diff --git a/.github/copilot-instructions.md b/.github/copilot-instructions.md index ab79ac9..d54d055 100644 --- a/.github/copilot-instructions.md +++ b/.github/copilot-instructions.md @@ -148,17 +148,17 @@ Example: ```json { - "Insert CRAFT prompt": { - "prefix": "craft", - "body": [ - "/* C: Context: Repo=${workspaceFolderBasename}; bioinformatics pipelines; NIH HPC (Biowulf/Helix); containers: quay.io/ccbr */", - "/* R: Rules: no PHI, no secrets, containerize, pin versions, follow style */", - "/* F: Flow: inputs/ -> results/, conf/, tests/ */", - "/* T: Tests: provide a one-line TEST_CMD and expected output */", - "", - "A: $1" - ], - "description": "Insert CRAFT prompt and place cursor at Actions" - } + "Insert CRAFT prompt": { + "prefix": "craft", + "body": [ + "/* C: Context: Repo=${workspaceFolderBasename}; bioinformatics pipelines; NIH HPC (Biowulf/Helix); containers: quay.io/ccbr */", + "/* R: Rules: no PHI, no secrets, containerize, pin versions, follow style */", + "/* F: Flow: inputs/ -> results/, conf/, tests/ */", + "/* T: Tests: provide a one-line TEST_CMD and expected output */", + "", + "A: $1" + ], + "description": "Insert CRAFT prompt and place cursor at Actions" + } } ``` diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index a6e75cc..8517aca 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -27,7 +27,7 @@ repos: # https://github.com/codespell-project/codespell/issues/1498 # Python formatting - repo: https://github.com/psf/black-pre-commit-mirror - rev: 26.3.0 + rev: 26.3.1 hooks: - id: black # R formatting