chapter~\ref{input.ch} Section~\ref{def_out.sec}. - -If you are NOT using satellites and NOT using APPENDFILE, then you are free and clear to use pGITM as often as you want during a run. To avoid deleting a file that GITM is currently writing to, it is recommended that pGITM be run as part of a script in which there is a five minute pause between executions. - -Another useful script, when running GITM on another system, is given in the block below. It occasionally executes an rsync between the computer that you run GITM on and your home computer. This allows you to bring over and evaluate the output files as they become available. To do this, execute pGITM at a set cadence (60 seconds in the example) while GITM is running and then rsync the remote and home directories (excluding all unprocessed files). Finally, remove the processed and rsynced files to prevent the remote directory from filling up. Be sure to replace yourname@home.computer with your user and computer names! This is a very simple, but very useful script. - -\begin{verbatim} -#!/bin/csh -rm -f stop -set LOC=$1 - -if (-f remoteloc) set LOC=`cat remoteloc` - -while (!(-f stop)) - rsync -vrae ssh log.* UAM.* imf* yourname@home.computer:$LOC - cd UA ; ./pGITM ; rsync --exclude '*.[bsh][0123ae][0123456789at]*' -vrae ssh d -ata yourname@home.computer:$LOC ; cd .. - sleep 60 -end -\end{verbatim} - -\section{The Code Won't Compile!!} -I'm sorry. I tried to make this work on many different platforms, but -sometimes machines are very specific, and it just doesn't work out of -the box. Here are some ideas on how to quickly get this thing -compiling. - -\subsubsection{Can't find the right Makefile.whatever} - -If make does not work, then there is probably a problem with not -finding the FORTRAN 90 compiler. The platform and machine specific -Makefiles are in srcMake. If you type: -\begin{verbatim} -uname -ls srcMake -\end{verbatim} - -If you don't see a file named something like Makefile.uname (where -uname is the output of the uname command), then you will have to build -a proper general Makefile. - -You will need a little a little information about your computer, like -what the mpif90 compiler is called and where it is located. Take a -look at srcMake/Makefile.Linux, and try to figure out what all of the -flags are for your system. Then create a srcMake/Makefile.uname with -the correct information in it. - -\subsubsection{The compiler doesn't recognize flag -x} - -You have an operating system that is recognized, but probably a -different compiler. In the srcMake/Makefile.uname file (where uname is -the output of the uname command), there is a line: - -OSFLAGS = -w -dusty - -You need to change this line to something more appropriate for your -compiler. Try deleting the flags and compile. If that doesn't work, -you will have to check the man pages of your compiler. - -\subsubsection{src/ModHwm.90 doesn't compile} - -Certain versions of gfortran (4.6 and later) may give the following error: - -\begin{verbatim} -src/ModHwm.f90:168.22: - - call HWMupdate(input,last,gfs,gfl,gfm,gvbar,gwbar,gbz,gbm,gzwght,glev,u - 1 -Error: Dummy argument 'ebz' of procedure 'hwmupdate' at (1) has an attribute - that requires an explicit interface for this procedure - -src/ModHwm.f90:168.22: - - call HWMupdate(input,last,gfs,gfl,gfm,gvbar,gwbar,gbz,gbm,gzwght,glev,u - 1 -Error: Dummy argument 'ebz' of procedure 'hwmupdate' at (1) has an attribute - that requires an explicit interface for this procedure -\end{verbatim} - -This is caused by the inputs in HWM. The latest incarnations of gfortran don't allow optional inputs that are not declared. More information about this can be found at: - -\begin{verbatim} -http://cosmocoffee.info/viewtopic.php?p=5136 -\end{verbatim} - -A solution to this problem is currently being sought. diff --git a/srcDoc/requirements.txt b/srcDoc/requirements.txt new file mode 100644 index 00000000..4ebc82de --- /dev/null +++ b/srcDoc/requirements.txt @@ -0,0 +1,7 @@ +mkdocs +mkdocs-material +mkdocs-mermaid2-plugin +markdown-captions +markdown-del-ins +markdown-katex +pymdown-extensions diff --git a/srcDoc/set_inputs.md b/srcDoc/set_inputs.md new file mode 100644 index 00000000..32fa10c0 --- /dev/null +++ b/srcDoc/set_inputs.md @@ -0,0 +1,747 @@ +# All Inputs + +When running, GITM looks for a file called `UAM.in` in the same directory as the +executable. This is where all of the settings for a run are read from. + +This plain-text file can contain comments and other notes which will not be used. Only +sections that begin with a `#` and match one of the GITM's settings are actually read. +GITM will print a message if it finds a line that begins with `#` that was not used. + +For example, in the following snippet, only the first block of text will be recognized +as a valid setting: + +``` +#LOGFILE +10.0 + +# LOGFILE +10.0 not read, space after # in first line + +#LOG_FILE +10.0 not read, key does not match + +#LOGFILE + 10.0 will cause error, space before value! + +``` + +This allows us to add comments or descriptors, if we wish. + +## General Configuration + +### STARTTIME + +This sets the starting time of the simulation. Even when you restart, +the starttime should be to the real start time, not the restart time. + + #STARTTIME + iYear (integer) + iMonth (integer) + iDay (integer) + iHour (integer) + iMinute (integer) + iSecond (integer) + +### ENDTIME + +This sets the ending time of the simulation. + + #ENDTIME + iYear (integer) + iMonth (integer) + iDay (integer) + iHour (integer) + iMinute (integer) + iSecond (integer) + + +### ALTITUDE + +For Earth, the AltMin is the only variable used here. The altitudes are +set to 0.3 times the scale height reported by MSIS, at the equator for +the specified F107 and F107a values.` + + #ALTITUDE + AltMin (real, km) + AltMax (real, km) + UseStretchedAltitude (logical) + +### GRID + +If LatStart and LatEnd are set to < -90 and > 90, respectively, then +GITM does a whole sphere. If not, it models between the two. If you want +to do 1-D, set nLons=1, nLats=1 in ModSizeGitm.f90, then recompile, then +set LatStart and LonStart to the point on the Globe you want to model. + + #GRID + nBlocksLon (integer) + nBlocksLat (integer) + LatStart (real) + LatEnd (real) + LonStart (real) + LonEnd (real) + + +### RESTART + + #RESTART + DoRestart (logical) + +### SAVEPLOT + +The DtRestart variable sets the time in between writing full restart +files to the UA/restartOUT directory. This sets the output files. The most common +type is 3DALL, which outputs all primary state variables. + +Other types include : 3DALL, 3DNEU, 3DION, 3DTHM, +3DCHM, 3DUSR, 3DGLO, 2DGEL, 2DMEL, 2DUSR, 1DALL, 1DGLO, 1DTHM, 1DNEW, +1DCHM, 1DCMS, 1DUSR. DtPlot sets the frequency of output + + #SAVEPLOT + DtRestart (real, seconds) + nOutputTypes (integer) + Outputtype (string, 3D, 2D, ION, NEUTRAL, ...) + DtPlot (real, seconds) + +### PLOTTIMECHANGE + +This allows you to change the output cadence of the files for a limited +time. If you have an event then you can output much more often during +that event. + +Specify the start and end time the new cadence will be used for, followed by the new Dt +for each output type. This example would be for two output types: + + #PLOTTIMECHANGE + yyyy mm dd hh mm ss ms (start) + yyyy mm dd hh mm ss ms (end) + DtOutputType1 (real, seconds) + DtOutputType2 (real, seconds) + + +### LOGFILE + +You really want a log file. They are very important. It is output in +UA/data/log\*.dat. You can output the log file at whatever frequency you +would like, but if you set dt to some very small value, you will get an +output every iteration, which is probably a good thing. + + #LOGFILE + DtLogFile (real, seconds) + +### CCMCFILENAME + +Typicaly file is named (e.g.) 1DALL_yymmdd_hhmmss.bin With this it will +be named 1DALL_GITM_yyyy-mm-ddThh-mm-ss.bin + + #CCMCFILENAME + UseCCMCFileName (logical) + + +### SAVEHIMEPLOT + + #SAVEHIMEPLOT + HIMEPlotLonStart (real) + HIMEPlotLonEnd (real) + HIMEPlotLatStart (real) + HIMEPlotLatEnd (real) + +### SATELLITES + +See [this page](common_inputs.md#satellite-section) for more details. + + #SATELLITES + nSats (integer - max = ', nMaxSats, ') + SatFile1 (string) + SatOutputtype1 (string, 0DUSR or 1DUSR or other) + DtPlot1 (real, seconds) + etc... + + +### APPENDFILES + +For satellite files, you can have one single file per satellite, instead +of one for every output. This makes GITM output significantly less +files. It only works for satellite files now. + + #APPENDFILES + DoAppendFiles (logical) + +## Drivers + +### F107 + +Sets the F10.7 and 81 day average F10.7. This is used to set the initial +altitude grid, and drive the lower boundary conditions. + + #F107 + f107 (real) + f107a (real - 81 day average of f107) + +### ELECTRODYNAMICS + +Sets the sources for, and the time for updating, the high-latitude (and low-latitude) +electrodynamic drivers, such as the potential and the aurora. + +See [the electrodynamics page](internals/electrodynamics.md) for more details + + #ELECTRODYNAMICS + AuroralModel [fta], fre, pem, ovation, hpi/ihp, amie, etc. + DtAurora (real, seconds [60.0]) + PotentialModel [weimer05], hepmay, amie, etc. + DtPotential (real, seconds [60.0])' + + +### HPI + +This sets the hemispheric power of the aurora. Typical