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invalidThis doesn't seem rightThis doesn't seem rightsteps/pyumiumi preprocessing stepumi preprocessing step
Description
Print a normal error message if not a single read has been matched with barcode pattern.
Lines 46 to 49 in c2285b2
| processed_fq1, processed_fq2, total_reads_count = extract_umi(fq12_chunks, | |
| fq1_pattern, | |
| fq2_pattern, | |
| args.find_in_reverse_complement) |
if not processed_fq1.size or not processed_fq2.size:
"Something happend wrong with parsing barcode from FASTQ..."Metadata
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invalidThis doesn't seem rightThis doesn't seem rightsteps/pyumiumi preprocessing stepumi preprocessing step