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Several issues with harmonisation algorithms #4

@MDijsselhof

Description

@MDijsselhof
  • NeuroHarmonize
    • SITE issues,
    • SOLUTION can be fixed with the following code in harmonizers.py after line 844 : covariates_data["SITE"] = all_data[self.site_indicator]
  • OPNested ComBat
    • anderson_ksamp error
    • SOLUTION Needs more than one feature
  • RELIEF
    • rpy2 to be installed
    • denoiseR install in driver
    • SOLUTION by creating a conda environment with r-essentials | r-base | r-denoiseR and also install rpy2 using pip install rpy2
    • Works with more than one feature

Add:
on:
push:
tags:
- 'v*'
workflow_dispatch: # Allow manual triggering

  1. create new branch
  2. commit changes and push to branch
  3. review request
  4. merge to master
  5. follow tag steps below'git tag'
    'git tag v0.2.2'
    'git push origin TAG'

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