it ranges from +1-1000, although 20 is a nominal, quiet time value. + + #HPI + HemisphericPower (real) + +### KP + +GITM will not use this unless the Foster electric +field model is used. + + #KP + kp (real) + + +### SOLARWIND + +This sets the driving conditions for the high-latitude electric field +models. This is static for the whole run, though. It is better to use +the MHD_INDICES command to have dynamic driving conditions. + + #SOLARWIND + bx (real) + by (real) + bz (real) + vx (real) + +### MHD_INDICES + +Use this for dynamic IMF and solar wind conditions. The exact format of +the file is discussed further in the manual. + + #MHD_INDICES + filename (string) + +### EUV_DATA + +This is for a FISM or some other solar spectrum file. + + #EUV_DATA + UseEUVData (logical) + cEUVFile (string) + +### AURORAMODS + +This is for modifying the aurora a bit. The NormalizeAuroraToHP variable +calculates the modeled hemispheric power and then normalizes it the +hemispheric power read in. AveEFactor - changes the aveE of the aurora +by factor IsKappaAurora - use a kappa instead of Maxwellian +AuroraKappa - kappa to use in the distribution + + #AURORAMODS + NormalizeAuroraToHP (logical) + AveEFactor (real) + IsKappaAurora (logical) + AuroraKappa (real) + +### AURORATYPES + +This is for using different types of aurora. Currently this is supported by Ovation & +AMIE. The first three options (diffuse, mono, wave) are for electrons only. + + #AURORATYPES + UseDiffuseAurora (logical) + UseMonoAurora (logical) + UseWaveAurora (logical) + UseIonAurora (logical) + +### USECUSP + +This is for specifying a cusp. + + #USECUSP + UseCusp (logical) + CuspAveE (real) + CuspEFlux (real) + +### AMIEFILES + + #AMIEFILES + cAMIEFileNorth (string) + cAMIEFileSouth (string) + +### USEREGIONALAMIE + +This is to set up a local region with specified potential from AMIE +files. Use Weimer potential elsewhere. AMIEBoundaryWidth is padded +outside of the region with the geographic lon and lat boundaries set +below. + + #USEREGIONALAMIE + UseRegionalAMIE (logical) + UseTwoAMIEPotentials (logical) + AMIETimeStart (yyyy mm dd hh mm ss) + AMIETimeEnd (yyyy mm dd hh mm ss) + AMIELonStart (real) + AMIELonEnd (real) + AMIELatStart (real) + AMIELatEnd (real) + AMIEBoundaryWidth (real) + +### INPUTTIMEDELAY + +Sets the time delay for the high latitude drivers and solar EUV inputs. + + #INPUTTIMEDELAY + TimeDelayHighLat (real, seconds) + TimeDelayEUV (real, seconds) + + +## Boundary and Initial Conditions + +### INITIAL + +This specifies the initial conditions and the lower boundary conditions. +For Earth, we typically just use MSIS and IRI for initial conditions. +For other planets, the vertical BCs can be set here. + + #INITIAL + UseMSIS (logical) + UseIRI (logical) + If UseMSIS is .false. then : + TempMin (real, bottom temperature) + TempMax (real, top initial temperature) + TempHeight (real, Height of the middle of temp gradient) + TempWidth (real, Width of the temperature gradient) + +### MSISTIDES + +This says how to use msis tides. The first argument is for using diurnal tide, the +second is for using semi-diurnal tide and the third is to use terdiurnal +tide. + + #MSISTIDES + UseMSISDiurnal (logical) + UseMSISSemidiurnal (logical) + UseMSISTerdiurnal (logical) + +### MSISOBC + +UseOBCExperiment - use MSIS \[O\] BC shifted by 6 months Only applicable +for MSIS00! MsisOblateFactor - alt = alt \* (1.0-f/2 + f\*cos(lat)) - +seems like -0.1 works well + + #MSISOBC + UseOBCExperiment (logical) + MsisOblateFactor (real) + +### MSIS21 + +This toggles between using MSIS00 (false) and MSIS-2.1 (true) + + #MSIS21 + UseMsis21 (logical) + + +### TIDES + +This says how to use tides. The first one is using MSIS with no tides. +The second is using MSIS with full up tides. The third is using GSWM +tides, while the forth is for experimentation with using WACCM tides. + + #TIDES + UseMSISOnly (logical) + UseMSISTides (logical) + UseGSWMTides (logical) + UseWACCMTides (logical) + UseHmeTides (logical) + +### GSWMCOMP + +If you selected to use GSWM tides above, you can specify which +components to use. + + #GSWMCOMP + GSWMdiurnal(1) (logical) + GSWMdiurnal(2) (logical) + GSWMsemidiurnal(1) (logical) + GSWMsemidiurnal(2) (logical) + +### USEPERTURBATION + + #USEPERTURBATION + UsePerturbation (logical) + +### USEBCPERTURBATION + +Use Boundary Condition Perturbation are a set of arguments for running WP-GITM. + + #USEBCPERTURBATION + UseBcPerturbation (logical) + If UseBcPerturbation = .true. then: + iTypeBcPerturb (int) + perturbation characteristics ... + +### GITMBCS + + #GITMBCS + UseGitmBCs + GitmBCsDir + +## Numerics + + +### STATISTICALMODELSONLY + +This command will skip pretty much all of the physics of GITM, and +will reinitialize the model with the MSIS, IRI, APEX, and Electrodynamics values at +the interval set in the second variable. If you want to compare a run to MSIS and +IRI, you can run GITM with this command and get output at exactly the +same cadence and locations, thereby allowing easier comparisons. The dt +can be set as low as needed, so you can run satellites through MSIS and +IRI. + + #STATISTICALMODELSONLY + UseStatisticalModelsOnly (logical) + DtStatisticalModels (real) + +### CFL + +The CFL condition sets how close to the maximum time step that GITM will +take. 1.0 is the maximum value. A value of about 0.75 is typical. If +instabilities form, a lower value is probably needed. + + #CFL + cfl (real) + + + +### LIMITER + +The limiter is quite important. It is a value between 1.0 and 2.0, with +1.0 being more diffuse and robust, and 2.0 being less diffuse and less +robust. + + #LIMITER + TypeLimiter (string) + BetaLimiter (real between 1.0-minmod and 2.0-mc) + +### NANCHECK + +This will turn on all of the NaN checks in the code! + + #NANCHECK + DoCheckForNans (logical) + +### DEBUG + +This will set how much information the code screams at you - set to 0 to +get minimal, set to 10 to get EVERYTHING. You can also change which +processor is shouting the information - PE 0 is the first one. If you +set the iDebugLevel to 0, you can set the dt of the reporting. If you +set it to a big value, you wont get very many outputs. If you set it to +a tiny value, you will get a LOT of outputs. UseBarriers will force the +code to sync up a LOT. + + #DEBUG + iDebugLevel (integer) + iDebugProc (integer) + DtReport (real) + UseBarriers (logical) + +### IONLIMITS + + #IONLIMITS + MaxVParallel (real, default=100 m/s) + MaxEField (real, default=0.1 V/m) + MinIonDensity (real, default=100 m^-3) + +### PHOTOELECTRON + + #PHOTOELECTRON + PhotoElectronHeatingEfficiency (real) + +### NEUTRALHEATING + + #NEUTRALHEATING + NeutralHeatingEfficiency (real) + +### DON4SHACK + + #DON4SHACK + DoN4SHack (logical) + + +### VERTICALSOURCES + + #VERTICALSOURCES + MaximumVerticalVelocity (real) + +### AUSMSOLVER + +This dictates whether to use the AUSM solver (T) or the Rusanov solver (F) + + #AUSMSOLVER + Use AUSM Solver (logical) + + +### USEIMPLICITIONMOMENTUM + + #USEIMPLICITIONMOMENTUM + UseImplicitFieldAlignedMomentum (logical) + +### USEIMPROVEDIONADVECTION + + #USEIMPROVEDIONADVECTION + UseImprovedIonAdvection (logical) + UseNighttimeIonBCs (logical) + MinTEC (real) + +### USETESTVISCOSITY + + #USETESTVISCOSITY + TestViscosityFactor (real) + +### FIXEDDT + +If you would like to force GITM to take a fixed dt you can use this. It +will try to take that fixed dt, unless the CFL condition is violated. + + #FIXEDDT + FixedDt (real) + +## Physics + + +### THERMO + + #THERMO + UseSolarHeating (logical) + UseJouleHeating (logical) + UseAuroralHeating (logical) + UseNOCooling (logical) + UseOCooling (logical) + UseConduction (logical) + UseTurbulentCond (logical) + UseIRHeating (logical) + +### THERMALDIFFUSION + + #THERMALDIFFUSION + KappaTemp0 (thermal conductivity, real) + +### THERMALCONDUCTION + + #THERMALCONDUCTION + ThermalConduction_AO2 (Conduction A(O2): 3.6e-4, real) + ThermalConduction_AO (Conduction A(O): 5.6e-4, real) + ThermalConduction_s (Conduction s: 0.75, real) + + +### DIFFUSION + +If you use eddy diffusion, you must specify two pressure levels - under +the first, the eddy diffusion is constant. Between the first and the +second, there is a linear drop-off. Therefore The first pressure must be +larger than the second! + + #DIFFUSION + UseDiffusion (logical) + EddyDiffusionCoef (real) + EddyDiffusionPressure0 (real) + EddyDiffusionPressure1 (real) + +### FORCING + + #FORCING + UsePressureGradient (logical) + UseIonDrag (logical) + UseNeutralFriction (logical) + UseViscosity (logical) + UseCoriolis (logical) + UseGravity (logical) + +### MODIFYPLANET + + #MODIFYPLANET + RotationPeriodInput (real) + DaysPerYearInput (real) + DaysPerYearInput (real) + +### DYNAMO + + #DYNAMO + UseDynamo (logical) + DynamoHighLatBoundary (real) + nItersMax (integer) + MaxResidual (V,real) + IncludeCowling (logical) + DynamoLonAverage (real) + +### IONFORCING + + #IONFORCING + UseExB (logical) + UseIonPressureGradient (logical) + UseIonGravity (logical) + UseNeutralDrag (logical) + +### FIXTILT + + #FIXTILT + IsFixedTilt (logical) + +### DIPOLE + + #DIPOLE + MagneticPoleRotation (real) + MagneticPoleTilt (real) + xDipoleCenter (real) + yDipoleCenter (real) + zDipoleCenter (real) + +### APEX + + #APEX + UseApex (logical) + Sets whether to use a realistic magnetic + field (T) or a dipole (F) + + +## Misc + +### CPUTIMEMAX + +This sets the maximum CPU time that the code should run before it starts +to write a restart file and end the simulation. It is very useful on +systems that have a queueing system and has limited time runs. +Typically, set it for a couple of minutes short of the max wall clock, +since it needs some time to write the restart files. + + #CPUTIMEMAX + CPUTimeMax (real) + + +### PAUSETIME + +This will set a time for the code to just pause. Really, this should +never be used. + + #PAUSETIME + iYear iMonth iDay iHour iMinute iSecond + +### ISTEP + +This is typically only specified in a restart header. If you specify it +in a start UAM.in it will start the counter to whatever you specify. + + #ISTEP + iStep (integer) + + + +### TSIMULATION + +This is typically only specified in a restart header. It sets the offset +from the starttime to the currenttime. Should really only be used with +caution. + + #TSIMULATION + tsimulation (real) + +### DUSTDATA + + #DUST + cDustFile + cConrathFile + +### OVERWRITEIONOSPHERE + + #OVERWRITEIONOSPHERE + DoOverwriteIonosphere + DoOverwriteWithIRI + DoOverwriteWithSami + SamiInFile + + + +### DUST + + #DUST + TauTot + Conrnu + +### DAMPING + +This is probably for damping vertical wind oscillations that can occur +in the lower atmosphere. + + #DAMPING + UseDamping (logical) + +### GRAVITYWAVE + + #GRAVITYWAVE + UseGravityWave (logical) + + +### NEWSTRETCH + + #NEWSTRETCH + Poleward Edge of Stretch Region (real, degrees) + StretchWidth (real, 1.0-20.0, deg) + StretchingPercentage (real, 0-1) + Example (auroral zone): + #NEWSTRETCH + 65.0 ! location of minimum grid spacing + 5.0 ! Width of stretched region + 0.6 ! Amount of stretch 0 (none) to 1 (lots) + +### STRETCH + + #STRETCH + ConcentrationLatitude (real, degrees) + StretchingPercentage (real, 0-1) + StretchingFactor (real) + Example (no stretching): + #STRETCH + 65.0 ! location of minimum grid spacing + 0.0 ! Amount of stretch 0 (none) to 1 (lots) + 1.0 + +### TOPOGRAPHY + + #TOPOGRAPHY + UseTopography (logical) + AltMinUniform (real) + +### RCMR + + #RCMR + Input data type to assimilate (RHO/VTEC) + Output variable to drive (F107/PHOTOELECTRON) + Initial output estimate + Number satellites to assimilate + 1st satellite index to assimilate + 2nd satellite index to assimilate + etc... + +### DART + + #DART + useDART (integer, {default 0=no}, 1=master ensemble member, 2=slave ens.) + + +### LTERadiation + + #LTERadiation + DtLTERadiation (real) + + diff --git a/srcDoc/set_inputs.tex b/srcDoc/set_inputs.tex deleted file mode 100644 index 944898cb..00000000 --- a/srcDoc/set_inputs.tex +++ /dev/null @@ -1,883 +0,0 @@ -\section{Principle Input} -\label{uam.sec} - -{\tt UAM.in} contains the majority of the variables that can be changed in a GITM run. Very few of these input options are required as input, all other options will default to values specified by the ModInputs.f90 subroutine, which can be found in the {\tt src} directory. Example {\tt UAM.in} files for various types of runs are made available in the {\tt srcData} directory. - -This input file can be altered at will without the need to recompile the code either ``by hand" or using a script such as {\tt makerun.pl}. This script, which is located on {\tt harot.engin.umich.edu:/bigdisk1/bin}, takes command line input to create a UAM.in file and any desired auxiliary files, discussed in more detail in section~\ref{aux.sec}, using locally stored data. - -The following sections present the GITM input options grouped by type. This is not the order you will find them in a typical {\tt UAM.in} file or the order you will find the input processed in {\tt ModInputs.f90}. This reinforces the flexibility of the input file, which doesn't care what order the input options are specified with one exception. The starting and ending times (discussed in section~\ref{required.sec}) \textit{must} be defined before any solar or geomagnetic indices (discussed in section~\ref{indices.sec}). It is probably a good practice to begin any {\tt UAM.in} file either with the output options (discussed in section~\ref{def_out.sec}) or the starting and ending times. - -%% - -\subsection{Required Inputs} -\label{required.sec} - -The only inputs that must be specified are the starting and ending times. These times are specified using universal time blocks that specify the date (A.D.) and time of day. Remember, these two blocks must be specified before any of the solar or geomagnetic index blocks, outlined in section~\ref{indices.sec}. - -\subsubsection{TIMESTART} -\label{starttime.sec} - -This input block sets the starting time of the simulation. Although the input time can be defined down to the second, construction scripts will ignore temporal units smaller than a day since a lead time of a day is typically desired for any model run. Shorter runs should only used to test the model compilation. - -GITM can be set to restart after pausing. This has no effect on TIMESTART, these values should always contain the real starting time, not the restart time. - -\begin{verbatim} -#TIMESTART -(integer) year -(integer) month -(integer) day -(integer) hour -(integer) minute -(integer) second -\end{verbatim} - -\subsubsection{TIMEEND} -\label{endtime.sec} - -This input block sets the ending time of the simulation. As mentioned above, GITM runs typically last a minimum of two days (with one day as start-up to allow the processes to settle into equilibrium) and so the hour, minute, and second options are commonly ignored. - -\begin{verbatim} -#TIMEEND -(integer) year -(integer) month -(integer) day -(integer) hour -(integer) minute -(integer) second -\end{verbatim} - -\subsubsection{END} -\label{end.sec} - The inclusion of this keyword will cause GITM to stop reading the {\tt UAM.in} file. This can allow one to save typical input options not used in one particular run for another run by moving them after this key. - - \begin{verbatim} - #END - \end{verbatim} - -%% - -\subsection{Temporal Boundaries} -\label{time.sec} - -The input options described here are optional and used to set the temporal boundaries in GITM, including the processing times. - -\subsubsection{PAUSETIME} -\label{pausetime.sec} - -This input option sets a time for the code to pause. There is no good reason to use this option. - -\begin{verbatim} -#PAUSETIME -(integer) year -(integer) month -(integer) day -(integer) hour -(integer) minute -(integer) second -\end{verbatim} - -\subsubsection{CPUTIMEMAX} -\label{cputimemax.sec} - -This sets the maximum CPU time that the code should run before it starts to write a restart file and end the simulation. It is very useful on systems that have a queueing system and has limited time runs. Typically, set it for a couple of minutes short of the maximum wall clock, since it needs some time to write the restart files. - -\begin{verbatim} -#CPUTIMEMAX -(real) CPUTimeMax -\end{verbatim} - -\subsubsection{CFL} -\label{cfl.sec} - -The CFL option defines how large a time step GITM will take. This is set as a fraction of the maximum time step, so 1.0 is the maximum value, while 0.75 is a typical value. If instabilities form during a model run, lowering this option is a good first step to take. - -\begin{verbatim} -#CFL -(real) cfl -\end{verbatim} - -\subsection{Defining Outputs} -\label{def_out.sec} - -The input option blocks described here are used to specify the level and type of verboseness. - -\subsubsection{LOGFILE} -\label{logfile.sec} - -Log files are very important and the LOGFILE input option allows the user to control how much information the GITM logfile will contain. This logfile is output into the {\tt UA/data/} directory in a file following a naming convention like {\tt log*.dat}. Although you can output the log file at whatever frequency you would like, setting the time-step to some very small value will allow GITM to produce a log output every iteration, which is a good thing. DtLogFile specifies this time-step in seconds. - -\begin{verbatim} -#LOGFILE -(real) DtLogFile -\end{verbatim} - -\subsubsection{DEBUG} -\label{debug.sec} - -This will set the level of GITM's verboseness. Set the iDebugLevel to 0 for minimal output and to 10 to retrieve \textit{everything}. You can also limit output to a specific processor using iDebugProc. The processors are named PE x, where PE indicates that you are tagging a processor and x is the zero offset integer indicating the processor number. So ``PE 0" would indicate that output from the first processor is desired. - -If you set the iDebugLevel to 0 (the default), you can set the debug report time step using DtReport. This time step is given in seconds. The final keyword in this input option, UseBarriers, forces the different nodes running the GITM code to sync up with each other frequently when employed. - -\begin{verbatim} -#DEBUG -(integer) iDebugLevel -(integer) iDebugProc -(real) DtReport -(logical) UseBarriers -\end{verbatim} - -\subsubsection{SATELLITES} -\label{satellites.sec} - -To improve model-data studies, GITM can output model results along the satellite paths. Any number of satellites may be flown through a GITM simulation. Output from the satellite paths is provided at the specified universal time, geographic latitude and longitude. Instead of confining the model output to the satellite altitude, simulated output is provided over the entire GITM altitude range. If RCMR is being run, the validity of the satellite index specified in that input block will be tested here. - -\begin{verbatim} -#SATELLITES -(integer) nSats -(string) SatFile(n) -(real) DtPlot(n) -\end{verbatim} -\vspace{-.1in} -\hspace{.6in} $\vdots$ -\vspace{.1in} - -To fly several satellites through GITM, the user must set nSats, SatFile(n), and DtPlot(n) for each satellite. nSats specifies the number of satellites, SatFile(n) gives the name of the satellite flight path file (discussed in more detail in section~\ref{sat_aux.sec}), and DtPlot(n) specifies the time-step for the GITM satellite output in seconds. The following verbatim block shows the arrangement for two satellites. - -\begin{verbatim} -#SATELLITES -2 nSats -grace.sat SatFile1 -1 DtPlot1 -champ.sat SatFile2 -1 DtPlot2 -\end{verbatim} - -\subsubsection{APPENDFILES} -\label{appendfiles.sec} - -GITM defaults to creating many output files for satellite runs, but this option tells GITM to create just one single file per satellite. This makes GITM output significantly less files. In the future, this option may be available for other types of output as well. - -\begin{verbatim} -#APPENDFILES -(logical) DoAppendFiles -\end{verbatim} - -\subsubsection{SAVEPLOT} -\label{saveplot.sec} - -This input option specifies the types of files GITM will output. The most common type is 3DALL, which outputs all primary state variables. Types (specified in OutputType) include : 3DALL, 3DMAG, 3DNEU, 3DION, 3DTHM, 3DCHM, 3DUSR, 3DGLO, 2DGEL, 2DMEL, 2DUSR, 2DTEC, 1DALL, 1DGLO, 1DTHM, 1DNEW, 1DCHM, 1DCMS, and 1DUSR. These file types specify the number of dimensions (3D, 2D, 1D) in which GITM may be run and the different primary state variables that are included in the output (NEU stands for neutrals, ION stands for ionosphere, MAG stands for magnetic field, THM stands for thermosphere, CHM stands for chemistry, USR stands for BLAH, GLO stands for day glow, TEC stands for total electron content, GEL stands for global electric BLAH, and MEL stands for BLAH). Any number of output files greater than zero may be produced, but nOutputTypes must be used to specify the number of types to be created and an OutputType and DtPlot must be provided for each output just as was done for multiple satellites. DtRestart and DtPlot specify the time-step in seconds for producing restart and output files, respectively. If no output files are specified, GITM will crash when attempting to finalize all procedures. - -\begin{verbatim} -#SAVEPLOT -(real) DtRestart -(integer) nOutputTypes -(string) OutputType -(real) DtPlot -\end{verbatim} -\vspace{-.1in} -\hspace{.6in} $\vdots$ -\vspace{.1in} - -\subsubsection{CCMCFILENAME} -\label{ccmcfilename.sec} - -The Community Coordinated Modeling Center (CCMC), located at {\tt ccmc.gsfc.nasa.gov}, provides access to space research models to the scientific community. GITM provides the option to have the GITM output files use the CCMC naming convention: TYPE\_GITM\_YYYY-MM-DDThh-mm-ss.bin, where TYPE is one of the GITM output types such as 3DALL described in the previous subsection. - -\begin{verbatim} -#CCMCFILENAME -(logical) Use CCMC naming convention -\end{verbatim} - -\subsubsection{PLOTTIMECHANGE} -\label{plottimechange.sec} - -This option allows you to change the output cadence of the files for a limited time. If you have a short event, such as a solar flare or an eclipse, this options lets you output much more often during the event than during the quiet periods preceding and succeeding the event. - -\begin{verbatim} -#PLOTTIMECHANGE -(yyyy mm dd hh mm ss ms) PlotTimeChangeStart -(yyyy mm dd hh mm ss ms) PlotTimeChangeEnd -\end{verbatim} - -%% - - -\subsection{Restart Input} - -This section deals with options typically only specified in a restart header. These options can be used in the principle input file but have very little use if a run does not need to be restarted from a specified point in a previous run. Apart from setting the flag in the {\tt UAM.in} file, several steps must be taken. First, you need to put the restart files that GITM writes into the correct location. These files are located in subdirectories (named {\tt restartIN} and {\tt restartOUT}) within the {\tt run/UA} directory. To preserve the past GITM restart information and enable a new start from the end of the previous run, prepare these directories as directed below. This code snippit can also be added to a PBS job file, but should only be performed after GITM has finished executing and if the {\tt GITM.DONE} file exists. - -\begin{verbatim} -cd UA -mv restartOUT restartOUT.runname.XX -mkdir restartOUT -./pGITM -rm -f restartIN; ln -s restartOUT.runname.XX -cd .. -\end{verbatim} - -\subsubsection{RESTART} - -Setting this input option to T (true) allows the model to restart from a previous run. - -\begin{verbatim} -#RESTART -(logical) DoRestart -\end{verbatim} - -\subsubsection{ISTEP} -\label{istep.sec} - -This input should not be specified by the user, but is used by the computer to restart after a run has been interrupted. It gives the iteration number that the model run stopped at. - -\begin{verbatim} -#ISTEP -(integer) iStep -\end{verbatim} - -\subsubsection{TSIMULATION} - -This options sets the offset from the starting time (specified using TIMESTART) to the current simulation time in seconds. Like ISTEP, this option should really only be used by the computer to restart after a run has been interrupted. - -\begin{verbatim} -#TSIMULATION -(real) tsimulation -\end{verbatim} - -%% - -\subsection{Numerical Options} -\label{numerical.sec} - -The optional inputs in this section allow the user to modify how GITM handles computational scenarios. - -\subsubsection{LIMITER} -\label{limiter.sec} - -The flux limiter specifies the balance between the model's ability to run robustly and provide realistic gradients. A realistic atmosphere will occasionally experience sharp changes in characteristics such as electron density. When GITM attempts to model these variations, the high resolution of the temporal and spatial grids allows the numerical schemes that solve the equations of state to oscillate about the actual value. One solution to the problem is to err on the side of robustness and require more gradual changes. This can be done by setting TypeLimiter to minmod or setting TypeLimiter to beta and BetaLimiter to 1.0 (both of these options are the same and the default). The other solution is to allow sharp changes to occur, realizing that the model will likely overshoot and undershoot and that if an atmospheric characteristic shoots to an unrealistic value the model may crash. - -Although there are many different limiter types (see the wikipedia article for a decent introduction: {\tt \\http://en.wikipedia.org/wiki/Flux\_limiter}) GITM uses the Osher function~\citep{Chakravarthy:1983os}, given below in equation~\ref{os.eq}. - -\begin{equation} -\label{os.eq} -\phi_{os}(r) = max[0,min(r,\beta)], \;\;\;\; (1 \le \beta \le 2); \;\;\;\; \lim_{r\to\infty} \phi_{os}(r) = \beta -\end{equation} - -In this function, $\beta$ is specified by BetaLimiter, and so defaults to the minmod flux limiter function when $\beta = 1$~\citep{roe:1986aa} and to the monotonized central (MC) flux limiter function when $\beta = 2$~\citep{valLeer:1977aa}. - -\begin{verbatim} -#LIMITER -(string) TypeLimiter -(real) BetaLimiter -\end{verbatim} - -\subsection{Data Assimilation} -\label{assim.sec} - -This section contains the input options that allow GITM to perform data assimilation. - -\subsubsection{RCMR} -\label{rcmr.sec} - -RCMR stands for Retrospective Cost Model Reference, and is a Retrospective Cost Adaptive Control (RCAC) method of data assimilation. RCMR is useful when dealing with nonlinear systems~\citep{Ali:2012aa}. To use this system, Markov parameters need to be set. These parameters will vary based on the type and number of data sources being assimilated and the driver being estimated. Markov parameters for the assimilation of a single satellite providing neutral density to drive the F$_{10.7}$ are currently available. Other parameters are currently being developed. - -The use of RCMR changes how the possible driving parameters and satellite data are treated within GITM. Because of this, the RCMR block should be included before the SATELLITE, F107, and PHOTOELECTRON block in the UAM.in file. The initial guess of the parameter being driven should not be close to the final value, as a perturbed location allows the assimilation to better account for model error. Choosing a value within realistic physical boundaries but away from an intuitive guess as to the actual value is the best way to chose the initial guess. - -\begin{verbatim} -#RCMR -(string) Input data type (RHO/VTEC) -(string) Output variable to drive (F107/PHOTOELECTRON) -(real) Initial output estimate -(integer) Number of satellites to include in data assimilation -(integer) Index number of satellite to assimilate -\end{verbatim} - -\subsubsection{DART} -\label{dart.sec} - -DART stands for Data Assimilation Research Testbed, and is a community facility that provides software tools for data assimilation~\citep{Anderson:2009fn}. Within the space physics community, DART has been coupled with TIE-GCM and GITM. More information about using DART with GITM is available in the DART manual in the {\tt GITM2/srcDoc} directory. - -\begin{verbatim} -#DART -(integer) Method to use DART -\end{verbatim} - -\subsection{Solar and Geomagnetic Indices} -\label{indices.sec} - -This section contains the input options that specifies the level of solar and geomagnetic activity. Recall that these input options must be specified after the starting and ending times (refer to section~\ref{required.sec}) are defined. Also, note that several of these indices may be specified in different ways. If you use more than one method to define an index, the last definition will be used. It is better to just use one method in your {\tt UAM.in} file to avoid confusion. - -\subsubsection{F107} -\label{f107.sec} - -Sets the F$_{10.7}$ and 81 day average of F$_{10.7}$ (commonly denoted as F$_{10.7a}$ or $\overline{F_{10.7}}$). This is used to set the range of the initial altitude grid and drive the lower boundary conditions. It is also used as input into several of the models called by GITM. If RCMR is being used to drive the F$_{10.7}$, then the values provided here are used to initialize MSIS and should be as close to the real F$_{10.7}$ as possible. - -The F$_{10.7}$ is a measure of the solar 10.7 cm flux~\citep{Covington:1948aa} and is measured in solar flux units (1 sfu = 10$^{-22}$ W m$^{-2}$ Hz$^{-1}$ = 10,000 jansky). The F$_{10.7}$ is commonly used as a proxy for the solar EUV output. - -\begin{verbatim} -#F107 -(real) f107 -(real) f107a -\end{verbatim} - -\subsubsection{NGDC\_INDICES} -\label{ngdc_indices.sec} - -This input option allows GITM to use an appropriate F$_{10.7}$ for each day that the assimilation runs, instead of a fixed value. This is accomplished by providing an input file that contains the F$_{10.7}$ values for the entire GITM simulation period and the preceding 81 days. This allows GITM to compute the appropriate daily F$_{10.7a}$ as well. Typically, users simply make a file including all F$_{10.7}$ values from 1980 onward, so they never have to worry about missing any preceding days. - -\begin{verbatim} -#NGDC_INDICES -(string) filename -\end{verbatim} - -\subsubsection{SME\_INDICES} -\label{sme_indices.sec} - -This option is not well described in set\_inputs.f90. - -\begin{verbatim} -#SME_INDICES -(string) Mystery input number one -(string) Mystery input number two -\end{verbatim} - -\subsubsection{ACE\_DATA} -\label{ace_data.sec} - -This option is not well described in set\_inputs.f90. - -\begin{verbatim} -#ACE_INDICES -(string) Mystery input number one -(string) Mystery input number two -\end{verbatim} - -\subsubsection{SWPC\_DATA} -\label{swpc_data.sec} - -This option is not well described in set\_inputs.f90. - -\begin{verbatim} -#SWPC_INDICES -(string) Mystery input number one -(string) Mystery input number two -\end{verbatim} - -\subsubsection{NOAAHPI\_INDICES} -\label{noaahpi_indices.sec} - -\begin{verbatim} -#NOAAHPI_INDICES -(string) NOAA HPI filename -\end{verbatim} - -\subsubsection{KP} -\label{kp.sec} - -The Kp index is not used by GITM, but several models that GITM calls utilize it. The Kp index is a measure of mid-latitude geomagnetic disturbance and can be obtained from: - - {\tt ftp://ftp.ngdc.noaa.gov/STP/GEOMAGNETIC\_DATA/INDICES/KP\_AP/} - - \noindent while a description of the index can be found at: - - {\tt http://www-app3.gfz-potsdam.de/kp\_index/description.html} - -\begin{verbatim} -#KP -(real) kp -\end{verbatim} - -\subsubsection{HEMISPHERICPOWER} -\label{hemisphericpower.sec} - -This option sets the hemispheric power of the aurora. Typical values range from 1$-$1000, with 20 being a nominal, quiet time value. - -\begin{verbatim} -#HPI -(real) HemisphericPower -\end{verbatim} - -\subsubsection{SOLARWIND} -\label{solarwind.sec} - -This option is one way to set the driving conditions for the high-latitude electric field models. Because this option is static and will not change during the run, it is usually better to use the MHD\_INDICES option instead, as MHD\_INDICES provides a dynamic driving environment. - -\begin{verbatim} -#SOLARWIND -(real) bx -(real) by -(real) bz -(real) vx -\end{verbatim} - -\subsubsection{MHD\_INDICES} -\label{mhdindices.sec} - -Use this option to provide GITM with dynamic IMF and solar wind conditions. This option can either be omitted entirely; if it is desired a filename whose contents will be discussed in more detail in section~\ref{imf.sec} must be specified. This file should be located in the same directory as the {\tt UAM.in} file. - -\begin{verbatim} -#MHD_INDICES -(string) filename -\end{verbatim} - -\subsubsection{EUV\_DATA} -\label{euv.sec} - -This input option allows the user to specify the extreme ultraviolet (EUV) flux using solar spectra from any model or data source. A FISM file~\citep{fism:2007d, fism:2008f} is used as an example in section~\ref{solar_irradiance.sec}. - -\begin{verbatim} -#EUV_DATA -(logical) UseEUVData -(string) cEUVFile -\end{verbatim} - -%% - -\subsection{Physical Processes} -\label{physics.sec} - -The following options let the user specify how GITM treats different physical boundaries and processes. - -\subsubsection{INITIAL} -\label{initial.sec} - -This option specifies the initial conditions and the lower boundary conditions. For Earth, we typically just use MSIS and IRI for initial conditions. For other planets, the vertical temperature parameters can be set here. TempMin and TempMax specify the initial temperatures at the bottom and top of the thermosphere in Kelvin, respectively. TempHeight specifies the height (in kilometers from the surface of the planet) of the midpoint of the temperature gradient. TempWidth specifies the vertical width (in kilometers) of the temperature gradient. - -\begin{verbatim} -#INITIAL -(logical) UseMSIS -(logical) UseIRI -If UseMSIS is false (F) then: -(real) TempMin -(real) TempMax -(real) TempHeight -(real) TempWidth -\end{verbatim} - -\subsubsection{STATISTICALMODELSONLY} -\label{statisticalmodelsonly.sec} - -There can be benefits to running a simpler ionosphere and thermosphere models. GITM can be used as a shell to run MSIS and IRI without any coupling. This input option bypasses GITM and only outputs results from MSIS and IRI. This option allows the user who is familiar with GITM to get MSIS and IRI output without having to install or know how to run these models independently. The UseStatisticalModelsOnly flag can be set to {\tt T} or {\tt F} (true or false) and the DtStatisticalModels options lets you specify the time-step (in seconds) used in MSIS and IRI. - -This can also be used for geo-Apex conversions (if \#APEX is T), or to run the selected auroral \& potential models (set in \#ELECTRODYNAMICS). By default, 2DGEL (the "electrodynamics outputs") are on a geographic grid. To instead output on a magnetic grid, set \#APEX to F, and put 0.0 for all options in \#DIPOLE. - -\begin{verbatim} -#STATISTICALMODELSONLY -(logical) UseStatisticalModelsOnly -(real) DtStatisticalModels -\end{verbatim} - -\subsubsection{TIDES} -\label{tides} - -This option uses a series of logical flags to tell GITM how to use tides. The first flag (UseMSISFlat) tells GITM to use MSIS without tides. The second flag (UseMSISTides) is using MSIS with full up tides. One of these two flags should be true. The remaining flags should only be true if UseMSISTides is false, and then only one should be true. The third flag (UseGSWMTides) uses GSWM tides, while the forth flag (UseWACCMTides) sets GITM to use the WACCM tides. Essentially, only one tidal model should be used per GITM run. Information about GSWM can be found at: \\{\tt http://www.hao.ucar.edu/modeling/gswm/gswm.html} and information about WACCM can be found at: \\{\tt http://www.cesm.ucar.edu/working\_groups/WACCM/}. - -When running with the MSIS or WACCM tides, no additional input files are needed. However, when using GSWM additional files must be made accessible to GITM in the {\tt run/UA/DataIn} directory. These files are stored in the {\tt Tides} directory within GITM. You can check these files out using CVS (as described in Chapter~\ref{cvs.sec}) and then create links or copy them into your run directory by using: {\tt ln -s ~/GITM/Tides/*bin ~/GITM/run/UA/DataIn/.} - -\begin{verbatim} -#TIDES -(logical) UseMSISFlat -(logical) UseMSISTides -(logical) UseGSWMTides -(logical) UseWACCMTides -\end{verbatim} - -\subsubsection{DUSTDATA} -\label{dustdata.sec} - -\begin{verbatim} -#DUSTDATA -(logical) UseDustDistribution -(string) cDustFile -(string) cConrathFile -\end{verbatim} - -\subsubsection{DUST} -\label{dust.sec} - -\begin{verbatim} -#DUST -(real) Total $\tau$ -(real) Conrnu -\end{verbatim} - -\subsubsection{GSWMCOMP} -\label{gswmcomp.sec} - -If you decided to use GSWM tides by selecting UseGSWMTides in the TIDES option, you can specify which diurnal and semidiurnal tidal components to include. - -\begin{verbatim} -#GSWMCOMP -(logical) GSWMdiurnal(1) -(logical) GSWMdiurnal(2) -(logical) GSWMsemidiurnal(1) -(logical) GSWMsemidiurnal(2) -\end{verbatim} - -\subsubsection{USEPERTURBATION} -\label{useperturbation.sec} - -\begin{verbatim} -#USEPERTURBATION -(logical) UsePerturbation -\end{verbatim} - -\subsubsection{DAMPING} -\label{damping.sec} - -This option specifies whether or not to allow damping of the vertical wind oscillations that can occur in the lower atmosphere. - -\begin{verbatim} -#DAMPING -(logical) UseDamping -\end{verbatim} - -\subsubsection{GRAVITYWAVE} -\label{gravitywave.sec} -A switch to add heating to the atmosphere. This was primarily used to explore gravity waves on Titan and has little to no effect on the terrestrial atmosphere. This options defaults to false. - -\begin{verbatim} -#GRAVITYWAVE -(logical) UseGravityWave -\end{verbatim} - -\subsubsection{ELECTRODYNAMICS} -\label{edynamics.sec} -This is where the desirec Aurora and Potential models are set, along with the time delta the inputs should be specified. - -GITM uses an external library for Electrodynamics, which is downloaded automatically when running Config.pl. The documentation for that library may have more information on the available options than this document. - -Available auroral models are: zero (none), FTA, FRE/IHP, PEM, OVATION, or AMIE (from file). - -Available potential models are: zero (none), Weimer05, Millstone, HeppnerMaynard, or AMIE (from file) - -Defaults are FTA and Weimer05, both updated every 60.0 seconds. Tu use AMIE files, make sure to set \#AMIEFILES too. - -\begin{verbatim} - #ELECTRODYNAMICS - (string) AuroralModel - (real) DtAurora - (string) PotentialModel - (real) DtPotential -\end{verbatim} - - -\subsubsection{AURORAMODS} -\label{auroramods.sec} - -This is for modifying the aurora a bit. TheNormalizeAuroraToHP variable calculates the modeled hemispheric power and then normalizes it to the hemispheric power read in. AveEFactor - changes the aveE of the aurora by this factor. IsKappaAurora - use a kappa instead of Maxwellian? AuroraKappa - kappa to use in the distribution. AllowAurWODiffuse: allow other auror types if diffuse is zero? MaxAveEAurora - Maximum allowed value of AvgE. - - - -\begin{verbatim} -#AURORAMODS -(logical) Normalize Aurora to Hemispheric Power -(real) AveEFactor -(logical) IsKappaAurora -(real) AuroraKappa -(logical) AllowAurWODiffuse -(real) MaxAveEAurora -\end{verbatim} - -\subsubsection{AURORATYPES} -\label{newellauroratypes.sec} - -This input option provides several logical flags that allow GITM to use different auroral types (currently only supported by Pat Newell's aurora model, Ovation~\citep{Newell:2002ov}). - -\begin{verbatim} -#AURORATYPES -(logical) UseDiffuseAurora [true] -(logical) UseMonoAurora -(logical) UseWaveAurora -(logical) UseIonAurora -\end{verbatim} - -% \subsubsection{OVATION} -% \label{ovation.sec} - -% This input option provides several logical flags that allow GITM to use the SME Ovation model. - -% \begin{verbatim} -% #OVATION -% (logical) UseOvationSME -% (logical) UseOvationSMEMono -% (logical) UseOvationSMEWave -% (logical) UseOvationSMEIon -% \end{verbatim} - -\subsubsection{AMIEFILES} -\label{amiefiles.sec} - -This option allows the user to specify the electrodynamic state of the polar regions using the Assimilative Mapping of Ionospheric Electrodynamics (AMIE) model~\citep{ridley:2004aa}. Input files separately specify the conditions at the northern and southern polar caps, and should be in the AMIE binary format. Contact Aaron Ridley for more information about using AMIE with GITM. - -\begin{verbatim} -#AMIEFILES -(string) cAMIEFileNorth -(string) cAMIEFileSouth -\end{verbatim} - -\subsubsection{THERMO} -\label{thermo.sec} - -This input option sets flags that allow the user to turn various thermospheric processes on and off. For a realistic run, all three heating flags (for solar, Joule, and auroral heating) should be set to true, along with both cooling flags (for nitrous-oxide, NO, and oxygen, O). UseConduction, UseUpdatedTurbulentCond, and UseTurbulentCond flag should also all be set to true. UseDiffusion, however, defaults to false and should not be used for a realistic run. - -The only keyword that is not a flag is EddyScaling. This allows the user to control the Eddy diffusion by applying a multiplicative to the model's Eddy diffusion value. - -\begin{verbatim} -#THERMO -(logical) UseSolarHeating -(logical) UseJouleHeating -(logical) UseNOCooling -(logical) UseOCooling -(logical) UseConduction -(logical) UseTurbulentCond -(logical) UseUpdatedTurbulentCond -(logical) UseDiffusions -(real) EddyScaling -\end{verbatim} - -\subsubsection{THERMALDIFFUSION} -\label{thermaldiffusion.sec} - -This keyword sets the thermal conductivity. KappaTemp0 should be set to the desired value of the thermal conductivity in MKS units. - -\begin{verbatim} -#THERMALDIFFUSION -(real) KappaTemp0 -\end{verbatim} - -\subsubsection{VERTICALSOURCES} -\label{verticalsources.sec} - -This input option provides flags and limits for the vertical thermospheric sources. The UseEddyInSolver turns the Eddy diffusion on and off, the UseNeutralFrictionInSolver turns the vertical neutral friction on and off, and the MaximumVerticalVelocity sets the limit for vertical neutral winds in meters per second. - -\begin{verbatim} -#VERTICALSOURCES -(logical) UseEddyInSolver -(logical) UseNeutralFrictionInSolver -(real) MaximumVerticalVelocity -\end{verbatim} - -\subsubsection{EDDYVELOCITY} -\label{eddyvelocity.sec} - -This input option further allows the user to specify how Eddy diffusion is treated by providing an flag to use the method presented by~\citet{Boqueho:2005aa}, which was developed for the Martian atmosphere. The UseEddyCorrection flag is another option that is useful for certain extraterrestrial atmospheres. - -\begin{verbatim} -#EDDYVELOCITY -(logical) UseBoquehoAndBlelly -(logical) UseEddyCorrection -\end{verbatim} - -\subsubsection{DIFFUSION} -\label{diffusion.sec} - -If you use Eddy diffusion, as indicated by the UseDiffusion flag, you must specify two pressure levels in units of UNITS using EddyDiffusionPressure[0,1]. Below the first pressure level, the Eddy diffusion will be constant. Between the first and the second pressure levels, the Eddy diffusion coefficient will drop-off linearly. Thus, the first pressure must be larger than the second! The Eddy diffusion coefficient may also be specified using EddyDiffusionCoef. - -\begin{verbatim} -#DIFFUSION -(logical) UseDiffusion -(real) EddyDiffusionCoef -(real) EddyDiffusionPressure0 -(real) EddyDiffusionPressure1 -\end{verbatim} - -\subsubsection{WAVEDRAG} -\label{wavedrag.sec} - -This input option allows stress heating to be applied in GITM, providing an additional source of drag in the thermosphere. - -\begin{verbatim} -#WAVEDRAG -(logical) UseStressHeating -\end{verbatim} - -\subsubsection{FORCING} -\label{forcing.sec} - -This input option provides flags for physical processes that drive the thermosphere. - -\begin{verbatim} -#FORCING -(logical) UsePressureGradient -(logical) UseIonDrag -(logical) UseNeutralFriction -(logical) UseViscosity -(logical) UseCoriolis -(logical) UseGravity -\end{verbatim} - -\subsubsection{IONFORCING} -\label{ionforcing.sec} - -This input option turns several ionospheric transport processes on and off. UseExB turns the {\bf E}$\times${\bf B} plasma drift on and off, UseIonGravity allows the user to determine whether or not to allow the ions to respond to gravity, UseNeutralDrag relegates the forcing from ion-neutral collisions on the ionosphere, and UseIonPressureGradient deals with the ion motions resulting from changes to the plasma pressure gradient. All of these processes should be on for a realistic simulation. - -\begin{verbatim} -#IONFORCING -(logical) UseExB -(logical) UseIonPressureGradient -(logical) UseIonGravity -(logical) UseNeutralDrag -\end{verbatim} - -\subsubsection{CHEMISTRY} - -Turn certain chemical processes on or off. All processes are included by default. - -\begin{verbatim} -#CHEMISTRY -(logical) UseIonChemistry -(logical) UseIonAdvection -(logical) UseNeutralChemistry -\end{verbatim} - -\subsubsection{PHOTOELECTRON} -\label{photoelectron.sec} - -The photoelectron heating efficiency describes the energy input to the electron gas per electron-ion pair formed by the photoionization of a neutral~\citep{Hanson:1968ue}. GITM defines the photoelectron heating efficiency as a scalar that multiplies the sum of the photoionization rate and the neutral density for each neutral species. The specified value should lie between 0.02 and 0.20, though the default value is zero. If RCMR is being used to drive the photoelectron heating efficiency, this block is ignored. - -\begin{verbatim} -#PHOTOELECTRON -(real) Photoelectron heating efficiency -\end{verbatim} - -\subsubsection{DYNAMO} -\label{dynamo.sec} - -This input option provides flags for the ionospheric dynamo. The UseDynamo flag turns on a model to calculate the ionospheric electric fields. DynamoHighLatBoundary sets the polar latitude limit (65$^\circ$ or 70$^\circ$ is a realistic limit), nItersMax sets the maximum number of iterations for the Dynamo convergence (typically set at 500), and the MaxResidual sets the maximum difference, in Volts, to allow between iterations before the value is said to have converged (typically set to 1 V). The Dynamo currently uses a static high-latitude boundary, though a dynamical one would be ideal. To get around this, input from AMIE, run using the SuperMag data network, can be used instead of the UseDynamo process. The use of AMIE input is discussed in section~\ref{amiefiles.sec}. - -\begin{verbatim} -#DYNAMO -(logical) UseDynamo -(real) DynamoHighLatBoundary -(integer) nItersMax -(real) MaxResidual -\end{verbatim} - -\subsubsection{LTERADIATION} -\label{lteradiation.sec} - -LTERadiation allows the user to specify the time-step for the local thermodynamic equilibrium radiation process in seconds. This option is typically only used by the Mars GITM. It may be set for other versions of GITM, but each planet treats this input option differently. Versions not compiled for Mars will either modify or ignore input from LTERadiation. - -\begin{verbatim} -#LTERadiation -(real) DtLTERadiation -\end{verbatim} - -\subsubsection{DIPOLE} -\label{dipole.sec} - -This input option allows the user to specify the parameters the geomagnetic field within the limits of a dipole configuration so that any configuration (centered, tilted, or off-center and tilted) may be used. x,y,zDipoleCenter specify the origin of the dipole field in ECI coordinates, MagneticPoleTilt gives the angle (in degrees) between the dipole axis and the terrestrial rotation axis, and MagneticPoleRotation gives the constant angular rate (in degrees) at which the geomagnetic dipole field rotates. - -\begin{verbatim} -#DIPOLE -(real) MagneticPoleRotation -(real) MagneticPoleTilt -(real) xDipoleCenter -(real) yDipoleCenter -(real) zDipoleCenter -\end{verbatim} - -\subsubsection{APEX} -\label{apex.sec} - -This input option indicates whether or not GITM should use the more realistic Apex geomagnetic field~\citep{richards:1995aa}. If this option is set to false, the dipole field specified in the previous subsection will be used. - -\begin{verbatim} -#APEX -(logical) UseApex -\end{verbatim} - -%% - -\subsection{Geographic Boundaries} -\label{geograph.sec} - -\subsubsection{TOPOGRAPHY} - -This input option, which is defaults to false, uses topography to provide a variable vertical grid in GITM. You can also specify the minimum altitude at which the vertical grid for the thermosphere and ionosphere become consistent (AltMinUniform and AltMinIono, respectively). As with all other inputs the altitudes should be given in kilometers from the surface of the planet. - -\begin{verbatim} -#TOPOGRAPHY -(logical) UseTopography -(real) AltMinUniform -(real) AltMinIono -\end{verbatim} - -\subsubsection{ALTITUDE} -\label{altitude.sec} - -The upper and lower altitude limits (in kilometers) may be specified here. These values default to 500 km and 95 km, respectively. Setting the altitude limits above or below these values may result in unstable model runs. - -UseStretchedAltitude may also be turned on and off here. This flag defaults to true, as it allows the altitudes with rapidly changing pressure levels to be treated in more detail than those where the atmosphere changes slowly with altitude. - -\begin{verbatim} -#ALTITUDE -(real) AltMin -(real) AltMax -(logical) UseStretchedAltitude -\end{verbatim} - -\subsubsection{GRID} -\label{input_grid.sec} - -This input option sets the grid resolution in GITM. Although this process is straightforward, it deserves some thought and discussion. This is provided in section~\ref{grid.sec}. For new GITM users, learning how to alter the grid is a good place to start moving beyond the test run shown in Chapter~\ref{intro.ch}. - -\begin{verbatim} -#GRID -(integer) nBlocksLon -(integer) nBlocksLat -(real) LatStart -(real) LatEnd -(real) LonStart -(real) LonEnd -\end{verbatim} - -\subsubsection{STRETCH} - -You can stretch the grid in GITM in the latitudinal direction. It takes some practice to get the stretching just the way that you might like. To do this, you need to specify the geographic latitude (in degrees) that the stretching will center at (ConcentrationLatitude), the fraction of stretch (StretchingPercentage) where 0 means that there will be no stretching and 1 means that the latitude will be stretched by 100\%, and a multiplicative factor (StretchingFactor) that helps scale the stretching. The StretchingFactor should range between 0 and 1, erring closer to 1 to provide more control. - -\begin{verbatim} -#STRETCH -(real) ConcentrationLatitude -(real) StretchingPercentage -(real) StretchingFactor -\end{verbatim} - -Here is an example for stretching near the equator: - -\begin{verbatim} -#STRETCH -0.0 ! Equator -0.7 ! Amount of stretching is great -0.8 ! more control -\end{verbatim} - -Here is another example for no stretching near the auroral oval: - -\begin{verbatim} -#STRETCH -65.0 ! Location of minimum grid spacing -0.0 ! There is no streching here -1.0 ! For control -\end{verbatim} - -\subsubsection{NEWSTRETCH} -\label{newstretch.sec} - -An alternative way to stretch the grid. - -\begin{verbatim} -#NEWSTRETCH -(real) Poleward edge of the stretch region (degrees) -(real) Stretching width (degrees) -(real) Stretching percentage (0.0-1.0) -\end{verbatim} - -Here is an example for stretching near the auroral zone: - -\begin{verbatim} -#NEWSTRETCH -65.0 ! Auroral oval -5.0 ! Width of the stretched region -0.6 ! Amount of stretch (0 = none, 1 = lots) -\end{verbatim} diff --git a/srcPython/gitm_plot_simple.py b/srcPython/gitm_plot_simple.py new file mode 100755 index 00000000..3d9fcd53 --- /dev/null +++ b/srcPython/gitm_plot_simple.py @@ -0,0 +1,414 @@ +#!/usr/bin/env python3 +""" Standard model visualization routines +""" + +import matplotlib as mpl +mpl.use('Agg') +import matplotlib.pyplot as plt +import numpy as np +import argparse + +from pylab import cm +from gitm_routines import * + +def get_args(): + + parser = argparse.ArgumentParser( + description = 'Plot Aether / GITM model results') + + parser.add_argument('-list', \ + action='store_true', default = False, \ + help = 'list variables in file') + + parser.add_argument('-var', \ + default = 3, type = int, \ + help = 'variable to plot (number)') + + parser.add_argument('-cut', metavar = 'cut', default ='alt', \ + choices = ['alt', 'lat', 'lon'], + help = 'alt,lat,lon : which cut you would like') + + parser.add_argument('-alt', metavar = 'alt', default = 250.0, \ + help = 'altitude : alt in km (closest)') + parser.add_argument('-lat', metavar = 'lat', default = 0.0, \ + help = 'latitude : latitude in degrees (closest)') + parser.add_argument('-lon', metavar = 'lon', default = 0.0,\ + help = 'longitude in degrees (closest)') + + parser.add_argument('-log', default = False, + action="store_true", + help = 'plot the log of the variable') + + parser.add_argument('-mini', default = 1e32, type = float, \ + help = 'manually set the minimum value for the plots') + parser.add_argument('-maxi', default = -1e32, type = float, \ + help = 'manually set the maxiumum value for the plots') + + parser.add_argument('filelist', nargs='+', \ + help = 'list files to use for generating plots') + + args = parser.parse_args() + + return args + +# ---------------------------------------------------------------------------- +# get header info from a file +# ---------------------------------------------------------------------------- + +def get_file_info(args): + + header = read_gitm_header(args.filelist) + header['vars'] = remap_variable_names(header['vars']) + + return header + +# ---------------------------------------------------------------------------- +# list the variables in the header +# ---------------------------------------------------------------------------- + +def list_vars(header): + for k, v in header.items(): + if (k != 'vars'): + print(k, '-> ', v) + else: + print('vars : ') + for i, var in enumerate(v): + print(i, var) + return + +# ---------------------------------------------------------------------------- +# Read in data from the files: +# ---------------------------------------------------------------------------- + +def read_in_model_files(filelist, varlist): + + # first read in spatial information: + vars = [0, 1, 2] + spatialData = read_gitm_one_file(filelist[0], vars) + + lons = np.degrees(spatialData[0]) # Convert from rad to deg + nLons = len(lons[:, 0, 0]) + lats = np.degrees(spatialData[1]) # Convert from rad to deg + nLats = len(lats[0, :, 0]) + alts = spatialData[2] / 1000.0 # Convert from m to km + nAlts = len(alts[0, 0, :]) + + nTimes = len(filelist) + nVars = len(varlist) + if (nVars == 1): + allData = np.zeros((nTimes, nLons, nLats, nAlts)) + else: + allData = np.zeros((nTimes, nVars, nLons, nLats, nAlts)) + allTimes = [] + for iTime, filename in enumerate(filelist): + data = read_gitm_one_file(filename, varlist) + allTimes.append(data["time"]) + if (nVars == 1): + allData[iTime, :, :, :] = data[varlist[0]][:, :, :] + else: + for iVar, var in enumerate(varlist): + allData[iTime, iVar, :, :, :] = data[var][:, :, :] + vars = [] + for var in varlist: + vars.append(data['vars'][var]) + + data = {'times': allTimes, + 'data': allData, + 'vars': vars, + 'lons': lons, + 'lats': lats, + 'alts': alts, + 'nTimes': nTimes, + 'nVars': nVars, + 'nLons' : nLons, + 'nLats': nLats, + 'nAlts': nAlts} + + return data + +# ---------------------------------------------------------------------------- +# take a dictionary containing all of the model data and +# return slices. The data should have the shape: +# [nTimes, nVars, nLons, nLats, nAlts] +# or +# [nTimes, nLons, nLats, nAlts] +# ---------------------------------------------------------------------------- + +def data_slice(allData3D, iLon = -1, iLat = -1, iAlt = -1): + + nTimes = allData3D['nTimes'] + nVars = allData3D['nVars'] + nLons = allData3D['nLons'] + nLats = allData3D['nLats'] + nAlts = allData3D['nAlts'] + + if (nVars > 1): + if (iAlt > -1): + slices = np.zeros((nTimes, nVars, nLons, nLats)) + slices[:, :, :, :] = allData3D['data'][:, :, :, :, iAlt] + elif (iLat > -1): + slices = np.zeros((nTimes, nVars, nLons, nAlts)) + slices[:, :, :, :] = allData3D['data'][:, :, :, iLat, :] + else: + slices = np.zeros((nTimes, nVars, nLats, nAlts)) + slices[:, :, :, :] = allData3D['data'][:, :, iLon, :, :] + else: + if (iAlt > -1): + slices = np.zeros((nTimes, nLons, nLats)) + slices[:, :, :] = allData3D['data'][:, :, :, iAlt] + elif (iLat > -1): + slices = np.zeros((nTimes, nLons, nAlts)) + slices[:, :, :] = allData3D['data'][:, :, iLat, :] + else: + slices = np.zeros((nTimes, nLats, nAlts)) + slices[:, :, :] = allData3D['data'][:, iLon, :, :] + + return slices + +#----------------------------------------------------------------------------- +# find which cut direction to make, then which cut to take +#----------------------------------------------------------------------------- + +def find_cut(args, allData): + + cutValue = -1e32 + cutString = '' + cutShort = '' + iLon = -1 + iLat = -1 + iAlt = -1 + xLabel = '' + yLabel = '' + lons1d = allData['lons'][:, 0, 0] + lats1d = allData['lats'][0, :, 0] + alts1d = allData['alts'][0, 0, :] + xRange = [0,0] + yRange = [0,0] + + if (args.cut == 'alt'): + altGoal = float(args.alt) + diff = np.abs(alts1d - altGoal) + iAlt = np.argmin(diff) + cutValue = alts1d[iAlt] + cutString = 'Alt : %d km' % int(cutValue) + cutShort = 'alt%04d_' % iAlt + xLabel = 'Longitude (deg)' + yLabel = 'Latitude (deg)' + xPos1d = lons1d + yPos1d = lats1d + xRange = [0, 360] + yRange = [-90.0, 90.0] + if (args.cut == 'lon'): + lonGoal = float(args.lon) + diff = np.abs(lons1d - lonGoal) + iLon = np.argmin(diff) + cutValue = lons1d[iLon] + cutString = 'Lon : %d deg' % int(cutValue) + cutShort = 'lon%04d_' % iLon + xLabel = 'Latitude (deg)' + yLabel = 'Altitude (km)' + xPos1d = lats1d + yPos1d = alts1d + xRange = [-90.0, 90.0] + yRange = [alts1d[2], alts1d[-3]] + if (args.cut == 'lat'): + latGoal = float(args.lat) + diff = np.abs(lats1d - latGoal) + iLat = np.argmin(diff) + cutValue = lats1d[iLat] + cutString = 'Lat : %d deg' % int(cutValue) + cutShort = 'lat%04d_' % iLat + xLabel = 'Longitude (deg)' + yLabel = 'Altitude (km)' + xPos1d = lons1d + yPos1d = alts1d + xRange = [0.0, 360.0] + yRange = [alts1d[2], alts1d[-3]] + + cut = {'iLon': iLon, + 'iLat': iLat, + 'iAlt': iAlt, + 'cutValue': cutValue, + 'cutString': cutString, + 'cutShort': cutShort, + 'xLabel': xLabel, + 'yLabel': yLabel, + 'xRange': xRange, + 'yRange': yRange, + 'xPos': xPos1d, + 'yPos': yPos1d} + + return cut + +# ---------------------------------------------------------------------------- +# This function calculates the edges of cells based on the centers of the cells +# it assumes a 1D array. +# ---------------------------------------------------------------------------- + +def move_centers_to_edges(pos): + edges = (pos[1:] + pos[:-1])/2 + dpLeft = pos[1] - pos[0] + dpRight = pos[-1] - pos[-2] + edges = np.append(edges[0] - dpLeft, edges) + edges = np.append(edges, dpRight + edges[-1]) + return edges + +# ---------------------------------------------------------------------------- +# Get max and min values +# model_data is [time, xpositions, ypositions] +# ---------------------------------------------------------------------------- + +def get_min_max_data(allSlices, yPos, \ + yMin = -1e32, yMax = 1e32, \ + color = 'default', \ + minVal = 1e32, maxVal = -1e32, + isLog = False): + + symmetric = False + if (color == 'default'): + cmap = mpl.cm.plasma + if (color == 'red'): + cmap = mpl.cm.YlOrRd + + mask = ((yPos >= yMin) & (yPos <= yMax)) + if (mask.max()): + doPlot = True + maxi = allSlices[:, :, mask].max() * 1.01 + mini = allSlices[:, :, mask].min() * 0.99 + + if ((mini < 0.0) and (not isLog)): + symmetric = True + cmap = mpl.cm.bwr + maxi = abs(allSlices[:, :, mask]).max() * 1.05 + mini = -maxi + + else: + doPlot = False + mini = -1.0 + maxi = 1.0 + + if (minVal < 1e31): + mini = minVal + if (maxVal > -1e31): + maxi = maxVal + + min_max_data = {'mini' : mini, + 'maxi' : maxi, + 'cmap' : cmap, + 'symmetric' : symmetric, + 'doPlot': doPlot, + 'mask': mask} + + return min_max_data + +# ---------------------------------------------------------------------------- +# Plot a series of slices +# allSlices: 3D - [time, xpositions, ypositions] +# xPosEdges: 1D - [xpositions] (edges of cells, not centers) +# yPosEdges: 1D - [ypositions] (edges of cells, not centers) +# dataMinMax: dictionary that contains info on min, max, and color map +# varName: puts this string on the colorbar +# titleAddOn: puts this string after the time on the title +# xLabel: string label for the x axis +# yLabel: string label for the y axis +# filenamePrefix: string to add before time for filename (like varX_) +# xLimits: limits for the x axis - (array of 2 elements) +# yLimits: limits for the y axis - (array of 2 elements) +# dpi: dots per inch for file +# ---------------------------------------------------------------------------- + +def plot_series_of_slices(allSlices, + allTimes, + xPosEdges, + yPosEdges, + dataMinMax, + varName = '', + titleAddOn = '', + xLabel = '', + yLabel = '', + filenamePrefix = '', + xLimits = [0, 0], + yLimits = [0, 0], + dpi = 120): + + for iTime, uTime in enumerate(allTimes): + + fig = plt.figure(figsize=(10, 5.5), dpi = dpi) + ax = fig.add_axes([0.07, 0.08, 0.97, 0.87]) + + title = uTime.strftime("%d %b %Y %H:%M:%S UT") + titleAddOn + value2d = allSlices[iTime, :, :].transpose() + con = ax.pcolormesh(xPosEdges, yPosEdges, value2d, \ + cmap = dataMinMax['cmap'], \ + vmin = dataMinMax['mini'], \ + vmax = dataMinMax['maxi']) + if (xLimits[1] > xLimits[0]): + ax.set_xlim(xLimits) + if (yLimits[1] > yLimits[0]): + ax.set_ylim(yLimits) + #ax.set_aspect(1.0) + ax.set_title(title) + ax.set_xlabel(xLabel) + ax.set_ylabel(yLabel) + + cbar = fig.colorbar(con, ax = ax, shrink = 0.75, pad = 0.02) + cbar.set_label(varName, rotation=90) + + sTimeOut = uTime.strftime('%y%m%d_%H%M%S') + outFile = filenamePrefix + sTimeOut + '.png' + print(" ==> Writing file : ", outFile) + fig.savefig(outFile, dpi = dpi) + plt.close(fig) + +#----------------------------------------------------------------------------- +# Main code +#----------------------------------------------------------------------------- + +if __name__ == '__main__': + + # Get the input arguments + args = get_args() + + header = get_file_info(args) + + if (args.list): + list_vars(header) + exit() + + allData = read_in_model_files(args.filelist, [args.var]) + cut = find_cut(args, allData) + + allSlices = data_slice(allData, \ + iLon = cut['iLon'], \ + iLat = cut['iLat'], \ + iAlt = cut['iAlt']) + allTimes = allData['times'] + + # get min and max values, plus color table: + dataMinMax = get_min_max_data(allSlices, cut['yPos'], \ + color = 'red', \ + minVal = args.mini, maxVal = args.maxi) + + varName = allData['vars'][0] + if (args.log): + allSlices = np.log10(allSlices) + varName = 'log10(' + varName + ')' + dataMinMax['mini'] = np.log10(dataMinMax['mini']) + dataMinMax['maxi'] = np.log10(dataMinMax['maxi']) + sVarNum = 'var%03d_' % args.var + sFilePre = sVarNum + cut['cutShort'] + sTitleAdd = '; ' + cut['cutString'] + xEdges = move_centers_to_edges(cut['xPos']) + yEdges = move_centers_to_edges(cut['yPos']) + plot_series_of_slices(allSlices, + allTimes, + xEdges, + yEdges, + dataMinMax, + xLabel = cut['xLabel'], + yLabel = cut['yLabel'], + varName = varName, + titleAddOn = sTitleAdd, + filenamePrefix = sFilePre, + xLimits = cut['xRange'], + yLimits = cut['yRange']) diff --git a/srcPython/gitm_routines.py b/srcPython/gitm_routines.py index 76bdbcfc..78d6c6bc 100644 --- a/srcPython/gitm_routines.py +++ b/srcPython/gitm_routines.py @@ -354,8 +354,9 @@ def read_gitm_one_file(file_to_read, vars_to_read=-1): # Collect variable names. for i in range(data["nVars"]): - data["vars"].append(unpack(endChar+'%is'%(recLen),f.read(recLen))[0]) - (oldLen, recLen)=unpack(endChar+'2l',f.read(8)) + v = unpack(endChar+'%is'%(recLen),f.read(recLen))[0] + data["vars"].append(v.decode('utf-8').replace(" ","")) + (oldLen, recLen)=unpack(endChar+'2l',f.read(8)) # Extract time. (yy,mm,dd,hh,mn,ss,ms)=unpack(endChar+'lllllll',f.read(recLen)) diff --git a/version.def b/version.def new file mode 100644 index 00000000..2ae84e26 --- /dev/null +++ b/version.def @@ -0,0 +1,17 @@ +character(25), parameter :: GitmVersion = & + "20250723.0" + +character(50), parameter :: GitmVersionFull = "main-release_" // GitmVersion + + +character(50), parameter :: ElectrodynamicsVersionFull = GitmVersionFull + +character(*), parameter :: DifferentFilesGitm = & +"none" +character(*), parameter :: DifferentFilesElectrodyunamics = & +"none" + + +! This file contains version information for cases where the user has downloaded a +! "release" of GITM. Since there is no .git/ folder, we cannot extract git information. +! -> The date should be changed upon making a new release.